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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. ATGAAAAACCAATTTCTAAACCCTTTCCTTCTCCTTTCCTTTCCCTTTCCCTTGTTTTCCTCCGCCACCCTCCGCCTCCCCCTCCCCTTACTCTCCGGCGCCGCCGTCTCCTCCTCCTCCTCCTCCTCCACCACCTCCTCCACCTCCACCTTTGTATTTGTATTCTCCATTATTATGATCATAATTACAATTCTCCTTCTTCCATATTCCCTTCTTTCTCTCCTCTCACTTTCCCCCCGTACAATTCCACCTTCTTCCTACGGTCCCTAGATCTCTCTCTCTCTCTCTCTGCCCTCATCACTGACCTCCTCTTCCCCTCTCCCCTGTTCCTCTTTGGCCCATCTCCACCCCTCGCTTTCTTTCTTTCTCGCTCATTTCTAGGGTTTCCCCTTTCCAATTATGATCACTCTTATTGGGTTTGATCCTTTCTCTTCTGCCTTCCTCTCGCTTTTTCCTGTTTCTCTTCATCATTCCTCTCCTACCCTTTTCCTCCCCATTCAGTTCTTTTCAATTTCCTCCTGA mRNA sequence ATGAAAAACCAATTTCTAAACCCTTTCCTTCTCCTTTCCTTTCCCTTTCCCTTGTTTTCCTCCGCCACCCTCCGCCTCCCCCTCCCCTTACTCTCCGGCGCCGCCGTCTCCTCCTCCTCCTCCTCCTCCACCACCTCCTCCACCTCCACCTTTGGTTTCCCCTTTCCAATTATGATCACTCTTATTGGGTTTGATCCTTTCTCTTCTGCCTTCCTCTCGCTTTTTCCTGTTTCTCTTCATCATTCCTCTCCTACCCTTTTCCTCCCCATTCAGTTCTTTTCAATTTCCTCCTGA Coding sequence (CDS) ATGAAAAACCAATTTCTAAACCCTTTCCTTCTCCTTTCCTTTCCCTTTCCCTTGTTTTCCTCCGCCACCCTCCGCCTCCCCCTCCCCTTACTCTCCGGCGCCGCCGTCTCCTCCTCCTCCTCCTCCTCCACCACCTCCTCCACCTCCACCTTTGGTTTCCCCTTTCCAATTATGATCACTCTTATTGGGTTTGATCCTTTCTCTTCTGCCTTCCTCTCGCTTTTTCCTGTTTCTCTTCATCATTCCTCTCCTACCCTTTTCCTCCCCATTCAGTTCTTTTCAATTTCCTCCTGA Protein sequence MKNQFLNPFLLLSFPFPLFSSATLRLPLPLLSGAAVSSSSSSSTTSSTSTFGFPFPIMITLIGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS*
Homology
BLAST of CSPI06G20940 vs. ExPASy TrEMBL
Match: A0A0A0KDZ6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401480 PE=4 SV=1) HSP 1 Score: 174.1 bits (440), Expect = 2.9e-40 Identity = 97/98 (98.98%), Postives = 97/98 (98.98%), Query Frame = 0 Query: 1 MKNQFLNPFLLLSFPFPLFSSATLRLPLPLLSGAAV-SSSSSSSTTSSTSTFGFPFPIMI 60 MKNQFLNPFLLLSFPFPLFSSATLRLPLPLLSGAAV SSSSSSSTTSSTSTFGFPFPIMI Sbjct: 1 MKNQFLNPFLLLSFPFPLFSSATLRLPLPLLSGAAVSSSSSSSSTTSSTSTFGFPFPIMI 60
Query: 61 TLIGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS 98 TLIGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS Sbjct: 61 TLIGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS 98
BLAST of CSPI06G20940 vs. NCBI nr
Match: KAE8647285.1 (hypothetical protein Csa_023538, partial [Cucumis sativus]) HSP 1 Score: 124.8 bits (312), Expect = 4.1e-25 Identity = 78/96 (81.25%), Postives = 79/96 (82.29%), Query Frame = 0 Query: 5 FLNPFLLLSFPFPLFSSATLRLPLPLLSGAAV---SSSSSSSTTSSTSTFGFPFPIMITL 64 F +PFL LS F PLPLLSGAAV SSSSSSSTTSSTSTFGFPFPIMITL Sbjct: 8 FPSPFLSLSLVFLRHPPP----PLPLLSGAAVSSSSSSSSSSTTSSTSTFGFPFPIMITL 67
Query: 65 IGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS 98 IGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS Sbjct: 68 IGFDPFSSAFLSLFPVSLHHSSPTLFLPIQFFSISS 99
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KDZ6 | 2.9e-40 | 98.98 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G401480 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAE8647285.1 | 4.1e-25 | 81.25 | hypothetical protein Csa_023538, partial [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
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