CSPI06G25290 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G25290
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 22538692 .. 22539072 (+)
RNA-Seq ExpressionCSPI06G25290
SyntenyCSPI06G25290
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGGTTTTAAGCTCACCAGTCTTGTTGTAAGGAGGGCATGCGTGGCTTATCGAGTTGGAGCATGTGACTTTAATAGCGTTTGTAATATTATATCTATTTTCACTTAATTCAAGCTCCTCTTGTGATTTTATGATCTTATTTTGATTATTGTGCTCTATGTTTTGAGCAATTCGAAGGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCATCAATTGCCCTACGACGCTATGCGTGGTGTTGTAAGATAGAAGGGATTATTATTCACGAAAATGATGTGGCACCATCTCAGAGTGTCACGGTACTC

mRNA sequence

ATGGGTTTTAAGCTCACCAGTCTTGTTGTAAGGAGGGCATGCGTGGCTTATCGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCATCAATTGCCCTACGACGCTATGCGTGGTGTTGTAAGATAGAAGGGATTATTATTCACGAAAATGATGTGGCACCATCTCAGAGTGTCACGGTACTC

Coding sequence (CDS)

ATGGGTTTTAAGCTCACCAGTCTTGTTGTAAGGAGGGCATGCGTGGCTTATCGAGTTGGAGCATGTGACTTTAATAGCGTAGAATGTGGTGATGATGTCGATTTGGAGCTAATTCGAGCAAAACGATGTCAACCGAAGCAAATGAGTAATGAAATGAAGCCAATTAGGCTTTTGTCTCGTAGCGCATCAATTGCCCTACGACGCTATGCGTGGTGTTGTAAGATAGAAGGGATTATTATTCACGAAAATGATGTGGCACCATCTCAGAGTGTCACGGTACTC

Protein sequence

MGFKLTSLVVRRACVAYRVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSRSASIALRRYAWCCKIEGIIIHENDVAPSQSVTVL
Homology
[Close]
BLAST of CSPI06G25290 vs. ExPASy TrEMBL
Match: A0A0A0KKF0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G450950 PE=4 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MGFKLTSLVVRRACVAYRVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRAC+AY VGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SASIALRRYAWCCKIEGIIIHENDVAPSQSVTVL 95
          SA I LRRYAWCCKIE IIIHENDVAPS SVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

[Close]
BLAST of CSPI06G25290 vs. NCBI nr
Match: KGN48241.1 (hypothetical protein Csa_003826 [Cucumis sativus])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 88/94 (93.62%), Postives = 89/94 (94.68%), Query Frame = 0 

Query: 1  MGFKLTSLVVRRACVAYRVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60
          MGFKLTSLVVRRAC+AY VGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR
Sbjct: 1  MGFKLTSLVVRRACMAYGVGACDFNSVECGDDVDLELIRAKRCQPKQMSNEMKPIRLLSR 60

Query: 61 SASIALRRYAWCCKIEGIIIHENDVAPSQSVTVL 95
          SA I LRRYAWCCKIE IIIHENDVAPS SVTVL
Sbjct: 61 SAVIVLRRYAWCCKIEEIIIHENDVAPSPSVTVL 94

The following BLAST results are available for this feature:
BLAST of CSPI06G25290 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G25290 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KKF02.3e-4293.62Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G450950 PE=4 SV=1[more]
BLAST of CSPI06G25290 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN48241.14.7e-4293.62hypothetical protein Csa_003826 [Cucumis sativus][more]
BLAST of CSPI06G25290 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G25290.1CSPI06G25290.1mRNA