CSPI06G27560 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G27560
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Thioredoxin-like protein
Location	Chr6: 24199637 .. 24202399 (+)
RNA-Seq Expression	CSPI06G27560
Synteny	CSPI06G27560

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AATGAATTAACTAAGCAAACTGCCTAGTCCAAAGTGAAAAAGTCGAATGAAAATATTTGAATGAGTAAACTTATCTCGTTATGAACTCCCAAAATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGTATGCTTCAATCTCTTCTCTTCTTATTGTTTTTGCTTAATTTTCTTCAATTATTGAGTCAACCATATTAGCCCTAATTCCCTGAAATCGAAACCAATTCAATTTTATTCTCGCTTTCAGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGTTTGGAAATTTGGAATCTAATAGTTCTAGCAATCTCTTTGTTTTACATGATTATGATTTCACATTCTTCAAGTAATTAGAGCTCATGATGAAGATTCATATGATGATTCAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGTAATACTTTATGGAAATGCTTGTTTACAAGAATTTTTTGTTGTTTGAATTTGAGGAAGGTAAATAGATCTTTGTTCTTCCAGGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAACAATTTGCCAATTCAAATACTCTTTGATAGGTATTCCAGATATAGTTAGTCCATCTTATACCATATATCCAATTGTTTATTGTACTATGGACATAACTTCTTCTCTTGATAGTAAATAAGTCTTTATTTCTTCTCTTGATTGTAAATATTTGCTTTTTTATGTTAACTACTGGTGGGTTTAATGATTAAAAGAACAAGTACCCAGGTTGAATCCTTCATATTTTTGTGGTGTTCTGCAATCTTTATTTACTCAATTATGATAATCTCATTACTTTTACTTTTGTACATGTTTTGGAAAAATGAAACAAGTAATACAAGAATTGTAATTGATCAGATAAGCCGATCCCATGGCTTGGATCTGAACTTCATGTGAAGAAAATGTCCTATCGCTTGGCATGTGGCATTCCCTTAAGACGAGTGAAGAATGCTTCACATTTTTTGGAAAATGGCATTGGCATCTACAATTCTATCAATAAGGAGGTTAAAAACAATGATGACACAATATAAGATATTCCGTAGGGTACACAAATAATGGTGAAATGTAAAAGGTTAAATGTCCTACAAAAGATCTTCCTCTTCTTCTTCTTCTTCTCTTTTCACCGTGCTACATTACCCAATAAACTATTTGTTGAAGGGGAGCTTTGTTCACTTAACCAAGGATCCTGTATTGAAACTGGGGAGCTATCCATAACCTCCTCCACAGGAGGTAGATAGTCCTTATTATGGTTGTTCTCCGGCGGGATTATCAATCTCTGGCTTCCCAATCCTGCAAGCAGCCCGGCCTTCTTAATTGTTATGCCACTTATGGATCTCTCGCTTATGCTACGAGGAGATGAACAAGCTGATCCTGCAGATGATGCTCCACAAAAATGCTCCTCCATTGATGTCCATCCACTGCGTCTGATGCTTTCCAATTCCTCTGCTACTTCTGTCATTGAAGGTCTCATGTCGCTGTGGAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTATGTGGCTCGAGGAAAGGATCAATTAGTTCATCCACAGAGTTTCTCCCAATCCTATCAATGGCAAGTGCAGCTAAGTTTACTTCACTTTGGGGACGAGTGAAATCAACCACTTTCAATGCTGTTATTATCTCTACTAGGACTACTCCAAAACTATATACGTCACTTTTGTCTGAAAGATAAAAATTTTGATGGTATTGTGGATCAACGTAGCCTGGGGTTCCTTGGGGAGCTGTTGAGACGTGCGATATTTCTGTCATACCAAGTCGAGAGAGACCAAAATCTGCAACTTTTGATTTGAAACCATGATCCAGGAGTATATTGCTCGATTTGATGTCTCTGTGATATATTGGTGGGTGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTCTCGGCTGCTATAGTGAGCCGTGTTGTCCACGGGAGTCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCGTATA

mRNA sequence

AATGAATTAACTAAGCAAACTGCCTAGTCCAAAGTGAAAAAGTCGAATGAAAATATTTGAATGAGTAAACTTATCTCGTTATGAACTCCCAAAATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAACAATTTGCCAATTCAAATACTCTTTGATAGGTATTCCAGATATAGTTAGTCCATCTTATACCATATATCCAATTGTTTATTGTACTATGGACATAACTTCTTCTCTTGATAGTAAATAAGTCTTTATTTCTTCTCTTGATTGTAAATATTTGCTTTTTTATGTTAACTACTGGTGGGTTTAATGATTAAAAGAACAAGTACCCAGGTTGAATCCTTCATATTTTTGTGGTGTTCTGCAATCTTTATTTACTCAATTATGATAATCTCATTACTTTTACTTTTGTACATGTTTTGGAAAAATGAAACAAGTAATACAAGAATTGTAATTGATCAGATAAGCCGATCCCATGGCTTGGATCTGAACTTCATGTGAAGAAAATGTCCTATCGCTTGGCATGTGGCATTCCCTTAAGACGAGTGAAGAATGCTTCACATTTTTTGGAAAATGGCATTGGCATCTACAATTCTATCAATAAGGAGGTTAAAAACAATGATGACACAATATAAGATATTCCGTAGGGTACACAAATAATGGTGAAATGTAAAAGGTTAAATGTCCTACAAAAGATCTTCCTCTTCTTCTTCTTCTTCTCTTTTCACCGTGCTACATTACCCAATAAACTATTTGTTGAAGGGGAGCTTTGTTCACTTAACCAAGGATCCTGTATTGAAACTGGGGAGCTATCCATAACCTCCTCCACAGGAGGTAGATAGTCCTTATTATGGTTGTTCTCCGGCGGGATTATCAATCTCTGGCTTCCCAATCCTGCAAGCAGCCCGGCCTTCTTAATTGTTATGCCACTTATGGATCTCTCGCTTATGCTACGAGGAGATGAACAAGCTGATCCTGCAGATGATGCTCCACAAAAATGCTCCTCCATTGATGTCCATCCACTGCGTCTGATGCTTTCCAATTCCTCTGCTACTTCTGTCATTGAAGGTCTCATGTCGCTGTGGAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTATGTGGCTCGAGGAAAGGATCAATTAGTTCATCCACAGAGTTTCTCCCAATCCTATCAATGGCAAGTGCAGCTAAGTTTACTTCACTTTGGGGACGAGTGAAATCAACCACTTTCAATGCTGTTATTATCTCTACTAGGACTACTCCAAAACTATATACGTCACTTTTGTCTGAAAGATAAAAATTTTGATGGTATTGTGGATCAACGTAGCCTGGGGTTCCTTGGGGAGCTGTTGAGACGTGCGATATTTCTGTCATACCAAGTCGAGAGAGACCAAAATCTGCAACTTTTGATTTGAAACCATGATCCAGGAGTATATTGCTCGATTTGATGTCTCTGTGATATATTGGTGGGTGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTCTCGGCTGCTATAGTGAGCCGTGTTGTCCACGGGAGTCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCGTATA

Coding sequence (CDS)

ATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAG

Protein sequence

MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG*

Homology

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BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: O23166 (Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF164 PE=1 SV=2)

HSP 1 Score: 324.3 bits (830), Expect = 1.3e-87
Identity = 171/259 (66.02%), Postives = 200/259 (77.22%), Query Frame = 0


Query: 30  RIPHPLLQPSAARFPSSPR-------------RFPPLACQTLPESHDTTSAP------EK 89
           R+   L  PS+  F  SPR             RF  + C+  PES +T          E 
Sbjct: 3   RLVFSLNLPSSHGFNLSPRNLQSFFVTQTGAPRFRAVRCKPNPESSETKQEKLVIDNGET 62

Query: 90  SSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 149
           SS   E    ++   +SSSS+ GFPE PNKDINRRVA V+ ++AL+LF S+RLDFG+SLK
Sbjct: 63  SSASKEVESSSSVADSSSSSSSGFPESPNKDINRRVAAVTVIAALSLFVSTRLDFGISLK 122

Query: 150 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 209
           DL A+ALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+KD+VNFVMLNVDNTK
Sbjct: 123 DLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTK 182

Query: 210 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 269
           WEQELDEFGVEGIPHFAFLD++GNEEGNVVGRLPRQYL+ENV+ALA G+ SIP+AR VGQ
Sbjct: 183 WEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQ 242

[Close]

BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: Q7Y0D4 (Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767500 PE=2 SV=1)

HSP 1 Score: 318.9 bits (816), Expect = 5.4e-86
Identity = 163/226 (72.12%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 48  RRFPPLACQTLPESHDTTSAPEKSSDGPESPGDTT---GQAASSSSNQGFPEFPNKDINR 107
           RR   L+C   P+S       E  +D P +  D+T    +A+S+S + G P FPNKD++R
Sbjct: 43  RRLGSLSCIAPPDS------AEPQTDEPAAKDDSTEDKAEASSASQDAGNPTFPNKDLSR 102

Query: 108 RVAIVSTVSALALFSSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRE 167
           R+A+ ST+ A+ LF+  RLDF GVSLKDLAA A PYEEALSNGKPTVVEFYADWCEVCRE
Sbjct: 103 RIALASTIGAVGLFAYQRLDFGGVSLKDLAANATPYEEALSNGKPTVVEFYADWCEVCRE 162

Query: 168 LAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRL 227
           LAPDVYKVEQQ+KDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDK+GNEEGNVVGRL
Sbjct: 163 LAPDVYKVEQQYKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKEGNEEGNVVGRL 222

Query: 228 PRQYLLENVDALARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           P+QY L+NV ALA GE ++PHARVVGQFSSAE+RKVHQV+DPRSHG
Sbjct: 223 PKQYFLDNVVALASGEPTVPHARVVGQFSSAESRKVHQVADPRSHG 262

[Close]

BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P73920 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30
Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 0


Query: 98  PNKDINRRVAIVSTVSALALFSSSRLDF-GVSLKDLAAAALPYEEALSNGKPTVVEFYAD 157
           P K  N  +A+V+   + A++   +    G+SL+  A  A+P   AL NG+PT+VEFYAD
Sbjct: 3   PAKIRNALLAVVAIALSAAVYLGFQTQTQGISLEAQAQRAIPLATALDNGRPTLVEFYAD 62

Query: 158 WCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEE 217
           WC  C+ +APD+ ++++ +   VNF MLNVDN KW  E+  + V+GIPHF +LD  G   
Sbjct: 63  WCTSCQAMAPDLAELKKNYGGSVNFAMLNVDNNKWLPEVLRYRVDGIPHFVYLDDTGTAI 122

Query: 218 GNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVH-QVSDPRSHG 270
              +G  P + L +N+ AL   E  IP+A V GQ S  E R +    + PRSHG
Sbjct: 123 AESIGEQPLRVLEQNITALVAHE-PIPYANVTGQTSVVENRTIEADPTSPRSHG 175

[Close]

BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P35088 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=txlA PE=3 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 3.9e-28
Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 0


Query: 106 VAIVSTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELA 165
           +A    ++ L +  S +     SL  LA  A PYE A++N +P ++EFYADWC  C+ +A
Sbjct: 17  IAAALVLTILVVLGSRQPSAAASLASLAEQATPYEVAIANDRPMLLEFYADWCTSCQAMA 76

Query: 166 PDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPR 225
             +  ++Q + DR++FVMLN+DN KW  E+ ++ V+GIP F +L+ QG  +G  +G LPR
Sbjct: 77  GRIAALKQDYSDRLDFVMLNIDNDKWLPEVLDYNVDGIPQFVYLNGQGQPQGISIGELPR 136

Query: 226 QYLLENVDALARGEASIPHARVVG---QFSSAEARKVHQVSDPRSH 269
             L  N+DAL   +  +P+    G   +FS+         +DPRSH
Sbjct: 137 SVLAANLDALVEAQ-PLPYTNARGNLSEFSADLQPSRSSQTDPRSH 181

[Close]

BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P12243 (Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trxA PE=3 SV=2)

HSP 1 Score: 62.4 bits (150), Expect = 9.1e-09
Identity = 31/94 (32.98%), Postives = 49/94 (52.13%), Query Frame = 0


Query: 140 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 199
           +E L +  P +V+F+A WC  CR +AP V ++ QQ+ D+V  V +N D         ++G
Sbjct: 14  QEVLESSIPVLVDFWAPWCGPCRMVAPVVDEIAQQYSDQVKVVKVNTDEN--PSVASQYG 73

Query: 200 VEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVD 234
           +  IP    + K G     VVG +P+  L   +D
Sbjct: 74  IRSIPTL-MIFKDGQRVDTVVGAVPKTTLANTLD 104

[Close]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A0A0KG26 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G488380 PE=4 SV=1)

HSP 1 Score: 514.6 bits (1324), Expect = 2.5e-142
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 11  MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK 70
           MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK
Sbjct: 1   MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK 60

Query: 71  SSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 130
           SS+GPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK
Sbjct: 61  SSNGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 120

Query: 131 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 190
           DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK
Sbjct: 121 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 180

Query: 191 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 250
           WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ
Sbjct: 181 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 240

Query: 251 FSSAEARKVHQVSDPRSHG 270
           FSSAEARKVHQVSDPRSHG
Sbjct: 241 FSSAEARKVHQVSDPRSHG 259

[Close]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A5D3CPH8 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005290 PE=4 SV=1)

HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142
Identity = 258/269 (95.91%), Postives = 261/269 (97.03%), Query Frame = 0


Query: 1   MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPE 60
           MSFP IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPE
Sbjct: 1   MSFPQICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPE 60

Query: 61  SHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSS 120
           SHDT+SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSS
Sbjct: 61  SHDTSSAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSS 120

Query: 121 SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN 180
           SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN
Sbjct: 121 SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN 180

Query: 181 FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA 240
           FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA
Sbjct: 181 FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA 240

Query: 241 SIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           SIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 241 SIPHARVVGQFSSAEARKVHQVSDPRSHG 269

[Close]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S3B0J9 (thioredoxin-like protein HCF164, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 6   ICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTT 65
           IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPESHDT+
Sbjct: 36  ICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPESHDTS 95

Query: 66  SAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDF 125
           SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSSSRLDF
Sbjct: 96  SAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSSSRLDF 155

Query: 126 GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN 185
           GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN
Sbjct: 156 GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN 215

Query: 186 VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA 245
           VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA
Sbjct: 216 VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA 275

Query: 246 RVVGQFSSAEARKVHQVSDPRSHG 270
           RVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 276 RVVGQFSSAEARKVHQVSDPRSHG 299

[Close]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S3B047 (thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138
Identity = 255/275 (92.73%), Postives = 259/275 (94.18%), Query Frame = 0


Query: 1   MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPE 60
           + F  IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPE
Sbjct: 18  LDFTEICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPE 77

Query: 61  SHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSS 120
           SHDT+SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSS
Sbjct: 78  SHDTSSAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSS 137

Query: 121 SRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ 180
           SRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ
Sbjct: 138 SRLDFGVSLKDLAAAALPYEEIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ 197

Query: 181 FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA 240
           FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA
Sbjct: 198 FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA 257

Query: 241 LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 258 LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 292

[Close]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S4DU52 (thioredoxin-like protein HCF164, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137
Identity = 254/270 (94.07%), Postives = 257/270 (95.19%), Query Frame = 0


Query: 6   ICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTT 65
           IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPESHDT+
Sbjct: 3   ICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPESHDTS 62

Query: 66  SAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDF 125
           SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSSSRLDF
Sbjct: 63  SAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSSSRLDF 122

Query: 126 GVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV 185
           GVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV
Sbjct: 123 GVSLKDLAAAALPYEEIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV 182

Query: 186 NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE 245
           NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE
Sbjct: 183 NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE 242

Query: 246 ASIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           ASIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 243 ASIPHARVVGQFSSAEARKVHQVSDPRSHG 272

[Close]

BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_004141943.1 (thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus] >KGN48468.1 hypothetical protein Csa_002766 [Cucumis sativus])

HSP 1 Score: 514.6 bits (1324), Expect = 5.1e-142
Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0


Query: 11  MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK 70
           MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK
Sbjct: 1   MARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEK 60

Query: 71  SSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 130
           SS+GPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK
Sbjct: 61  SSNGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 120

Query: 131 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 190
           DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK
Sbjct: 121 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 180

Query: 191 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 250
           WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ
Sbjct: 181 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 240

Query: 251 FSSAEARKVHQVSDPRSHG 270
           FSSAEARKVHQVSDPRSHG
Sbjct: 241 FSSAEARKVHQVSDPRSHG 259

[Close]

BLAST of CSPI06G27560 vs. NCBI nr
Match: TYK12934.1 (thioredoxin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 513.8 bits (1322), Expect = 8.7e-142
Identity = 258/269 (95.91%), Postives = 261/269 (97.03%), Query Frame = 0


Query: 1   MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPE 60
           MSFP IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPE
Sbjct: 1   MSFPQICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPE 60

Query: 61  SHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSS 120
           SHDT+SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSS
Sbjct: 61  SHDTSSAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSS 120

Query: 121 SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN 180
           SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN
Sbjct: 121 SRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVN 180

Query: 181 FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA 240
           FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA
Sbjct: 181 FVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEA 240

Query: 241 SIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           SIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 241 SIPHARVVGQFSSAEARKVHQVSDPRSHG 269

[Close]

BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_008440188.2 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis melo])

HSP 1 Score: 505.4 bits (1300), Expect = 3.1e-139
Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0


Query: 6   ICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTT 65
           IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPESHDT+
Sbjct: 36  ICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPESHDTS 95

Query: 66  SAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDF 125
           SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSSSRLDF
Sbjct: 96  SAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSSSRLDF 155

Query: 126 GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN 185
           GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN
Sbjct: 156 GVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLN 215

Query: 186 VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA 245
           VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA
Sbjct: 216 VDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHA 275

Query: 246 RVVGQFSSAEARKVHQVSDPRSHG 270
           RVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 276 RVVGQFSSAEARKVHQVSDPRSHG 299

[Close]

BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_008440187.2 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo])

HSP 1 Score: 501.5 bits (1290), Expect = 4.5e-138
Identity = 255/275 (92.73%), Postives = 259/275 (94.18%), Query Frame = 0


Query: 1   MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPE 60
           + F  IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPE
Sbjct: 18  LDFTEICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPE 77

Query: 61  SHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSS 120
           SHDT+SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSS
Sbjct: 78  SHDTSSAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSS 137

Query: 121 SRLDFGVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ 180
           SRLDFGVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ
Sbjct: 138 SRLDFGVSLKDLAAAALPYEEIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQ 197

Query: 181 FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA 240
           FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA
Sbjct: 198 FKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDA 257

Query: 241 LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 258 LARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG 292

[Close]

BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_016899240.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo])

HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137
Identity = 254/270 (94.07%), Postives = 257/270 (95.19%), Query Frame = 0


Query: 6   ICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTT 65
           IC SPMARFA SNSI LHRIPL  RIPHPLLQPSAARFPSS RRFPPLACQTLPESHDT+
Sbjct: 3   ICKSPMARFAASNSITLHRIPLGLRIPHPLLQPSAARFPSSRRRFPPLACQTLPESHDTS 62

Query: 66  SAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDF 125
           SAPEKSSDGPES GDTTGQAASSSSNQGFPEFPNKDINRR+AI+STVSALALFSSSRLDF
Sbjct: 63  SAPEKSSDGPESAGDTTGQAASSSSNQGFPEFPNKDINRRIAIISTVSALALFSSSRLDF 122

Query: 126 GVSLKDLAAAALPYEE------ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV 185
           GVSLKDLAAAALPYEE      ALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV
Sbjct: 123 GVSLKDLAAAALPYEEIHMMIQALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRV 182

Query: 186 NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE 245
           NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE
Sbjct: 183 NFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGE 242

Query: 246 ASIPHARVVGQFSSAEARKVHQVSDPRSHG 270
           ASIPHARVVGQFSSAEARKVHQVSDPRSHG
Sbjct: 243 ASIPHARVVGQFSSAEARKVHQVSDPRSHG 272

[Close]

BLAST of CSPI06G27560 vs. TAIR 10
Match: AT4G37200.1 (Thioredoxin superfamily protein )

HSP 1 Score: 324.3 bits (830), Expect = 9.1e-89
Identity = 171/259 (66.02%), Postives = 200/259 (77.22%), Query Frame = 0


Query: 30  RIPHPLLQPSAARFPSSPR-------------RFPPLACQTLPESHDTTSAP------EK 89
           R+   L  PS+  F  SPR             RF  + C+  PES +T          E 
Sbjct: 3   RLVFSLNLPSSHGFNLSPRNLQSFFVTQTGAPRFRAVRCKPNPESSETKQEKLVIDNGET 62

Query: 90  SSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLK 149
           SS   E    ++   +SSSS+ GFPE PNKDINRRVA V+ ++AL+LF S+RLDFG+SLK
Sbjct: 63  SSASKEVESSSSVADSSSSSSSGFPESPNKDINRRVAAVTVIAALSLFVSTRLDFGISLK 122

Query: 150 DLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTK 209
           DL A+ALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYK+EQQ+KD+VNFVMLNVDNTK
Sbjct: 123 DLTASALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKIEQQYKDKVNFVMLNVDNTK 182

Query: 210 WEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQ 269
           WEQELDEFGVEGIPHFAFLD++GNEEGNVVGRLPRQYL+ENV+ALA G+ SIP+AR VGQ
Sbjct: 183 WEQELDEFGVEGIPHFAFLDREGNEEGNVVGRLPRQYLVENVNALAAGKQSIPYARAVGQ 242

[Close]

BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.2 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 140 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 199
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 200 VEGIPHFAFLDKQGNEEGN 219
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.1 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 140 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 199
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 200 VEGIPHFAFLDKQGNEEGN 219
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.3 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 140 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 199
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 200 VEGIPHFAFLDKQGNEEGN 219
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

[Close]

BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.4 (thioredoxin family protein )

HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07
Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0


Query: 140 EEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFG 199
           E  L   K  +VEFYA WC  C+ LAP   KV   FK     V+ N+D    +   +++G
Sbjct: 153 EIVLDQNKDVLVEFYAPWCGHCKSLAPTYEKVATVFKQEEGVVIANLDADAHKALGEKYG 212

Query: 200 VEGIPHFAFLDKQGNEEGN 219
           V G P   F  K  N+ G+
Sbjct: 213 VSGFPTLKFFPKD-NKAGH 230

The following BLAST results are available for this feature:

BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O23166	1.3e-87	66.02	Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 G...	[more]
Q7Y0D4	5.4e-86	72.12	Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica O...	[more]
P73920	1.4e-30	41.38	Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PC...	[more]
P35088	3.9e-28	37.95	Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC ...	[more]
P12243	9.1e-09	32.98	Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 G...	[more]

BLAST of CSPI06G27560 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG26	2.5e-142	99.61	Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G488380...	[more]
A0A5D3CPH8	4.2e-142	95.91	Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffol...	[more]
A0A1S3B0J9	1.5e-139	96.21	thioredoxin-like protein HCF164, chloroplastic isoform X2 OS=Cucumis melo OX=365...	[more]
A0A1S3B047	2.2e-138	92.73	thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucumis melo OX=365...	[more]
A0A1S4DU52	1.4e-137	94.07	thioredoxin-like protein HCF164, chloroplastic isoform X4 OS=Cucumis melo OX=365...	[more]

BLAST of CSPI06G27560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141943.1	5.1e-142	99.61	thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus] >KGN48468.1 hyp...	[more]
TYK12934.1	8.7e-142	95.91	thioredoxin-like protein [Cucumis melo var. makuwa]	[more]
XP_008440188.2	3.1e-139	96.21	PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis me...	[more]
XP_008440187.2	4.5e-138	92.73	PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis me...	[more]
XP_016899240.1	2.9e-137	94.07	PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis me...	[more]

BLAST of CSPI06G27560 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G37200.1	9.1e-89	66.02	Thioredoxin superfamily protein	[more]
AT2G47470.2	1.0e-07	36.71	thioredoxin family protein	[more]
AT2G47470.1	1.0e-07	36.71	thioredoxin family protein	[more]
AT2G47470.3	1.0e-07	36.71	thioredoxin family protein	[more]
AT2G47470.4	1.0e-07	36.71	thioredoxin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.40.30.10	Glutaredoxin	coord: 131..244 e-value: 1.9E-26 score: 94.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 58..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 51..98
None	No IPR available	CDD	cd02950	TxlA	coord: 127..268 e-value: 3.88346E-85 score: 248.79
IPR013766	Thioredoxin domain	PFAM	PF00085	Thioredoxin	coord: 139..233 e-value: 4.3E-20 score: 71.6
IPR013766	Thioredoxin domain	PROSITE	PS51352	THIOREDOXIN_2	coord: 88..237 score: 15.632377
IPR044241	Thiol:disulfide interchange protein TxlA/HCF164	PANTHER	PTHR47353	THIOREDOXIN-LIKE PROTEIN HCF164, CHLOROPLASTIC	coord: 11..269
IPR036249	Thioredoxin-like superfamily	SUPERFAMILY	52833	Thioredoxin-like	coord: 139..236

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G27560.1	CSPI06G27560.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0010190	cytochrome b6f complex assembly
cellular_component	GO:0009535	chloroplast thylakoid membrane
molecular_function	GO:0016671	oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor