
CSPI06G27560 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AATGAATTAACTAAGCAAACTGCCTAGTCCAAAGTGAAAAAGTCGAATGAAAATATTTGAATGAGTAAACTTATCTCGTTATGAACTCCCAAAATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGTATGCTTCAATCTCTTCTCTTCTTATTGTTTTTGCTTAATTTTCTTCAATTATTGAGTCAACCATATTAGCCCTAATTCCCTGAAATCGAAACCAATTCAATTTTATTCTCGCTTTCAGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGTTTGGAAATTTGGAATCTAATAGTTCTAGCAATCTCTTTGTTTTACATGATTATGATTTCACATTCTTCAAGTAATTAGAGCTCATGATGAAGATTCATATGATGATTCAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGTAATACTTTATGGAAATGCTTGTTTACAAGAATTTTTTGTTGTTTGAATTTGAGGAAGGTAAATAGATCTTTGTTCTTCCAGGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAACAATTTGCCAATTCAAATACTCTTTGATAGGTATTCCAGATATAGTTAGTCCATCTTATACCATATATCCAATTGTTTATTGTACTATGGACATAACTTCTTCTCTTGATAGTAAATAAGTCTTTATTTCTTCTCTTGATTGTAAATATTTGCTTTTTTATGTTAACTACTGGTGGGTTTAATGATTAAAAGAACAAGTACCCAGGTTGAATCCTTCATATTTTTGTGGTGTTCTGCAATCTTTATTTACTCAATTATGATAATCTCATTACTTTTACTTTTGTACATGTTTTGGAAAAATGAAACAAGTAATACAAGAATTGTAATTGATCAGATAAGCCGATCCCATGGCTTGGATCTGAACTTCATGTGAAGAAAATGTCCTATCGCTTGGCATGTGGCATTCCCTTAAGACGAGTGAAGAATGCTTCACATTTTTTGGAAAATGGCATTGGCATCTACAATTCTATCAATAAGGAGGTTAAAAACAATGATGACACAATATAAGATATTCCGTAGGGTACACAAATAATGGTGAAATGTAAAAGGTTAAATGTCCTACAAAAGATCTTCCTCTTCTTCTTCTTCTTCTCTTTTCACCGTGCTACATTACCCAATAAACTATTTGTTGAAGGGGAGCTTTGTTCACTTAACCAAGGATCCTGTATTGAAACTGGGGAGCTATCCATAACCTCCTCCACAGGAGGTAGATAGTCCTTATTATGGTTGTTCTCCGGCGGGATTATCAATCTCTGGCTTCCCAATCCTGCAAGCAGCCCGGCCTTCTTAATTGTTATGCCACTTATGGATCTCTCGCTTATGCTACGAGGAGATGAACAAGCTGATCCTGCAGATGATGCTCCACAAAAATGCTCCTCCATTGATGTCCATCCACTGCGTCTGATGCTTTCCAATTCCTCTGCTACTTCTGTCATTGAAGGTCTCATGTCGCTGTGGAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTATGTGGCTCGAGGAAAGGATCAATTAGTTCATCCACAGAGTTTCTCCCAATCCTATCAATGGCAAGTGCAGCTAAGTTTACTTCACTTTGGGGACGAGTGAAATCAACCACTTTCAATGCTGTTATTATCTCTACTAGGACTACTCCAAAACTATATACGTCACTTTTGTCTGAAAGATAAAAATTTTGATGGTATTGTGGATCAACGTAGCCTGGGGTTCCTTGGGGAGCTGTTGAGACGTGCGATATTTCTGTCATACCAAGTCGAGAGAGACCAAAATCTGCAACTTTTGATTTGAAACCATGATCCAGGAGTATATTGCTCGATTTGATGTCTCTGTGATATATTGGTGGGTGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTCTCGGCTGCTATAGTGAGCCGTGTTGTCCACGGGAGTCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCGTATA AATGAATTAACTAAGCAAACTGCCTAGTCCAAAGTGAAAAAGTCGAATGAAAATATTTGAATGAGTAAACTTATCTCGTTATGAACTCCCAAAATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAGATTCTCTTCCTTTCTTTGAAGCATTAGGTCAACAATTTGCCAATTCAAATACTCTTTGATAGGTATTCCAGATATAGTTAGTCCATCTTATACCATATATCCAATTGTTTATTGTACTATGGACATAACTTCTTCTCTTGATAGTAAATAAGTCTTTATTTCTTCTCTTGATTGTAAATATTTGCTTTTTTATGTTAACTACTGGTGGGTTTAATGATTAAAAGAACAAGTACCCAGGTTGAATCCTTCATATTTTTGTGGTGTTCTGCAATCTTTATTTACTCAATTATGATAATCTCATTACTTTTACTTTTGTACATGTTTTGGAAAAATGAAACAAGTAATACAAGAATTGTAATTGATCAGATAAGCCGATCCCATGGCTTGGATCTGAACTTCATGTGAAGAAAATGTCCTATCGCTTGGCATGTGGCATTCCCTTAAGACGAGTGAAGAATGCTTCACATTTTTTGGAAAATGGCATTGGCATCTACAATTCTATCAATAAGGAGGTTAAAAACAATGATGACACAATATAAGATATTCCGTAGGGTACACAAATAATGGTGAAATGTAAAAGGTTAAATGTCCTACAAAAGATCTTCCTCTTCTTCTTCTTCTTCTCTTTTCACCGTGCTACATTACCCAATAAACTATTTGTTGAAGGGGAGCTTTGTTCACTTAACCAAGGATCCTGTATTGAAACTGGGGAGCTATCCATAACCTCCTCCACAGGAGGTAGATAGTCCTTATTATGGTTGTTCTCCGGCGGGATTATCAATCTCTGGCTTCCCAATCCTGCAAGCAGCCCGGCCTTCTTAATTGTTATGCCACTTATGGATCTCTCGCTTATGCTACGAGGAGATGAACAAGCTGATCCTGCAGATGATGCTCCACAAAAATGCTCCTCCATTGATGTCCATCCACTGCGTCTGATGCTTTCCAATTCCTCTGCTACTTCTGTCATTGAAGGTCTCATGTCGCTGTGGAAAGCAAGGCATCTGAATGCAAGCTCAGCCACCTTGTGAATAGAGTAGAGGGTCCAAGCATCTCTATGTGGCTCGAGGAAAGGATCAATTAGTTCATCCACAGAGTTTCTCCCAATCCTATCAATGGCAAGTGCAGCTAAGTTTACTTCACTTTGGGGACGAGTGAAATCAACCACTTTCAATGCTGTTATTATCTCTACTAGGACTACTCCAAAACTATATACGTCACTTTTGTCTGAAAGATAAAAATTTTGATGGTATTGTGGATCAACGTAGCCTGGGGTTCCTTGGGGAGCTGTTGAGACGTGCGATATTTCTGTCATACCAAGTCGAGAGAGACCAAAATCTGCAACTTTTGATTTGAAACCATGATCCAGGAGTATATTGCTCGATTTGATGTCTCTGTGATATATTGGTGGGTGCACAGAAGAATGAAGGTATGCTATTGCACGAGAAGTCTCGGCTGCTATAGTGAGCCGTGTTGTCCACGGGAGTCCATTTCCACGCTCTCTCTGAAGATGTTGAGAGAGAGTTCCATTGGGCATAAACTCGTATA ATGTCATTCCCTCACATTTGTAATTCTCCAATGGCTCGCTTTGCTCCTTCAAATTCCATCGCTCTCCACCGAATTCCTCTCTGTTTTCGTATCCCTCACCCTCTCCTTCAACCCTCCGCCGCCCGCTTTCCATCTTCCCCCCGCCGATTTCCTCCATTAGCCTGCCAAACGCTTCCCGAATCGCACGACACCACCTCCGCTCCGGAAAAATCGTCGGACGGTCCTGAATCACCCGGTGACACCACTGGCCAAGCCGCTAGCTCTTCAAGTAATCAGGGTTTTCCTGAGTTTCCCAATAAAGATATCAATAGACGAGTTGCCATAGTTTCTACTGTTTCAGCACTGGCACTTTTCTCGTCAAGTCGATTGGATTTTGGTGTTTCTTTGAAGGACTTAGCTGCTGCGGCTTTGCCTTATGAAGAGGCTCTTTCAAATGGGAAGCCCACTGTTGTGGAGTTCTATGCAGATTGGTGTGAAGTTTGTAGGGAATTGGCTCCAGATGTATACAAAGTTGAGCAACAGTTCAAGGACCGTGTGAATTTTGTAATGCTTAATGTTGATAATACAAAGTGGGAGCAGGAGCTTGATGAGTTTGGTGTTGAGGGTATTCCACATTTTGCTTTTTTAGACAAACAGGGGAATGAAGAGGGCAATGTAGTTGGTCGACTTCCAAGACAATATCTGCTGGAGAATGTAGACGCTCTTGCTCGTGGAGAAGCATCGATACCTCATGCTCGTGTTGTGGGACAGTTTTCAAGTGCTGAAGCAAGGAAAGTGCACCAAGTTTCTGATCCAAGAAGTCATGGGTAG MSFPHICNSPMARFAPSNSIALHRIPLCFRIPHPLLQPSAARFPSSPRRFPPLACQTLPESHDTTSAPEKSSDGPESPGDTTGQAASSSSNQGFPEFPNKDINRRVAIVSTVSALALFSSSRLDFGVSLKDLAAAALPYEEALSNGKPTVVEFYADWCEVCRELAPDVYKVEQQFKDRVNFVMLNVDNTKWEQELDEFGVEGIPHFAFLDKQGNEEGNVVGRLPRQYLLENVDALARGEASIPHARVVGQFSSAEARKVHQVSDPRSHG* Homology
BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: O23166 (Thioredoxin-like protein HCF164, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=HCF164 PE=1 SV=2) HSP 1 Score: 324.3 bits (830), Expect = 1.3e-87 Identity = 171/259 (66.02%), Postives = 200/259 (77.22%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: Q7Y0D4 (Thioredoxin-like protein HCF164, chloroplastic OS=Oryza sativa subsp. japonica OX=39947 GN=Os03g0767500 PE=2 SV=1) HSP 1 Score: 318.9 bits (816), Expect = 5.4e-86 Identity = 163/226 (72.12%), Postives = 187/226 (82.74%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P73920 (Thiol:disulfide interchange protein TxlA homolog OS=Synechocystis sp. (strain PCC 6803 / Kazusa) OX=1111708 GN=txlA PE=3 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.4e-30 Identity = 72/174 (41.38%), Postives = 103/174 (59.20%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P35088 (Thiol:disulfide interchange protein TxlA OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=txlA PE=3 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 3.9e-28 Identity = 63/166 (37.95%), Postives = 97/166 (58.43%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy Swiss-Prot
Match: P12243 (Thioredoxin 1 OS=Synechococcus elongatus (strain PCC 7942 / FACHB-805) OX=1140 GN=trxA PE=3 SV=2) HSP 1 Score: 62.4 bits (150), Expect = 9.1e-09 Identity = 31/94 (32.98%), Postives = 49/94 (52.13%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A0A0KG26 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G488380 PE=4 SV=1) HSP 1 Score: 514.6 bits (1324), Expect = 2.5e-142 Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A5D3CPH8 (Thioredoxin-like protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005290 PE=4 SV=1) HSP 1 Score: 513.8 bits (1322), Expect = 4.2e-142 Identity = 258/269 (95.91%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S3B0J9 (thioredoxin-like protein HCF164, chloroplastic isoform X2 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 1.5e-139 Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S3B047 (thioredoxin-like protein HCF164, chloroplastic isoform X3 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1) HSP 1 Score: 501.5 bits (1290), Expect = 2.2e-138 Identity = 255/275 (92.73%), Postives = 259/275 (94.18%), Query Frame = 0
BLAST of CSPI06G27560 vs. ExPASy TrEMBL
Match: A0A1S4DU52 (thioredoxin-like protein HCF164, chloroplastic isoform X4 OS=Cucumis melo OX=3656 GN=LOC103484729 PE=4 SV=1) HSP 1 Score: 498.8 bits (1283), Expect = 1.4e-137 Identity = 254/270 (94.07%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_004141943.1 (thioredoxin-like protein HCF164, chloroplastic [Cucumis sativus] >KGN48468.1 hypothetical protein Csa_002766 [Cucumis sativus]) HSP 1 Score: 514.6 bits (1324), Expect = 5.1e-142 Identity = 258/259 (99.61%), Postives = 259/259 (100.00%), Query Frame = 0
BLAST of CSPI06G27560 vs. NCBI nr
Match: TYK12934.1 (thioredoxin-like protein [Cucumis melo var. makuwa]) HSP 1 Score: 513.8 bits (1322), Expect = 8.7e-142 Identity = 258/269 (95.91%), Postives = 261/269 (97.03%), Query Frame = 0
BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_008440188.2 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X2 [Cucumis melo]) HSP 1 Score: 505.4 bits (1300), Expect = 3.1e-139 Identity = 254/264 (96.21%), Postives = 257/264 (97.35%), Query Frame = 0
BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_008440187.2 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X3 [Cucumis melo]) HSP 1 Score: 501.5 bits (1290), Expect = 4.5e-138 Identity = 255/275 (92.73%), Postives = 259/275 (94.18%), Query Frame = 0
BLAST of CSPI06G27560 vs. NCBI nr
Match: XP_016899240.1 (PREDICTED: thioredoxin-like protein HCF164, chloroplastic isoform X4 [Cucumis melo]) HSP 1 Score: 498.8 bits (1283), Expect = 2.9e-137 Identity = 254/270 (94.07%), Postives = 257/270 (95.19%), Query Frame = 0
BLAST of CSPI06G27560 vs. TAIR 10
Match: AT4G37200.1 (Thioredoxin superfamily protein ) HSP 1 Score: 324.3 bits (830), Expect = 9.1e-89 Identity = 171/259 (66.02%), Postives = 200/259 (77.22%), Query Frame = 0
BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.2 (thioredoxin family protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0
BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.1 (thioredoxin family protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0
BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.3 (thioredoxin family protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0
BLAST of CSPI06G27560 vs. TAIR 10
Match: AT2G47470.4 (thioredoxin family protein ) HSP 1 Score: 55.1 bits (131), Expect = 1.0e-07 Identity = 29/79 (36.71%), Postives = 39/79 (49.37%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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