CSPI06G25910 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G25910
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	cysteine proteinase inhibitor A-like
Location	Chr6: 22956087 .. 22956510 (+)
RNA-Seq Expression	CSPI06G25910
Synteny	CSPI06G25910

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CACGAACAAAACACATAAACTTTACTACATAATATATCATCTTCTAAAACTATCTGTCCATCAAAAGTAGATTGTTGCAGTATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAACGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAATGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCCGAATAGTATGAAAACAATCCTTCTATATGTGTGTGTG

mRNA sequence

CACGAACAAAACACATAAACTTTACTACATAATATATCATCTTCTAAAACTATCTGTCCATCAAAAGTAGATTGTTGCAGTATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAACGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAATGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCCGAATAGTATGAAAACAATCCTTCTATATGTGTGTGTG

Coding sequence (CDS)

ATGAGTTTCGTAATTAAGGGATCACCCATTCCAAACATCGATCAGCGAAACGACGTGCAACAAATTGGAGGGATTGCAGTGGACATACACAACGAAGAAAAATCAGACACTTTGATTTTCCATCGTGTGATAAATGGCCTGGAGCTTGTGATTAATGATATAAATGGTAGCATATTGTCGTATACTCTTGTGGTGGAAGCTATAAATAAGGATAAAAATATCTGGACATATGTGACTTCCATTAAAATTACAAAACCATCAAGCTATGAACTCGTATATTTTAGAGATCCCCTCGGGTACTACCCCGAATAG

Protein sequence

MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILSYTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYPE*

Homology

[Close]

BLAST of CSPI06G25910 vs. ExPASy TrEMBL
Match: A0A0A0LVH4 (Cystatin Hv-CPI6 OS=Cucumis sativus OX=3659 GN=Csa_1G123470 PE=4 SV=1)

HSP 1 Score: 61.2 bits (147), Expect = 2.9e-06
Identity = 37/105 (35.24%), Postives = 61/105 (58.10%), Query Frame = 0


Query: 6   KGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILSYTLVV 65
           +  PI +++  ++V+   G AV IHN++K DTL+F RV+NGL+  ++    +   Y+L++
Sbjct: 3   RAEPIKDVND-SEVKFAAGQAVKIHNDQKHDTLVFIRVVNGLKQEVD----TAKLYSLLI 62

Query: 66  EAINKDKNIWTYVTSIKI--TKPSSY-------ELVYFRDPLGYY 102
           EA N D   W Y+  IK+    PS Y       EL+ + DPL ++
Sbjct: 63  EATNGDGTHWGYIAKIKLWPKAPSHYDPYSHTFELISWEDPLKFW 102

[Close]

BLAST of CSPI06G25910 vs. ExPASy TrEMBL
Match: A0A5A7SX36 (Cystatin Hv-CPI6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G00250 PE=4 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-05
Identity = 36/102 (35.29%), Postives = 58/102 (56.86%), Query Frame = 0


Query: 9   PIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILSYTLVVEAI 68
           PI +++  ++V+   G AV IHN++K D L+F RV+NG++  ++   G    Y+L++EA 
Sbjct: 6   PIKDVND-SEVKFAAGEAVKIHNDKKDDDLVFIRVVNGVKQQVD--YGK--QYSLLIEAR 65

Query: 69  NKDKNIWTYVTSIKITK---------PSSYELVYFRDPLGYY 102
           N D   W Y   IK+ +         P SY L+ + DPL +Y
Sbjct: 66  NGDGTHWGYCAKIKLLRKPVSHHDPYPHSYVLISWEDPLKFY 102

[Close]

BLAST of CSPI06G25910 vs. ExPASy TrEMBL
Match: A0A5A7TJK0 (Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold83G001140 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-04
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 1  MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSI-- 60
          MS +    PI +I+   +VQ +G + VD HN++  + L F RV+NGL    +D    +  
Sbjct: 1  MSIMSAFKPIEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLAASFSDPISPLGG 60

Query: 61 LSYTLVVEAINKDKNIWTYVTSIKITK 86
          + Y LV+EAI   K  WTY   +  +K
Sbjct: 61 VLYELVLEAITTSKINWTYKARVSKSK 87

[Close]

BLAST of CSPI06G25910 vs. ExPASy TrEMBL
Match: A0A1S3B5B9 (cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=4 SV=1)

HSP 1 Score: 53.5 bits (127), Expect = 6.0e-04
Identity = 31/87 (35.63%), Postives = 47/87 (54.02%), Query Frame = 0


Query: 1  MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSI-- 60
          MS +    PI +I+   +VQ +G + VD HN++  + L F RV+NGL    +D    +  
Sbjct: 1  MSIMSAFKPIEDINDNLEVQDLGNLTVDDHNKKTGENLKFVRVVNGLAASFSDPISPLGG 60

Query: 61 LSYTLVVEAINKDKNIWTYVTSIKITK 86
          + Y LV+EAI   K  WTY   +  +K
Sbjct: 61 VLYELVLEAITTSKINWTYKARVSKSK 87

[Close]

BLAST of CSPI06G25910 vs. NCBI nr
Match: KAE8645934.1 (hypothetical protein Csa_021370 [Cucumis sativus])

HSP 1 Score: 206.8 bits (525), Expect = 8.8e-50
Identity = 102/103 (99.03%), Postives = 102/103 (99.03%), Query Frame = 0


Query: 1   MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60
           MSFVIKGSPIPNIDQR DVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS
Sbjct: 1   MSFVIKGSPIPNIDQRKDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60

Query: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYPE 104
           YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYPE
Sbjct: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYPE 103

[Close]

BLAST of CSPI06G25910 vs. NCBI nr
Match: KAE8647444.1 (hypothetical protein Csa_003412 [Cucumis sativus])

HSP 1 Score: 204.5 bits (519), Expect = 4.4e-49
Identity = 101/102 (99.02%), Postives = 101/102 (99.02%), Query Frame = 0


Query: 1   MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60
           MSFVIKGSPIPNIDQR DVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS
Sbjct: 1   MSFVIKGSPIPNIDQRKDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60

Query: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYP 103
           YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYP
Sbjct: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYP 102

[Close]

BLAST of CSPI06G25910 vs. NCBI nr
Match: KAE8645932.1 (hypothetical protein Csa_021380 [Cucumis sativus])

HSP 1 Score: 164.9 bits (416), Expect = 3.8e-37
Identity = 85/102 (83.33%), Postives = 90/102 (88.24%), Query Frame = 0


Query: 1   MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDING-SIL 60
           MSF  KG PIPNIDQR DVQQIG IAVDIHNE+K DTLIFHRVINGLE+ I+DI+G  IL
Sbjct: 1   MSFKNKGPPIPNIDQRKDVQQIGRIAVDIHNEQKPDTLIFHRVINGLEIGISDIHGPRIL 60

Query: 61  SYTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYY 102
            YTLVVEAINKDK IWTYVTSIKITKPSSYELV F+DPLGYY
Sbjct: 61  LYTLVVEAINKDKIIWTYVTSIKITKPSSYELVSFKDPLGYY 102

[Close]

BLAST of CSPI06G25910 vs. NCBI nr
Match: KAE8645933.1 (hypothetical protein Csa_021387 [Cucumis sativus])

HSP 1 Score: 145.2 bits (365), Expect = 3.1e-31
Identity = 77/102 (75.49%), Postives = 82/102 (80.39%), Query Frame = 0


Query: 1   MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60
           MS VIKGSPIPNIDQR DVQQIG IAVDIHNE+KSDTLIFHRVINGLE  ++    +  S
Sbjct: 1   MSLVIKGSPIPNIDQRKDVQQIGRIAVDIHNEDKSDTLIFHRVINGLENAVD----TCKS 60

Query: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYYP 103
           Y LVVE I KDK IWTY T I I + SSYELVYFRDPLGYYP
Sbjct: 61  YALVVEVI-KDKIIWTYATLITIPQTSSYELVYFRDPLGYYP 97

[Close]

BLAST of CSPI06G25910 vs. NCBI nr
Match: KAE8645931.1 (hypothetical protein Csa_021386 [Cucumis sativus])

HSP 1 Score: 107.1 bits (266), Expect = 9.5e-20
Identity = 60/101 (59.41%), Postives = 68/101 (67.33%), Query Frame = 0


Query: 1   MSFVIKGSPIPNIDQRNDVQQIGGIAVDIHNEEKSDTLIFHRVINGLELVINDINGSILS 60
           MS   KGSPI  IDQR DVQQIG  A  IHN+EK DTL F RV  GLE    D+N +  S
Sbjct: 1   MSSENKGSPIFVIDQREDVQQIGQNATHIHNQEKPDTLGFLRVTYGLE----DVNATCKS 60

Query: 61  YTLVVEAINKDKNIWTYVTSIKITKPSSYELVYFRDPLGYY 102
           YTL VEA+NKDK IWTY+ SIK+T+P       F+DP GYY
Sbjct: 61  YTLGVEALNKDKIIWTYMASIKMTEPHDKYEQSFKDPFGYY 97

The following BLAST results are available for this feature:

BLAST of CSPI06G25910 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G25910 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0LVH4	2.9e-06	35.24	Cystatin Hv-CPI6 OS=Cucumis sativus OX=3659 GN=Csa_1G123470 PE=4 SV=1	[more]
A0A5A7SX36	1.9e-05	35.29	Cystatin Hv-CPI6 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold836G002...	[more]
A0A5A7TJK0	6.0e-04	35.63	Cysteine proteinase inhibitor A-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3B5B9	6.0e-04	35.63	cysteine proteinase inhibitor A-like OS=Cucumis melo OX=3656 GN=LOC103486185 PE=...	[more]

BLAST of CSPI06G25910 vs. NCBI nr


Match Name	E-value	Identity	Description
KAE8645934.1	8.8e-50	99.03	hypothetical protein Csa_021370 [Cucumis sativus]	[more]
KAE8647444.1	4.4e-49	99.02	hypothetical protein Csa_003412 [Cucumis sativus]	[more]
KAE8645932.1	3.8e-37	83.33	hypothetical protein Csa_021380 [Cucumis sativus]	[more]
KAE8645933.1	3.1e-31	75.49	hypothetical protein Csa_021387 [Cucumis sativus]	[more]
KAE8645931.1	9.5e-20	59.41	hypothetical protein Csa_021386 [Cucumis sativus]	[more]

BLAST of CSPI06G25910 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.10.450.10		coord: 6..97 e-value: 1.0E-8 score: 37.0
None	No IPR available	SUPERFAMILY	54403	Cystatin/monellin	coord: 12..80

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G25910.1	CSPI06G25910.1	mRNA