CSPI06G24320 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G24320
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	aquaporin PIP2-2-like
Location	Chr6: 21779608 .. 21779928 (-)
RNA-Seq Expression	CSPI06G24320
Synteny	CSPI06G24320

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCTCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

mRNA sequence

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCTCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Coding sequence (CDS)

ATGTCTAAGGATCTTGACCCTGCTTTTCCCACCGGCGACTACTTCGATCATCCTCCCGCTCCCTTCTTCGACCCTGAAGAGCTCTTGCGGTGGTCCTTTTACAGAGCTGTTATTGCCGAGTTCATTGCTACTCTTTTGTTTTTGTATGTTGGAGTTCTCACTGTGATTGGAAGTCAGAGTCAGGATTCTGCCGCTGTATGCGGCGGCGTTGGTGTTCAGGGCATTGCTTGGGCGTTCGGCGGCACCATCTTTGTTCTCGTTTACTGCACCGCCGGCATTTCTGGCAAGCTCTTCTACTCTTTCTTTCTCCCTCGTGTATGA

Protein sequence

MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV*

Homology

[Close]

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot
Match: P30302 (Aquaporin PIP2-3 OS=Arabidopsis thaliana OX=3702 GN=PIP2-3 PE=1 SV=1)

HSP 1 Score: 126.7 bits (317), Expect = 1.6e-28
Identity = 67/101 (66.34%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot
Match: Q9FF53 (Probable aquaporin PIP2-4 OS=Arabidopsis thaliana OX=3702 GN=PIP2-4 PE=1 SV=1)

HSP 1 Score: 126.3 bits (316), Expect = 2.0e-28
Identity = 70/105 (66.67%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot
Match: P43287 (Aquaporin PIP2-2 OS=Arabidopsis thaliana OX=3702 GN=PIP2-2 PE=1 SV=2)

HSP 1 Score: 125.2 bits (313), Expect = 4.5e-28
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot
Match: P43286 (Aquaporin PIP2-1 OS=Arabidopsis thaliana OX=3702 GN=PIP2-1 PE=1 SV=1)

HSP 1 Score: 124.4 bits (311), Expect = 7.7e-28
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MSKDLD----PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot
Match: Q6K215 (Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP2-2 PE=2 SV=1)

HSP 1 Score: 122.5 bits (306), Expect = 2.9e-27
Identity = 66/107 (61.68%), Postives = 75/107 (70.09%), Query Frame = 0


Query: 1   MSKDLDPAFPTG------DYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KD++ + P G      DY D PPAP  D EEL +WS YRAVIAEFIATLLFLY+ V T
Sbjct: 1   MAKDIEASAPEGGEFSAKDYTDPPPAPLIDVEELTKWSLYRAVIAEFIATLLFLYITVAT 60

Query: 61  VIGSQSQDSA------AVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG + Q  A      A C GVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  VIGYKHQSDATVNTTDAACSGVGILGIAWAFGGMIFILVYCTAGISG 107

[Close]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL
Match: A0A0A0KEN2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445100 PE=3 SV=1)

HSP 1 Score: 215.7 bits (548), Expect = 9.4e-53
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0


Query: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
           MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1   MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 107
           QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV
Sbjct: 61  QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISGKLFYSFFLPRV 106

[Close]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL
Match: A0A1S3BM90 (aquaporin PIP2-2-like OS=Cucumis melo OX=3656 GN=LOC103491191 PE=3 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.5e-45
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDP FPTGDYFDHPPAPFFD EELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPGFPTGDYFDHPPAPFFDSEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL
Match: A0A6J1ECM6 (aquaporin PIP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111432986 PE=3 SV=1)

HSP 1 Score: 151.8 bits (382), Expect = 1.7e-33
Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1  MSKDLDP----AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          MSKD++      F  GDY D PPAPFFD  EL RWSFYRA+IAEFIATLLFLYVGVLTVI
Sbjct: 1  MSKDVEAGIRGGFSAGDYLDQPPAPFFDTNELSRWSFYRAIIAEFIATLLFLYVGVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G+Q Q SA+ CGGVGV GIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 GNQRQSSASACGGVGVLGIAWAFGGTIFVLVYCTAGISG 99

[Close]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL
Match: A0A5A7TZ79 (Aquaporin PIP2-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold908G00590 PE=3 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 5.4e-32
Identity = 72/74 (97.30%), Postives = 72/74 (97.30%), Query Frame = 0


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDP FPTGDYFDHPPAPFFD EELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPGFPTGDYFDHPPAPFFDSEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQG 75
          QDSAAVCGGVGVQG
Sbjct: 61 QDSAAVCGGVGVQG 74

[Close]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL
Match: A0A6J1CQ42 (aquaporin PIP2-1-like OS=Momordica charantia OX=3673 GN=LOC111013544 PE=3 SV=1)

HSP 1 Score: 145.6 bits (366), Expect = 1.2e-31
Identity = 75/98 (76.53%), Postives = 80/98 (81.63%), Query Frame = 0


Query: 1  MSKDLDP---AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG 60
          MSKD++     F  GDY D PPAP FD  EL RWSFYRAVIAEF+ATLLFLYVGVLTVIG
Sbjct: 1  MSKDVEAGAGGFAAGDYLDQPPAPLFDAGELGRWSFYRAVIAEFVATLLFLYVGVLTVIG 60

Query: 61 SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           ++Q SAA CGG GV GIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 DKTQASAAACGGFGVLGIAWAFGGTIFVLVYCTAGISG 98

[Close]

BLAST of CSPI06G24320 vs. NCBI nr
Match: XP_004143247.2 (aquaporin PIP2-2 [Cucumis sativus] >KAE8647390.1 hypothetical protein Csa_002861 [Cucumis sativus])

HSP 1 Score: 193.7 bits (491), Expect = 7.9e-46
Identity = 95/95 (100.00%), Postives = 95/95 (100.00%), Query Frame = 0


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of CSPI06G24320 vs. NCBI nr
Match: NP_001380715.1 (aquaporin PIP2-9 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 2.0e-44
Identity = 93/95 (97.89%), Postives = 93/95 (97.89%), Query Frame = 0


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKDLDP FPTGDYFDHPPAPFFD EELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS
Sbjct: 1  MSKDLDPGFPTGDYFDHPPAPFFDSEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of CSPI06G24320 vs. NCBI nr
Match: XP_038883011.1 (aquaporin PIP2-2-like [Benincasa hispida])

HSP 1 Score: 171.4 bits (433), Expect = 4.2e-39
Identity = 84/95 (88.42%), Postives = 88/95 (92.63%), Query Frame = 0


Query: 1  MSKDLDPAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIGSQS 60
          MSKD++P F  GDYFD PPAPFFD +ELLRWSFYRAVIAEFIATLLFLYVGVLTVIG+QS
Sbjct: 1  MSKDVEPGFSAGDYFDQPPAPFFDADELLRWSFYRAVIAEFIATLLFLYVGVLTVIGNQS 60

Query: 61 QDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          Q SAAVC GVGVQGIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 QSSAAVCSGVGVQGIAWAFGGTIFVLVYCTAGISG 95

[Close]

BLAST of CSPI06G24320 vs. NCBI nr
Match: XP_023543200.1 (aquaporin PIP2-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 152.5 bits (384), Expect = 2.0e-33
Identity = 77/99 (77.78%), Postives = 83/99 (83.84%), Query Frame = 0


Query: 1  MSKDLDP----AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          MSKD++      F  GDY D PPAPFFD +EL RWSFYRA+IAEFIATLLFLYVGVLTVI
Sbjct: 1  MSKDVEAGIRGGFSAGDYLDQPPAPFFDADELSRWSFYRAIIAEFIATLLFLYVGVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G+Q Q SA+ CGGVGV GIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 GNQRQSSASACGGVGVLGIAWAFGGTIFVLVYCTAGISG 99

[Close]

BLAST of CSPI06G24320 vs. NCBI nr
Match: XP_022925599.1 (aquaporin PIP2-1-like [Cucurbita moschata])

HSP 1 Score: 151.8 bits (382), Expect = 3.5e-33
Identity = 77/99 (77.78%), Postives = 82/99 (82.83%), Query Frame = 0


Query: 1  MSKDLDP----AFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
          MSKD++      F  GDY D PPAPFFD  EL RWSFYRA+IAEFIATLLFLYVGVLTVI
Sbjct: 1  MSKDVEAGIRGGFSAGDYLDQPPAPFFDTNELSRWSFYRAIIAEFIATLLFLYVGVLTVI 60

Query: 61 GSQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
          G+Q Q SA+ CGGVGV GIAWAFGGTIFVLVYCTAGISG
Sbjct: 61 GNQRQSSASACGGVGVLGIAWAFGGTIFVLVYCTAGISG 99

[Close]

BLAST of CSPI06G24320 vs. TAIR 10
Match: AT2G37180.1 (Aquaporin-like superfamily protein )

HSP 1 Score: 126.7 bits (317), Expect = 1.1e-29
Identity = 67/101 (66.34%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD EEL +WS YRAVIAEF+ATLLFLYV VLTVIG 
Sbjct: 1   MAKDVEGPDGFQTRDYEDPPPTPFFDAEELTKWSLYRAVIAEFVATLLFLYVTVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of CSPI06G24320 vs. TAIR 10
Match: AT5G60660.1 (plasma membrane intrinsic protein 2;4 )

HSP 1 Score: 126.3 bits (316), Expect = 1.4e-29
Identity = 70/105 (66.67%), Postives = 77/105 (73.33%), Query Frame = 0


Query: 1   MSKDLD------PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLT 60
           M+KDLD      PA    DY D PPAPFFD EEL +W  YRAVIAEF+ATLLFLYV +LT
Sbjct: 1   MAKDLDVNESGPPA--ARDYKDPPPAPFFDMEELRKWPLYRAVIAEFVATLLFLYVSILT 60

Query: 61  VIGSQSQDSAAV----CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           VIG ++Q  A      CGGVG+ GIAWAFGG IFVLVYCTAGISG
Sbjct: 61  VIGYKAQTDATAGGVDCGGVGILGIAWAFGGMIFVLVYCTAGISG 103

[Close]

BLAST of CSPI06G24320 vs. TAIR 10
Match: AT2G37170.1 (plasma membrane intrinsic protein 2 )

HSP 1 Score: 125.2 bits (313), Expect = 3.2e-29
Identity = 65/101 (64.36%), Postives = 76/101 (75.25%), Query Frame = 0


Query: 1   MSKDLD--PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVIG- 60
           M+KD++    F T DY D PP PFFD +EL +WS YRAVIAEF+ATLLFLY+ VLTVIG 
Sbjct: 1   MAKDVEGPEGFQTRDYEDPPPTPFFDADELTKWSLYRAVIAEFVATLLFLYITVLTVIGY 60

Query: 61  ---SQSQDSAAVCGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
              S ++     CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  KIQSDTKAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 101

[Close]

BLAST of CSPI06G24320 vs. TAIR 10
Match: AT3G53420.1 (plasma membrane intrinsic protein 2A )

HSP 1 Score: 124.4 bits (311), Expect = 5.5e-29
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MSKDLD----PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

[Close]

BLAST of CSPI06G24320 vs. TAIR 10
Match: AT3G53420.2 (plasma membrane intrinsic protein 2A )

HSP 1 Score: 124.4 bits (311), Expect = 5.5e-29
Identity = 68/103 (66.02%), Postives = 78/103 (75.73%), Query Frame = 0


Query: 1   MSKDLD----PAFPTGDYFDHPPAPFFDPEELLRWSFYRAVIAEFIATLLFLYVGVLTVI 60
           M+KD++      F T DY D PPAPF D  EL +WSFYRAVIAEF+ATLLFLY+ VLTVI
Sbjct: 1   MAKDVEAVPGEGFQTRDYQDPPPAPFIDGAELKKWSFYRAVIAEFVATLLFLYITVLTVI 60

Query: 61  GSQSQ---DSAAV-CGGVGVQGIAWAFGGTIFVLVYCTAGISG 96
           G + Q   D+  V CGGVG+ GIAWAFGG IF+LVYCTAGISG
Sbjct: 61  GYKIQSDTDAGGVDCGGVGILGIAWAFGGMIFILVYCTAGISG 103

The following BLAST results are available for this feature:

BLAST of CSPI06G24320 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P30302	1.6e-28	66.34	Aquaporin PIP2-3 OS=Arabidopsis thaliana OX=3702 GN=PIP2-3 PE=1 SV=1	[more]
Q9FF53	2.0e-28	66.67	Probable aquaporin PIP2-4 OS=Arabidopsis thaliana OX=3702 GN=PIP2-4 PE=1 SV=1	[more]
P43287	4.5e-28	64.36	Aquaporin PIP2-2 OS=Arabidopsis thaliana OX=3702 GN=PIP2-2 PE=1 SV=2	[more]
P43286	7.7e-28	66.02	Aquaporin PIP2-1 OS=Arabidopsis thaliana OX=3702 GN=PIP2-1 PE=1 SV=1	[more]
Q6K215	2.9e-27	61.68	Probable aquaporin PIP2-2 OS=Oryza sativa subsp. japonica OX=39947 GN=PIP2-2 PE=...	[more]

BLAST of CSPI06G24320 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEN2	9.4e-53	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G445100 PE=3 SV=1	[more]
A0A1S3BM90	9.5e-45	97.89	aquaporin PIP2-2-like OS=Cucumis melo OX=3656 GN=LOC103491191 PE=3 SV=1	[more]
A0A6J1ECM6	1.7e-33	77.78	aquaporin PIP2-1-like OS=Cucurbita moschata OX=3662 GN=LOC111432986 PE=3 SV=1	[more]
A0A5A7TZ79	5.4e-32	97.30	Aquaporin PIP2-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold90...	[more]
A0A6J1CQ42	1.2e-31	76.53	aquaporin PIP2-1-like OS=Momordica charantia OX=3673 GN=LOC111013544 PE=3 SV=1	[more]

BLAST of CSPI06G24320 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143247.2	7.9e-46	100.00	aquaporin PIP2-2 [Cucumis sativus] >KAE8647390.1 hypothetical protein Csa_002861...	[more]
NP_001380715.1	2.0e-44	97.89	aquaporin PIP2-9 [Cucumis melo]	[more]
XP_038883011.1	4.2e-39	88.42	aquaporin PIP2-2-like [Benincasa hispida]	[more]
XP_023543200.1	2.0e-33	77.78	aquaporin PIP2-2-like [Cucurbita pepo subsp. pepo]	[more]
XP_022925599.1	3.5e-33	77.78	aquaporin PIP2-1-like [Cucurbita moschata]	[more]

BLAST of CSPI06G24320 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G37180.1	1.1e-29	66.34	Aquaporin-like superfamily protein	[more]
AT5G60660.1	1.4e-29	66.67	plasma membrane intrinsic protein 2;4	[more]
AT2G37170.1	3.2e-29	64.36	plasma membrane intrinsic protein 2	[more]
AT3G53420.1	5.5e-29	66.02	plasma membrane intrinsic protein 2A	[more]
AT3G53420.2	5.5e-29	66.02	plasma membrane intrinsic protein 2A	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000425	Major intrinsic protein	PRINTS	PR00783	MINTRINSICP	coord: 79..103 score: 35.71 coord: 35..54 score: 47.9
IPR000425	Major intrinsic protein	PFAM	PF00230	MIP	coord: 29..95 e-value: 1.5E-15 score: 57.6
IPR023271	Aquaporin-like	GENE3D	1.20.1080.10	Glycerol uptake facilitator protein.	coord: 20..99 e-value: 6.0E-16 score: 60.3
IPR023271	Aquaporin-like	SUPERFAMILY	81338	Aquaporin-like	coord: 26..95
None	No IPR available	PANTHER	PTHR45687:SF62	AQUAPORIN PIP2-1	coord: 10..96
IPR034294	Aquaporin transporter	PANTHER	PTHR45687	AQUAPORIN OR AQUAGLYCEROPORIN RELATED	coord: 10..96

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G24320.1	CSPI06G24320.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
biological_process	GO:0006833	water transport
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0015250	water channel activity
molecular_function	GO:0015267	channel activity