CSPI06G26800 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G26800
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1
Location	Chr6: 23594903 .. 23598192 (+)
RNA-Seq Expression	CSPI06G26800
Synteny	CSPI06G26800

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTAAGCATAAATAATGTAATGTTGTTGAGTATTTGTTTTGTTTTTATTAATAAGTTTTTTTTTTTAAATTGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAATTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTTTCATTCGTTCATTCATTCATTCATTCACACACACACACACACAACAGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGGTGGATTCTAAGCCTCCTCTTACTGATTTGTTCATTCATCAGGTTGTTTTTTTTTAAATTAAAAAAAAATTACTCAGTTAATTTAAAATTTTGTTTCTTTTTCATCTTAAAGAAATTATTTAAATGGGTATTTCAATTTTTTTTTGAAAAAATTAATGTGGGTGTGATTTAATTATTTGAAGATGTGTGTTTGGATGATGAGAAAATTTGAGGAAAATAAAAATAAAGAAATGTAGATGAATATATTATTGAAAATGTGTAGTGGGTTGTCTTTTTCCTTTCATTTGGTTTGTTTTTTTTCTTTTAAATTATTTTGTTGGACATTTCTGTAGAACAATTAGACACCAAATTTTACTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGGTAAAAGCTGATTAATCATTGACAATAATAGAAAAAGTTGAATTATAAATTTAGTTTTCTTTTTAATTGTGTGTTTATACTCAGTTAACTTTAAAATTAGGATCTGATTGGTTGGGCTTTCTTAGACCCAGAATTTAATTTTTTATACTTACGCTTGTTACTTTTAACAAGTTTGAACCATCTTTTACATACCTATTAATCATAAGTATAGATTTATAATTGTATCTTAAAATTATATGTAAAGAGATTATTTTATTTGTACATATGTTTGAAGAAGAGACTTGTTTATGAGAGATTTGATAGAAAAAGTAATTGAGTTATACCATGTCCATGTTTATCCAAACGTATATAATCTAATGAAGAGTAAACTAAATTATCATAAGTGTACAGCTTATAACTTTTATGGATACAATTTGAAAAATGAACACAAAGTAAAAAGAACCAAAAACAAAAACATAAAAACAAAAGTAAAATGGATTACCAAAAACAAACATAACTCAATACACCTACAATTTATAGTATCGACGTTTGAAGGTTAAGAGGTAAAAGTAAATTGTGAAGAAAAGGTTAAAAGAAAGGGGTGTGGAATGGGTTTGGAGTGTTATGAGCAGGAGCAGTGGCAGTAGATGGGGTTGTGGTGGAAGGGCAAAAAGAAAAAAGAAAAAAGAGAGAGAGAGAGAGATTCCATAATTTTGTTTTGTTTTCGATTGTTGCTTTCTATAATTTGGTTTCCTGGTTGTCACCTAATTAAATCAATGCTGGCCTCCTGTTTTTCTTTTTCATCAAACTCCTTTGTCTATTGGGATCTAAATTACATACAGAAAAGCTGCCTTTTACTTTTAGTACATAATTTTTTTTACTTAGTTTCATGGATTTGCTCCTTAGTATTGATGTTTATTATTAAATTTAAGTTAAATTCTAAATACTTTCATTCAATTTTCATCACTAGTAAATTATATTTTAATTTTTTATTCATAATTATTTTTTTTAAAAAAATTAACACCAAGGACAAAAGTGAGTTTGGACTCAGTAGCCCAATAGCCTTCACTGTTGTTTGGACTCAAGTTGGGCCAGCCCAACATATTCTCTTCCTCACTCTTTAAACTTTGGATAGTTGCAAATTTAACCAAAATGATATTTTAAATTCTGTCGATAGAAGTCTATCATCAATAGTAAATGATTACCCTAAAACTTTTGTTATAGATGAGATATAATTGTAAATATAGTCATTAAATTAAAAATAATTAAGTATATAACAATATTTTAAAAAAAATTATAAATACAACAAAATTTATTAAAGTTTATCATTAATAGACTATGTTGCAAATGTTTATTAATAGGCTATAAGAGTCTTTCAACGATAAAAGTCTATCACAAATAAATTTTGCTAAAATTTTAAATTTTAAAAAATATTGTTATATGGTTAATTATTATTATTATAATTACCCATTATAAATCGATTAATTTCGTTGTTTGGTTTGTTGCGTGGAATGTTGAACATCATGAATGAAGATTATATCAATTAAAATAATTTATATAATAAGTTTTTTTATTTATGTGAACTATGAAATTCAATCTAAGAACGATATTGAAACGTGTCTTTTAATCTCTATCTAATTTTAACAACTCGTTTCTAGATAAATTTTAAAATTCAAAAGTAAAAAATTTGTGAAAAGTTCACAAATCATTTACCAGTAGTTATCAAAACTAATATTTCAAACAAAAAAAATAAATACTCTATAAACATAAATAGTAAATAACTAAAAAAAACCATAAGGATTGTTGATTTTTAAAATGATTTTGAAGTTTGAAAAATGCTTTTAGATAGTGTGGAAGTTAATTTTACCATTAGTGATTCAATTGGCATAAACTTATATCCCAGAACTCATGGATGATAGAAATAGTAGTTATAGTATACAATGTCGTCTTTATTTTTATTTTTTTATTTTCACAAGATAATATACATTATAATTATTTGAATAATATTTGAATTTAAAAAGTTGGATGTCGTTAATGTGAATTCATGCAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGGCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAGCAATTGATCAATAAATTATTTTCGAAACGAAAATCCCTTCATTAGTTAATTACCAACTGAGGAACCATTATCCAAAAATTGTTTCATTTTCGTCTTCTTTTTTCCTTTTAGTTGTTATGACTTATGGGGAAAAATGCATACCTTCATCTTTACTTCTCTCTTAACTACTTTTTGTTCTTCTTTATGTTTCTGTCTCTGCTTTCATAGC

mRNA sequence

CTAAGCATAAATAATGTAATGTTGTTGAGTATTTGTTTTGTTTTTATTAATAAGTTTTTTTTTTTAAATTGCAATTTCGTTGTTTGTGACCAATTGTCCCAATCCCAAATTGCCGAAAATCCCTCTTTATAAATTATTAAACCCATCTTCTCTCTGTTTCTCACTTTCATTCGTTCATTCATTCATTCATTCACACACACACACACACAACAGCAACAGCAAAAGAAAAGATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGGCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAGCAATTGATCAATAAATTATTTTCGAAACGAAAATCCCTTCATTAGTTAATTACCAACTGAGGAACCATTATCCAAAAATTGTTTCATTTTCGTCTTCTTTTTTCCTTTTAGTTGTTATGACTTATGGGGAAAAATGCATACCTTCATCTTTACTTCTCTCTTAACTACTTTTTGTTCTTCTTTATGTTTCTGTCTCTGCTTTCATAGC

Coding sequence (CDS)

ATGGGAGCTTGTGCCACAAAGCCAAAGGATCTGAAGGCGGAGTCCGGCGACGCTCCGGAGGAGTTGCCGGCCGAAACTAAACCGGATCATGTCGGTGATGAAAAGGCGAAGGAGATCGTCGTTGATGATGACAAGAAGGAAGGTAATAAGGAGAAGACTGAAGATGCAGATCCACCGGAGAAGCAAGAGACCAACCCACCGGAAACTGAAAAGCAAATAAACCCACTACCGGAGGAGAAGCCGTCTGAAAACAACCCACCGGAGGCAGTAGTTTCGGACTCTGTTACAGAAAACAAAACTGTAACAGAAATGGAAACCCCAGATGAGGCAATCAAAGTGGAAGTTACCATTGAAAATGATGTTCCTCCGGAGAAGACAGAGTCAGCGGAGAAACCAACTGAAACAGAGAAGGAAGTGAAGGTAACTAATTAG

Protein sequence

MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN*

Homology

[Close]

BLAST of CSPI06G26800 vs. ExPASy TrEMBL
Match: A0A0A0KFS6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485140 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.3e-62
Identity = 142/158 (89.87%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPPSLTDLFIHQ 60

Query: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEME 120
           KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKTVTEME
Sbjct: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120

Query: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
           TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 158

[Close]

BLAST of CSPI06G26800 vs. ExPASy TrEMBL
Match: A0A1S3B2F3 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103485247 PE=4 SV=1)

HSP 1 Score: 217.2 bits (552), Expect = 4.4e-53
Identity = 128/158 (81.01%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPE
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTE----METPDE------- 120
           KQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN TV      METP+E       
Sbjct: 61  KQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDP 120

Query: 121 ----AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
                IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 KNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 158

[Close]

BLAST of CSPI06G26800 vs. ExPASy TrEMBL
Match: A0A5A7SHD6 (Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold255G00100 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.9e-50
Identity = 128/174 (73.56%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDD 60

Query: 61  -KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTE- 120
            KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN TV   
Sbjct: 61  QKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISS 120

Query: 121 ---METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
              METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 EKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 174

[Close]

BLAST of CSPI06G26800 vs. ExPASy TrEMBL
Match: A0A1S3B2G7 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485247 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 5.9e-50
Identity = 128/174 (73.56%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDD 60

Query: 61  -KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTE- 120
            KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN TV   
Sbjct: 61  QKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISS 120

Query: 121 ---METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
              METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 EKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 174

[Close]

BLAST of CSPI06G26800 vs. ExPASy TrEMBL
Match: A0A6J1GDB0 (pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucurbita moschata OX=3662 GN=LOC111452967 PE=4 SV=1)

HSP 1 Score: 94.0 bits (232), Expect = 5.6e-16
Identity = 89/181 (49.17%), Postives = 98/181 (54.14%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPA----------ETK-PDHVGDEKAKEIVVDDDKKE-- 60
           MGACATKPK LK +SGDAP   PA          ETK  D   D +  EI VD+DK +  
Sbjct: 1   MGACATKPKVLKPDSGDAPAPAPAPEPSPEKTVPETKLEDGTSDAQGTEI-VDEDKVDSK 60

Query: 61  --------GNKEKTEDADPPEKQ-------------------ETNPPETEKQINPLPEEK 120
                    ++EKT  ADP EK+                   ET PPETEK+INP  EEK
Sbjct: 61  PRCLSHLFNDQEKTAAADPSEKEEIPPESEKKMNPPPEEKPSETIPPETEKKINPPTEEK 120

Query: 121 PSENNP--PEAVVSDSVTENKTVTEMETPDEAIKVEVTIENDVPPEKTESAEKPTETEKE 140
           PSE NP  PE  VSDSVTEN    E       IKVEV  EN  PPEKTES EKPTETE+ 
Sbjct: 121 PSETNPPEPEPPVSDSVTENAGPIESN-----IKVEVPDENKPPPEKTESPEKPTETEEP 175

[Close]

BLAST of CSPI06G26800 vs. NCBI nr
Match: XP_004148639.1 (neurofilament medium polypeptide isoform X2 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.6e-65
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEMETPDEAIKVEVTIEND 120
           KQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKTVTEMETPDEAIKVEVTIEND
Sbjct: 61  KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIEND 120

Query: 121 VPPEKTESAEKPTETEKEVKVTN 144
           VPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 VPPEKTESAEKPTETEKEVKVTN 143

[Close]

BLAST of CSPI06G26800 vs. NCBI nr
Match: KAE8647470.1 (hypothetical protein Csa_004096 [Cucumis sativus])

HSP 1 Score: 258.1 bits (658), Expect = 4.6e-65
Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE
Sbjct: 166 MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 225

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEMETPDEAIKVEVTIEND 120
           KQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKTVTEMETPDEAIKVEVTIEND
Sbjct: 226 KQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEMETPDEAIKVEVTIEND 285

Query: 121 VPPEKTESAEKPTETEKEVKVTN 144
           VPPEKTESAEKPTETEKEVKVTN
Sbjct: 286 VPPEKTESAEKPTETEKEVKVTN 308

[Close]

BLAST of CSPI06G26800 vs. NCBI nr
Match: XP_031744063.1 (pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis sativus])

HSP 1 Score: 248.1 bits (632), Expect = 4.8e-62
Identity = 142/158 (89.87%), Postives = 142/158 (89.87%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPPSLTDLFIHQ 60

Query: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTEME 120
           KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPE VVSDSVTENKTVTEME
Sbjct: 61  KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEPVVSDSVTENKTVTEME 120

Query: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
           TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN
Sbjct: 121 TPDEAIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 158

[Close]

BLAST of CSPI06G26800 vs. NCBI nr
Match: XP_008441003.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 [Cucumis melo])

HSP 1 Score: 217.2 bits (552), Expect = 9.0e-53
Identity = 128/158 (81.01%), Postives = 133/158 (84.18%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEDADPPE 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTE ADPPE
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKKEGNKEKTEGADPPE 60

Query: 61  KQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTE----METPDE------- 120
           KQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN TV      METP+E       
Sbjct: 61  KQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISSEKLMETPNEENKEIDP 120

Query: 121 ----AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
                IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 KNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 158

[Close]

BLAST of CSPI06G26800 vs. NCBI nr
Match: XP_008441002.1 (PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo] >KAA0025560.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo var. makuwa] >TYK12435.1 pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.2e-49
Identity = 128/174 (73.56%), Postives = 133/174 (76.44%), Query Frame = 0


Query: 1   MGACATKPKDLKAESGDAPEELPAETKPDHVGDEKAKEIVVDDDK--------------- 60
           MGACATKPK +KAESG+APEELPAETKPDHVGDEKAKEIVVDDDK               
Sbjct: 1   MGACATKPKGMKAESGEAPEELPAETKPDHVGDEKAKEIVVDDDKVDSKPRSLSNLFIDD 60

Query: 61  -KEGNKEKTEDADPPEKQETNPPETEKQINPLPEEKPSENNPPEAVVSDSVTENKTVTE- 120
            KEGNKEKTE ADPPEKQETNPPETEKQI+PLPEEKPSENNPPE  VSDSVTEN TV   
Sbjct: 61  QKEGNKEKTEGADPPEKQETNPPETEKQIDPLPEEKPSENNPPEPAVSDSVTENNTVISS 120

Query: 121 ---METPDE-----------AIKVEVTIENDVPPEKTESAEKPTETEKEVKVTN 144
              METP+E            IKVEVT ENDVPPEKTES+EKPTETEKEVKV N
Sbjct: 121 EKLMETPNEENKEIDPKNEDKIKVEVTTENDVPPEKTESSEKPTETEKEVKVIN 174

The following BLAST results are available for this feature:

BLAST of CSPI06G26800 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G26800 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFS6	2.3e-62	89.87	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G485140 PE=4 SV=1	[more]
A0A1S3B2F3	4.4e-53	81.01	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X2 OS=Cucumi...	[more]
A0A5A7SHD6	5.9e-50	73.56	Pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucumi...	[more]
A0A1S3B2G7	5.9e-50	73.56	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 OS=Cucumi...	[more]
A0A6J1GDB0	5.6e-16	49.17	pollen-specific leucine-rich repeat extensin-like protein 1 OS=Cucurbita moschat...	[more]

BLAST of CSPI06G26800 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148639.1	4.6e-65	99.30	neurofilament medium polypeptide isoform X2 [Cucumis sativus]	[more]
KAE8647470.1	4.6e-65	99.30	hypothetical protein Csa_004096 [Cucumis sativus]	[more]
XP_031744063.1	4.8e-62	89.87	pollen-specific leucine-rich repeat extensin-like protein 1 isoform X1 [Cucumis ...	[more]
XP_008441003.1	9.0e-53	81.01	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X...	[more]
XP_008441002.1	1.2e-49	73.56	PREDICTED: pollen-specific leucine-rich repeat extensin-like protein 1 isoform X...	[more]

BLAST of CSPI06G26800 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 102..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 10..77
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 87..101

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G26800.1	CSPI06G26800.1	mRNA