CSPI06G27340 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G27340
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	NEDD8-conjugating enzyme Ubc12
Location	Chr6: 24038464 .. 24042214 (-)
RNA-Seq Expression	CSPI06G27340
Synteny	CSPI06G27340

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAAAAGCAAAATAAAAATTCGTGGATTCTATGAGAGTCCAATCGAAGCCAACTCTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCTAAACCGCCCACCTTCCTCTCTCCCTCTCTATTTCCATTTTCTGCAACTCAGACCTAACTTCCTTCTCTTATTCACAGGTTTGATTTCTTCACAACCCCTTTTTCCTTATCGATTTTCGGTTTTCTTCCAATTTCTAGCTCCCTTTCACTTCTTGTTTCTCTGGATTGCTGTTTATCGCCTTTTTTCTTCATTCAATTCTGTGTTCTCTATTGGGTCTTTGGAATATAGCCTCTTGATTGCTTTCTTGTAATTACAAACGTGATTATGTTTTGATTACTCGCGGAATCGCATTGTAATTGTGTCGGCTCTGGTTTCAACTTTTTTTTGTTTTTTTTGTTTTTTTTTGTTTTTCGTTTTATAACTTAAGATTTGAGTATTCTTATTTGTCTGGGACGATTTCTAGTGTTGGGATTGTGGATAATATGATTAGTTTTCATTCGAGTTTCCGGTGGGTTTTGTTGGTATGTTCGATTCTAAGTGGCATGTTCTTTGTTGAGAGGTTTTGGGAGGATCAGAATCCCAACCCTTTTGACTTTTTTGTTTGCCATGGAGATTTAGTTTGGGTTTTTGTAGTCAATTGGGTATTGGGTTTACATTGGATCTTAGTGATGTCACAAGTCCATGACTCAGCTGGGTGCTTGAAGAGGTTTTGTTTGTTCTCTTTATTGTGTTGTAAAATTTTTCCTTCGAGAGGATCGGAAGGGTTTTTGAAGGTTTGGAGGGAGACTTATTTTTATTTCTGTAATTGGATTTCCTTAAATAAGTTGTTTATTAAACTCTCCTTCTTTCTCTCTCATAAAGAACATTCTGCTGGGGCTCATTTTTCTAGGTGCTGTTATGGTATTGGTAGCCCATTCTATGGTGGTTTGATCTTGTTTTTTCGTGGCATATTTGTTTTGTTTCATTCTTGTTATTGAAAGTTGGTTTCTCACCCTTAGAGGTAATTTTTTAAAATAGCATAACATATGCAAGGGGTGTAATTGCATATTTTGCTGCAGGAGATATGATTAAGTTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGCGTACCTACAAAGAAGCAAAGTGCTGGGGAACTACGTCTTCATAAAGGTTTTGGTTATTAATAGGGTTTATTGAAAACTTGATCTCGTTAGAGGTGATGAGTTGTTTGGAAACTATATCAGTTTGGTTTCCATACATGACTAATGATTATGGGTCATACATTTGAAGCTTTTTTTTTTCTGTGGATTAGACATTGTCATGCCAGTCAATTAGTACAATATATCGCGAACTTTAGTATATTTTTGATAATCTAATTTCTTATTAAGTGATTCGAGACTTGAACACTTCATGTACAAACAAGATGTCTTATATTCAAATACCATGTTTCCCTGTATGTGTCACATCCACATATGATAGTATATAATTATTTTATGTTTATGAGGATCCTGAGTTTATACAGAGACAGATATCCGGTCTGTATTTTTCATCATTCTCTTGATTTGTTTGTCCTGGCAAGGAGTTAACTGGAGTGTTTGAGTGCATTAGATTTTTCATGTATCATGGTCCTAGGCTAATCTCCATTGAATTTTATGTTTTTATTTGATCGTTTAGACAAGATTTTCATAGGTAATTTTGTGGTAGATATTGAGTGGAATTTAAATTTATTTGTGTAAAATTTTGAGATACATGGTGATTGGTGCATGAGAACGCAAAGGTTCTATAGCTTTGCTTAATGTATGATGAAATGAGGAGTGAACCCAAAGCGACTTTTCCAGTTATAAGATTGTTGGTCAATAGAAGTAAATTTTGATCTCTTCCCTTAATTTAATCATTAAAGAACCTTGTCATAATTCAATTGAGTGGATGTTATTAAATCAATTGACTTGAGCGGGACACTGGAAATTTTGCTTGTCTTGTGAAAAAAGGCGTTTCATTCTAAGACATTATCTGTTTCTAAGATGTTAATGAGGTTTGTGATCATATATGATGTCATTTTATCACATTTAGTAATGTTGGGTTGGGGGCATGATATCCCAAAGAATCTTGATAGCCAAAGAAAACATGATTGGTAGAAGCCCTGGAGTGATCTATTTTGCATTTTTCTTTTTCTTATTTCTTTTCATGATACTTATTCATCAAGCGGGGCTTCCAAATTTCACAGCCTTTTTGGCATGCTCTTGCGGTTTCTTTGTTTAGATAATTTATCCAATGGAATTTGACCATTTGAAATAATTCACACCCCAACATATGAACTGAAGTCTATCAATTCTGTTGGAGTTTTTAGTTGACTAATTTTGTTATGTGTATTCTAATTTGAGGGAGAGTTACTTGACAGTGTGTTATGTTGGTGCTTAATCTGTTACAGATATTAGTGAGCTGAATCTACCAAAGTCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCGGACGAGGGATATTATTTGTAAGTATTCTTTTTTCTTCTATATTCACACTCAAGCAATCTCTTACTGTTGCCTCTAGTGGTGTGGAGAATATTTTCCTCTTCTTGTTAATTTATTTCATCCAAACGTTTAACTCTGAACCAGAAATTTAAGTGGAAACTAACACAAAATATTCTTTTGATATGTAGAAAGAAAATTGTAAGTTTCCAATCAATTCAGGAGCATTGTACTCTCCCACAGACTAATTCTAGAAAACTGCTAATCCCAAATTCTCTTGCTCCATCTGTTTATGCTTTCCTGCTTTTCTAATATCTCTTAATAATATTCTCAATGTTTACATACCATTATTCCTAACAGCTTGCTTTTCTCAAAATTACAGAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCACATGAAGCACCTAAAGTCAAGTGCAAGACAAAGGTAAACCTGAGTGGCTTCTTACCCATAAAATTTGATCCTATAGAATGCTAAAGTGATTACTTATACTTTAATGCAGGTTTACCATCCAAACATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTCCTTAATATTAACACTGTGATTTATGGACTCTACCATTTGTTCACGGTATGAACAAAGCATGATTATTAAATGGTTGCAGTATGATAAACTTTTAACATCATAAGCTGTTCCCTTACATTGTTTTGGTGATGCCCTACCAGGAACCAAATGATGAAGACCCACTGAATCATGATGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCAGACCTTTTTCCCACGATGTATGTAACTCACTCTCAATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTCATTTAGAGATATCCCATCCATTCACTTACGTTTGTGTTAGCCCAATGAACTTAGCGATATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGGAATACGGGCTGGCATAGTTTTCAATCCTGATTTTGTGTAGAGAACTTCCAAATTTGTCTCATTCATTATCCCTATGCTAGGCCTCGGCCTACACTTCTGGTC

mRNA sequence

CAAAAAAGCAAAATAAAAATTCGTGGATTCTATGAGAGTCCAATCGAAGCCAACTCTTTATTTGTTGACCTCCGTAGGGCTCACCCACGCTCGCTAAACCGCCCACCTTCCTCTCTCCCTCTCTATTTCCATTTTCTGCAACTCAGACCTAACTTCCTTCTCTTATTCACAGGAGATATGATTAAGTTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGCGTACCTACAAAGAAGCAAAGTGCTGGGGAACTACGTCTTCATAAAGATATTAGTGAGCTGAATCTACCAAAGTCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCGGACGAGGGATATTATTTAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCACATGAAGCACCTAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAACATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTCCTTAATATTAACACTGTGATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGATGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCAGACCTTTTTCCCACGATGTATGTAACTCACTCTCAATCCTTCACGTTCATCTTTTCCTGCGCTGTATGTAGCTAGCTTTTGTCTCTTGGTACATTAAGTGCTCATTTAGAGATATCCCATCCATTCACTTACGTTTGTGTTAGCCCAATGAACTTAGCGATATTAATGTGTATCATTTCTATATTGTCAATTAACATGGTTATATTTTCCTCAATATTTTGGATGGAAGCCATGGGAATACGGGCTGGCATAGTTTTCAATCCTGATTTTGTGTAGAGAACTTCCAAATTTGTCTCATTCATTATCCCTATGCTAGGCCTCGGCCTACACTTCTGGTC

Coding sequence (CDS)

ATGATTAAGTTATTTAAAGTCAAGGAGAAGCAGAGAGAACTTGCTGAAAATGCTAGTAATGGCGTACCTACAAAGAAGCAAAGTGCTGGGGAACTACGTCTTCATAAAGATATTAGTGAGCTGAATCTACCAAAGTCATGTAACATAACCTTTCCCAATGGCAAGGATGACCTCATGAACTTTGAGGTGTCAATACGACCGGACGAGGGATATTATTTAGGAGGCACGTTTTATTTCTCCTTTACAGTTTCCCCCATCTATCCACATGAAGCACCTAAAGTCAAGTGCAAGACAAAGGTTTACCATCCAAACATTGACTTGGAAGGAAATGTGTGCCTCAACATTTTACGGGAAGATTGGAAGCCTGTCCTTAATATTAACACTGTGATTTATGGACTCTACCATTTGTTCACGGAACCAAATGATGAAGACCCACTGAATCATGATGCTGCTGCAGTTCTAAGAGACAACCCGAAGTTGTTTGAATCTAATGTGAGAAGGGCTATGGCTGGGGGTTACGTGGGGCAGACCTTTTTCCCACGATGTATGTAA

Protein sequence

MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMNFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFPRCM*

Homology

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BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot
Match: Q9SDY5 (NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1)

HSP 1 Score: 338.6 bits (867), Expect = 4.5e-92
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENAS-NGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 60
           MI LFKVKEKQRE A+NA+  G   KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 61  NFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120
           NFEVSI+PD+GYY  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 121 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 180
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVGQTFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 181 PRCM 184
           PRC+
Sbjct: 181 PRCI 184

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BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot
Match: Q9ZU75 (Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=RCE2 PE=2 SV=1)

HSP 1 Score: 318.2 bits (814), Expect = 6.3e-86
Identity = 155/185 (83.78%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAE-NASNGVPT-KKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 60
           MI LFKVKEKQRE ++ N   G  T KKQSAGELRLHKDISELNLPKSC I+FPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 61  MNFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120
           MNFEV+I+PDEGYYL G F FSF VS +YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 121 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTF 180
           DWKPVLNINTVIYGL+HLFTEPN EDPLNH+AAAVLRDNPK FE NVRRAM GG VGQT 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 181 FPRCM 184
           FPRCM
Sbjct: 181 FPRCM 185

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BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot
Match: Q6DCZ9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-63
Identity = 113/183 (61.75%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLF +K++++E          +KK SA +LR+ KDI+ELNLPK+C I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDITELNLPKTCEIEF-SDHDDLLN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           F++ I PDEG+Y GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 181 RCM 184
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot
Match: Q6P8D9 (NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1)

HSP 1 Score: 243.4 bits (620), Expect = 2.0e-63
Identity = 113/183 (61.75%), Postives = 142/183 (77.60%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLF +K++++E          +KK SA +LR+ KDI+ELNLPK+C I F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCEIEF-SDHDDLLN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           F++ I PDEG+Y GG F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKGGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 181 RCM 184
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot
Match: A3KN22 (NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1)

HSP 1 Score: 242.3 bits (617), Expect = 4.4e-63
Identity = 112/183 (61.20%), Postives = 143/183 (78.14%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLF +K++++E          +KK SA +LR+ KDI+ELNLPK+C+I+F +  DDL+N
Sbjct: 1   MIKLFSLKQQKKEEESAGGTKGSSKKASAAQLRIQKDINELNLPKTCDISF-SDPDDLLN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           F++ I PDEG+Y  G F FSF V   YPH+ PKVKC+T VYHPNIDLEGNVCLNILREDW
Sbjct: 61  FKLVICPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVL IN++IYGL +LF EPN EDPLN +AA VL++N +LFE NV+R+M GGY+G T+F 
Sbjct: 121 KPVLTINSIIYGLQYLFLEPNPEDPLNKEAAEVLQNNRRLFEQNVQRSMRGGYIGSTYFE 180

Query: 181 RCM 184
           RC+
Sbjct: 181 RCL 182

[Close]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL
Match: A0A0A0KJ88 (UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE=3 SV=1)

HSP 1 Score: 387.1 bits (993), Expect = 4.1e-104
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL
Match: A0A5D3CPJ2 (NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005500 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF 
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFA 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL
Match: A0A1S3B168 (NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo OX=3656 GN=LOC103484703 PE=3 SV=1)

HSP 1 Score: 382.5 bits (981), Expect = 1.0e-102
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF 
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFA 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL
Match: A0A6J1BVM5 (NEDD8-conjugating enzyme Ubc12 OS=Momordica charantia OX=3673 GN=LOC111005769 PE=3 SV=1)

HSP 1 Score: 381.7 bits (979), Expect = 1.7e-102
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENA+NGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENANNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEV+IRPDEGYYLGGTF FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL
Match: A0A6J1GG19 (NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita moschata OX=3662 GN=LOC111453848 PE=3 SV=1)

HSP 1 Score: 379.8 bits (974), Expect = 6.5e-102
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENA NG+PTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENAINGIPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFS 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. NCBI nr
Match: XP_011657802.1 (NEDD8-conjugating enzyme Ubc12 [Cucumis sativus] >KGN48442.1 hypothetical protein Csa_003001 [Cucumis sativus])

HSP 1 Score: 387.1 bits (993), Expect = 8.4e-104
Identity = 183/183 (100.00%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. NCBI nr
Match: XP_038883862.1 (NEDD8-conjugating enzyme Ubc12 [Benincasa hispida] >XP_038883863.1 NEDD8-conjugating enzyme Ubc12 [Benincasa hispida])

HSP 1 Score: 385.2 bits (988), Expect = 3.2e-103
Identity = 181/183 (98.91%), Postives = 183/183 (100.00%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNG+PTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGIPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. NCBI nr
Match: XP_008440154.1 (PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo] >TYK12954.1 NEDD8-conjugating enzyme Ubc12 [Cucumis melo var. makuwa])

HSP 1 Score: 382.5 bits (981), Expect = 2.1e-102
Identity = 181/183 (98.91%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNH+AAAVLRDNPKLFESNVRRAMAGGYVGQTFF 
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHEAAAVLRDNPKLFESNVRRAMAGGYVGQTFFA 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. NCBI nr
Match: XP_022133087.1 (NEDD8-conjugating enzyme Ubc12 [Momordica charantia] >XP_022133088.1 NEDD8-conjugating enzyme Ubc12 [Momordica charantia])

HSP 1 Score: 381.7 bits (979), Expect = 3.5e-102
Identity = 180/183 (98.36%), Postives = 182/183 (99.45%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENA+NGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENANNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEV+IRPDEGYYLGGTF FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVTIRPDEGYYLGGTFLFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. NCBI nr
Match: XP_022950886.1 (NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_022950887.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_023543062.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita pepo subsp. pepo] >XP_023543063.1 NEDD8-conjugating enzyme Ubc12-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 379.8 bits (974), Expect = 1.3e-101
Identity = 179/183 (97.81%), Postives = 181/183 (98.91%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENASNGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60
           MIKLFKVKEKQRELAENA NG+PTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN
Sbjct: 1   MIKLFKVKEKQRELAENAINGIPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLMN 60

Query: 61  FEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120
           FEVSIRPDEGYYLGGTF+FSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW
Sbjct: 61  FEVSIRPDEGYYLGGTFFFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDW 120

Query: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFP 180
           KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 
Sbjct: 121 KPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFFS 180

Query: 181 RCM 184
           RCM
Sbjct: 181 RCM 183

[Close]

BLAST of CSPI06G27340 vs. TAIR 10
Match: AT4G36800.1 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 338.6 bits (867), Expect = 3.2e-93
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENAS-NGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 60
           MI LFKVKEKQRE A+NA+  G   KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 61  NFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120
           NFEVSI+PD+GYY  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 121 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 180
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVGQTFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 181 PRCM 184
           PRC+
Sbjct: 181 PRCI 184

[Close]

BLAST of CSPI06G27340 vs. TAIR 10
Match: AT4G36800.2 (RUB1 conjugating enzyme 1 )

HSP 1 Score: 338.6 bits (867), Expect = 3.2e-93
Identity = 159/184 (86.41%), Postives = 170/184 (92.39%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAENAS-NGVPTKKQSAGELRLHKDISELNLPKSCNITFPNGKDDLM 60
           MI LFKVKEKQRE A+NA+  G   KKQSAGELRLHKDISELNLP SC+I+FPNGKDDLM
Sbjct: 1   MIGLFKVKEKQREQAQNATRGGASVKKQSAGELRLHKDISELNLPSSCSISFPNGKDDLM 60

Query: 61  NFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120
           NFEVSI+PD+GYY  GTF F+F VSP+YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED
Sbjct: 61  NFEVSIKPDDGYYHNGTFVFTFQVSPVYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRED 120

Query: 121 WKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTFF 180
           WKPVLNINTVIYGL+HLFTEPN EDPLNHDAAAVLRDNPKLFE+NVRRAM GGYVGQTFF
Sbjct: 121 WKPVLNINTVIYGLFHLFTEPNSEDPLNHDAAAVLRDNPKLFETNVRRAMTGGYVGQTFF 180

Query: 181 PRCM 184
           PRC+
Sbjct: 181 PRCI 184

[Close]

BLAST of CSPI06G27340 vs. TAIR 10
Match: AT2G18600.1 (Ubiquitin-conjugating enzyme family protein )

HSP 1 Score: 318.2 bits (814), Expect = 4.5e-87
Identity = 155/185 (83.78%), Postives = 164/185 (88.65%), Query Frame = 0


Query: 1   MIKLFKVKEKQRELAE-NASNGVPT-KKQSAGELRLHKDISELNLPKSCNITFPNGKDDL 60
           MI LFKVKEKQRE ++ N   G  T KKQSAGELRLHKDISELNLPKSC I+FPNGK+DL
Sbjct: 1   MIGLFKVKEKQREESQSNNGRGASTVKKQSAGELRLHKDISELNLPKSCKISFPNGKNDL 60

Query: 61  MNFEVSIRPDEGYYLGGTFYFSFTVSPIYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120
           MNFEV+I+PDEGYYL G F FSF VS +YPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE
Sbjct: 61  MNFEVTIKPDEGYYLSGNFVFSFQVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILRE 120

Query: 121 DWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAAAVLRDNPKLFESNVRRAMAGGYVGQTF 180
           DWKPVLNINTVIYGL+HLFTEPN EDPLNH+AAAVLRDNPK FE NVRRAM GG VGQT 
Sbjct: 121 DWKPVLNINTVIYGLFHLFTEPNYEDPLNHEAAAVLRDNPKTFEYNVRRAMMGGQVGQTS 180

Query: 181 FPRCM 184
           FPRCM
Sbjct: 181 FPRCM 185

[Close]

BLAST of CSPI06G27340 vs. TAIR 10
Match: AT3G08690.1 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 104.8 bits (260), Expect = 7.8e-23
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 33  RLHKDISELNLPKSCNITFPNGKDDLMNFEVSIR-PDEGYYLGGTFYFSFTVSPIYPHEA 92
           R+ K++ +L      N +     +D+ +++ +I  P E  Y GG F  S    P YP + 
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64

Query: 93  PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAA 152
           PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ V+  +  L T+PN +DPL  + A
Sbjct: 65  PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 153 AVLRDNPKLFESNVR 167
            + + +   +ES  R
Sbjct: 125 HMYKTDRSKYESTAR 139

[Close]

BLAST of CSPI06G27340 vs. TAIR 10
Match: AT3G08690.2 (ubiquitin-conjugating enzyme 11 )

HSP 1 Score: 104.8 bits (260), Expect = 7.8e-23
Identity = 50/135 (37.04%), Postives = 77/135 (57.04%), Query Frame = 0


Query: 33  RLHKDISELNLPKSCNITFPNGKDDLMNFEVSIR-PDEGYYLGGTFYFSFTVSPIYPHEA 92
           R+ K++ +L      N +     +D+ +++ +I  P E  Y GG F  S    P YP + 
Sbjct: 5   RILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPFKP 64

Query: 93  PKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLYHLFTEPNDEDPLNHDAA 152
           PKV  KTKVYHPNI+  G++CL+IL+E W P L I+ V+  +  L T+PN +DPL  + A
Sbjct: 65  PKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPEIA 124

Query: 153 AVLRDNPKLFESNVR 167
            + + +   +ES  R
Sbjct: 125 HMYKTDRSKYESTAR 139

The following BLAST results are available for this feature:

BLAST of CSPI06G27340 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SDY5	4.5e-92	86.41	NEDD8-conjugating enzyme Ubc12 OS=Arabidopsis thaliana OX=3702 GN=RCE1 PE=1 SV=1	[more]
Q9ZU75	6.3e-86	83.78	Probable NEDD8-conjugating enzyme Ubc12-like OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q6DCZ9	2.0e-63	61.75	NEDD8-conjugating enzyme Ubc12 OS=Xenopus laevis OX=8355 GN=ube2m PE=2 SV=1	[more]
Q6P8D9	2.0e-63	61.75	NEDD8-conjugating enzyme Ubc12 OS=Xenopus tropicalis OX=8364 GN=ube2m PE=2 SV=1	[more]
A3KN22	4.4e-63	61.20	NEDD8-conjugating enzyme Ubc12 OS=Bos taurus OX=9913 GN=UBE2M PE=2 SV=1	[more]

BLAST of CSPI06G27340 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KJ88	4.1e-104	100.00	UBC core domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G487630 PE...	[more]
A0A5D3CPJ2	1.0e-102	98.91	NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_s...	[more]
A0A1S3B168	1.0e-102	98.91	NEDD8-conjugating enzyme Ubc12 OS=Cucumis melo OX=3656 GN=LOC103484703 PE=3 SV=1	[more]
A0A6J1BVM5	1.7e-102	98.36	NEDD8-conjugating enzyme Ubc12 OS=Momordica charantia OX=3673 GN=LOC111005769 PE...	[more]
A0A6J1GG19	6.5e-102	97.81	NEDD8-conjugating enzyme Ubc12-like OS=Cucurbita moschata OX=3662 GN=LOC11145384...	[more]

BLAST of CSPI06G27340 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657802.1	8.4e-104	100.00	NEDD8-conjugating enzyme Ubc12 [Cucumis sativus] >KGN48442.1 hypothetical protei...	[more]
XP_038883862.1	3.2e-103	98.91	NEDD8-conjugating enzyme Ubc12 [Benincasa hispida] >XP_038883863.1 NEDD8-conjuga...	[more]
XP_008440154.1	2.1e-102	98.91	PREDICTED: NEDD8-conjugating enzyme Ubc12 [Cucumis melo] >TYK12954.1 NEDD8-conju...	[more]
XP_022133087.1	3.5e-102	98.36	NEDD8-conjugating enzyme Ubc12 [Momordica charantia] >XP_022133088.1 NEDD8-conju...	[more]
XP_022950886.1	1.3e-101	97.81	NEDD8-conjugating enzyme Ubc12-like [Cucurbita moschata] >XP_022950887.1 NEDD8-c...	[more]

BLAST of CSPI06G27340 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36800.1	3.2e-93	86.41	RUB1 conjugating enzyme 1	[more]
AT4G36800.2	3.2e-93	86.41	RUB1 conjugating enzyme 1	[more]
AT2G18600.1	4.5e-87	83.78	Ubiquitin-conjugating enzyme family protein	[more]
AT3G08690.1	7.8e-23	37.04	ubiquitin-conjugating enzyme 11	[more]
AT3G08690.2	7.8e-23	37.04	ubiquitin-conjugating enzyme 11	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SMART	SM00212	ubc_7	coord: 32..174 e-value: 8.1E-34 score: 128.4
None	No IPR available	PANTHER	PTHR24068:SF379	SUBFAMILY NOT NAMED	coord: 11..173
None	No IPR available	PANTHER	PTHR24068	UBIQUITIN-CONJUGATING ENZYME E2	coord: 11..173
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	GENE3D	3.10.110.10	Ubiquitin Conjugating Enzyme	coord: 25..183 e-value: 1.5E-46 score: 160.0
IPR016135	Ubiquitin-conjugating enzyme/RWD-like	SUPERFAMILY	54495	UBC-like	coord: 24..181
IPR000608	Ubiquitin-conjugating enzyme E2	PFAM	PF00179	UQ_con	coord: 33..168 e-value: 1.1E-37 score: 128.7
IPR000608	Ubiquitin-conjugating enzyme E2	PROSITE	PS50127	UBC_2	coord: 29..174 score: 38.224892
IPR000608	Ubiquitin-conjugating enzyme E2	CDD	cd00195	UBCc	coord: 33..167 e-value: 2.40459E-40 score: 131.556
IPR023313	Ubiquitin-conjugating enzyme, active site	PROSITE	PS00183	UBC_1	coord: 101..116

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G27340.1	CSPI06G27340.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045116	protein neddylation
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005634	nucleus
molecular_function	GO:0016746	acyltransferase activity
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0019788	NEDD8 transferase activity
molecular_function	GO:0004839	ubiquitin activating enzyme activity