CSPI06G23330 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G23330
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionPeptidyl-prolyl cis-trans isomerase G
LocationChr6: 21011173 .. 21013957 (+)
RNA-Seq ExpressionCSPI06G23330
SyntenyCSPI06G23330
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATGTCCAGATCCATGTTACTTGTGTTTTTGTTCGTTATTCTCATTATCACTTCGCAGTTCGAGTGGAGGCAACAACTAGTACCTGAGGTTGACTCCACGGTGAACTCCCAGAAGCAGCAGCAGCAGATATCAACGAGGGAAGAAGCAGTTAAGGAGAAGGTAATAAGTCCTCTATTAATTACATTATCAACCAATCGAATTTGTACTTGTGCTTATAATTTATTAGGGTCTAAATTGAATTAGTGTTGAATGTCCGTATGATATTTGTGAAGAAAACTGAATGATTAGTTCACAGGCGCATAGAGATGTGGAGGTGTGTCCATCATGCTAGATTCAGGGTGTAGGGTACTTGCTAAAGATGTAATCAAGTGATTTCTTCCTTGGGTATCGGTTACAGATGGCATGTTGGGTAGTGTATGTCTGGTACATATAGGAGCTAAGTAGAGCTATAGAAGAGGAATGAGTTATCAATAAATTTAACTTGGGAAGTTTAAGGAGTTCTTGGATAGGATAGTGGGTCAGTAATGCATTATTCATGCTCCCATTATGAGTTTCATTGCCTCCTTTACTTTTTCTGTTTAAAAGTAAAAAGAAAAAGTATTCTAGCGGGGTGATATTTAGTTTTCGGGACTTGACCCTATGTAAAATGCATCTATTTCCTTTATGTGTGATGCACTAGAAATAAAATAGTAATCTAACTGATACTCTTGGCAAGGTCTGACCAATAAACATTTTGATGATTTAATATAGACATGGTATGGCAATAAGTTTAACAATTTACCCTTTGCTGTGGAAATTACATCTGACTTGAAGCAGCAATTGTAACTATTGTCAATGTAATACGTGATTTTTTCCGTGGAATTGCCTAAAAGATATGGAGAATTCACTACATATGTGAATATTATGAATCAGTGTTTCTGATTGTTATATTTTGATTATTGCCAAGCCACTCTCTGTGCTCATGTTTGAAGAAAATATCTCTGTTACCGTTAGTGCTGTCTCATGTCCTTTTCTAAACTACCTTTCTTGTAGATGTTACCTTTAATTTTATGGCATTGAAAGCTTGGTTAGTCCTAGGTAGAGTGTAGCTTTTGAGTAGGAAAGGATTTTCCACACAGTTGCTTGAAAACTATCCAAATTCTATCACATTGACCTGAAATAAGACAATTTAAGCTTTCCTAGGTTTGGATTATTTTGTGTTTTTGGCCTAAGGGCCTAAGGCTCTTGAAGTAAAAATATTATGTTGTTTTCTTCTTAAGGATAGACTTGGGGTAAAAATATGATAGGACCCTAATAGTGAGAGTGTATTCACGAAGGAATAAGAAGAGGAAGGAAAAGGGTGACTGAGAGTTAGTAATTTGGTTTGGTGTGGGCCCTTAGGAATATTGATTGTTAATTTGTTGGGAAGGGCTGAGTAAGTTTGTTATTTTTATAATATCTCTTTGTTGTTAGGGATGGGCTTCTTTTTGCTCTATAGAGAATTGTGGAGATCGGAAGCCCTCAAATCTTCTCCTGCCGTTGATAAATAAAATTGAGGCCGAGGCCTATCAAAATATTTATCAGTAGATTGTCAAATGAAAGCTTAAATGATATTTACCCGACAATCAAGTTAAATTGCACTGAATTATGAGGCCAGTTAAATGGGTCCTCATCTGTAAGTGAGCCAATTTTTTCTCTCTGCCTTCCAAAAAGTTATAAGTTTCTTTTTGAATCTCTTGTATGATCCAAATTTGTGTTTATTCAAATCCACAGATGAGGCCCTTAAGGTTATATAAAATTTAAAACTTCCTTCCTTTTTTGAATGTTAAAAAATTCCCCTTTGAGCACTCCTTTTGAAGAAATTGACAGAACCATGAAATTTTTGTATCTTATAGTTTTATTATTATTATCTTTTCAGATTTGTTTTGAAGTATACGTTTCTGTTTCATAAAGTTATTAAGGAGTTGATCAGGAGCAGCATTTTAGTTTAGACTTTAGAGGGGTGGAAAAGTAATCTGGCCTTAAGTAAATCATAAGCATCTTTTTAGCCAGCAGGCGTTTGGATAATTAAGCACTTTCTGTTTAAGGATAGACTTAGCTTGACGACTTCTCCACACAATGTTCGATAGAAGACAACCACGGGGTGCCTGTTTGGGTCAGAAACAGAACAATGTAACTATAAAAAGAATAAGGATCAGTTATATTGGTCGAAACTTGAAAGGCACAGAATTTTTCAACCAGATAAAAGAGAATCATTGATGACTATTTTTATCTTCCTCTGGATTGTACCTGACATTGATTTGGAATTCGAGATAAACAATGTTGGTTCCTGATGGGATGATAAGTTACAGTAATTCAAAAGCCTGTCAGTTGGTATGACAAAACTCACTAACTAGTAAATTTCACAGGGAAATATCATACCAATCCCAAATTTTATTGCTTGGAATTTGTCTACGTGCCTCCATTTTAAATGGAGAGTAGAGTATGACATCAAAAGCGATCATGGGGATCCTTGTTTACTTCCCAGATAGACAACTCAAGTCCTGCCTTTTATTTCCCTTTATTGTCTGAGCTTTGTTTTCTTCATTGTGGTACTCTGCTACTTTTTAATTTTTTACACCTATTGTTTTGAATTGGTATGTAGATATTGTTATCACAAGAAAGGAATATCCAGAGGCTCAATGAAGTTGTACGAAGCCTCCGACAACAGTTGCAGCAGTGTAGAGGCAGGAACATTACAAATGGTACAGCTCTACTGAGTGCACATATTCTCGAGCTCGAACGACTTCATGTATTAGAGGAC

mRNA sequence

ATGATGTCCAGATCCATGTTACTTGTGTTTTTGTTCGTTATTCTCATTATCACTTCGCAGTTCGAGTGGAGGCAACAACTAGTACCTGAGGTTGACTCCACGGTGAACTCCCAGAAGCAGCAGCAGCAGATATCAACGAGGGAAGAAGCAGTTAAGGAGAAGATATTGTTATCACAAGAAAGGAATATCCAGAGGCTCAATGAAGTTGTACGAAGCCTCCGACAACAGTTGCAGCAGTGTAGAGGCAGGAACATTACAAATGGTACAGCTCTACTGAGTGCACATATTCTCGAGCTCGAACGACTTCATGTATTAGAGGAC

Coding sequence (CDS)

ATGATGTCCAGATCCATGTTACTTGTGTTTTTGTTCGTTATTCTCATTATCACTTCGCAGTTCGAGTGGAGGCAACAACTAGTACCTGAGGTTGACTCCACGGTGAACTCCCAGAAGCAGCAGCAGCAGATATCAACGAGGGAAGAAGCAGTTAAGGAGAAGATATTGTTATCACAAGAAAGGAATATCCAGAGGCTCAATGAAGTTGTACGAAGCCTCCGACAACAGTTGCAGCAGTGTAGAGGCAGGAACATTACAAATGGTACAGCTCTACTGAGTGCACATATTCTCGAGCTCGAACGACTTCATGTATTAGAGGAC

Protein sequence

MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQERNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED
Homology
[Close]
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match: A0A0A0KEF2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425770 PE=4 SV=1)

HSP 1 Score: 191.0 bits (484), Expect = 2.5e-45
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE
Sbjct: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED
Sbjct: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 107

[Close]
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match: A0A5A7V382 (NAC domain-containing protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold212G00990 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVD+TVNSQKQQQQISTREEAVKEKILLSQE
Sbjct: 334 MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQQISTREEAVKEKILLSQE 393

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           RNIQRLNEVVRSLRQQLQQCRGRNITNGTALL+ HILELERLHVLED
Sbjct: 394 RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLTGHILELERLHVLED 440

[Close]
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match: A0A1S4DXM3 (NAC domain-containing protein 40 OS=Cucumis melo OX=3656 GN=LOC103491667 PE=4 SV=1)

HSP 1 Score: 187.2 bits (474), Expect = 3.6e-44
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVD+TVNSQKQQQQISTREEAVKEKILLSQE
Sbjct: 334 MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQQISTREEAVKEKILLSQE 393

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           RNIQRLNEVVRSLRQQLQQCRGRNITNGTALL+ HILELERLHVLED
Sbjct: 394 RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLTGHILELERLHVLED 440

[Close]
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match: A0A6J1J9H8 (uncharacterized protein LOC111483810 OS=Cucurbita maxima OX=3661 GN=LOC111483810 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEVD+ VNSQK QQQISTREEAVKEKILLSQER
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           NIQRLNEVVRSLR+QLQQCRGRNITNGTALLS HILELERLHVLED
Sbjct: 61  NIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERLHVLED 105

[Close]
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match: A0A6J1FY60 (uncharacterized protein LOC111448980 OS=Cucurbita moschata OX=3662 GN=LOC111448980 PE=4 SV=1)

HSP 1 Score: 176.4 bits (446), Expect = 6.3e-41
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEVD+ VNSQK QQQISTREEAVKEKILLSQER
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           NIQRLNEVVRSLR+QLQQCRGRNITNGTALLS HILELERLHVLED
Sbjct: 61  NIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERLHVLED 105

[Close]
BLAST of CSPI06G23330 vs. NCBI nr
Match: XP_031743166.1 (uncharacterized protein LOC116404563 [Cucumis sativus] >XP_031743167.1 uncharacterized protein LOC116404563 [Cucumis sativus] >KGN48040.1 hypothetical protein Csa_003587 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 5.1e-45
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE
Sbjct: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED
Sbjct: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 107

[Close]
BLAST of CSPI06G23330 vs. NCBI nr
Match: XP_016900731.1 (PREDICTED: NAC domain-containing protein 40 [Cucumis melo] >KAA0061724.1 NAC domain-containing protein 40 [Cucumis melo var. makuwa])

HSP 1 Score: 187.2 bits (474), Expect = 7.4e-44
Identity = 104/107 (97.20%), Postives = 106/107 (99.07%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVD+TVNSQKQQQQISTREEAVKEKILLSQE
Sbjct: 334 MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDTTVNSQKQQQQISTREEAVKEKILLSQE 393

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           RNIQRLNEVVRSLRQQLQQCRGRNITNGTALL+ HILELERLHVLED
Sbjct: 394 RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLTGHILELERLHVLED 440

[Close]
BLAST of CSPI06G23330 vs. NCBI nr
Match: XP_022944563.1 (uncharacterized protein LOC111448980 [Cucurbita moschata] >XP_022985896.1 uncharacterized protein LOC111483810 [Cucurbita maxima])

HSP 1 Score: 176.4 bits (446), Expect = 1.3e-40
Identity = 100/106 (94.34%), Postives = 103/106 (97.17%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEVD+ VNSQK QQQISTREEAVKEKILLSQER
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVDTRVNSQK-QQQISTREEAVKEKILLSQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           NIQRLNEVVRSLR+QLQQCRGRNITNGTALLS HILELERLHVLED
Sbjct: 61  NIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERLHVLED 105

[Close]
BLAST of CSPI06G23330 vs. NCBI nr
Match: XP_038902642.1 (uncharacterized protein LOC120089290 [Benincasa hispida])

HSP 1 Score: 175.3 bits (443), Expect = 2.9e-40
Identity = 102/109 (93.58%), Postives = 105/109 (96.33%), Query Frame = 0 

Query: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQE 60
           MMSRSMLLVFLFVILIITSQFEWRQQLVPEVD+T+NSQK QQQISTREEAVKEKILLSQE
Sbjct: 1   MMSRSMLLVFLFVILIITSQFEWRQQLVPEVDNTLNSQK-QQQISTREEAVKEKILLSQE 60

Query: 61  RNIQRLNEVVRSLRQQLQQCRGRNITNGTALLS--AHILELERLHVLED 108
           RNIQRLNEVVRSLR+QLQQCRGRNITNGTALLS   HILELERLHVLED
Sbjct: 61  RNIQRLNEVVRSLREQLQQCRGRNITNGTALLSGQGHILELERLHVLED 108

[Close]
BLAST of CSPI06G23330 vs. NCBI nr
Match: XP_023512164.1 (uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 173.7 bits (439), Expect = 8.5e-40
Identity = 99/106 (93.40%), Postives = 102/106 (96.23%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MSRSMLLVFLFVILIITSQFEW+QQLVPEV + VNSQK QQQISTREEAVKEKILLSQER
Sbjct: 1   MSRSMLLVFLFVILIITSQFEWKQQLVPEVHTRVNSQK-QQQISTREEAVKEKILLSQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHILELERLHVLED 108
           NIQRLNEVVRSLR+QLQQCRGRNITNGTALLS HILELERLHVLED
Sbjct: 61  NIQRLNEVVRSLREQLQQCRGRNITNGTALLSGHILELERLHVLED 105

[Close]
BLAST of CSPI06G23330 vs. TAIR 10
Match: AT5G22280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-23
Identity = 63/109 (57.80%), Postives = 85/109 (77.98%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MSR ++LVFL VILI+TSQFEWRQ L+ E+D+  +  ++ QQI+ REEAVKEKI+LSQER
Sbjct: 1   MSRPIMLVFLLVILIVTSQFEWRQPLL-ELDAAPSLSQKHQQIAKREEAVKEKIILSQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNG---TALLSAHILELERLHVLED 108
           +IQRLN++VRSL+ QLQ+C+G N T     T+  +   +ELER H++ED
Sbjct: 61  HIQRLNDLVRSLQMQLQRCKGENETRNATETSHNNKQFIELERKHIVED 108

[Close]
BLAST of CSPI06G23330 vs. TAIR 10
Match: AT3G44280.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G22280.1); Has 82 Blast hits to 82 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 103.2 bits (256), Expect = 1.3e-22
Identity = 67/109 (61.47%), Postives = 84/109 (77.06%), Query Frame = 0 

Query: 2   MSRSMLLVFLFVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQER 61
           MS+ +LLV L VILI+TSQFEWRQ LV E+D+  +S ++QQQIS REEAVKEKI++SQER
Sbjct: 1   MSKPVLLVCLLVILIVTSQFEWRQPLV-ELDTATSSSQKQQQISDREEAVKEKIIISQER 60

Query: 62  NIQRLNEVVRSLRQQLQQCRGRNITNGTALLSAHI----LELERLHVLE 107
           +IQRLNE+VRSL+ QL QC+G N T   A  S HI    +E+ER  +LE
Sbjct: 61  HIQRLNELVRSLQLQLLQCKGENETQ-NATKSYHINKQFIEVERKQILE 107

[Close]
BLAST of CSPI06G23330 vs. TAIR 10
Match: AT5G22280.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G44280.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 85.9 bits (211), Expect = 2.2e-17
Identity = 51/99 (51.52%), Postives = 71/99 (71.72%), Query Frame = 0 

Query: 12  FVILIITSQFEWRQQLVPEVDSTVNSQKQQQQISTREEAVKEKILLSQERNIQRLNEVVR 71
           F   +I   FEWRQ L+ E+D+  +  ++ QQI+ REEAVKEKI+LSQER+IQRLN++VR
Sbjct: 3   FDFTVINRSFEWRQPLL-ELDAAPSLSQKHQQIAKREEAVKEKIILSQERHIQRLNDLVR 62

Query: 72  SLRQQLQQCRGRNITNG---TALLSAHILELERLHVLED 108
           SL+ QLQ+C+G N T     T+  +   +ELER H++ED
Sbjct: 63  SLQMQLQRCKGENETRNATETSHNNKQFIELERKHIVED 100

[Close]
BLAST of CSPI06G23330 vs. TAIR 10
Match: AT5G06265.1 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11
Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 2  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDST----VNSQKQQQQISTREEAVKEKILL 61
          M+RS +L+F+ + +++TSQFEW +Q+  E +++    + S K+QQ I   +E+V+ K +L
Sbjct: 1  MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKIL 60

Query: 62 SQERNIQRLNEVVRSLRQQLQQCRGRNITNGTAL 92
           QE+ IQ+LNE+VR LR+QL QCR  N    T L
Sbjct: 61 FQEKKIQKLNELVRDLRRQLLQCRNENQVELTEL 94

[Close]
BLAST of CSPI06G23330 vs. TAIR 10
Match: AT5G06265.2 (hyaluronan mediated motility receptor-related )

HSP 1 Score: 67.0 bits (162), Expect = 1.0e-11
Identity = 41/94 (43.62%), Postives = 64/94 (68.09%), Query Frame = 0 

Query: 2  MSRSMLLVFLFVILIITSQFEWRQQLVPEVDST----VNSQKQQQQISTREEAVKEKILL 61
          M+RS +L+F+ + +++TSQFEW +Q+  E +++    + S K+QQ I   +E+V+ K +L
Sbjct: 1  MTRSWVLLFVLMFIVLTSQFEWNEQVENESETSSRPLILSDKEQQHIPQGKESVQVKKIL 60

Query: 62 SQERNIQRLNEVVRSLRQQLQQCRGRNITNGTAL 92
           QE+ IQ+LNE+VR LR+QL QCR  N    T L
Sbjct: 61 FQEKKIQKLNELVRDLRRQLLQCRNENQVELTEL 94

The following BLAST results are available for this feature:
BLAST of CSPI06G23330 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G23330 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KEF22.5e-45100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425770 PE=4 SV=1[more]
A0A5A7V3823.6e-4497.20NAC domain-containing protein 40 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... [more]
A0A1S4DXM33.6e-4497.20NAC domain-containing protein 40 OS=Cucumis melo OX=3656 GN=LOC103491667 PE=4 SV... [more]
A0A6J1J9H86.3e-4194.34uncharacterized protein LOC111483810 OS=Cucurbita maxima OX=3661 GN=LOC111483810... [more]
A0A6J1FY606.3e-4194.34uncharacterized protein LOC111448980 OS=Cucurbita moschata OX=3662 GN=LOC1114489... [more]
BLAST of CSPI06G23330 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_031743166.15.1e-45100.00uncharacterized protein LOC116404563 [Cucumis sativus] >XP_031743167.1 uncharact... [more]
XP_016900731.17.4e-4497.20PREDICTED: NAC domain-containing protein 40 [Cucumis melo] >KAA0061724.1 NAC dom... [more]
XP_022944563.11.3e-4094.34uncharacterized protein LOC111448980 [Cucurbita moschata] >XP_022985896.1 unchar... [more]
XP_038902642.12.9e-4093.58uncharacterized protein LOC120089290 [Benincasa hispida][more]
XP_023512164.18.5e-4093.40uncharacterized protein LOC111776968 [Cucurbita pepo subsp. pepo][more]
BLAST of CSPI06G23330 vs. TAIR 10
Match NameE-valueIdentityDescription
AT5G22280.11.6e-2357.80unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT3G44280.11.3e-2261.47unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G22280.22.2e-1751.52unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G06265.11.0e-1143.62hyaluronan mediated motility receptor-related [more]
AT5G06265.21.0e-1143.62hyaluronan mediated motility receptor-related [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 56..83
NoneNo IPR availablePANTHERPTHR34564PEPTIDYL-PROLYL CIS-TRANS ISOMERASE Gcoord: 1..107

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G23330.1CSPI06G23330.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006355 regulation of transcription, DNA-templated
cellular_component GO:0016021 integral component of membrane
molecular_function GO:0003677 DNA binding
molecular_function GO:0016853 isomerase activity
molecular_function GO:0016491 oxidoreductase activity