
CSPI06G27200 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAAATTTGCAATGCAAGAACACGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAATGCTCCCGAGAGGCCGTCTTTTTGGAATTTCATTCAAGAAACTGTGGCTATTTTGAAGAAATCTCATTCCACTCCATTGGAGAAAATCAAGAGTCTCATTCACCAAATGCAGTTGCAGTTTTTCCCTCCCAATTTAGAGTAATTTCCTTCCCTTTAAGAAACTCTGTTTTCTTACTTTGTTCTATTTGGCTTCCTAAATTGGAGATTAGAGGGCTTGATATGTCAATATATTCATAGAATATTAGGTTAAAAATCAATCTTAATCCTTCAAATTTCAAGAAAAATAACAATTTAGTTGTTCAAATTTAGTTAGTAACGATTGACTCCAAATTAATCTTATTATGAAAAATATTTGTGAAGTTTAATGAATTTTTTTACCTAATAGATGAATTGTAATTTAGTTAGTAACGATTGACTCCAAATTAATCTTATTATGAAAAATATTTTTGAAGTTTAATGAATTTTTTTACTTAATAGATGATTTGATTTCTTTTATAAACTAAGATAGATTAAGTCGATTAATAAAGTTGACAGTTAATTTTGAAGAAAAAAGTTCATAACAAAAACTAACTTCTTACAAAGTATATAGAAGATAAATCGTTACTTATTACAAAGTATATAGAAGATAAATCGTTACTTATTCAAGTGTACGAATTAAATTGTTAAAAATTTTGGTGTAAGTCGTTACTAACTTCATGAACTAAATTGTTATCTATGTAAAAGTTTAAGAACTAAATTATTTCAAATTTAAGAATACAAGTGATAATTACAAGTTTGAAAATAAAATTGGTTATTTCTATTAAAGTTTAAGTGACCTATAATTTTTTTTGTTTTTATTTTTCTGGTTCACAAGAATGTCCATTGGCATCAAATATTTTACGAATCCGTTATAGAAAATATGGATAGTTTTTTCTAACCCTTTTATTATATCTAATAAGTCAAGTATCAGGTTATTATTTTATTTTATTTATTCATTTTATATAGAAAAAATTGTGTTATGCAGTTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAATGAAAGAAGCAGTGGAAAAGAGCTTTGGAGCAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTAGCAGATAATAAGGACAGGGTCAAGAACAAACATGATGAGCTTTGATCATCCATGTCCACTTTCTTAAAACTCTGTTATTTTTCTTTGAAACTTAGAGATTAAATTCAATAGGCTTCTTGTGACAGATGAGGATCACTTTGTGCTTGTGCCTTACCCTAGTCACTAACCTTCTACCGTGAATGAAGTCTTTAGAAATGATTT ATGGAAATTTGCAATGCAAGAACACGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAATGCTCCCGAGAGGCCGTCTTTTTGGAATTTCATTCAAGAAACTGTGGCTATTTTGAAGAAATCTCATTCCACTCCATTGGAGAAAATCAAGAGTCTCATTCACCAAATGCAGTTGCAGTTTTTCCCTCCCAATTTAGATTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAATGAAAGAAGCAGTGGAAAAGAGCTTTGGAGCAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTAGCAGATAATAAGGACAGGGTCAAGAACAAACATGATGAGCTTTGATCATCCATGTCCACTTTCTTAAAACTCTGTTATTTTTCTTTGAAACTTAGAGATTAAATTCAATAGGCTTCTTGTGACAGATGAGGATCACTTTGTGCTTGTGCCTTACCCTAGTCACTAACCTTCTACCGTGAATGAAGTCTTTAGAAATGATTT ATGGAAATTTGCAATGCAAGAACACGAAGCAGATTGCTTCTTGTGTTGTTAATTTTGATGCTTCATGTTGCTTCGTGTTTTGCAGATTCTAACAATGCTCCCGAGAGGCCGTCTTTTTGGAATTTCATTCAAGAAACTGTGGCTATTTTGAAGAAATCTCATTCCACTCCATTGGAGAAAATCAAGAGTCTCATTCACCAAATGCAGTTGCAGTTTTTCCCTCCCAATTTAGATTTTAGGAGTAGTGATGAAACAAAGGGTGGTGTGGTTGATGAAATGAAAGAAGCAGTGGAAAAGAGCTTTGGAGCAAGCAAAGATGCAGTTGAAGAATCTGCAAAATCTGCAGCAAAAGTTATGGAGGAAGCAGTAGACAAAGTTAAAGAGAACTTAGCAGATAATAAGGACAGGGTCAAGAACAAACATGATGAGCTTTGA MEICNARTRSRLLLVLLILMLHVASCFADSNNAPERPSFWNFIQETVAILKKSHSTPLEKIKSLIHQMQLQFFPPNLDFRSSDETKGGVVDEMKEAVEKSFGASKDAVEESAKSAAKVMEEAVDKVKENLADNKDRVKNKHDEL* Homology
BLAST of CSPI06G27200 vs. ExPASy TrEMBL
Match: A0A0A0KFX9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G487000 PE=4 SV=1) HSP 1 Score: 273.5 bits (698), Expect = 5.2e-70 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of CSPI06G27200 vs. ExPASy TrEMBL
Match: A0A5D3CLZ9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005640 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 131/144 (90.97%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of CSPI06G27200 vs. ExPASy TrEMBL
Match: A0A1S3B154 (uncharacterized protein LOC103484692 OS=Cucumis melo OX=3656 GN=LOC103484692 PE=4 SV=1) HSP 1 Score: 251.1 bits (640), Expect = 2.7e-63 Identity = 131/144 (90.97%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of CSPI06G27200 vs. ExPASy TrEMBL
Match: A0A6J1ILF3 (uncharacterized protein LOC111478091 OS=Cucurbita maxima OX=3661 GN=LOC111478091 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 117/149 (78.52%), Postives = 128/149 (85.91%), Query Frame = 0
BLAST of CSPI06G27200 vs. ExPASy TrEMBL
Match: A0A6J1GEE2 (uncharacterized protein LOC111453420 OS=Cucurbita moschata OX=3662 GN=LOC111453420 PE=4 SV=1) HSP 1 Score: 214.2 bits (544), Expect = 3.7e-52 Identity = 117/147 (79.59%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of CSPI06G27200 vs. NCBI nr
Match: XP_011657792.2 (uncharacterized protein LOC105435898 [Cucumis sativus] >KAE8647479.1 hypothetical protein Csa_003249 [Cucumis sativus]) HSP 1 Score: 273.5 bits (698), Expect = 1.1e-69 Identity = 143/144 (99.31%), Postives = 143/144 (99.31%), Query Frame = 0
BLAST of CSPI06G27200 vs. NCBI nr
Match: XP_008440136.1 (PREDICTED: uncharacterized protein LOC103484692 [Cucumis melo] >TYK12967.1 uncharacterized protein E5676_scaffold255G005640 [Cucumis melo var. makuwa]) HSP 1 Score: 251.1 bits (640), Expect = 5.7e-63 Identity = 131/144 (90.97%), Postives = 137/144 (95.14%), Query Frame = 0
BLAST of CSPI06G27200 vs. NCBI nr
Match: XP_038881383.1 (uncharacterized protein LOC120072918 [Benincasa hispida]) HSP 1 Score: 224.6 bits (571), Expect = 5.7e-55 Identity = 123/144 (85.42%), Postives = 130/144 (90.28%), Query Frame = 0
BLAST of CSPI06G27200 vs. NCBI nr
Match: XP_023544688.1 (uncharacterized protein LOC111804199 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 216.1 bits (549), Expect = 2.0e-52 Identity = 118/145 (81.38%), Postives = 128/145 (88.28%), Query Frame = 0
BLAST of CSPI06G27200 vs. NCBI nr
Match: XP_022950287.1 (uncharacterized protein LOC111453420 [Cucurbita moschata]) HSP 1 Score: 214.2 bits (544), Expect = 7.7e-52 Identity = 117/147 (79.59%), Postives = 128/147 (87.07%), Query Frame = 0
BLAST of CSPI06G27200 vs. TAIR 10
Match: AT5G64820.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16850.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 55.1 bits (131), Expect = 5.6e-08 Identity = 41/136 (30.15%), Postives = 76/136 (55.88%), Query Frame = 0
BLAST of CSPI06G27200 vs. TAIR 10
Match: AT1G16850.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: response to salt stress; LOCATED IN: endomembrane system; EXPRESSED IN: leaf apex, leaf whorl, male gametophyte, flower, leaf; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, LP.10 ten leaves visible, petal differentiation and expansion stage, LP.08 eight leaves visible; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64820.1); Has 24 Blast hits to 24 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 53.1 bits (126), Expect = 2.1e-07 Identity = 37/119 (31.09%), Postives = 62/119 (52.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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