CSPI06G23250 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G23250
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	heterogeneous nuclear ribonucleoprotein Q-like
Location	Chr6: 20962029 .. 20968100 (+)
RNA-Seq Expression	CSPI06G23250
Synteny	CSPI06G23250

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GGCCTATCCCCACAATAGCATGGAGCCCCAAAATCTCCCTTGAAGAAGGAGTCTAGGGTTCGTTCTTCATATTTTCTACGATTCTTCATTTCAAGCTCTCAATTTCGGCAGACTTTCTCTTAGTAATTTCGCTTAATCTTTCACAGAGAGCATCTTTGGTACACTTTTGCTCCTTATCTCATCGTTTATGTCTTTCTTCAATCTATCTTTTTTCTCCACTCTTCTCATGCGCGCTCTACTGTTTTCTTTCTTTTGCGACTCTCTCTATTTCGCTGCCCCTCGCGTTGTTTGAAGTCTAAACTTGCACCTTTTTTCTTCTCTACCCTGCATTTTATGACCCTTACACGGGTGGAATATTATTGGAATACTTATTCAAGAAATGTCAAATTTGGGGTTATAATCTAATGGCTAATGGTGGTTTTTCTTTTATGGAATAACTAATAAGAATGCTCTTTGGAAAAGTGAAGGCAAATCATCTGCGGAATTAGTGGGGTTTTAGCTTGGATTATTGTCCAACTGTTTAATATCGGAGACTTACAAAATTTAACATTTTAACGAGAAGATAGATTATATTCTGCATGACTCCTTGAGGTTTGATACAATATATTGTATGTTAGATGTAAGATACTAGTGTGAGAAATTGGCGTTTGTGGGTTTTGGCTCTTTCTTCAACTTGGGTAATTTCAGGTCTTCAAACCATGATATTTTGATTTTTGTAACTAACTAATTCCAAGATTGTTTTGGGTTTAACTGGCAAGCAAATTACTTCACCATGGATGAATTTTTTTCGTCCATTGGTAAGGGTGATAGAAAAATATATAAAACAAAAGAAACATCCATGGCTGATAAGTGTTTTAGCACAGAGAAAGTATAATACCATCTTCCCCGCCCATACAACTGAAGCAAATAGGAACTATAGATGTCAAATTTCTGTCCATGGAAGTCAAATTCTAACGTCGTTTACAATGCTCCCATGGAAAGGTAGTCTTTTGACGAAATGTCCTAAGTCTGTGTCACAAAGTTTGTTATAACTTAATTGTATTTGTTATAGCGTCTATGTAAAATATTTTAATCATGTCCAGTGCCCAAATGGAGGTTTTGCAAGACATGGGGGGGGTATAGTTCCTATTTATTTAGTCTACACTACGTTCTTTTGCAAGACATGGGGGGTGGCGGTGTTCATAGCGCACCTCCTATGAAGGTCAGCTTTCATTGAGAAAAATGGAGGTTTGTGTAGGTTGGATGCCTAGACAATCCACGAGGGGGTTCTATCCCTTTAATTGCTGAGAATCAACTGGGAGGGGAAATACTGTTGTGAATAAATGCCTCCATTTGTTTTGCTGGAAAACTTTAGGGTTGCTCCATTTGTATTGATTACTGATTTTAGATGTTTGCTTCTTTTTGCTACTTATTTAGTTTTTACCAACTCAAAGTACTCTGTTTAAGTAAGATGAGTATTTGAAAGAAACTTATGTGTGGCTTATGAGATAAAGCTGAATGAGGGGCCTTTGTATCTGATGTTATTTAATGTTTGTTATGATGGCCTGGACGATATTCCCCCATCTGAGCACAATTTCTTTATTCTTTGCAGGGGTTACACAGATTGGTATGTTGTTTGGAACTGGTATATGTTTTTGTGAGATGGACAAAATTGATTCTCCATTTGTAGCAGCAGTCTCATTCCTTTTTTGTCTAAACCTTTTATATCAAAATTGTTCCATTGGATCTCATATGCTACTTTGTGTGGCATTGTTATGTCCTTGCATTAAAGTAAAGTATTCAATTGTCTCCATAATTTATTCTGCTGTCATTAACATTAGTTTCGTGAGATATTCAGAAAATGATACCCCTTGAAAAAAGATGTAGAAAGCTAATTTGTCAAAAGAATTTTTTGGTATTGCAATCATTCTGATTTCAAGACATTCATATCTTTATGTTGTTTTGCACCACCTCCGTAATTCTCATTGTAGTCACTGAGAGACTCATTAACCGGTCTTTTTCACGCAACTTGTGTTATAAACATTAGCCCTCTAGAAAAGAAGTCTTTCATATTTCAATCCCCTTGAGTCTATTCTCATGACAACTTTTCATTTCAGCTTCATATTTTTCTTCTCCATTTGGCCTTTCTTTTTGTTTCCTCCTCTCAGTAATTTTTTTATATCTCCCCATGAATTCTTCTGGCCTCTGTGCCTTCTTCACAGTTACTTTGCAAGCTTGTTTAATTAAATAAGATGCCAAGGGGAAAGGGGAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAACCTGAAAAGCCAGGTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTATGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAGGAAGAGGAGGAAGAGGAGGAGGATGAGGAGGAAGGTGATGAAGAAGATGTTGAAGAAGTGGAGGATGATGGAACTAATGACAATGGAATTAATTCCCAAAATGAAACTATTAATGATGAGGATGAAACGAAGAAACACGCCGAGCTTCTCGCTCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCAAGATTCTTCTGAAGACGATTTGAGGAGATTTTGTGAATCAATAGGAGAAGTAACAGAGGTAAGCTCAGTTATATTTATTCTACAAACAGATATGGGCTTTTCACAGGGACTAATAGAATTCTGTTGTGACCAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAACAAGGGTTTTGCATTTGTTACCTTCAGAAGTGTAGAGCTGGCTTCAAAAGCAATCGATGAGCTGAATAACACCGAATTCAAGGTTTTCCTTTTTACTTTTGTTTGTAGTCTGCCCATTAGTAAGTTGATCGATTAAGTGCAAAGTTGGAAGCTAACGTTGAAACTTTGTAAATCCTTTGAATTTTTTTAGAATCTTCCATGCCCCTTCTTCCTAATATCAAATTTTCAGTATTTTCATCACCTGTTTCTCTGTGTGACATAGGGTAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTTATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAAGAAGGTCGTGACAGAAATTGGACCTGGTGTTACTGCTGTGGAACTTGTAAAGGTTAGCATGACATAAATTTCATGTTGGATCTTGCTACATCTGTACAATGCTATATTCTTACTCCATAATTGTACTACTTTTCCTTTTCCATAGACATAATAAAAATTTTGTGCAACATAAACTGCTGCCTAGTTTCGTAATTTGATTTTATACAATTTTTGGTTGCAGGATATGAAGAATACTAGTAATAACAGGGGTTTTGCTTTTATTGATTACTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGACAATGCTCCAACTGTTAGCTGGGCAGATCCTAAAAATGCTGATTCATCTGCTGCGTCACAGGTCTGGTTCATTGCTTCCAAGTGTACAATAATTTTTTCATATATATTATTGTAGCTACTGAGTTGTATGTAATTATTTATAACTTATAAGCTCCTAATGGTTATGGACTATCAAATACAGTATATTTGTTCAAGAGATCATTAATTGTGACAACTCTCATCTGTATGTAAGTTCATCGATAAGCAAATTCCAAAATGGTCAACTTATTTATTTACTATTATTATTGTTATTTAATATTTATATAGAGTGTTTGTAGTGTAACAACTAACTTTGTAGGTTCGTTGAGGCAGTTGCCCCATTTTTCTTTCCTGATAAACATAATGACTACTGTAAAATTTGACGTCATAAATCGTCCTTTGCACCGGATAGTTGGTTTATGTATCTATGGCTTTTTGTTGATTATTGACTGAAGATGGGGCTTGTTAAGTTTTGTTTTGTTTAACTTCAAGCTTTATCTTTAACTCAACAATGGATTTTTCCCTCTTTTTTGGTCGATACAGGTGAAGGCAGTTTATGTCAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTATTTGACCATCATGGGAAAATTACAAAAGTGGTTTTACCTCCTGCAAAATCTGGACAAGAAAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCTAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTGAGCATTTCTCCAGAAGCTTTTCTAAAAAAATTTCATTTTTCCCTCAGCTGGTCTTTGATATCCACTTCTTTATGCTTATATATTAGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGATCAGAAATCTGGAGGATCAAATAGTCAGAAATCTGGATTGCTTCCTAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTGCTGTAAATGCAGGATATGGTGGTTCTGGTTTTGGTCAGGTAAAATGATTGTGCACTGGATTGATCGAAAGAAAAAAGTGTTTAAAAAAACTCATTTTTATTTAAACACTTTTGATAAAAACAGTTTAAAATGCTCTTTAGCTTTTAAATGGCTGCCAAACACTTCAATTTTTTTTCAAAATGACATTTTTTAAATTCAACACTTGAAAGTGTGTTCCAAACACACCCTGAACTCGGTATGCTCATGTCTTGATAAGATCAACCTATCCATCTTCTTTTAATCCCTTCGCGTGGCTAGTTGGTCAAGTGTATTGGCTAGTTGGCTGAGCGACGGTTATTATTGGAGCTCAGGAGAATTCAATGGTTTTGTGAATGAATGTTGGTTGCGAATGCAAGGATACAATCCAACAGAACTGGATTTGATCCTTCTAGTTTAGTGGGAGGAACCATTTGATGTTCTTAAATTATTCGAACTGGAATTTTTGTGGCTTTCTTTTAATCTGTTGGTTTTGAGATTATCATTCTTATAGTCTCTTCCCTTCAGAGATTTGGAAAAAATACCTTACTTCAATCTGTATTTGTACACGTTTATCATCTTGATAACTTTTCCTTAGCTAAAATTAGTCTGATTTTGCTGTTGCATTTGCTTCCGTGCCTTGGATATATGATTTAAAGTATCTTTTACTTTTGTATGTAGAAACAAAAAATCTGATTGAATTGATTTAAGTTGCAGCCATTGATATATGGAAGAGGACCAACGCCTGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGTAAGTTCGTGCTTCTTTTTCTACATTTTCCACCTATATTATACCTGACTGTAGTGGACAATTCTTTCATTCGTTTTACTCCCGAGAGTTTCTGAAGCTTAGGGATGTAAATTCTGTTAAAGAAGTTCTAGCTTATACAGTTTGCCTTTTGTTTTGAAGCTTCTGTCCAATTCATTTCTCTAGTTGAAGCTATTTGAAAACTACAATCCATCCATCTTAGAGTAAATTGCCGCATCTAATACTTTAGCTTCTGCTCTGATGGCTCATGCTGAAAGCTGCTTCCTATCTTCTTGCAGGCAACAACCAGGATCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGTGGCGGCGGCAGTGGAGGCAGTGGTGGCGGAAGTGGCAGTAAGAACGGCGGCAGTTCTAGTAGGGGGAGACATTCACATGACAGTGGCCATGGTGGTGGTCATGGTGGCCATGGTCGCAGATATCGCCCATATTAGTTCTTGTCAAATGTTCTGCCGTGGAACAAACAAGAAGGTTTCGGCCGGAGGTGCCACCCCCTCTACCTAACATCTCGTGACCAGAGATTCTTGAGTATTGATAAAAGTGGAAGCTAGCTAATTTATGGGCTTTGTAATGTGTTTGTTAGTTTTTATCAATATTTACTTTAGGTTACATTTCAAATTAATTAATGTGTTTTGCCCCGGTTTTGTTCTTTTTCCATCCTACTTTTAAACAAGAAATACGTTTATCTCTTCTGTGGTAAAAATGATCTCAAATTTGAGAATGTGTATTGG

mRNA sequence

GGCCTATCCCCACAATAGCATGGAGCCCCAAAATCTCCCTTGAAGAAGGAGTCTAGGGTTCGTTCTTCATATTTTCTACGATTCTTCATTTCAAGCTCTCAATTTCGGCAGACTTTCTCTTAGTAATTTCGCTTAATCTTTCACAGAGAGCATCTTTGTTACTTTGCAAGCTTGTTTAATTAAATAAGATGCCAAGGGGAAAGGGGAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAACCTGAAAAGCCAGGTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTATGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAGGAAGAGGAGGAAGAGGAGGAGGATGAGGAGGAAGGTGATGAAGAAGATGTTGAAGAAGTGGAGGATGATGGAACTAATGACAATGGAATTAATTCCCAAAATGAAACTATTAATGATGAGGATGAAACGAAGAAACACGCCGAGCTTCTCGCTCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCAAGATTCTTCTGAAGACGATTTGAGGAGATTTTGTGAATCAATAGGAGAAGTAACAGAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAACAAGGGTTTTGCATTTGTTACCTTCAGAAGTGTAGAGCTGGCTTCAAAAGCAATCGATGAGCTGAATAACACCGAATTCAAGGGTAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTTATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAAGAAGGTCGTGACAGAAATTGGACCTGGTGTTACTGCTGTGGAACTTGTAAAGGATATGAAGAATACTAGTAATAACAGGGGTTTTGCTTTTATTGATTACTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGACAATGCTCCAACTGTTAGCTGGGCAGATCCTAAAAATGCTGATTCATCTGCTGCGTCACAGGTGAAGGCAGTTTATGTCAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTATTTGACCATCATGGGAAAATTACAAAAGTGGTTTTACCTCCTGCAAAATCTGGACAAGAAAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCTAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGATCAGAAATCTGGAGGATCAAATAGTCAGAAATCTGGATTGCTTCCTAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTGCTGTAAATGCAGGATATGGTGGTTCTGGTTTTGGTCAGCCATTGATATATGGAAGAGGACCAACGCCTGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGATCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGTGGCGGCGGCAGTGGAGGCAGTGGTGGCGGAAGTGGCAGTAAGAACGGCGGCAGTTCTAGTAGGGGGAGACATTCACATGACAGTGGCCATGGTGGTGGTCATGGTGGCCATGGTCGCAGATATCGCCCATATTAGTTCTTGTCAAATGTTCTGCCGTGGAACAAACAAGAAGGTTTCGGCCGGAGGTGCCACCCCCTCTACCTAACATCTCGTGACCAGAGATTCTTGAGTATTGATAAAAGTGGAAGCTAGCTAATTTATGGGCTTTGTAATGTGTTTGTTAGTTTTTATCAATATTTACTTTAGGTTACATTTCAAATTAATTAATGTGTTTTGCCCCGGTTTTGTTCTTTTTCCATCCTACTTTTAAACAAGAAATACGTTTATCTCTTCTGTGGTAAAAATGATCTCAAATTTGAGAATGTGTATTGG

Coding sequence (CDS)

ATGCCAAGGGGAAAGGGGAATGCTTCATCTACTGCTAGGCCAGTTGAACCTGAAAAGCAGAATGAACCTGAAAAGCCAGGTGACTCTGATGAGAGGGTAGATCTTGATGTTGATAATGATCCTGAGGAGGTAATGGAAGAAGATGTTGAGTATGAAGAAGTAGAAGAGGAGGAGGAGGTGGAAGAAATAGAAGAAGTTGAGGAAGAGGAGGAAGAGGAGGAGGATGAGGAGGAAGGTGATGAAGAAGATGTTGAAGAAGTGGAGGATGATGGAACTAATGACAATGGAATTAATTCCCAAAATGAAACTATTAATGATGAGGATGAAACGAAGAAACACGCCGAGCTTCTCGCTCTACCTCCTCATGGTTCTGAAGTATATGTTGGTGGTATTCCTCAAGATTCTTCTGAAGACGATTTGAGGAGATTTTGTGAATCAATAGGAGAAGTAACAGAGGTTCGCGTTATGAGAAGTAAAGAATCAAATGAGAACAAGGGTTTTGCATTTGTTACCTTCAGAAGTGTAGAGCTGGCTTCAAAAGCAATCGATGAGCTGAATAACACCGAATTCAAGGGTAAGAAGATAAAATGTTCATCATCTCAAGCAAAGCACCGTTTGTTTATCGGTAATGTTCCCAGGAGCTGGGGTGAGGAAGATCTTAAGAAGGTCGTGACAGAAATTGGACCTGGTGTTACTGCTGTGGAACTTGTAAAGGATATGAAGAATACTAGTAATAACAGGGGTTTTGCTTTTATTGATTACTATAATCATGCATGTGCTGAGTACTCAAGGCAGAAGATGATGAACCCAAAATTTAAGCTAGATGACAATGCTCCAACTGTTAGCTGGGCAGATCCTAAAAATGCTGATTCATCTGCTGCGTCACAGGTGAAGGCAGTTTATGTCAAGAATTTGCCAAAGAATGTAACACAGGAGCAGTTGAAAAAGCTATTTGACCATCATGGGAAAATTACAAAAGTGGTTTTACCTCCTGCAAAATCTGGACAAGAAAAGAATAGAATTGGTTTTGTACATTTTTCGGAGAGGTCTAGTGCTATGAAGGCTTTAAAAAATACTGAAAAATATGAATTGGATGGTCAAGTTTTGGAGTGTTCTCTTGCAAAGCCACAGGCAGATCAGAAATCTGGAGGATCAAATAGTCAGAAATCTGGATTGCTTCCTAACTATCCACCTCGTGTTGGATATGGCTTTGTTGGGGGTGCTTATGGTGCTGTAAATGCAGGATATGGTGGTTCTGGTTTTGGTCAGCCATTGATATATGGAAGAGGACCAACGCCTGCTGGCATGGCAATGATGCCAATGTTGCTACCTGATGGACGGATTGGCTATGTCTTGCAACAACCAGGATCACAAATGCTAACCCCTCCACCACATCCAAGAAGTGGTGGCGGCGGCAGTGGAGGCAGTGGTGGCGGAAGTGGCAGTAAGAACGGCGGCAGTTCTAGTAGGGGGAGACATTCACATGACAGTGGCCATGGTGGTGGTCATGGTGGCCATGGTCGCAGATATCGCCCATATTAG

Protein sequence

MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY*

Homology

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BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot
Match: Q9ASP6 (Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF2 PE=1 SV=1)

HSP 1 Score: 416.4 bits (1069), Expect = 4.7e-115
Identity = 258/518 (49.81%), Postives = 350/518 (67.57%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEE--------- 87
           D+D+RVD            E+  Y E+E+E E E++EE EEEEEE++D+++         
Sbjct: 6   DNDDRVDF-----------EEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEER 65

Query: 88  ----------GDEEDV-EEVEDDGTNDNGINSQNE------TINDEDETKKHAELLALPP 147
                     GD EDV EE+ +D  N   I + ++       I+DED  +K++ LL+LPP
Sbjct: 66  EVEDYGDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDR-EKYSHLLSLPP 125

Query: 148 HGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASKA 207
           HGSEV++GG+P+D  E+DLR  CE IGE+ EVR+M+ ++S ++KG+AFV F++ ++A KA
Sbjct: 126 HGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKA 185

Query: 208 IDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMK 267
           I+EL++ EFKGK I+CS S+ K+RLFIGN+P++W E++ +KV+ ++GPGV  +EL+KD  
Sbjct: 186 IEELHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPT 245

Query: 268 NTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKA 327
           NT+ NRGFAF+ YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA
Sbjct: 246 NTTRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKA 305

Query: 328 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 387
           +YVKN+P+N + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+T
Sbjct: 306 LYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDT 365

Query: 388 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNAGY 447
           E+YE++GQ LE  LAKPQA++K   S S   G  P   P V     GF    YGA+ AG 
Sbjct: 366 ERYEVNGQPLEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGL 425

Query: 448 GGSG-FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGG 507
           G +G F QP+IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP        + G
Sbjct: 426 GIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNG 485

Query: 508 SGGGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           S GGSG  N        H HD   G      GRRYRPY
Sbjct: 486 SSGGSGRDNS-------HEHDGNRG------GRRYRPY 495

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BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot
Match: O43390 (Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1 SV=1)

HSP 1 Score: 153.3 bits (386), Expect = 7.5e-36
Identity = 131/432 (30.32%), Postives = 206/432 (47.69%), Query Frame = 0


Query: 120 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 179
           P  G+EV+VG IP+D  ED+L    E  G + ++R+M    S +N+G+AF+TF   E A 
Sbjct: 161 PGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLSGQNRGYAFITFCGKEAAQ 220

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVK 239
           +A+   ++ E + GK +    S A +RLF+G++P++  +E++ +  +++  G+  V L  
Sbjct: 221 EAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENILEEFSKVTEGLVDVILYH 280

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP +  D    ++V
Sbjct: 281 QPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVTVEWADPVEEPDPEVMAKV 340

Query: 300 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L+K F   GK+ +V        ++     FVHF +R +A+KA+ 
Sbjct: 341 KVLFVRNLATTVTEEILEKSFSEFGKLERV--------KKLKDYAFVHFEDRGAAVKAMD 400

Query: 360 NTEKYELDGQVLECSLAKP---QADQKSGGSNSQKSGLLPNY----PPRV---------- 419
                E++G+ +E  LAKP   +  ++     + +S    +Y    PPR+          
Sbjct: 401 EMNGKEIEGEEIEIVLAKPPDKKRKERQAARQASRSTAYEDYYYHPPPRMPPPIRGRGRG 460

Query: 420 ----GYGFVGGAYG--------------AVNAGYGGSGFGQP---LIYGRG--------- 479
               GYG+    YG                  GY    +G      + GRG         
Sbjct: 461 GGRGGYGYPPDYYGYEDYYDDYYGYDYHDYRGGYEDPYYGYDDGYAVRGRGGGRGGRGAP 520

Query: 480 PTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGSGSKNGGSSSR 503
           P P G    P   P GR GY      SQ   P   PR    GS G  GG   +  G  SR
Sbjct: 521 PPPRGRGAPP---PRGRAGY------SQRGAPLGPPR----GSRGGRGGPAQQQRGRGSR 571

[Close]

BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot
Match: O60506 (Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=1 SV=2)

HSP 1 Score: 147.1 bits (370), Expect = 5.4e-34
Identity = 133/421 (31.59%), Postives = 203/421 (48.22%), Query Frame = 0


Query: 120 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 179
           P  G+E++VG IP+D  ED+L    E  G + ++R+M    +  N+G+AFVTF + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  +++  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 300 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKAFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 420 --RVGYGFVGGAYGAVN----AGYG----GSGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 480 GYVLQQPGSQMLTPPPHPRSG---GGGSGGSGGGSGSKNGGSSSRGRHSHDSGHGGGHGG 507
           G     P       PP  R+G    GG G + G  G++ G    RGR     G  GG GG
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVR--GARGGRGG 560

[Close]

BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot
Match: Q7TMK9 (Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE=1 SV=2)

HSP 1 Score: 146.7 bits (369), Expect = 7.0e-34
Identity = 133/421 (31.59%), Postives = 203/421 (48.22%), Query Frame = 0


Query: 120 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 179
           P  G+E++VG IP+D  ED+L    E  G + ++R+M    +  N+G+AFVTF + E A 
Sbjct: 158 PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 217

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  +++  G+T V L  
Sbjct: 218 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 277

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 278 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 337

Query: 300 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 338 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 397

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 398 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 457

Query: 420 --RVGYGFVGGAYGAVN----AGYG----GSGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 458 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 517

Query: 480 GYVLQQPGSQMLTPPPHPRSG---GGGSGGSGGGSGSKNGGSSSRGRHSHDSGHGGGHGG 507
           G     P       PP  R+G    GG G + G  G++ G    RGR     G  GG GG
Sbjct: 518 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVR--GARGGRGG 560

[Close]

BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot
Match: Q7TP47 (Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncrip PE=2 SV=1)

HSP 1 Score: 146.7 bits (369), Expect = 7.0e-34
Identity = 133/421 (31.59%), Postives = 203/421 (48.22%), Query Frame = 0


Query: 120 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 179
           P  G+E++VG IP+D  ED+L    E  G + ++R+M    +  N+G+AFVTF + E A 
Sbjct: 68  PSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQ 127

Query: 180 KAIDELNNTEFK-GKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVK 239
           +A+   NN E + GK I    S A +RLF+G++P+S  +E + +  +++  G+T V L  
Sbjct: 128 EAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYH 187

Query: 240 DMKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADP-KNADSSAASQV 299
              +   NRGF F++Y +H  A  +R+++M+ K K+  N  TV WADP ++ D    ++V
Sbjct: 188 QPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKV 247

Query: 300 KAVYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALK 359
           K ++V+NL   VT+E L+K F   GK+ +V        ++     F+HF ER  A+KA++
Sbjct: 248 KVLFVRNLANTVTEEILEKSFSQFGKLERV--------KKLKDYAFIHFDERDGAVKAME 307

Query: 360 NTEKYELDGQVLECSLAKPQADQKSGGSNSQKSGLL------------PNYPP------- 419
                +L+G+ +E   AKP  DQK     +Q+                P+ PP       
Sbjct: 308 EMNGKDLEGENIEIVFAKP-PDQKRKERKAQRQAAKNQMYDDYYYYGPPHMPPPTRGRGR 367

Query: 420 --RVGYGFVGGAYGAVN----AGYG----GSGFGQPLIYGRGPTPAGMAMMPMLLPDGRI 479
             R GYG+    YG  +     GY       G+  P  YG      G          G  
Sbjct: 368 GGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDP-YYGYEDFQVGAR------GRGGR 427

Query: 480 GYVLQQPGSQMLTPPPHPRSG---GGGSGGSGGGSGSKNGGSSSRGRHSHDSGHGGGHGG 507
           G     P       PP  R+G    GG G + G  G++ G    RGR     G  GG GG
Sbjct: 428 GARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGRGVR--GARGGRGG 470

[Close]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL
Match: A0A0A0KI54 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1)

HSP 1 Score: 958.0 bits (2475), Expect = 1.6e-275
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY
Sbjct: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 513

[Close]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL
Match: A0A1S3BMC2 (nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.5e-268
Identity = 506/517 (97.87%), Postives = 508/517 (98.26%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIEEVEEEEEEEE+EEEGDEEDVEEVEDDGTN+NGIN QNETINDEDE KKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEEEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYG SG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG GGSGGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG-GGSGGGS 480

Query: 481 GSKNGGSSSRGRHSHDS----GHGGGHGGHGRRYRPY 514
           GSKN GSSSRGRHSHDS    GHGGGHGGHGRRYRPY
Sbjct: 481 GSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL
Match: A0A6J1FY14 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111448867 PE=4 SV=1)

HSP 1 Score: 859.0 bits (2218), Expect = 1.0e-245
Identity = 468/513 (91.23%), Postives = 481/513 (93.76%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIE   EEEEEEE+EEEG+EEDVEEVEDDG NDN IN QNE  NDEDE KKHAELLALP
Sbjct: 61  EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIP DSSE+DLR+FCE IGEVTEVRVMRSKESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYG SG
Sbjct: 361 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR     SGG+GGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR-----SGGNGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRH+HD      +  HGRRYRPY
Sbjct: 481 GSKNGGSSSRGRHTHD------NSSHGRRYRPY 500

[Close]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL
Match: A0A6J1J6P3 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LOC111483958 PE=4 SV=1)

HSP 1 Score: 858.2 bits (2216), Expect = 1.7e-245
Identity = 466/513 (90.84%), Postives = 481/513 (93.76%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIE   EEEEEEE+EEEG+EEDVEEVEDDG NDN IN QNE  NDEDE KKHAELL+LP
Sbjct: 61  EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLSLP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIP DSSE+DLR FCE IGEVTEVR+MR+KESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPHDSSEEDLRHFCEPIGEVTEVRIMRNKESNENKGFAFVTYRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYG SG
Sbjct: 361 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR     SGG+GGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR-----SGGNGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRH+HD      +  HGRRYRPY
Sbjct: 481 GSKNGGSSSRGRHTHD------NSSHGRRYRPY 500

[Close]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL
Match: A0A6J1H0I9 (heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=LOC111459318 PE=4 SV=1)

HSP 1 Score: 856.7 bits (2212), Expect = 5.1e-245
Identity = 468/515 (90.87%), Postives = 485/515 (94.17%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEE-DEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLAL 120
           EEIEEVEEEEEEEE +EEE +EEDVE VED G NDNGIN+QNE   DEDE KKH ELLAL
Sbjct: 61  EEIEEVEEEEEEEEVEEEEVEEEDVEGVEDGGNNDNGINAQNENGIDEDEKKKHDELLAL 120

Query: 121 PPHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELAS 180
           PPHGSEVY+GGIPQD+SE+DLR FC SIGEVTEVR+M+SK+SNENKGFAFVT++SVELAS
Sbjct: 121 PPHGSEVYIGGIPQDTSEEDLRSFCVSIGEVTEVRIMKSKDSNENKGFAFVTYKSVELAS 180

Query: 181 KAIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKD 240
           KAID LNNTEFKGKKIKCSSSQAKHRLF+GNVPRSWGEEDL+KVV +IGPGVTAVELVKD
Sbjct: 181 KAIDGLNNTEFKGKKIKCSSSQAKHRLFMGNVPRSWGEEDLRKVVMDIGPGVTAVELVKD 240

Query: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300
           MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA
Sbjct: 241 MKNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKA 300

Query: 301 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360
           VYVKNLPK VTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT
Sbjct: 301 VYVKNLPKTVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 360

Query: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGS 420
           EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVN GYG S
Sbjct: 361 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNPGYGAS 420

Query: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGG 480
           GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQM+TPPPHPRSGGG   GSGGG
Sbjct: 421 GFGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMMTPPPHPRSGGGSGSGSGGG 480

Query: 481 SGSKNGGSSSR-GRHSHDSGHGGGHGGHGRRYRPY 514
           SGSK+GGSSSR GRH+HDS       GHGRRYRPY
Sbjct: 481 SGSKSGGSSSRGGRHTHDS-------GHGRRYRPY 508

[Close]

BLAST of CSPI06G23250 vs. NCBI nr
Match: XP_031744156.1 (heterogeneous nuclear ribonucleoprotein Q [Cucumis sativus] >KGN48032.1 hypothetical protein Csa_003161 [Cucumis sativus])

HSP 1 Score: 958.0 bits (2475), Expect = 3.3e-275
Identity = 513/513 (100.00%), Postives = 513/513 (100.00%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY
Sbjct: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 513

[Close]

BLAST of CSPI06G23250 vs. NCBI nr
Match: XP_008449579.1 (PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumis melo])

HSP 1 Score: 934.1 bits (2413), Expect = 5.2e-268
Identity = 506/517 (97.87%), Postives = 508/517 (98.26%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIEEVEEEEEEEE+EEEGDEEDVEEVEDDGTN+NGIN QNETINDEDE KKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEEEEEGDEEDVEEVEDDGTNENGINVQNETINDEDEKKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYG SG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG GGSGGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG-GGSGGGS 480

Query: 481 GSKNGGSSSRGRHSHDS----GHGGGHGGHGRRYRPY 514
           GSKN GSSSRGRHSHDS    GHGGGHGGHGRRYRPY
Sbjct: 481 GSKNSGSSSRGRHSHDSGHGGGHGGGHGGHGRRYRPY 516

[Close]

BLAST of CSPI06G23250 vs. NCBI nr
Match: XP_038902706.1 (heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902708.1 heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida])

HSP 1 Score: 918.3 bits (2372), Expect = 2.9e-263
Identity = 491/513 (95.71%), Postives = 503/513 (98.05%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDL+VDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLEVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIEEVEEEEEEEE+EEEG+EEDVEEVEDDGTN+NGIN+QNE  NDEDE KKHAELLALP
Sbjct: 61  EEIEEVEEEEEEEEEEEEGEEEDVEEVEDDGTNENGINAQNEISNDEDEKKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIPQDSSE+DLR FCESIGEVTEVR+MRSKESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPQDSSEEDLRSFCESIGEVTEVRIMRSKESNENKGFAFVTYRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDL+KVVT+IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLRKVVTDIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAFIDYYNH+CAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFIDYYNHSCAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYG VNAGYG SG
Sbjct: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGGVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGG GG GGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGGGGGGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSK+GGSSSRGRHSHD GH GGHGGHGRRYRPY
Sbjct: 481 GSKSGGSSSRGRHSHDGGH-GGHGGHGRRYRPY 512

[Close]

BLAST of CSPI06G23250 vs. NCBI nr
Match: XP_023513235.1 (heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_023513236.1 heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 859.4 bits (2219), Expect = 1.6e-245
Identity = 468/513 (91.23%), Postives = 482/513 (93.96%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 1   MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIE   EEEEEEE+EEEG+EEDVEEVEDDG ND+ IN QNE  NDEDE KKHAELLALP
Sbjct: 61  EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDSRINGQNEIDNDEDEKKKHAELLALP 120

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIP DSSE+DLR+FCE IGEVTEVRVMRSKESNENKGFAFVT+RSVELASK
Sbjct: 121 PHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASK 180

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 240

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 241 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 301 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 360

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYG SG
Sbjct: 361 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 420

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR     SGG+GGGS
Sbjct: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR-----SGGNGGGS 480

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRH+HD      +  HGRRYRPY
Sbjct: 481 GSKNGGSSSRGRHTHD------NNSHGRRYRPY 500

[Close]

BLAST of CSPI06G23250 vs. NCBI nr
Match: KAG7010343.1 (Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 859.0 bits (2218), Expect = 2.1e-245
Identity = 468/513 (91.23%), Postives = 481/513 (93.76%), Query Frame = 0


Query: 1   MPRGKGNASSTARPVEPEKQNEPEKPGDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 60
           MP GKGNASS ARPVEPEKQNE EKP DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV
Sbjct: 160 MPSGKGNASSIARPVEPEKQNESEKPVDSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEV 219

Query: 61  EEIEEVEEEEEEEEDEEEGDEEDVEEVEDDGTNDNGINSQNETINDEDETKKHAELLALP 120
           EEIE   EEEEEEE+EEEG+EEDVEEVEDDG NDN IN QNE  NDEDE KKHAELLALP
Sbjct: 220 EEIE--VEEEEEEEEEEEGEEEDVEEVEDDGNNDNRINGQNEIDNDEDEKKKHAELLALP 279

Query: 121 PHGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASK 180
           PHGSEVYVGGIP DSSE+DLR+FCE IGEVTEVRVMRSKESNENKGFAFVT+RSVELASK
Sbjct: 280 PHGSEVYVGGIPHDSSEEDLRQFCEPIGEVTEVRVMRSKESNENKGFAFVTYRSVELASK 339

Query: 181 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDM 240
           AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVV +IGPGVTAVELVKDM
Sbjct: 340 AIDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVKDIGPGVTAVELVKDM 399

Query: 241 KNTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNADSSAASQVKAV 300
           KNTSNNRGFAF+DYYNHACAEYSRQKMMNP FKLDDNAPTVSWADPKNADSSAASQVKAV
Sbjct: 400 KNTSNNRGFAFVDYYNHACAEYSRQKMMNPTFKLDDNAPTVSWADPKNADSSAASQVKAV 459

Query: 301 YVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTE 360
           YVKNLPKNVTQEQLK+LFDHHGKITKVVLPPAK+GQEKNRIGFVHFSERSSAMKALKNTE
Sbjct: 460 YVKNLPKNVTQEQLKRLFDHHGKITKVVLPPAKAGQEKNRIGFVHFSERSSAMKALKNTE 519

Query: 361 KYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSG 420
           KYELDGQ+LECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGG YGAVNAGYG SG
Sbjct: 520 KYELDGQLLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVGYGFVGGPYGAVNAGYGASG 579

Query: 421 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGGSGGGS 480
           FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR     SGG+GGGS
Sbjct: 580 FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPR-----SGGNGGGS 639

Query: 481 GSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           GSKNGGSSSRGRH+HD      +  HGRRYRPY
Sbjct: 640 GSKNGGSSSRGRHTHD------NSSHGRRYRPY 659

[Close]

BLAST of CSPI06G23250 vs. TAIR 10
Match: AT3G52660.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 498.8 bits (1283), Expect = 5.2e-141
Identity = 284/475 (59.79%), Postives = 355/475 (74.74%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEEGDEEDVEEV 87
           +S+ERVDLD DNDPEE++EE+VEYEEVEEEE  E  EE+EEE E EE+EEE D    EE 
Sbjct: 16  ESEERVDLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEEDAVATEE- 75

Query: 88  EDDGTNDNGINSQNETINDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESI 147
                              E+E K+H ELLALPPHGSEVY+GGIP D++E DL+ FC SI
Sbjct: 76  -------------------EEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSI 135

Query: 148 GEVTEVRVMRSKESNENKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLF 207
           GEVTEVR+MR K+S + KG+AFVTFRS +LA++AID LNNT+F+GK+IKCS++QAKHRLF
Sbjct: 136 GEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLF 195

Query: 208 IGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKM 267
           +GNVPR+W E D+KK    IGPGV  VEL K+ +N   NRGFAFI+YYNHACAEYS+QKM
Sbjct: 196 LGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKM 255

Query: 268 MNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKIT 327
            NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF+HHGKI 
Sbjct: 256 SNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKIL 315

Query: 328 KVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGS 387
           KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQADQK+  +
Sbjct: 316 KVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTN 375

Query: 388 ---NSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPML 447
              N QKS L PNYPP + YG     +GA+  G+G S + QPL++  G    GM+MMP++
Sbjct: 376 TVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGGMSMMPIM 435

Query: 448 LPDGRIGYVLQQPG-SQMLTPPPHPRSGGGGSGGSGGGSGSKNGGSSSRGRHSHD 497
           LPDGRIGYVLQQPG + M  PPP       G  GS   SGSK    + RGR  ++
Sbjct: 436 LPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRSRYN 469

[Close]

BLAST of CSPI06G23250 vs. TAIR 10
Match: AT3G52660.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 498.8 bits (1283), Expect = 5.2e-141
Identity = 284/475 (59.79%), Postives = 355/475 (74.74%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEEGDEEDVEEV 87
           +S+ERVDLD DNDPEE++EE+VEYEEVEEEE  E  EE+EEE E EE+EEE D    EE 
Sbjct: 16  ESEERVDLDGDNDPEEILEEEVEYEEVEEEEIEEIEEEIEEEVEVEEEEEEEDAVATEE- 75

Query: 88  EDDGTNDNGINSQNETINDEDETKKHAELLALPPHGSEVYVGGIPQDSSEDDLRRFCESI 147
                              E+E K+H ELLALPPHGSEVY+GGIP D++E DL+ FC SI
Sbjct: 76  -------------------EEEKKRHVELLALPPHGSEVYLGGIPTDATEGDLKGFCGSI 135

Query: 148 GEVTEVRVMRSKESNENKGFAFVTFRSVELASKAIDELNNTEFKGKKIKCSSSQAKHRLF 207
           GEVTEVR+MR K+S + KG+AFVTFRS +LA++AID LNNT+F+GK+IKCS++QAKHRLF
Sbjct: 136 GEVTEVRIMREKDSGDGKGYAFVTFRSKDLAAEAIDTLNNTDFRGKRIKCSTTQAKHRLF 195

Query: 208 IGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMKNTSNNRGFAFIDYYNHACAEYSRQKM 267
           +GNVPR+W E D+KK    IGPGV  VEL K+ +N   NRGFAFI+YYNHACAEYS+QKM
Sbjct: 196 LGNVPRNWMESDIKKAANRIGPGVQIVELPKEPQNMGRNRGFAFIEYYNHACAEYSKQKM 255

Query: 268 MNPKFKLDDNAPTVSWADPKN--ADSSAASQVKAVYVKNLPKNVTQEQLKKLFDHHGKIT 327
            NP FKLDDNAPTVSWA+ ++     S+ASQVKA+Y+KNLP+++TQE+LK LF+HHGKI 
Sbjct: 256 SNPSFKLDDNAPTVSWAESRSGGGGDSSASQVKALYIKNLPRDITQERLKALFEHHGKIL 315

Query: 328 KVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNTEKYELDGQVLECSLAKPQADQKSGGS 387
           KVV+PPAK G+E +R GFVH++ER+S M+ALKNTE+YE+DG +L+C+LAKPQADQK+  +
Sbjct: 316 KVVIPPAKPGKEDSRYGFVHYAERTSVMRALKNTERYEIDGHMLDCTLAKPQADQKTNTN 375

Query: 388 ---NSQKSGLLPNYPPRVGYGFVGGAYGAVNAGYGGSGFGQPLIYGRGPTPAGMAMMPML 447
              N QKS L PNYPP + YG     +GA+  G+G S + QPL++  G    GM+MMP++
Sbjct: 376 TVQNVQKSQLQPNYPPLLSYGMAPSPFGAL-GGFGASAYSQPLMHAGGHAAGGMSMMPIM 435

Query: 448 LPDGRIGYVLQQPG-SQMLTPPPHPRSGGGGSGGSGGGSGSKNGGSSSRGRHSHD 497
           LPDGRIGYVLQQPG + M  PPP       G  GS   SGSK    + RGR  ++
Sbjct: 436 LPDGRIGYVLQQPGLAAMPQPPPRHSPPYRGGSGSSSSSGSKRSSDNGRGRSRYN 469

[Close]

BLAST of CSPI06G23250 vs. TAIR 10
Match: AT4G00830.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-116
Identity = 258/518 (49.81%), Postives = 350/518 (67.57%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEE--------- 87
           D+D+RVD            E+  Y E+E+E E E++EE EEEEEE++D+++         
Sbjct: 6   DNDDRVDF-----------EEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEER 65

Query: 88  ----------GDEEDV-EEVEDDGTNDNGINSQNE------TINDEDETKKHAELLALPP 147
                     GD EDV EE+ +D  N   I + ++       I+DED  +K++ LL+LPP
Sbjct: 66  EVEDYGDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDR-EKYSHLLSLPP 125

Query: 148 HGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASKA 207
           HGSEV++GG+P+D  E+DLR  CE IGE+ EVR+M+ ++S ++KG+AFV F++ ++A KA
Sbjct: 126 HGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKA 185

Query: 208 IDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMK 267
           I+EL++ EFKGK I+CS S+ K+RLFIGN+P++W E++ +KV+ ++GPGV  +EL+KD  
Sbjct: 186 IEELHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPT 245

Query: 268 NTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKA 327
           NT+ NRGFAF+ YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA
Sbjct: 246 NTTRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKA 305

Query: 328 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 387
           +YVKN+P+N + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+T
Sbjct: 306 LYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDT 365

Query: 388 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNAGY 447
           E+YE++GQ LE  LAKPQA++K   S S   G  P   P V     GF    YGA+ AG 
Sbjct: 366 ERYEVNGQPLEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGL 425

Query: 448 GGSG-FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGG 507
           G +G F QP+IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP        + G
Sbjct: 426 GIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNG 485

Query: 508 SGGGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           S GGSG  N        H HD   G      GRRYRPY
Sbjct: 486 SSGGSGRDNS-------HEHDGNRG------GRRYRPY 495

[Close]

BLAST of CSPI06G23250 vs. TAIR 10
Match: AT4G00830.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 416.4 bits (1069), Expect = 3.4e-116
Identity = 258/518 (49.81%), Postives = 350/518 (67.57%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEE--------- 87
           D+D+RVD            E+  Y E+E+E E E++EE EEEEEE++D+++         
Sbjct: 6   DNDDRVDF-----------EEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEER 65

Query: 88  ----------GDEEDV-EEVEDDGTNDNGINSQNE------TINDEDETKKHAELLALPP 147
                     GD EDV EE+ +D  N   I + ++       I+DED  +K++ LL+LPP
Sbjct: 66  EVEDYGDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDR-EKYSHLLSLPP 125

Query: 148 HGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASKA 207
           HGSEV++GG+P+D  E+DLR  CE IGE+ EVR+M+ ++S ++KG+AFV F++ ++A KA
Sbjct: 126 HGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKA 185

Query: 208 IDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMK 267
           I+EL++ EFKGK I+CS S+ K+RLFIGN+P++W E++ +KV+ ++GPGV  +EL+KD  
Sbjct: 186 IEELHSKEFKGKTIRCSLSETKNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPT 245

Query: 268 NTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKA 327
           NT+ NRGFAF+ YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA
Sbjct: 246 NTTRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKA 305

Query: 328 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 387
           +YVKN+P+N + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+T
Sbjct: 306 LYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDT 365

Query: 388 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNAGY 447
           E+YE++GQ LE  LAKPQA++K   S S   G  P   P V     GF    YGA+ AG 
Sbjct: 366 ERYEVNGQPLEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGL 425

Query: 448 GGSG-FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGG 507
           G +G F QP+IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP        + G
Sbjct: 426 GIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNG 485

Query: 508 SGGGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           S GGSG  N        H HD   G      GRRYRPY
Sbjct: 486 SSGGSGRDNS-------HEHDGNRG------GRRYRPY 495

[Close]

BLAST of CSPI06G23250 vs. TAIR 10
Match: AT4G00830.4 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 399.8 bits (1026), Expect = 3.3e-111
Identity = 252/518 (48.65%), Postives = 342/518 (66.02%), Query Frame = 0


Query: 28  DSDERVDLDVDNDPEEVMEEDVEYEEVEEEEEVEEIEEVEEEEEEEEDEEE--------- 87
           D+D+RVD            E+  Y E+E+E E E++EE EEEEEE++D+++         
Sbjct: 6   DNDDRVDF-----------EEGSYSEMEDEVEEEQVEEYEEEEEEDDDDDDVGNQNAEER 65

Query: 88  ----------GDEEDV-EEVEDDGTNDNGINSQNE------TINDEDETKKHAELLALPP 147
                     GD EDV EE+ +D  N   I + ++       I+DED  +K++ LL+LPP
Sbjct: 66  EVEDYGDTKGGDMEDVQEEIAEDDDNHIDIETADDDEKPPSPIDDEDR-EKYSHLLSLPP 125

Query: 148 HGSEVYVGGIPQDSSEDDLRRFCESIGEVTEVRVMRSKESNENKGFAFVTFRSVELASKA 207
           HGSEV++GG+P+D  E+DLR  CE IGE+ EVR+M+ ++S ++KG+AFV F++ ++A KA
Sbjct: 126 HGSEVFIGGLPRDVGEEDLRDLCEEIGEIFEVRLMKDRDSGDSKGYAFVAFKTKDVAQKA 185

Query: 208 IDELNNTEFKGKKIKCSSSQAKHRLFIGNVPRSWGEEDLKKVVTEIGPGVTAVELVKDMK 267
           I+EL++ EFK       S    +RLFIGN+P++W E++ +KV+ ++GPGV  +EL+KD  
Sbjct: 186 IEELHSKEFKASSTANCSLSLSNRLFIGNIPKNWTEDEFRKVIEDVGPGVENIELIKDPT 245

Query: 268 NTSNNRGFAFIDYYNHACAEYSRQKMMNPKFKLDDNAPTVSWADPKNA--DSSAASQVKA 327
           NT+ NRGFAF+ YYN+ACA+YSRQKM++  FKL+ NAPTV+WADPK++   S+AA+QVKA
Sbjct: 246 NTTRNRGFAFVLYYNNACADYSRQKMIDSNFKLEGNAPTVTWADPKSSPEHSAAAAQVKA 305

Query: 328 VYVKNLPKNVTQEQLKKLFDHHGKITKVVLPPAKSGQEKNRIGFVHFSERSSAMKALKNT 387
           +YVKN+P+N + EQLK+LF  HG++TK+V PP K G  K   GFVH++ERSSA+KA+K+T
Sbjct: 306 LYVKNIPENTSTEQLKELFQRHGEVTKIVTPPGKGG--KRDFGFVHYAERSSALKAVKDT 365

Query: 388 EKYELDGQVLECSLAKPQADQKSGGSNSQKSGLLPNYPPRVG---YGFVGGAYGAVNAGY 447
           E+YE++GQ LE  LAKPQA++K   S S   G  P   P V     GF    YGA+ AG 
Sbjct: 366 ERYEVNGQPLEVVLAKPQAERKHDPS-SYSYGAAPTPAPFVHPTFGGFAAAPYGAMGAGL 425

Query: 448 GGSG-FGQPLIYGRGPTPAGMAMMPMLLPDGRIGYVLQQPGSQMLTPPPHPRSGGGGSGG 507
           G +G F QP+IYGRG  P GM M+PMLLPDGR+GYVLQQPG  M   PP        + G
Sbjct: 426 GIAGSFSQPMIYGRGAMPTGMQMVPMLLPDGRVGYVLQQPGMPMAAAPPQRPRRNDRNNG 485

Query: 508 SGGGSGSKNGGSSSRGRHSHDSGHGGGHGGHGRRYRPY 514
           S GGSG  N        H HD   G      GRRYRPY
Sbjct: 486 SSGGSGRDNS-------HEHDGNRG------GRRYRPY 495

The following BLAST results are available for this feature:

BLAST of CSPI06G23250 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9ASP6	4.7e-115	49.81	Heterogeneous nuclear ribonucleoprotein Q OS=Arabidopsis thaliana OX=3702 GN=LIF...	[more]
O43390	7.5e-36	30.32	Heterogeneous nuclear ribonucleoprotein R OS=Homo sapiens OX=9606 GN=HNRNPR PE=1...	[more]
O60506	5.4e-34	31.59	Heterogeneous nuclear ribonucleoprotein Q OS=Homo sapiens OX=9606 GN=SYNCRIP PE=...	[more]
Q7TMK9	7.0e-34	31.59	Heterogeneous nuclear ribonucleoprotein Q OS=Mus musculus OX=10090 GN=Syncrip PE...	[more]
Q7TP47	7.0e-34	31.59	Heterogeneous nuclear ribonucleoprotein Q OS=Rattus norvegicus OX=10116 GN=Syncr...	[more]

BLAST of CSPI06G23250 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KI54	1.6e-275	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G425690 PE=4 SV=1	[more]
A0A1S3BMC2	2.5e-268	97.87	nucleolin OS=Cucumis melo OX=3656 GN=LOC103491420 PE=4 SV=1	[more]
A0A6J1FY14	1.0e-245	91.23	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]
A0A6J1J6P3	1.7e-245	90.84	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita maxima OX=3661 GN=LO...	[more]
A0A6J1H0I9	5.1e-245	90.87	heterogeneous nuclear ribonucleoprotein Q-like OS=Cucurbita moschata OX=3662 GN=...	[more]

BLAST of CSPI06G23250 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031744156.1	3.3e-275	100.00	heterogeneous nuclear ribonucleoprotein Q [Cucumis sativus] >KGN48032.1 hypothet...	[more]
XP_008449579.1	5.2e-268	97.87	PREDICTED: nucleolin [Cucumis melo] >XP_008449580.1 PREDICTED: nucleolin [Cucumi...	[more]
XP_038902706.1	2.9e-263	95.71	heterogeneous nuclear ribonucleoprotein Q [Benincasa hispida] >XP_038902707.1 he...	[more]
XP_023513235.1	1.6e-245	91.23	heterogeneous nuclear ribonucleoprotein Q-like [Cucurbita pepo subsp. pepo] >XP_...	[more]
KAG7010343.1	2.1e-245	91.23	Heterogeneous nuclear ribonucleoprotein Q, partial [Cucurbita argyrosperma subsp...	[more]

BLAST of CSPI06G23250 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G52660.1	5.2e-141	59.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G52660.2	5.2e-141	59.79	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.1	3.4e-116	49.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.2	3.4e-116	49.81	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G00830.4	3.3e-111	48.65	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 46..90
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 454..513
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 489..503
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 17..32
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 33..92
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..109
None	No IPR available	PANTHER	PTHR10352	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G	coord: 1..476
None	No IPR available	PANTHER	PTHR10352:SF41	RNA RECOGNITION MOTIF	coord: 1..476
None	No IPR available	CDD	cd00590	RRM_SF	coord: 126..198 e-value: 8.83921E-23 score: 90.0569
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 299..372 e-value: 1.6E-15 score: 67.6 coord: 205..282 e-value: 2.0E-10 score: 50.6 coord: 125..198 e-value: 2.5E-25 score: 100.2
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 300..369 e-value: 2.1E-15 score: 56.3 coord: 126..196 e-value: 9.1E-20 score: 70.3 coord: 206..269 e-value: 9.3E-10 score: 38.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 204..286 score: 11.861064
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 124..202 score: 19.007277
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 298..376 score: 15.186867
IPR003954	RNA recognition motif domain, eukaryote	SMART	SM00361	rrm2_1	coord: 299..372 e-value: 2.2 score: 10.7 coord: 125..198 e-value: 1.5E-6 score: 37.8
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 35..204 e-value: 1.1E-29 score: 105.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 205..285 e-value: 4.0E-21 score: 76.9
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 286..420 e-value: 5.3E-22 score: 80.4
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 294..403
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 121..290

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G23250.1	CSPI06G23250.1	mRNA
CSPI06G23250.2	CSPI06G23250.2	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:1990904	ribonucleoprotein complex
molecular_function	GO:0003723	RNA binding
molecular_function	GO:0003676	nucleic acid binding