CSPI06G27110 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G27110
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	protein SLOW GREEN 1, chloroplastic
Location	Chr6: 23898489 .. 23902054 (-)
RNA-Seq Expression	CSPI06G27110
Synteny	CSPI06G27110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGCCGTTCGGCTATTCGTCAGAAATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAGAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGTAAGGTTTTTGCTCGACCGTGTGATATGAAAATAGATTTATGTTTCTTTAGACTGATAGTTTAGGTTTTCATGTTACTTGGTGCAAGTGTTAAATGAAGTTATTATTTATGTACTAAGCCAGTTTGATGTTTACATTAGAGATTGTTTCGGGAAAAAATGAATCCTGAACTGACTGAGGGTGGTTAATAACAAGGTGAATTATTGTCTTTGAAAGTAATGTTAAGACACCAGCTTTTGAGCAAGAACTGCTAGGAAATGACTTCTATGAGAACAGTTGATGTGGTTTTTTCGCTCTATATATTCTCTATGATTTCTAGTTCTCCTTATAATTTGAGCATTAGTTTCTTTCCATTATATCAATGAAAAGTTTTGTCTTCGATTAAAAAAAAAGTTATATGATTTATACCCTAATGTTTTATTTGAACTTGAATTTTTACATCATGCTGGCCAAGTTTTCTGAACGTATTGTAGTTGTGAAGGCAATTTTTGCTCTTCAGTCCCATTCATGTTATTCAAGCATGACATAAGATACTGCCTTAGAAATCTTTTAACATCTCAAGCGAAGATACTAACTAATATGTTAGCATGTAATAAAAACTTTAATATTGCCATCTCATCTGTGGGCTGCCTTGCTAGTTTTGAAGTTGCAACCTTTTATAGCTTTTCTCGATGTCTTTAACAAGGTATGTCAATGCTTAATTTGAAACTTTCAATTTGCACTTTCTTCAGGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGTCATTTGCTACTTATTTCTAGGGCATGTTTGGATTGACTTTCTAAGTGCTTAGTAAATACTTTTTCTTGAACTTAACACTTACTCACTATGTTTCACCCTCGGGGATTTCCTGCTTCTTACACTGTATCTATCTGCGTAGAAGGGTGCAAATGTTTGGACGCCTAGCATTGAAAAATTATCTGTCTAACTGCCTGTTATATGCATTTGAATTACTCCAAAAAGTTGTTAAGAACTAAAGTTATGAAAGACTGGATTGTATATTGACTAGTACAAGATTAAAAAAAAATGTCATTATGTATTCCTATTTTTAGGGTCTAGATGGTATGATCTTCACGGTGTCTTAAGGTTGCTTTCATTTTTTATAATCATACTGTTTCGTGGAAAAAGCAACTTTTATGGAAATGTGGAAAAAGCATAACTTTTATGAAATGAAACATGATAATCATAAAGCTAAGATTTTTCCAGTCAACACAAATTTCTTGGAATGCTAGAGAGAAATCACATAACTTTTATGGAAATGTGGAGATGGCAATGGCACTTTAGATCTGGCTTGTTATGCAGCCTCTAGATAAAGTTCCTTCTCTTGCCCTTTTAAATTACTTTTTTTTTTTATTAATTGATTGCCAATTATTGAGCTTTTCTGTTATTATTTTAAATCTTTAAGCATTTTAGAATTTCTAATTTTCCACCTTAATGCTCTGGATTCTTGTCCAACAAAGTAGTTTGTCTTTCAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGTTCTGACATAATTTTCAGTCTACCTATCTTTTTTATCATAATTTTGGATTAGTCCATTTCCACACTGCATGTCAAATACCTCAGCGAGTCAGCGTACTAGGGCACTTATGTGTCACATTAATATGGAGGAAGTCATATTTTTTCTTTGTCAAGAACTGGTATGAATGTTTTATGATTATTGGCATTCAATTCAACCACACGATCTGCACCAAAGATATGGTTGTCTGTACTTGGGACATTTATTATTGATGTTAATTTTAGGTTTGATTCAACTGAATAATATGAATAGAGAATTGATTAGTGGGAACAATAAGATGAAAATGAAAGTAGGATTTAGCGAAGCATCACGATTCACTTGGCTTGTTGAAGAGGAGATTTATCTTTGGGGAAAGGATGAAATACTGAAATGAAAGATATCTAACTATATGCATTTCTTTCTTGCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAATTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTACTCTGATTATTAGTTTGAGAGTGTATCGAATGGGTTCATACCACTGCCAACACACCTGACTACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAAAACAAAAGTTGTTGAGGGTGATCTTTAATCGTCGGTAGTGAAATCAGGTTGTAATGGCTAAAATATAAACTATTGGACTCGTATTGGCTGCTTGATGAAAACGAACAAGAAAGACTGCACGCAGTGGAGCGCTTGCTCAGAATCTAATTCCTTGACTGAAAATTTAGTTCAACAATATCATGGAGGAAACAAAGTAGAAATGGAGATTATCTGGAGCTGTTTTTATGAGTGCAGTGGAAGAATGGTTGGTTCAAAATAGTTGTACAAGTTGAATTTGAAGTAGTTCAGCGAGCAAACGGACCTGATTTGCTTTACTCCCCCCTCTCTCTCTCTCACTCTTCTTTTGAATCTTTTCGATTTATGAGAGTTCTAAATTATCTGAATCTGGAATTTTCATATTCAGTTGATGAAACGTGAC

mRNA sequence

AGCCGTTCGGCTATTCGTCAGAAATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAGAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAATTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGAAGCCAAGAAGAAAAGGGTACTCTGATTATTAGTTTGAGAGTGTATCGAATGGGTTCATACCACTGCCAACACACCTGACTACTAAAACTCTGTAGTTAACCGTGCTTGTGCCATGTCGGGCAAAAACAAAAGTTGTTGAGGGTGATCTTTAATCGTCGGTAGTGAAATCAGGTTGTAATGGCTAAAATATAAACTATTGGACTCGTATTGGCTGCTTGATGAAAACGAACAAGAAAGACTGCACGCAGTGGAGCGCTTGCTCAGAATCTAATTCCTTGACTGAAAATTTAGTTCAACAATATCATGGAGGAAACAAAGTAGAAATGGAGATTATCTGGAGCTGTTTTTATGAGTGCAGTGGAAGAATGGTTGGTTCAAAATAGTTGTACAAGTTGAATTTGAAGTAGTTCAGCGAGCAAACGGACCTGATTTGCTTTACTCCCCCCTCTCTCTCTCTCACTCTTCTTTTGAATCTTTTCGATTTATGAGAGTTCTAAATTATCTGAATCTGGAATTTTCATATTCAGTTGATGAAACGTGAC

Coding sequence (CDS)

ATGGGTTCAACTTCAGCTTCAACTTTCTCAGTTTCATCTCAAATTGAACTTCCCAGACCACCCAAATTCTCAAGCTACAATGTCCGGGCATTGTCTAAGTGTCAATATAACATTCTTCAGAAGAATTACAAACTATCCTCCCAAAGCTTGTTCTGCTCACATGCGAGAATTTTTCATTCCCCCATTCACAATACCCCCTTCTCAAACCTCTCTGAGTCCGATATACGTCGTTTTAACTCACCCCAGATAAAAATTTCGAAGTATTTCATTGAAAAATTTGTGGGTTTTCTTGTTGGGTCATTTATCTTCATGGGTTGTTTCAATGTAAGATATGTCAGGGCATTGCCTGCTCAGACAAGTAACAAAAACCCGATATTGGCTGAAAAAGCTCAAGTTCCAGAGGAGGATAGTGAAGAGGTGATGTGGGAGAGGATCTTGGAGCATGATCCAAGTAATGTTGATACTCTGAAAGCTGTTTTGTATGGGAAAATGAGGAGTGGAAAGACAGAGAACGCCGTTAAGTATGTTAAGAGGTTGATTGATCTTGAGCCTGATGAGGTTGAATGGAGAATTTTGTTGGCTCTTTGTTATGAGATATTGGGGGAGCTGGGCACGGCTAAAAGATTGTTCATGGAAATTCTGAAGCAGAAACCTCTTTTGGTTAGAGCTCTGCATGGTTTGGCGTTAGTGATGCATAAGAACAATGAAGGTGAATCTGTCTTTGAGATGCTCAATAAGGCACTAGATATTGCTCGTGATGAGAAAAAACTTACCGAACATAGAAGCATCGGGATACTAATTGCTCAAATGCATGTTGTGAAGGGGGAACTGGAAGAGGGCTTGAAGAAGTTCCAAAATCTTGTTGAGGAAAACCCAAGGGATTTTCGACCCCATCTCTGCCAGGGGATTATATACAGTCTGCTGGACAAAAAAAAGGAAGCTGCTGAGCAGTTCGAAACATATCAGGCCCTTGTGCCTGATGAATTTCCTCAAAGGGAATTTATTGATGACGTTATGTTGTCGGCTACGACTGCATCACGGGAACAATTCCAGAAGGAATTTGATGCTGAATTTACAAACAAGAAGTGA

Protein sequence

MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHSPIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTSNKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTNKK*

Homology

[Close]

BLAST of CSPI06G27110 vs. ExPASy Swiss-Prot
Match: Q9LS48 (protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.4e-38
Identity = 106/296 (35.81%), Postives = 166/296 (56.08%), Query Frame = 0


Query: 46  SSQSLFCSHARIFHSPIHNTPFSNLSESDIR-RFNSPQIKISKYFIEKFVGF-----LVG 105
           +S SL  S   +  +P+            IR R +S Q      F EKF  F     L+G
Sbjct: 7   ASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAILIG 66

Query: 106 SFIFM-GCFNVRYVRA-LPAQTSNKNPILAEKAQVPEEDSEEVM-WERILEHDPSNVDTL 165
           + + M G F+   V+A  P  T  K        +V EE   E+     +L+  P  V+TL
Sbjct: 67  AAVSMTGKFSTLPVKAESPVTTIEKT-----YEEVKEEKLSEITPLSELLDSTPEAVETL 126

Query: 166 KAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELG---TAKRLFMEI 225
           +++L  K+  G+ E A+K ++RL+  +P+E EW+ L+A    +LGE+G    A+++F EI
Sbjct: 127 RSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMA---RLLGEMGRPENARQMFEEI 186

Query: 226 LKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVV 285
           L++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IAQ+H +
Sbjct: 187 LQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 246

Query: 286 KGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEF 330
           +  ++E LK ++ L +E+P+DFRP+ C+G+IYSLLDK  EA EQF  Y+ L P +F
Sbjct: 247 QKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

[Close]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL
Match: A0A0A0KHZ0 (TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 PE=4 SV=1)

HSP 1 Score: 709.9 bits (1831), Expect = 5.4e-201
Identity = 361/362 (99.72%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHA+IFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 362

[Close]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL
Match: A0A5D3CPL4 (Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G005710 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.0e-179
Identity = 329/362 (90.88%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  +IFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 360

[Close]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL
Match: A0A1S3B0E6 (LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103484686 PE=4 SV=1)

HSP 1 Score: 638.3 bits (1645), Expect = 2.0e-179
Identity = 329/362 (90.88%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  +IFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 360

[Close]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL
Match: A0A6J1HF02 (protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111463369 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 1.5e-139
Identity = 271/362 (74.86%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGS SA  FSV S+IELP  PKFS YNVR   K ++ + +KNY  +S+SL  S ++ F+S
Sbjct: 1   MGSISA--FSVCSKIELP-GPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 363
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL
Match: A0A6J1BU39 (protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111005371 PE=4 SV=1)

HSP 1 Score: 502.3 bits (1292), Expect = 1.7e-138
Identity = 263/362 (72.65%), Postives = 300/362 (82.87%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGSTS S F V SQI LP  PK SSYNVR     ++  L+KNY         + A+ FH 
Sbjct: 1   MGSTSTSAFLVCSQIILP-GPKVSSYNVRKSPNSRFIGLRKNYN--------AVAKFFHF 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           P  N P S LSESD  R +  Q  +SKYF+EKFV  L+GSFIFMGCFNVRY  ALPAQ S
Sbjct: 61  PTLNPPVSKLSESDSCRSSPSQRNLSKYFLEKFVALLIGSFIFMGCFNVRYAMALPAQRS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +K+P L EK     EDSEE M ERILEH+P N+DTLKAVLYGKMRSGKT+ A+KYV+RLI
Sbjct: 121 SKSPTLDEKTDTLSEDSEEEMRERILEHEPRNIDTLKAVLYGKMRSGKTKEAIKYVQRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEP+EVEWR+L+ALCYE +G+L TAKRLFMEIL++KPLLVRALHGLALVMHKN EG+SV
Sbjct: 181 DLEPEEVEWRLLMALCYETMGQLDTAKRLFMEILEKKPLLVRALHGLALVMHKNKEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           F+MLNKALDIARDEKK+TE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FDMLNKALDIARDEKKVTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKK+EAAEQFE Y+A+VPDEFPQ+EFIDD++LSATTASREQF+KEF AEF+ 
Sbjct: 301 QGIIYSLLDKKREAAEQFEMYRAVVPDEFPQKEFIDDIVLSATTASREQFEKEFAAEFSY 353

Query: 361 KK 363
           KK
Sbjct: 361 KK 353

[Close]

BLAST of CSPI06G27110 vs. NCBI nr
Match: XP_004141968.1 (protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical protein Csa_003836 [Cucumis sativus])

HSP 1 Score: 709.9 bits (1831), Expect = 1.1e-200
Identity = 361/362 (99.72%), Postives = 362/362 (100.00%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHA+IFHS
Sbjct: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHAKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS
Sbjct: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI
Sbjct: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 362

[Close]

BLAST of CSPI06G27110 vs. NCBI nr
Match: XP_008440127.1 (PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis melo] >TYK12974.1 protein SLOW GREEN 1 [Cucumis melo var. makuwa])

HSP 1 Score: 638.3 bits (1645), Expect = 4.1e-179
Identity = 329/362 (90.88%), Postives = 341/362 (94.20%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           M STS S FSVSSQIELP PPKFSSYNVRALS  +++ILQKNYKLSSQSLF S  +IFHS
Sbjct: 1   MASTSTSAFSVSSQIELPGPPKFSSYNVRALSNFRFSILQKNYKLSSQSLFYS-PKIFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHNT FSNLSESDIRR  SPQIK+SKY +EKFVGFLVGSFIFMGCFN+RY RALPAQTS
Sbjct: 61  PIHNTLFSNLSESDIRRSTSPQIKLSKYIVEKFVGFLVGSFIFMGCFNLRYARALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP LAEKAQ+PE DSEE MWERILEHDPSNVDTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTLAEKAQIPEGDSEE-MWERILEHDPSNVDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE LGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALCYETLGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARDEKKL EHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC
Sbjct: 241 FEMLNKALDIARDEKKLAEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE YQALVPDEFPQREFIDD+MLSATTASREQFQKEFDAEFTN
Sbjct: 301 QGIIYSLLDKKKEAAEQFEIYQALVPDEFPQREFIDDIMLSATTASREQFQKEFDAEFTN 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 360

[Close]

BLAST of CSPI06G27110 vs. NCBI nr
Match: XP_038880966.1 (protein SLOW GREEN 1, chloroplastic [Benincasa hispida])

HSP 1 Score: 587.4 bits (1513), Expect = 8.4e-164
Identity = 302/362 (83.43%), Postives = 328/362 (90.61%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGSTS S FSVSSQIEL   PKFSSYNVRAL  C+++ILQKN+K +SQSLF S A+ FHS
Sbjct: 1   MGSTSTSAFSVSSQIELLHGPKFSSYNVRALPNCRFSILQKNHKPTSQSLFYSAAKNFHS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
           PIHN PFSNLSESDIRR  S QIKI K+++E+FVGFLVGSFIFMGCFNVRY RALP QTS
Sbjct: 61  PIHNPPFSNLSESDIRRSTSTQIKIHKHYVERFVGFLVGSFIFMGCFNVRYARALPTQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
           +KNP +AEK+Q  EEDSEE M ERILEHDPSN+DTLKAVLYGKMRSGKTE A+KYVKRLI
Sbjct: 121 SKNPTMAEKSQALEEDSEEEMRERILEHDPSNIDTLKAVLYGKMRSGKTEEAIKYVKRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLAL YE  G+L TAK LFMEIL++KPLLVRALHGLALVMHKNNEGESV
Sbjct: 181 DLEPDEVEWRLLLALYYETFGQLDTAKTLFMEILEKKPLLVRALHGLALVMHKNNEGESV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKAL IARDEKKLTE RSIGILIAQMHVVKGELEEGLKKFQ+LV+ENPRDFRP+LC
Sbjct: 241 FEMLNKALAIARDEKKLTEQRSIGILIAQMHVVKGELEEGLKKFQDLVDENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLDKKKEAAEQFE Y+ALVPDEFPQREFIDDV+L+A TASREQFQKEFDAEF +
Sbjct: 301 QGIIYSLLDKKKEAAEQFEAYRALVPDEFPQREFIDDVVLAAMTASREQFQKEFDAEFMH 360

Query: 361 KK 363
           KK
Sbjct: 361 KK 362

[Close]

BLAST of CSPI06G27110 vs. NCBI nr
Match: KAG6595098.1 (protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 507.7 bits (1306), Expect = 8.4e-140
Identity = 272/362 (75.14%), Postives = 305/362 (84.25%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGSTSA  FSV S+IELP  PKFS YNVR   K ++ + +KNY  +S+SL  S ++ F+S
Sbjct: 1   MGSTSA--FSVFSKIELP-VPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 363
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CSPI06G27110 vs. NCBI nr
Match: XP_022963051.1 (protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata])

HSP 1 Score: 505.8 bits (1301), Expect = 3.2e-139
Identity = 271/362 (74.86%), Postives = 304/362 (83.98%), Query Frame = 0


Query: 1   MGSTSASTFSVSSQIELPRPPKFSSYNVRALSKCQYNILQKNYKLSSQSLFCSHARIFHS 60
           MGS SA  FSV S+IELP  PKFS YNVR   K ++ + +KNY  +S+SL  S ++ F+S
Sbjct: 1   MGSISA--FSVCSKIELP-GPKFSGYNVRPSPKFRFTMFRKNYNPTSKSLIHSISKHFNS 60

Query: 61  PIHNTPFSNLSESDIRRFNSPQIKISKYFIEKFVGFLVGSFIFMGCFNVRYVRALPAQTS 120
            IH+ PFSNLSESD R F + Q   S YF+EK VGFLV  FIFMGCFNVR+V ALPAQTS
Sbjct: 61  HIHDAPFSNLSESDKRCFPALQRNSSNYFVEKLVGFLVWLFIFMGCFNVRHVVALPAQTS 120

Query: 121 NKNPILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLI 180
            K+P +       +EDSEE M ERILEHD  N+DTLKAVLYGKM SGKTE A+KYV RLI
Sbjct: 121 GKSPTM-------DEDSEEEMRERILEHDSRNIDTLKAVLYGKMSSGKTEEAIKYVLRLI 180

Query: 181 DLEPDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESV 240
           DLEPDEVEWR+LLALCYE +GEL  AK LF+EIL++ PLLVRALHGLALVMHKNNEG+SV
Sbjct: 181 DLEPDEVEWRLLLALCYEKMGELEMAKGLFVEILEKNPLLVRALHGLALVMHKNNEGQSV 240

Query: 241 FEMLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLC 300
           FEMLNKALDIARD KK+TE RSIGILIAQMHVVKGELEEGLKKFQ LVEENPRDFRP+LC
Sbjct: 241 FEMLNKALDIARDHKKVTEQRSIGILIAQMHVVKGELEEGLKKFQELVEENPRDFRPYLC 300

Query: 301 QGIIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFTN 360
           QGIIYSLLD+K+EAAEQFETY+ALVPDEFPQREF+DDVMLSATTA+REQFQKEFDAEF+ 
Sbjct: 301 QGIIYSLLDRKEEAAEQFETYRALVPDEFPQREFMDDVMLSATTATREQFQKEFDAEFSY 352

Query: 361 KK 363
           KK
Sbjct: 361 KK 352

[Close]

BLAST of CSPI06G27110 vs. TAIR 10
Match: AT4G39470.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 292.4 bits (747), Expect = 5.2e-79
Identity = 150/285 (52.63%), Postives = 212/285 (74.39%), Query Frame = 0


Query: 79  NSPQIKISKYFIE----KFVGFLVGSFIFMGCFNVRYVRALPAQTSNKNPILAEKAQVPE 138
           +S  +  SK F++    K    LVGSF+F+G  + +   ALP  T      +  +A++  
Sbjct: 65  SSTSLLSSKDFVQMLARKAAILLVGSFVFLGFCSSKPALALPTAT------VVSQAEL-- 124

Query: 139 EDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLA 198
              +E M+E++LE++P N++ +KAV+Y KMR GK E+AVKYV++L+ LEP EVEW++L A
Sbjct: 125 --EDEKMFEKLLENEPENMEAMKAVVYKKMRRGKNEDAVKYVEKLMKLEPHEVEWKLLEA 184

Query: 199 LCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDE 258
           LCYE +GEL  AKRL+ +ILK++PLL+RALHGLA+VMHK ++  SVF+ML +A+++AR  
Sbjct: 185 LCYETMGELSKAKRLYKDILKEQPLLIRALHGLAMVMHKTHD-TSVFDMLIEAMEVARQG 244

Query: 259 KKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEA 318
            ++TE R+I +LI QMH+V+G+ EEGLK FQ +V +NPRDFRP+LCQGI+YSL+DKK+EA
Sbjct: 245 NRVTEERNIQVLIGQMHIVEGQFEEGLKIFQQMVNDNPRDFRPYLCQGIVYSLMDKKEEA 304

Query: 319 AEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAEFT 360
           A+QFE Y +LVP EFPQ+ F+DDV L+A   SRE+ Q  F A+FT
Sbjct: 305 AQQFEIYWSLVPGEFPQKGFLDDVALAAQAKSRERLQNTFKAKFT 338

[Close]

BLAST of CSPI06G27110 vs. TAIR 10
Match: AT3G53560.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 160.2 bits (404), Expect = 3.1e-39
Identity = 94/235 (40.00%), Postives = 139/235 (59.15%), Query Frame = 0


Query: 124 PILAEKAQVPEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLE 183
           P +  K  V  E+ E  + E ++ H PS+VD L++++  K++S K   AV+ + RLI LE
Sbjct: 102 PSVESKENVTLEEEERALDEHLITH-PSDVDALRSLMEVKIKSRKLTEAVEVIDRLIKLE 161

Query: 184 PDEVEWRILLALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNN-EGESVFE 243
           P+E EW +L A  +   G+L  AK  F EIL + PL V A HGL +       + + V  
Sbjct: 162 PEEKEWPVLKANIFTYSGDLDLAKTGFEEILAKDPLRVEAYHGLLMAYSDAGLDLKEVES 221

Query: 244 MLNKALDIARDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQG 303
            + +A+   + E    + R   +L+AQ+ V++G+  E LK +Q LV+E PRDFRP+LCQG
Sbjct: 222 RIEEAMLKCKKENNQNDFRDFKLLVAQIRVIEGKHSEALKLYQELVKEEPRDFRPYLCQG 281

Query: 304 IIYSLLDKKKEAAEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKEFDAE 358
           IIY+LL KK +A EQF+ ++ LVP   P RE+  D M+ AT    E+ Q+E   E
Sbjct: 282 IIYTLLKKKDKAEEQFDNFRKLVPKNHPYREYFMDNMI-ATKLFSEKAQREMAEE 334

[Close]

BLAST of CSPI06G27110 vs. TAIR 10
Match: AT3G18420.1 (Protein prenylyltransferase superfamily protein )

HSP 1 Score: 159.5 bits (402), Expect = 5.2e-39
Identity = 106/296 (35.81%), Postives = 166/296 (56.08%), Query Frame = 0


Query: 46  SSQSLFCSHARIFHSPIHNTPFSNLSESDIR-RFNSPQIKISKYFIEKFVGF-----LVG 105
           +S SL  S   +  +P+            IR R +S Q      F EKF  F     L+G
Sbjct: 7   ASSSLVSSFVAVKATPVTGPLIPRRDLLSIRIRASSNQNSSGYCFPEKFKSFAKSAILIG 66

Query: 106 SFIFM-GCFNVRYVRA-LPAQTSNKNPILAEKAQVPEEDSEEVM-WERILEHDPSNVDTL 165
           + + M G F+   V+A  P  T  K        +V EE   E+     +L+  P  V+TL
Sbjct: 67  AAVSMTGKFSTLPVKAESPVTTIEKT-----YEEVKEEKLSEITPLSELLDSTPEAVETL 126

Query: 166 KAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLALCYEILGELG---TAKRLFMEI 225
           +++L  K+  G+ E A+K ++RL+  +P+E EW+ L+A    +LGE+G    A+++F EI
Sbjct: 127 RSLLQQKLEKGEDEEALKLLERLVAAQPEETEWKFLMA---RLLGEMGRPENARQMFEEI 186

Query: 226 LKQKPLLVRALHGLALVMHKNNEGESVFEMLNKALDIARDEKKLTEHRSIGILIAQMHVV 285
           L++ PL   AL   AL+M ++ EG +V + L  AL +A  E  + E R + ++IAQ+H +
Sbjct: 187 LQRNPLSFEALFENALLMDRSGEGNAVLQRLEDALAVAEAEYLVKEARDVRLIIAQIHFL 246

Query: 286 KGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEAAEQFETYQALVPDEF 330
           +  ++E LK ++ L +E+P+DFRP+ C+G+IYSLLDK  EA EQF  Y+ L P +F
Sbjct: 247 QKNVDEALKSYEQLTKEDPKDFRPYFCRGMIYSLLDKNVEAKEQFAKYRELSPKKF 294

[Close]

BLAST of CSPI06G27110 vs. TAIR 10
Match: AT2G37400.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 151.4 bits (381), Expect = 1.4e-36
Identity = 84/219 (38.36%), Postives = 135/219 (61.64%), Query Frame = 0


Query: 136 DSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRILLAL 195
           + EE   E  L   P +V+ L++++  +++S K   A++ + RLI+LEP+E EW +L A 
Sbjct: 113 EEEERSLEEYLASHPDDVEALRSLMEVRIKSRKLLEAIELIDRLIELEPEEKEWPMLKAN 172

Query: 196 CYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEG-ESVFEMLNKALDIARDE 255
            +   G+L +AK  F EIL + PL V A HGL +    + +   +V + + +A+   + E
Sbjct: 173 IFSYSGDLESAKTGFEEILVKDPLRVEAYHGLVMAYSDSGDDLNAVEKRIEEAMVRCKKE 232

Query: 256 KKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKKKEA 315
           K   + R   +L+AQ+ V++G+  E LK ++ LV+E PRDFRP+LCQGIIY++L K+ EA
Sbjct: 233 KNRKDLRDFKLLVAQIRVIEGKHNEALKLYEELVKEEPRDFRPYLCQGIIYTVLKKENEA 292

Query: 316 AEQFETYQALVPDEFPQREFIDDVMLSATTASREQFQKE 354
            +QFE ++ LVP   P RE+  D M+ A+    E+ Q+E
Sbjct: 293 EKQFEKFRRLVPKNHPYREYFMDNMV-ASKLFAEKVQRE 330

[Close]

BLAST of CSPI06G27110 vs. TAIR 10
Match: AT5G02590.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 149.1 bits (375), Expect = 7.1e-36
Identity = 77/210 (36.67%), Postives = 134/210 (63.81%), Query Frame = 0


Query: 133 PEEDSEEVMWERILEHDPSNVDTLKAVLYGKMRSGKTENAVKYVKRLIDLEPDEVEWRIL 192
           P+E+ EE   E+ L  +P++V+ L++++  K ++   ++A++ + RLI+++P+E EWRIL
Sbjct: 109 PKEEEEEAALEKHLTKNPNDVEALQSLMKIKFQTKNIDHALEILNRLIEIQPEEQEWRIL 168

Query: 193 LALCYEILGELGTAKRLFMEILKQKPLLVRALHGLALVMHKNNEGESVFE-MLNKALDIA 252
            A      G+  +A + F E+L + P  V A HGL +   ++    S  E  +N+A++  
Sbjct: 169 KAQVQTYGGDFDSATKGFEEVLSKDPFRVEAYHGLVMAYSESESKLSEIESRINEAIEKC 228

Query: 253 RDEKKLTEHRSIGILIAQMHVVKGELEEGLKKFQNLVEENPRDFRPHLCQGIIYSLLDKK 312
           + E K  + R   +LIAQ+ V+KG   E L+ +Q LV++ P+DFRP+LCQG+IY+L+ KK
Sbjct: 229 KKENK-KDFRDFMLLIAQIRVIKGNPIEALRVYQELVKDEPKDFRPYLCQGLIYTLMKKK 288

Query: 313 KEAAEQFETYQALVPDEFPQREFIDDVMLS 342
            EA +QF  ++ LVP+  P +E++D  +L+
Sbjct: 289 DEAEKQFAEFRRLVPENHPYKEYLDANVLN 317

The following BLAST results are available for this feature:

BLAST of CSPI06G27110 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LS48	7.4e-38	35.81	protein SLOW GREEN 1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SG1 PE=1 ...	[more]

BLAST of CSPI06G27110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHZ0	5.4e-201	99.72	TPR_REGION domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G486920 ...	[more]
A0A5D3CPL4	2.0e-179	90.88	Protein SLOW GREEN 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255...	[more]
A0A1S3B0E6	2.0e-179	90.88	LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic OS=Cucumis melo OX=3656...	[more]
A0A6J1HF02	1.5e-139	74.86	protein SLOW GREEN 1, chloroplastic isoform X2 OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1BU39	1.7e-138	72.65	protein SLOW GREEN 1, chloroplastic OS=Momordica charantia OX=3673 GN=LOC1110053...	[more]

BLAST of CSPI06G27110 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004141968.1	1.1e-200	99.72	protein SLOW GREEN 1, chloroplastic [Cucumis sativus] >KGN48419.1 hypothetical p...	[more]
XP_008440127.1	4.1e-179	90.88	PREDICTED: LOW QUALITY PROTEIN: protein SLOW GREEN 1, chloroplastic [Cucumis mel...	[more]
XP_038880966.1	8.4e-164	83.43	protein SLOW GREEN 1, chloroplastic [Benincasa hispida]	[more]
KAG6595098.1	8.4e-140	75.14	protein SLOW GREEN 1, chloroplastic, partial [Cucurbita argyrosperma subsp. soro...	[more]
XP_022963051.1	3.2e-139	74.86	protein SLOW GREEN 1, chloroplastic isoform X2 [Cucurbita moschata]	[more]

BLAST of CSPI06G27110 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G39470.1	5.2e-79	52.63	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G53560.1	3.1e-39	40.00	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT3G18420.1	5.2e-39	35.81	Protein prenylyltransferase superfamily protein	[more]
AT2G37400.1	1.4e-36	38.36	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT5G02590.1	7.1e-36	36.67	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 263..339 e-value: 1.3E-5 score: 26.9
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 135..262 e-value: 6.0E-17 score: 63.7
IPR011990	Tetratricopeptide-like helical domain superfamily	SUPERFAMILY	48452	TPR-like	coord: 142..327
None	No IPR available	PFAM	PF13432	TPR_16	coord: 164..206 e-value: 0.0041 score: 17.8
None	No IPR available	PANTHER	PTHR26312:SF137	OS05G0182100 PROTEIN	coord: 1..354
None	No IPR available	PANTHER	PTHR26312	TETRATRICOPEPTIDE REPEAT PROTEIN 5	coord: 1..354

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G27110.1	CSPI06G27110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005515	protein binding