CSPI06G25780 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G25780
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	COPII coat assembly protein SEC16, putative
Location	Chr6: 22873768 .. 22874244 (-)
RNA-Seq Expression	CSPI06G25780
Synteny	CSPI06G25780

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

mRNA sequence

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

Coding sequence (CDS)

ATGGCCAAATCCTCCGCCCAATTAACCTATCCACCGCCGTCCCCATCACTCCGCCGCACAACCTTTCTTCCCTCCTCCCCCATGCCTCCGCCAAACCCAGCCGTTTCCCCTCCACCACCGCCATCTCCCATTAACTTAGCTCTCCTCTCCTTCAAATCCTCTTCTCAATCCTACACTTCTCTCAAGGACATCCTTCCCTCTGCCTCTGCCTCTGCTGCCGCCGTCAACTCTCCCACCGCAGCTTCCCCCGCTAACTCCCCCTACGAAATCTCCATCCGCAATCGCCTCGTTAAGCAGGCCGCTTGGGCTTATCTCCAGCCTATGTCCGCTTCTTCCTATTCCGCCGGCCCCAATTTCTTCCATCGTTTCTGCCTCCGTTTCTCTACTGGAAATCCGATCTACAGTTGTTTTGGATTCATCAGAAGCAGTATTGTTCCGGCTATAATCCGTGCTTTTCGGTTCTGCATTTGCTTTTGA

Protein sequence

MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF*

Homology

[Close]

BLAST of CSPI06G25780 vs. ExPASy TrEMBL
Match: A0A0A0KHJ9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1)

HSP 1 Score: 299.7 bits (766), Expect = 7.4e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 159
           HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Sbjct: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 158

[Close]

BLAST of CSPI06G25780 vs. ExPASy TrEMBL
Match: A0A5A7SL81 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold541G00720 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CSPI06G25780 vs. ExPASy TrEMBL
Match: A0A1S3CHC6 (uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.7e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CSPI06G25780 vs. ExPASy TrEMBL
Match: A0A5D3C6C7 (Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold202G001710 PE=4 SV=1)

HSP 1 Score: 279.3 bits (713), Expect = 1.0e-71
Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CSPI06G25780 vs. ExPASy TrEMBL
Match: A0A6J1IS66 (uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.0e-52
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60

Query: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 158

[Close]

BLAST of CSPI06G25780 vs. NCBI nr
Match: XP_011657724.1 (early nodulin-20 [Cucumis sativus] >KGN48294.1 hypothetical protein Csa_003692 [Cucumis sativus])

HSP 1 Score: 299.7 bits (766), Expect = 1.5e-77
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 159
           HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF
Sbjct: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCICF 158

[Close]

BLAST of CSPI06G25780 vs. NCBI nr
Match: XP_008462609.1 (PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 281.2 bits (718), Expect = 5.6e-72
Identity = 150/157 (95.54%), Postives = 152/157 (96.82%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRTTFLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTTFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CSPI06G25780 vs. NCBI nr
Match: TYK07441.1 (putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa])

HSP 1 Score: 279.3 bits (713), Expect = 2.1e-71
Identity = 149/157 (94.90%), Postives = 151/157 (96.18%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPSLRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSSQSYTS 60
           MAKS+AQLTYPPPSPSLRRT FLPSSPMPPPN  VSPPPPPSPINLALLSFKSSSQSYTS
Sbjct: 1   MAKSAAQLTYPPPSPSLRRTAFLPSSPMPPPNADVSPPPPPSPINLALLSFKSSSQSYTS 60

Query: 61  LKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120
           LKDILP  SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF
Sbjct: 61  LKDILP--SASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSAGPNFF 120

Query: 121 HRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           HRFCLRFSTGNPIYSCFGFI SSI+PAIIRAFRFCIC
Sbjct: 121 HRFCLRFSTGNPIYSCFGFITSSIIPAIIRAFRFCIC 155

[Close]

BLAST of CSPI06G25780 vs. NCBI nr
Match: XP_038883302.1 (uncharacterized protein LOC120074291 [Benincasa hispida])

HSP 1 Score: 244.2 bits (622), Expect = 7.6e-61
Identity = 136/163 (83.44%), Postives = 141/163 (86.50%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS---LRRTTFLPSSPMPPPN---PAVSPPPPPSPINLALLSFKSS 60
           MAKS+AQ+TYPPPSPS   LR   F+PSSPMPPPN     VSPPPPPSPINL LLSFKSS
Sbjct: 1   MAKSAAQITYPPPSPSLSNLRHRAFIPSSPMPPPNGTVSGVSPPPPPSPINLRLLSFKSS 60

Query: 61  SQSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYS 120
           SQSYTSLKDILPSAS   AAVNSPTAASPANS YEISIRNRLVKQAAWAYLQPMSASSYS
Sbjct: 61  SQSYTSLKDILPSAS---AAVNSPTAASPANSGYEISIRNRLVKQAAWAYLQPMSASSYS 120

Query: 121 AGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           AGPNFFHRF LRFST NPIY C GFIR +I+PAIIR FRFCIC
Sbjct: 121 AGPNFFHRFWLRFSTANPIYGCLGFIRGTIIPAIIRVFRFCIC 160

[Close]

BLAST of CSPI06G25780 vs. NCBI nr
Match: XP_022979075.1 (uncharacterized protein LOC111478820 [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.4e-51
Identity = 125/162 (77.16%), Postives = 132/162 (81.48%), Query Frame = 0


Query: 1   MAKSSAQLTYPPPSPS-----LRRTTFLPSSPMPPPNPAVSPPPPPSPINLALLSFKSSS 60
           MAKS+AQ TYPPPSPS     L R + +PSS MPP N  +SP PPPSPI+L LLS KSSS
Sbjct: 1   MAKSAAQKTYPPPSPSPSPANLCRRSLIPSSAMPPQNGTLSPAPPPSPIDLRLLS-KSSS 60

Query: 61  QSYTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQPMSASSYSA 120
           QSYTSLKDILPS   SA AVNSPTAASPANS YEI IRNRLVKQAAWAYLQPMSASSYSA
Sbjct: 61  QSYTSLKDILPS---SAVAVNSPTAASPANSGYEILIRNRLVKQAAWAYLQPMSASSYSA 120

Query: 121 GPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAFRFCIC 158
           GPN FHRF LRFSTGNPI SC GFIR  I+P+IIR FR CIC
Sbjct: 121 GPNLFHRFWLRFSTGNPISSCLGFIRGCIIPSIIRVFRSCIC 158

[Close]

BLAST of CSPI06G25780 vs. TAIR 10
Match: AT5G06280.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.0e-08
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 13  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS-- 72
           P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S  
Sbjct: 9   PATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDIISSPI 68

Query: 73  -ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQP--MSASSYSAGPNFFHRFC 132
            +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQP  +++S  SAG  FF R  
Sbjct: 69  NSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFFRRVW 128

Query: 133 LRFSTGNPIYSCFGFIRSSIVPAIIRAFR 154
           L  S G      F F+R  +   I ++FR
Sbjct: 129 LHLSAG------FQFLR-RVFDWIFQSFR 150

[Close]

BLAST of CSPI06G25780 vs. TAIR 10
Match: AT5G06280.3 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G52520.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 8.0e-08
Identity = 57/149 (38.26%), Postives = 82/149 (55.03%), Query Frame = 0


Query: 13  PSPSLRRTTFLP--SSPMPPPNPAVSPPPPPSPINLALLSFKSSS-QSYTSLKDILPS-- 72
           P+  LRRT  +   ++  PP  P      PPS  +  L+S K SS  +YTSL+DI+ S  
Sbjct: 9   PATQLRRTKSISNMTTLTPPEVPFDIASTPPSSFDYELISVKPSSFVAYTSLRDIISSPI 68

Query: 73  -ASASAAAVNSPTAASPANSPYEISIRNRLVKQAAWAYLQP--MSASSYSAGPNFFHRFC 132
            +S +  ++N   +   + +  +ISIRNRLVKQAA +YLQP  +++S  SAG  FF R  
Sbjct: 69  NSSLNLPSINGSCSPVISTAAGDISIRNRLVKQAALSYLQPTVLTSSDDSAGSQFFRRVW 128

Query: 133 LRFSTGNPIYSCFGFIRSSIVPAIIRAFR 154
           L  S G      F F+R  +   I ++FR
Sbjct: 129 LHLSAG------FQFLR-RVFDWIFQSFR 150

[Close]

BLAST of CSPI06G25780 vs. TAIR 10
Match: AT3G52520.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G06280.3); Has 24 Blast hits to 24 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 53.9 bits (128), Expect = 1.4e-07
Identity = 45/113 (39.82%), Postives = 63/113 (55.75%), Query Frame = 0


Query: 44  INLALLSFKSSSQS----YTSLKDILPSASASAAAVNSPTAASPANSPYEISIRNRLVKQ 103
           ++L L+S   SS+     YTSLKDILPS+S +  +     A + A S   I+IRNRLVKQ
Sbjct: 23  LDLELVSVNKSSEDPLPCYTSLKDILPSSSTTVDSPAISFAVASAVSGPTITIRNRLVKQ 82

Query: 104 AAWAYLQPMSASSYSAGPNFFHRFCLRFSTGNPIYSCFGFIRSSIVPAIIRAF 153
           AA +YLQP S  + S+ P+F  R          + S F  + S+   A++R F
Sbjct: 83  AACSYLQP-STPTPSSNPSFLRR----------VSSSFIRLVSAFFDALLRIF 124

The following BLAST results are available for this feature:

BLAST of CSPI06G25780 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G25780 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KHJ9	7.4e-78	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G454420 PE=4 SV=1	[more]
A0A5A7SL81	2.7e-72	95.54	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A1S3CHC6	2.7e-72	95.54	uncharacterized protein LOC103500927 OS=Cucumis melo OX=3656 GN=LOC103500927 PE=...	[more]
A0A5D3C6C7	1.0e-71	94.90	Putative COPII coat assembly protein SEC16 OS=Cucumis melo var. makuwa OX=119469...	[more]
A0A6J1IS66	7.0e-52	77.16	uncharacterized protein LOC111478820 OS=Cucurbita maxima OX=3661 GN=LOC111478820...	[more]

BLAST of CSPI06G25780 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657724.1	1.5e-77	100.00	early nodulin-20 [Cucumis sativus] >KGN48294.1 hypothetical protein Csa_003692 [...	[more]
XP_008462609.1	5.6e-72	95.54	PREDICTED: uncharacterized protein LOC103500927 [Cucumis melo] >KAA0025225.1 put...	[more]
TYK07441.1	2.1e-71	94.90	putative COPII coat assembly protein SEC16 [Cucumis melo var. makuwa]	[more]
XP_038883302.1	7.6e-61	83.44	uncharacterized protein LOC120074291 [Benincasa hispida]	[more]
XP_022979075.1	1.4e-51	77.16	uncharacterized protein LOC111478820 [Cucurbita maxima]	[more]

BLAST of CSPI06G25780 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G06280.1	8.0e-08	38.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G06280.3	8.0e-08	38.26	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G52520.1	1.4e-07	39.82	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..23
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 24..41
None	No IPR available	PANTHER	PTHR34569:SF2	EXPRESSED PROTEIN	coord: 10..154
None	No IPR available	PANTHER	PTHR34569	EXPRESSED PROTEIN	coord: 10..154

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G25780.1	CSPI06G25780.1	mRNA