CSPI06G24180 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G24180
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Nuclear transcription factor Y subunit
Location	Chr6: 21706796 .. 21711957 (-)
RNA-Seq Expression	CSPI06G24180
Synteny	CSPI06G24180

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCAAAAGCCTCTTTGCTTTACTACTCCAAATTACTATGCTCTCTCTCTCTCTCTCTCTCTCTGTCTCACTATGACAATCGCTCAACGACCCAATTGACTCTTCAACTCTTTCCTTCTTCTTCTTCTTTTTTTTTTTTTCCAGATTCTCAGCAGGTTTGTTTCTTCCTGAATCTAGGGCTTCGGATTTCCCGAATTTTCCCTCCAAGTGAGTTCATCTCTTTTCTCTGACTTGATTATGACTTATTTTTTCTTCTCATCTCTCAATATTACTCTAGGGTTTTCCCAATTCAGCTCTCTCTCTTTTGGGTTTTGTTTATACTTTAGTATTCTTCTCTCTTGCATGGAATCGGGTTTGTTTAGGTTTATTGATTCAGCGAGTAGGATTTTAAATTTTGGATTACTGGAGTGGAGAATTTTACTTGGTGGGGTTTGTTTGTTTTCAGAATCGGGTGGAATTGGGATCTTGATGGGAATTTAGAAGTCATAAGTTTGTTGATTTTTGCTGTGTTTTTTTTTTTTTTTTTGAAGATTGAATTTTCTCCATCGTGTTCTGTTTTGCTTCTTCGAATTGGAATCTATCCCACTTTTTGGGTGTTGGGTTCTGTTTGTGGTTTGCATGTGGGGATTATGATTCGTGCAGTCCTTAATGGTTGAATTTAGGATGGATTGTCAGTCGTCAAAAAGAAGTGAACGTTTACCTCTTCCCTTGCATGTAGATCATTGGTATGCTCAGCTTAGATGCCAAAGAGAACTTATTTAATCCAAGATACTAAACTATGATTTGATATTTGGCTGGAGCGTTTAGGTGGATTGATCAATATTTTCCTGCAACTTATTCCCCTTTCATTGTTTATATTTCTTGAGTTGCGGTTGGAAGAGTCATATAAAAGGGTCGCCTTTGATTGTTTCTAGTCTAGCATGGAGAGAGATGGAGCACCAAAATAATGAGATATGACCGTGGATGTAGATAACAGAAGTTGTTTTCAAATTTTATGCATGGAAATAAATAGAGCTCAACTCAACGATGCGGGAATTGGTTTATGCTTTGAATTAAACATTATGCTGCTCTTCTGTGTCTTCCAAATTGAAACTGTAGGAGTTCCAAGTTGTGATTTAGCGGAGCCCATAAAGCATTTACAACTTCAACATTCTGCAAGCACAAAGTACAAACTGATTTGTTTTCTGTCTTTGATCTTGAATTCAATTGATGAATATCTGGATAAGTAAACCAGCTTAGCTTAAAAGACCTGAAGAAATTAAAGTTGTAGAGCATTTTACATCCAATGGAGTGATAAGCCTCATTCAAGCGATGATTCAGCAATGCTCTGCACAAGGATTGGAAATAGTCAAAGTATGATATGGGAAATGTTCTGTGATCATAATTGGAAGGAAATGAAAAACATAGTTAATTGACTTAATGATGGCACTTGCTGCTGCTTGAGGCTAAGCTTTTTTTGCCGATCATCTCCTAGCCTCCCCCCTGTATTTTCTCGCAGTTTCCTGAATAGTGAAGACTAACCCACCCTCTCATCTGACAGAAAACTATTGCCTCCACTCTCATCTCAGACCATTTAATTTAATAAGACTGTAAGCAAAATTGCTTCAGCTGGTTATTGAATGTTCTTTTTCTTTTTGTTCTCTCACACGTTATTTTAAACCTAAAGAATAAAACTGTTTTCCCCTCTCTTCAGAAAAGAATATTGGTCAAAGATGATTTTTAAGGTTTTCAAAATGAACAATGTTTAATTCTTCTTCTTTTCCTTTCGATGCCTTCTTTTCAGTGCTTTCATCATAGACTGATGGCTTCTTCTCCGTTTGCCCAACATTTGTTTTGCATGGTCTTGTATTCTAGTCGATTCAATCCTTATGTCTTATCTAACATGTGTATTCCTTAAGAAGGTATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTTTTCAGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCTCCGCCTGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGAAGATGATGATGAGACCACAAAAGATTCACATGGTATGGCCCTCAACTTTGTGGTGTTGCTTGCTAAATCGTGTTATAGTTCAAAGAACGGCACTTATTGTTTTTAGCCTCTTTGGTTATGAATTGGAATTATTATACATTTGAGGTCAATGACAATCTAGCCTCATTAACATATTATTGTCAAATTCACCAGCAAGTTTTGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGTGAGTTCAATTTGCAAGTCTGGTTGATTATTATTATTTAAAAAAAAAAAAATTAGAGACATTCTTCTGACTCTTGGAGTCCAGGTTTTGAATATTGGACAACATTGGTGGGATTATGTGCTTATTTTAATCTGTTTTAGGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCGGGAGTGATGGCTGCCTATGGGCATCAACCGGTACGTAGGTTAAAATCATAGAAGATCAGTCATGAGATATTTAGATGGTACATATAGATAAGTTATATGTATATATTTCTTATAATTTTTGCACCATATACACAAACTTTTTCGGTGTATAGTAGCCATGGGTAATTTTGATAGTACTCTTTACTTTTTTTTTCCTTTCCTATTGCTTTACCTTTTCAAGTATTCATGAACTTTCAATGTTGTTCCTTGTTCAGATTTTCACTCTCTCAAATTATTTCAATTAAAATAACATTTGACAGTACAGAGTTTATGAGCGTATCAAGCGAACTAACTGAAAATTTCCAGTTTCTTGGAAGAGGTTGTAGTGTAATAGTTGCCATATCTTGGCCTGAAATTATTTATTTATTGGCCACAACGACAAGGTCGTATGTCAACGTCTGGGGTCATTGTGCAATGTTACCCCTTTTTCCTTATATGTAAGAATTAAAGCTTGCCCTTGACAATCCTTCTTATGGTAGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCATTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCTAAACAATATCAAGGGATTCTAAGGCGAAGACAGGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGGTACGACTGCTATTTAGATGATCGCCTTTCTTGTACTACAACTTGTCTCTTATACATGTTAAAGTAGCTGGAAATCTAGCAATGCCTTCTAATTGTATTGCGCTTTTAATGAAGCTCATTCTTCCCTTTGGTTCAAATTTGATTAGGTACTCCATAAAATTCTCTCACCTGAGTAGTTTTCTATTGTTTAATTACCATAAACTTGTGAGTGAAGGGTGACTAAAAAATTATTTTGTTGTGCTTGACAGTGGGTGAATGTACTCACCTAGGCTTTTTTAGCATAGGTATCATCAGTAATTTTTCTGGGAATATACTTGATTTATTTACCTATTCTACCCTGAATATTTTGAATGCTCAGGATATCATTATTGCCAAATGATTAATATTCCATCTACCCACATTAAAAAGGTTTGCTTTATTCTCATAATCAGATTCTGCGCAAGTGGGAAGTAACCTAAGTATTCTAAACTGGCTGCAAGGATTGTTGAGTGCTAAAATGAATGTGGTTAGGTACCAAATAGCACACTTATATGAATTGCCAAGTCGTTGTTTGAAGACCTTACAAAACTTATAAAAAAATTCAAAGAGGGCATAATATTGCATTGTAATTATGGTTGTGTAAGACCGGAGGTTCTCAACTGAAGGTAAAATCACAACTGAGTTGGGATCAAAGCATTTACGTTTTAAATACTGAGTCAAAGCTGGTCTTTCACAATTTCATGATTTCTCCTTGCCGTGTATAGTTGTTTTTATAGCTAATTCATTACCATGTGAGATGAGATGGCTTGGACACGGTTAGTTTTGAAAAATCAAATGTTGTTGAGTGTTGGATGGTCATTGAGCGGGTTATTGTTTCTGTATGTTTGCAGAGTGAAGACTGTTCACACTCCACCTCTTTCTCCCTCCATTTGAACAATTCTTTTGCTGTAGCTTATATCTGGGTATGCATGTTTCTGAAATTCCTCTAATATTTAGCCTGTGTTGTGTTATGCAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGCTCTGATGCAGCACCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAATCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATATGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGATCTGGTGAGAGAGGTGATGATGGAGACTGCTCAGGACAGCAGCGAAGTATCTCAGAAAATCAAGCTGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCATAAATATGGGCTGCCTCTCTTGGGGCTACATTCCCTGGCAGTTCTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTCCTTAATCGTAAAGGAGATGGATAATATAAGTTGGCCATTTGGACCTTAGTTCTAGTTAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACGCTGTTCTTCTCAATTTCCAAACAACCTTGTTTAATGGAATGCTTATCTGTTATGTACTTGTGAATGTGTCGTGAACTTTGATCCATAATTTGGTTGCTAATTTCATATAAGTTCTCCAGGTACCAAATATTTCTTGCTATTATATGCATCCTGATTTCAGCGTCCACTAGGAATATTGGAAAATGATCTAAACTTGATGATGCTTATTGGTTT

mRNA sequence

CCCAAAAGCCTCTTTGCTTTACTACTCCAAATTACTATGCTCTCTCTCTCTCTCTCTCTCTCTGTCTCACTATGACAATCGCTCAACGACCCAATTGACTCTTCAACTCTTTCCTTCTTCTTCTTCTTTTTTTTTTTTTCCAGATTCTCAGCAGGTTTGTTTCTTCCTGAATCTAGGGCTTCGGATTTCCCGAATTTTCCCTCCAAGTATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTTTTCAGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCTCCGCCTGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGAAGATGATGATGAGACCACAAAAGATTCACATGCAAGTTTTGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCGGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCATTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCTAAACAATATCAAGGGATTCTAAGGCGAAGACAGGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGCTCTGATGCAGCACCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAATCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATATGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGATCTGGTGAGAGAGGTGATGATGGAGACTGCTCAGGACAGCAGCGAAGTATCTCAGAAAATCAAGCTGCACAGAGGCGTCTTGCCATCAAGTGAACCTCCTGGTTGCATAAATATGGGCTGCCTCTCTTGGGGCTACATTCCCTGGCAGTTCTCTGCTAGGCGGCAAATCATTCTTGGCTTTGTTCTGGTGCTTGTTCCTTAATCGTAAAGGAGATGGATAATATAAGTTGGCCATTTGGACCTTAGTTCTAGTTAAGTCCTTGGATGCTTTATTCCATCAACCTCCCCCATTTTTAACTTGTGTATAGAACAGACTCCATAGATTTCAAACGCTGTTCTTCTCAATTTCCAAACAACCTTGTTTAATGGAATGCTTATCTGTTATGTACTTGTGAATGTGTCGTGAACTTTGATCCATAATTTGGTTGCTAATTTCATATAAGTTCTCCAGGTACCAAATATTTCTTGCTATTATATGCATCCTGATTTCAGCGTCCACTAGGAATATTGGAAAATGATCTAAACTTGATGATGCTTATTGGTTT

Coding sequence (CDS)

ATGCAGTCAAAGTCTAAAAGTGTGAATCAACTAGAATCTGAACCACCAAATATGCAGCAGACTAGTAGTTTTTCAGAACCTTGGTGGCGTAGTATTGGGTACAATCATATCTCTCCGCCTGCAGCTGGAGGAAATGTGTCCAATTCAACATCACTGGAATGCACTAATGGTGCTTCAGAATCAAATGATGGTCAGTCAATGTCAAATGATGATTTAAATGAAGAAGATGATGATGAGACCACAAAAGATTCACATGCAAGTTTTGGGCAAGTACAGCACAACTGTCAGCATGCTGTTTCTGCTGCACCTATAGTGCATAGTGGATGTATCACGCAACCTCCTCAGCTTGAACTTGTAGGCCACTCTATTGCATGTGCATCAAACCCATATCAGGATCCTTATTACGCGGGAGTGATGGCTGCCTATGGGCATCAACCGGGTTACCCTCCTTTTCTTGGGATGCCACATGCTAGAATGGCATTGCCCCTTGAGGTGACACAGGAGCCTGTTTTTGTGAATGCTAAACAATATCAAGGGATTCTAAGGCGAAGACAGGCACGTGCTAAAGCAGAGGTTGAGAACAAACTAATAAAAGTTAGAAAGCCATATCTGCATGAATCTCGTCACCAGCATGCCATGAGACGGGCAAGGGGTAGTGGAGGACGATTTGCCAAGAAAAATGAAACTAATTCCTTGGGTTCTACTATGAAGGACAAGGACTCCGGTTCTGGTCAAGCTATCTCATCGCACTCTGCTGGTTCATCTGGCTCTGATGCAGCACCTTGTGCCTTGGCTGAAACCTGGAATTCTTCCAATGGCCAACAAGAATCAAGGACCCAGTTGCATGAAGCATATGAAGCTCGAAGTTATATGAATGGAAGTAGCCAATTTCATAATTACAGTAGCTTCCAAGCTTCTTCCTATGGTTTACGATCTGGTGAGAGAGGTGATGATGGAGACTGCTCAGGACAGCAGCGAAGTATCTCAGAAAATCAAGCTGCACAGAGGCGTCTTGCCATCAAGTGA

Protein sequence

MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNYSSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK*

Homology

[Close]

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot
Match: Q9LXV5 (Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NFYA1 PE=2 SV=1)

HSP 1 Score: 207.2 bits (526), Expect = 2.9e-52
Identity = 139/278 (50.00%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQHAVSAAPI--VHSGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS 272
                +D+G        +  SSGS+       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot
Match: Q945M9 (Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NFYA9 PE=1 SV=1)

HSP 1 Score: 193.0 bits (489), Expect = 5.7e-48
Identity = 159/347 (45.82%), Postives = 192/347 (55.33%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNG 60
           M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLE 120
           A ESN  +S SN D N  + +     S  S G      Q +      +H G    PP  +
Sbjct: 66  ALESNGSKSPSNRD-NTVNKESQVTTSPQSAGDYSDKNQES------LHHGITQPPPHPQ 125

Query: 121 LVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAK 180
           LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAK
Sbjct: 126 LVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAK 185

Query: 181 QYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGST 240
           QYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S 
Sbjct: 186 QYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASK 245

Query: 241 MKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS 300
            K ++  +G    S S  SS SD       E W                       NG  
Sbjct: 246 RKAEEKSNGHVTQSPS--SSNSDQ-----GEAW-----------------------NGDY 303

Query: 301 QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK 342
           +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 RTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

[Close]

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot
Match: Q84JP1 (Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NFYA7 PE=1 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 7.0e-22
Identity = 65/140 (46.43%), Postives = 92/140 (65.71%), Query Frame = 0


Query: 121 HSIACASNPYQDPYYAGVMA--AYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQ 180
           +S+A    PY DPYY  + A     +   +   +G+    + LP +  +EPVFVNAKQY 
Sbjct: 51  NSMAPGQYPYPDPYYRSIFAPPPQPYTGVHLQLMGVQQQGVPLPSDAVEEPVFVNAKQYH 110

Query: 181 GILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNETNSLGSTM 240
           GILRRRQ+RA+ E +NK+IK RKPYLHESRH HA+RR RG GGRF  AKK + +   S+ 
Sbjct: 111 GILRRRQSRARLESQNKVIKSRKPYLHESRHLHAIRRPRGCGGRFLNAKKEDEHHEDSSH 170

Query: 241 KDKDS-GSGQAISSHSAGSS 256
           ++K +  +G++  + S+G+S
Sbjct: 171 EEKSNLSAGKSAMAASSGTS 190

[Close]

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot
Match: Q8VY64 (Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NFYA4 PE=1 SV=1)

HSP 1 Score: 104.0 bits (258), Expect = 3.5e-21
Identity = 63/128 (49.22%), Postives = 76/128 (59.38%), Query Frame = 0


Query: 129 PYQDPYYAGVMAAYGHQP-GYP----PFLGMPHARMALPLEVTQEPVFVNAKQYQGILRR 188
           PY DPYY  V A   + P  YP      +GM    + L  +  +EPVFVNAKQY GILRR
Sbjct: 54  PYPDPYYRSVFAQQAYLPHPYPGVQLQLMGMQQPGVPLQCDAVEEPVFVNAKQYHGILRR 113

Query: 189 RQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRF--AKKNETNSLGSTMKDKDS 248
           RQ+RAK E  N+ IK +KPY+HESRH HA+RR RG GGRF  AKK   +         D 
Sbjct: 114 RQSRAKLEARNRAIKAKKPYMHESRHLHAIRRPRGCGGRFLNAKKENGDHKEEEEATSDE 173

Query: 249 GSGQAISS 250
            + +A SS
Sbjct: 174 NTSEASSS 181

[Close]

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot
Match: Q9SYH4 (Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NFYA5 PE=2 SV=1)

HSP 1 Score: 99.4 bits (246), Expect = 8.5e-20
Identity = 74/217 (34.10%), Postives = 111/217 (51.15%), Query Frame = 0


Query: 87  SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVGHSIACAS----NPYQDPYYAGVMAAY 146
           + G+   N   +++ + +V    +   P    +  S+ CA     N +  P YA    A 
Sbjct: 96  NLGKPIENYTKSITTSSMVSQDSVFPAPTSGQISWSLQCAETSHFNGFLAPEYASTPTAL 155

Query: 147 GHQPGYPPFLGMPHARMALPLEVTQ-EPVFVNAKQYQGILRRRQARAKAEVENKLIKVRK 206
            H       +G+  +R+ LP  + + EP+FVNAKQY  ILRRR+ RAK E +NKLIK RK
Sbjct: 156 PHL----EMMGLVSSRVPLPHHIQENEPIFVNAKQYHAILRRRKHRAKLEAQNKLIKCRK 215

Query: 207 PYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKDSGSGQ--AISSHSAGS--SGS 266
           PYLHESRH HA++RARGSGGRF    +     +++      +GQ  ++S H  GS    S
Sbjct: 216 PYLHESRHLHALKRARGSGGRFLNTKKLQESSNSLCSSQMANGQNFSMSPHGGGSGIGSS 275

Query: 267 DAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGS 295
             +P + +   N     Q   +     + A + M+G+
Sbjct: 276 SISPSSNSNCINMFQNPQFRFSGYPSTHHASALMSGT 308

[Close]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL
Match: A0A0A0KEL9 (Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G439960 PE=3 SV=1)

HSP 1 Score: 657.1 bits (1694), Expect = 3.9e-185
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL
Match: A0A1S3BNK4 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 639.4 bits (1648), Expect = 8.5e-180
Identity = 331/341 (97.07%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVSAAPIVHSGCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL
Match: A0A1S4DXQ9 (Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 PE=3 SV=1)

HSP 1 Score: 623.2 bits (1606), Expect = 6.3e-175
Identity = 326/341 (95.60%), Postives = 334/341 (97.95%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVSAAPIVHSGCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL
Match: A0A6J1JHB5 (Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC111484375 PE=3 SV=1)

HSP 1 Score: 601.3 bits (1549), Expect = 2.6e-168
Identity = 315/343 (91.84%), Postives = 328/343 (95.63%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQTSS+SEPWWRSIGYNHIS PAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNHISSPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDD+TTKDSHA S+GQVQ+NCQHAVSAAP VH GCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNCQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDK 240
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  ST+K+K
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTVKNK 240

Query: 241 DSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN 300
           DSGSGQA SSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAYEARSY+NGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYEARSYVNGSGQFHN 300

Query: 301 YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK 342
           YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL
Match: A0A6J1FTP1 (Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC111448699 PE=3 SV=1)

HSP 1 Score: 597.4 bits (1539), Expect = 3.7e-167
Identity = 314/343 (91.55%), Postives = 327/343 (95.34%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSK +SVNQLESEPPNMQQTSS+SEPWWRSIGYN ISPPAAGGN+SNSTSLEC NGASE
Sbjct: 1   MQSKPRSVNQLESEPPNMQQTSSYSEPWWRSIGYNQISPPAAGGNLSNSTSLECPNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHA-SFGQVQHNCQHAVSAAPIVHSGCITQPPQLELV 120
           SNDG SMSNDDLNE+DDD+TTKDSHA S+GQVQ+N QHAVSAAP VH GCITQPPQLELV
Sbjct: 61  SNDGPSMSNDDLNEDDDDDTTKDSHAVSYGQVQNNSQHAVSAAPTVHGGCITQPPQLELV 120

Query: 121 GHSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180
           GHSIACASN YQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG
Sbjct: 121 GHSIACASNLYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQG 180

Query: 181 ILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDK 240
           ILRRRQARAKAEVENKLIK+RKPYLHESRHQHAMRRARGSGGRFAKKNE NS  STMK+K
Sbjct: 181 ILRRRQARAKAEVENKLIKIRKPYLHESRHQHAMRRARGSGGRFAKKNEVNSSSSTMKNK 240

Query: 241 DSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHN 300
           DSGSGQA SSHSAGSSGS+AAPCALAETWNSSNGQQE+RTQLHEAY+ARSY+NGS QFHN
Sbjct: 241 DSGSGQAFSSHSAGSSGSEAAPCALAETWNSSNGQQEARTQLHEAYKARSYVNGSEQFHN 300

Query: 301 YSSFQASSYGLRSGERGDDGDCSGQQR-SISENQAAQRRLAIK 342
           YSSFQASSY LRSGERGDDGDCSGQQR SISENQAAQRRLAIK
Sbjct: 301 YSSFQASSYALRSGERGDDGDCSGQQRGSISENQAAQRRLAIK 343

[Close]

BLAST of CSPI06G24180 vs. NCBI nr
Match: XP_011657641.1 (nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_011657642.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743004.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_031743005.1 nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >KGN48130.1 hypothetical protein Csa_003198 [Cucumis sativus])

HSP 1 Score: 657.1 bits (1694), Expect = 8.1e-185
Identity = 341/341 (100.00%), Postives = 341/341 (100.00%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of CSPI06G24180 vs. NCBI nr
Match: XP_011657643.1 (nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_011657644.1 nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus])

HSP 1 Score: 641.0 bits (1652), Expect = 6.0e-180
Identity = 336/341 (98.53%), Postives = 336/341 (98.53%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of CSPI06G24180 vs. NCBI nr
Match: XP_008449708.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo] >XP_008449709.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis melo])

HSP 1 Score: 639.4 bits (1648), Expect = 1.7e-179
Identity = 331/341 (97.07%), Postives = 339/341 (99.41%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVSAAPIVHSGCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 341

[Close]

BLAST of CSPI06G24180 vs. NCBI nr
Match: XP_031743006.1 (nuclear transcription factor Y subunit A-1 isoform X3 [Cucumis sativus])

HSP 1 Score: 632.5 bits (1630), Expect = 2.1e-177
Identity = 333/341 (97.65%), Postives = 333/341 (97.65%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG
Sbjct: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
           HSI        DPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 HSI--------DPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 333

[Close]

BLAST of CSPI06G24180 vs. NCBI nr
Match: XP_008449711.1 (PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo] >XP_016900766.1 PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis melo])

HSP 1 Score: 623.2 bits (1606), Expect = 1.3e-174
Identity = 326/341 (95.60%), Postives = 334/341 (97.95%), Query Frame = 0


Query: 1   MQSKSKSVNQLESEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60
           MQSKSKSVNQ ESEPPNMQQTSS+SEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE
Sbjct: 1   MQSKSKSVNQPESEPPNMQQTSSYSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGASE 60

Query: 61  SNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLELVG 120
           SNDGQSMSNDDLNE+DDD+TTKDSHAS+GQVQ+NCQHAVSAAPIVHSGCITQPPQLEL  
Sbjct: 61  SNDGQSMSNDDLNEDDDDDTTKDSHASYGQVQNNCQHAVSAAPIVHSGCITQPPQLEL-- 120

Query: 121 HSIACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180
              ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI
Sbjct: 121 ---ACASNPYQDPYYAGVMAAYGHQPGYPPFLGMPHARMALPLEVTQEPVFVNAKQYQGI 180

Query: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240
           LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD
Sbjct: 181 LRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGSTMKDKD 240

Query: 241 SGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSSQFHNY 300
           SGSGQAISSHSAGSSGS+AA CALAETWNSSNGQQE+RTQLHEAYEARSY+NGSSQFHNY
Sbjct: 241 SGSGQAISSHSAGSSGSEAAHCALAETWNSSNGQQEARTQLHEAYEARSYVNGSSQFHNY 300

Query: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 342
           SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK
Sbjct: 301 SSFQASSYGLRSGERGDDGDCSGQQRSISENQAAQRRLAIK 336

[Close]

BLAST of CSPI06G24180 vs. TAIR 10
Match: AT5G12840.2 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 139/277 (50.18%), Postives = 173/277 (62.45%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQHAVSAAPI--VHSGCITQPPQ 120
           ESND  S S D     ++D T KDS A  S     H  +    A  I  +H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS 272
               +D+G        +  SSGS+       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of CSPI06G24180 vs. TAIR 10
Match: AT5G12840.4 (nuclear factor Y, subunit A1 )

HSP 1 Score: 208.0 bits (528), Expect = 1.2e-53
Identity = 139/277 (50.18%), Postives = 173/277 (62.45%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDETTKDSHA--SFGQVQHNCQHAVSAAPI--VHSGCITQPPQ 120
           ESND  S S D     ++D T KDS A  S     H  +    A  I  +H   + QPP 
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSDNHGMEGNDPALSIRNMHDQPLVQPP- 120

Query: 121 LELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNA 180
            ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VNA
Sbjct: 121 -ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVNA 180

Query: 181 KQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGS 240
           KQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +   
Sbjct: 181 KQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA--- 240

Query: 241 TMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS 272
               +D+G        +  SSGS+       ET NSS
Sbjct: 241 ---GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 268

[Close]

BLAST of CSPI06G24180 vs. TAIR 10
Match: AT5G12840.1 (nuclear factor Y, subunit A1 )

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-53
Identity = 139/278 (50.00%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQHAVSAAPI--VHSGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS 272
                +D+G        +  SSGS+       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of CSPI06G24180 vs. TAIR 10
Match: AT5G12840.3 (nuclear factor Y, subunit A1 )

HSP 1 Score: 207.2 bits (526), Expect = 2.1e-53
Identity = 139/278 (50.00%), Postives = 173/278 (62.23%), Query Frame = 0


Query: 1   MQSKSKSVNQLE-SEPPNMQQTSSFSEPWWRSIGYNHISPPAAGGNVSNSTSLECTNGAS 60
           MQSK    N+ E +    +QQ   ++EPWW++  +  +      G  SNS+SL+C NG S
Sbjct: 1   MQSKPGRENEEEVNNHHAVQQPMMYAEPWWKNNSFGVVPQARPSGIPSNSSSLDCPNG-S 60

Query: 61  ESNDGQSMSNDDLNEEDDDETTKDSHA---SFGQVQHNCQHAVSAAPI--VHSGCITQPP 120
           ESND  S S D     ++D T KDS A   S     H  +    A  I  +H   + QPP
Sbjct: 61  ESNDVHSASEDGALNGENDGTWKDSQAATSSRSVDNHGMEGNDPALSIRNMHDQPLVQPP 120

Query: 121 QLELVGHSIACASNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVN 180
             ELVGH IAC  NPYQDPYY G+M AYGHQ  G+ P+LGMP  R ALPL++ QEPV+VN
Sbjct: 121 --ELVGHYIACVPNPYQDPYYGGLMGAYGHQQLGFRPYLGMPRERTALPLDMAQEPVYVN 180

Query: 181 AKQYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLG 240
           AKQY+GILRRR+ARAKAE+E K+I+ RKPYLHESRH+HAMRRAR SGGRFAKK+E  +  
Sbjct: 181 AKQYEGILRRRKARAKAELERKVIRDRKPYLHESRHKHAMRRARASGGRFAKKSEVEA-- 240

Query: 241 STMKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSS 272
                +D+G        +  SSGS+       ET NSS
Sbjct: 241 ----GEDAGGRDRERGSATNSSGSEQVETDSNETLNSS 269

[Close]

BLAST of CSPI06G24180 vs. TAIR 10
Match: AT3G20910.1 (nuclear factor Y, subunit A9 )

HSP 1 Score: 193.0 bits (489), Expect = 4.0e-49
Identity = 159/347 (45.82%), Postives = 192/347 (55.33%), Query Frame = 0


Query: 1   MQSKSKS-VNQLESEPPNMQQTSSFS-EPWWR-SIGYNHISPPAAGGNVSNSTSLECTNG 60
           M SKS S  N+++SE      +S  S  PW R +   N  S   AG   S S +L     
Sbjct: 6   MHSKSDSGGNKVDSEVHGTVSSSINSLNPWHRAAAACNANSSVEAGDKSSKSIAL----- 65

Query: 61  ASESNDGQSMSNDDLNEEDDDETTKDSHASFGQVQHNCQHAVSAAPIVHSGCITQPPQLE 120
           A ESN  +S SN D N  + +     S  S G      Q +      +H G    PP  +
Sbjct: 66  ALESNGSKSPSNRD-NTVNKESQVTTSPQSAGDYSDKNQES------LHHGITQPPPHPQ 125

Query: 121 LVGHSIACA-SNPYQDPYYAGVMAAYGHQP-GYPPFLGMPHARMALPLEVTQEPVFVNAK 180
           LVGH++  A SNPYQDPYYAGVM AYGH P G+ P+ GMPH+RM LP E+ QEPVFVNAK
Sbjct: 126 LVGHTVGWASSNPYQDPYYAGVMGAYGHHPLGFVPYGGMPHSRMPLPPEMAQEPVFVNAK 185

Query: 181 QYQGILRRRQARAKAEVENKLIKVRKPYLHESRHQHAMRRARGSGGRFAKKNETNSLGST 240
           QYQ ILRRRQARAKAE+E KLIK RKPYLHESRHQHAMRR RG+GGRFAKK  TN+  S 
Sbjct: 186 QYQAILRRRQARAKAELEKKLIKSRKPYLHESRHQHAMRRPRGTGGRFAKK--TNTEASK 245

Query: 241 MKDKDSGSGQAISSHSAGSSGSDAAPCALAETWNSSNGQQESRTQLHEAYEARSYMNGSS 300
            K ++  +G    S S  SS SD       E W                       NG  
Sbjct: 246 RKAEEKSNGHVTQSPS--SSNSDQ-----GEAW-----------------------NGDY 303

Query: 301 QFHNYSSFQASSYGLRSGERGDDGDCSGQQ-RSISENQAAQRRLAIK 342
           +       Q+S+Y     +R ++G+CSGQQ  S+S N  +Q RLAIK
Sbjct: 306 RTPQGDEMQSSAY-----KRREEGECSGQQWNSLSSNHPSQARLAIK 303

The following BLAST results are available for this feature:

BLAST of CSPI06G24180 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9LXV5	2.9e-52	50.00	Nuclear transcription factor Y subunit A-1 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q945M9	5.7e-48	45.82	Nuclear transcription factor Y subunit A-9 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q84JP1	7.0e-22	46.43	Nuclear transcription factor Y subunit A-7 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q8VY64	3.5e-21	49.22	Nuclear transcription factor Y subunit A-4 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]
Q9SYH4	8.5e-20	34.10	Nuclear transcription factor Y subunit A-5 OS=Arabidopsis thaliana OX=3702 GN=NF...	[more]

BLAST of CSPI06G24180 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KEL9	3.9e-185	100.00	Nuclear transcription factor Y subunit OS=Cucumis sativus OX=3659 GN=Csa_6G43996...	[more]
A0A1S3BNK4	8.5e-180	97.07	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A1S4DXQ9	6.3e-175	95.60	Nuclear transcription factor Y subunit OS=Cucumis melo OX=3656 GN=LOC103491506 P...	[more]
A0A6J1JHB5	2.6e-168	91.84	Nuclear transcription factor Y subunit OS=Cucurbita maxima OX=3661 GN=LOC1114843...	[more]
A0A6J1FTP1	3.7e-167	91.55	Nuclear transcription factor Y subunit OS=Cucurbita moschata OX=3662 GN=LOC11144...	[more]

BLAST of CSPI06G24180 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657641.1	8.1e-185	100.00	nuclear transcription factor Y subunit A-1 isoform X1 [Cucumis sativus] >XP_0116...	[more]
XP_011657643.1	6.0e-180	98.53	nuclear transcription factor Y subunit A-1 isoform X2 [Cucumis sativus] >XP_0116...	[more]
XP_008449708.1	1.7e-179	97.07	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X1 [Cucumis m...	[more]
XP_031743006.1	2.1e-177	97.65	nuclear transcription factor Y subunit A-1 isoform X3 [Cucumis sativus]	[more]
XP_008449711.1	1.3e-174	95.60	PREDICTED: nuclear transcription factor Y subunit A-1-like isoform X2 [Cucumis m...	[more]

BLAST of CSPI06G24180 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G12840.2	1.2e-53	50.18	nuclear factor Y, subunit A1	[more]
AT5G12840.4	1.2e-53	50.18	nuclear factor Y, subunit A1	[more]
AT5G12840.1	2.1e-53	50.00	nuclear factor Y, subunit A1	[more]
AT5G12840.3	2.1e-53	50.00	nuclear factor Y, subunit A1	[more]
AT3G20910.1	4.0e-49	45.82	nuclear factor Y, subunit A9	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001289	Nuclear transcription factor Y subunit A	PRINTS	PR00616	CCAATSUBUNTB	coord: 169..191 score: 74.15 coord: 200..223 score: 81.94
IPR001289	Nuclear transcription factor Y subunit A	SMART	SM00521	cbf3	coord: 165..226 e-value: 2.3E-35 score: 133.5
IPR001289	Nuclear transcription factor Y subunit A	PFAM	PF02045	CBFB_NFYA	coord: 168..223 e-value: 1.9E-26 score: 92.4
IPR001289	Nuclear transcription factor Y subunit A	PANTHER	PTHR12632	TRANSCRIPTION FACTOR NF-Y ALPHA-RELATED	coord: 31..328
IPR001289	Nuclear transcription factor Y subunit A	PROSITE	PS51152	NFYA_HAP2_2	coord: 166..226 score: 36.156738
None	No IPR available	GENE3D	6.10.250.2430		coord: 166..228 e-value: 3.0E-30 score: 106.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..29
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 224..256
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..220
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..85
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 307..341
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 206..260
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 41..68
None	No IPR available	PANTHER	PTHR12632:SF59	NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT A-9	coord: 31..328
IPR018362	CCAAT-binding factor, conserved site	PROSITE	PS00686	NFYA_HAP2_1	coord: 171..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G24180.1	CSPI06G24180.1	mRNA
CSPI06G24180.2	CSPI06G24180.2	mRNA
CSPI06G24180.3	CSPI06G24180.3	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006357	regulation of transcription by RNA polymerase II
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0016602	CCAAT-binding factor complex
molecular_function	GO:0000981	DNA-binding transcription factor activity, RNA polymerase II-specific
molecular_function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity