CSPI06G21990 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G21990
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	preprotein translocase subunit SCY2, chloroplastic
Location	Chr6: 19934985 .. 19936173 (-)
RNA-Seq Expression	CSPI06G21990
Synteny	CSPI06G21990

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATATAACTATGTAAATTGAATTTGTTAGTCCACTCTCACATGTTCCTTTACCTTTCCAGGCTAACCTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGTATGTTTTATCATTCAACTTCTGATTTGAAGGACAAAGTCTTTCCTAGCTTGCCATTGTTTTCATATATTGGTCGAGGTTGATTTCCTTTTGACTTTGGATTGTAAATTACAGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTAAGTGCTAAAATTTATCATTTTCTTATCATTCTTCAGTCATTGAAAAATGCCATGACACTGGTTATCCCTCCACATACACAGTTTTAACCCTGACAATGCAACTAATCGTCGTTGTAAATATTTCCAACAGATTGTTGGGATTTTGATAGAAATACAAATACTGTATCCTCCCATATCAAAATCTGTTAAGAGGAAGATGTGGTAGATTTATCATATTAGTATACTATTCAAAATTTCCAACCTTATTGATGAACTTAAGTTGCTGCATGTTCACTGTTCAGGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAACAAGTTCAAATGATGCTCCTAGTGGTTCTGTATTTGTGCCTCAAAAGTATCCAATAATCTCTTTCAAGTATAATTGTCTGATTCCTCCTGGCTCGTAGCTGGACTAGAACAGAGCCTTTCATCCCTTCCTCAATTCTTTTTTAGTGCTGAGGACTGCAGAGTTTCAGAATAGTGGCCATCCATAACAATGTATACCCACACAAGTACCAAGAAAATTTTGATCCTCTGGTCTTTGAAACATCTAGCGAACAAGGGACACAAGCATTGGAATGTTAAAGATGCTAATCACGAGTGTAGCTGCAAGATCTTATTCTTGAGCCTAATTTTGACCATTTTCTCCCTATTTTGTATATATAAATTCTGTAATATGAATCTTAACATATTTATTAGATTATAGGTACATCGGTG

mRNA sequence

CAAATATAACTATGTAAATTGAATTTGTTAGTCCACTCTCACATGTTCCTTTACCTTTCCAGGCTAACCTGCCAAAAGAGATTTCAGACTATTTAAATAAGATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAACAAGTTCAAATGATGCTCCTAGTGGTTCTGTATTTGTGCCTCAAAAGTATCCAATAATCTCTTTCAAGTATAATTGTCTGATTCCTCCTGGCTCGTAGCTGGACTAGAACAGAGCCTTTCATCCCTTCCTCAATTCTTTTTTAGTGCTGAGGACTGCAGAGTTTCAGAATAGTGGCCATCCATAACAATGTATACCCACACAAGTACCAAGAAAATTTTGATCCTCTGGTCTTTGAAACATCTAGCGAACAAGGGACACAAGCATTGGAATGTTAAAGATGCTAATCACGAGTGTAGCTGCAAGATCTTATTCTTGAGCCTAATTTTGACCATTTTCTCCCTATTTTGTATATATAAATTCTGTAATATGAATCTTAACATATTTATTAGATTATAGGTACATCGGTG

Coding sequence (CDS)

ATGGGAGCAAGGATACCGAACATTAAACCAGGGAAAGCTTCTATAGAGTACCTAACGAAAATTCAAGCATCAACACGCTTTTGGGGAGGGCTACTGTTGAGTTTTTTGGCAACGACATCATCTGTTCTTGATCATTACTTACGCAGTGTTAATGCCGGTTTTGCAATTGGTTTTACATCAGTTCTGATTATTGTTGGTTCCATTATTGAACTCAGAAGATCTTACCAAGCATATAATGTCATGCCAAGTTTAAGCAATGCTTTGAGGCGCTATGGTGTATAA

Protein sequence

MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTSVLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV*

Homology

[Close]

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot
Match: F4IQV7 (Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SCY2 PE=2 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 1.8e-41
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLAT S+VLDHYLRS+N GF+IGFTS
Sbjct: 483 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTS 542

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSY AYNVMPSLS AL+RYGV
Sbjct: 543 VLIIVGSIIELRRSYHAYNVMPSLSKALKRYGV 575

[Close]

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot
Match: P38397 (Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina OX=3034 GN=secY PE=3 SV=1)

HSP 1 Score: 59.3 bits (142), Expect = 2.7e-08
Identity = 30/89 (33.71%), Postives = 52/89 (58.43%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           M + IP ++PGKA+ +YL K      F G L L+F+A   S++++ + S++    +G TS
Sbjct: 325 MESSIPGVRPGKATTDYLQKTLNRLTFLGALFLAFIAVVPSIIEN-ITSISTFKGLGATS 384

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALR 90
           +LI+VG  I+  R  Q Y +  +  N ++
Sbjct: 385 LLILVGVAIDTSRQIQTYLISRNYENIMK 412

[Close]

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot
Match: Q37143 (Protein translocase subunit SecY OS=Antithamnion sp. OX=2767 GN=secY PE=3 SV=1)

HSP 1 Score: 50.4 bits (119), Expect = 1.2e-05
Identity = 30/79 (37.97%), Postives = 43/79 (54.43%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYL-TKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFT 60
           MGA IPNI+PG  +I+YL T+I   T    G    F  T    + +Y+  +N    +G T
Sbjct: 319 MGASIPNIRPGSETIKYLNTRINRLTLI--GACFLFTITLFPTITYYIFKINTLKGLGAT 378

Query: 61  SVLIIVGSIIELRRSYQAY 79
           S+LI+VG  I+  +  Q Y
Sbjct: 379 SLLILVGVAIDTAKQIQTY 395

[Close]

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot
Match: P28527 (Protein translocase subunit SecY OS=Guillardia theta OX=55529 GN=secY PE=3 SV=2)

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-05
Identity = 28/89 (31.46%), Postives = 49/89 (55.06%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           M + I  ++PGKA+ EYL K      F G L L+F+A   ++++  L +++    +G TS
Sbjct: 333 MESSIYGVRPGKATTEYLQKTLNRLTFLGALFLAFIAIVPNIIE-TLTNLSVFKGLGGTS 392

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALR 90
           +LIIVG  ++  +  Q Y +  +    +R
Sbjct: 393 LLIIVGVQVDTSKQIQTYLISKNYETIVR 420

[Close]

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot
Match: P51297 (Protein translocase subunit SecY OS=Porphyra purpurea OX=2787 GN=secY PE=3 SV=1)

HSP 1 Score: 49.7 bits (117), Expect = 2.1e-05
Identity = 29/78 (37.18%), Postives = 43/78 (55.13%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGA IPNI+PG+A+I+YL  I     F G   L  +A    +++   +  N    +G TS
Sbjct: 324 MGASIPNIRPGQATIDYLQVILNRLTFLGATFLFTVALIPFIIEKVAQIQNLR-GLGATS 383

Query: 61  VLIIVGSIIELRRSYQAY 79
           +LI+VG  I+  +  Q Y
Sbjct: 384 LLILVGVAIDTAKQIQTY 400

[Close]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL
Match: A0A0A0KDV7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410010 PE=3 SV=1)

HSP 1 Score: 182.6 bits (462), Expect = 7.8e-43
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1  MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
          MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS
Sbjct: 1  MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60

Query: 61 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
          VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 61 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 93

[Close]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL
Match: A0A5A7UN66 (Preprotein translocase subunit SCY2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold496G00530 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSS+LDHYLRSVNAGFAIGFTS
Sbjct: 189 MGARIPNIKPGKASIEYLTKVQASTRFWGGLLLSFLATTSSLLDHYLRSVNAGFAIGFTS 248

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 249 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 281

[Close]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL
Match: A0A1S3BM25 (preprotein translocase subunit SCY2, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103491333 PE=3 SV=1)

HSP 1 Score: 181.0 bits (458), Expect = 2.3e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSS+LDHYLRSVNAGFAIGFTS
Sbjct: 486 MGARIPNIKPGKASIEYLTKVQASTRFWGGLLLSFLATTSSLLDHYLRSVNAGFAIGFTS 545

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 546 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 578

[Close]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL
Match: A0A6J1HFX8 (preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111463947 PE=3 SV=1)

HSP 1 Score: 179.9 bits (455), Expect = 5.0e-42
Identity = 90/93 (96.77%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLATTSS+LDHYLRS+NAGFAIGFTS
Sbjct: 486 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 545

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 546 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 578

[Close]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL
Match: A0A6J1DMV0 (preprotein translocase subunit SCY2, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111022689 PE=3 SV=1)

HSP 1 Score: 178.7 bits (452), Expect = 1.1e-41
Identity = 90/93 (96.77%), Postives = 92/93 (98.92%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLS LATTSSVLDHYLRS+NAGFAIGFTS
Sbjct: 494 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSILATTSSVLDHYLRSINAGFAIGFTS 553

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 554 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 586

[Close]

BLAST of CSPI06G21990 vs. NCBI nr
Match: XP_004140093.2 (preprotein translocase subunit SCY2, chloroplastic [Cucumis sativus] >KAE8647324.1 hypothetical protein Csa_004274 [Cucumis sativus])

HSP 1 Score: 182.6 bits (462), Expect = 1.6e-42
Identity = 93/93 (100.00%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS
Sbjct: 486 MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 545

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 546 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 578

[Close]

BLAST of CSPI06G21990 vs. NCBI nr
Match: KAA0057302.1 (preprotein translocase subunit SCY2 [Cucumis melo var. makuwa] >TYK13432.1 preprotein translocase subunit SCY2 [Cucumis melo var. makuwa])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSS+LDHYLRSVNAGFAIGFTS
Sbjct: 189 MGARIPNIKPGKASIEYLTKVQASTRFWGGLLLSFLATTSSLLDHYLRSVNAGFAIGFTS 248

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 249 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 281

[Close]

BLAST of CSPI06G21990 vs. NCBI nr
Match: XP_008449450.1 (PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Cucumis melo])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTK+QASTRFWGGLLLSFLATTSS+LDHYLRSVNAGFAIGFTS
Sbjct: 486 MGARIPNIKPGKASIEYLTKVQASTRFWGGLLLSFLATTSSLLDHYLRSVNAGFAIGFTS 545

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 546 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 578

[Close]

BLAST of CSPI06G21990 vs. NCBI nr
Match: XP_038888196.1 (preprotein translocase subunit SCY2, chloroplastic isoform X3 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSS+LDHYLRS+NAGFAIGFTS
Sbjct: 402 MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 461

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 462 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 494

[Close]

BLAST of CSPI06G21990 vs. NCBI nr
Match: XP_038888194.1 (preprotein translocase subunit SCY2, chloroplastic isoform X1 [Benincasa hispida])

HSP 1 Score: 181.0 bits (458), Expect = 4.7e-42
Identity = 91/93 (97.85%), Postives = 93/93 (100.00%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSS+LDHYLRS+NAGFAIGFTS
Sbjct: 486 MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSLLDHYLRSINAGFAIGFTS 545

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV
Sbjct: 546 VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 578

[Close]

BLAST of CSPI06G21990 vs. TAIR 10
Match: AT2G31530.1 (SecY protein transport family protein )

HSP 1 Score: 169.5 bits (428), Expect = 1.3e-42
Identity = 84/93 (90.32%), Postives = 89/93 (95.70%), Query Frame = 0


Query: 1   MGARIPNIKPGKASIEYLTKIQASTRFWGGLLLSFLATTSSVLDHYLRSVNAGFAIGFTS 60
           MGARIPNIKPGKA+IEYLTKIQASTRFWGGLLLSFLAT S+VLDHYLRS+N GF+IGFTS
Sbjct: 483 MGARIPNIKPGKATIEYLTKIQASTRFWGGLLLSFLATASTVLDHYLRSINQGFSIGFTS 542

Query: 61  VLIIVGSIIELRRSYQAYNVMPSLSNALRRYGV 94
           VLIIVGSIIELRRSY AYNVMPSLS AL+RYGV
Sbjct: 543 VLIIVGSIIELRRSYHAYNVMPSLSKALKRYGV 575

The following BLAST results are available for this feature:

BLAST of CSPI06G21990 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4IQV7	1.8e-41	90.32	Preprotein translocase subunit SCY2, chloroplastic OS=Arabidopsis thaliana OX=37...	[more]
P38397	2.7e-08	33.71	Protein translocase subunit SecY (Fragment) OS=Pyrenomonas salina OX=3034 GN=sec...	[more]
Q37143	1.2e-05	37.97	Protein translocase subunit SecY OS=Antithamnion sp. OX=2767 GN=secY PE=3 SV=1	[more]
P28527	2.1e-05	31.46	Protein translocase subunit SecY OS=Guillardia theta OX=55529 GN=secY PE=3 SV=2	[more]
P51297	2.1e-05	37.18	Protein translocase subunit SecY OS=Porphyra purpurea OX=2787 GN=secY PE=3 SV=1	[more]

BLAST of CSPI06G21990 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDV7	7.8e-43	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G410010 PE=3 SV=1	[more]
A0A5A7UN66	2.3e-42	97.85	Preprotein translocase subunit SCY2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5...	[more]
A0A1S3BM25	2.3e-42	97.85	preprotein translocase subunit SCY2, chloroplastic OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A6J1HFX8	5.0e-42	96.77	preprotein translocase subunit SCY2, chloroplastic OS=Cucurbita moschata OX=3662...	[more]
A0A6J1DMV0	1.1e-41	96.77	preprotein translocase subunit SCY2, chloroplastic isoform X1 OS=Momordica chara...	[more]

BLAST of CSPI06G21990 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140093.2	1.6e-42	100.00	preprotein translocase subunit SCY2, chloroplastic [Cucumis sativus] >KAE8647324...	[more]
KAA0057302.1	4.7e-42	97.85	preprotein translocase subunit SCY2 [Cucumis melo var. makuwa] >TYK13432.1 prepr...	[more]
XP_008449450.1	4.7e-42	97.85	PREDICTED: preprotein translocase subunit SCY2, chloroplastic [Cucumis melo]	[more]
XP_038888196.1	4.7e-42	97.85	preprotein translocase subunit SCY2, chloroplastic isoform X3 [Benincasa hispida...	[more]
XP_038888194.1	4.7e-42	97.85	preprotein translocase subunit SCY2, chloroplastic isoform X1 [Benincasa hispida...	[more]

BLAST of CSPI06G21990 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G31530.1	1.3e-42	90.32	SecY protein transport family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002208	SecY/SEC61-alpha family	PFAM	PF00344	SecY	coord: 2..71 e-value: 4.4E-11 score: 42.6
IPR002208	SecY/SEC61-alpha family	PANTHER	PTHR10906	SECY/SEC61-ALPHA FAMILY MEMBER	coord: 1..92
IPR023201	SecY domain superfamily	GENE3D	1.10.3370.10	SecY subunit domain	coord: 1..83 e-value: 1.5E-17 score: 65.5
IPR023201	SecY domain superfamily	SUPERFAMILY	103491	Preprotein translocase SecY subunit	coord: 1..78
None	No IPR available	PANTHER	PTHR10906:SF2	PREPROTEIN TRANSLOCASE SUBUNIT SCY2, CHLOROPLASTIC	coord: 1..92

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G21990.1	CSPI06G21990.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009658	chloroplast organization
biological_process	GO:0072598	protein localization to chloroplast
biological_process	GO:0006616	SRP-dependent cotranslational protein targeting to membrane, translocation
biological_process	GO:0010027	thylakoid membrane organization
biological_process	GO:0015031	protein transport
cellular_component	GO:0009535	chloroplast thylakoid membrane
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0016020	membrane
molecular_function	GO:0008320	protein transmembrane transporter activity
molecular_function	GO:0005048	signal sequence binding