CSPI06G20540 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G20540
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	BEST Arabidopsis thaliana protein match is: embryo defective 2170 .
Location	Chr6: 18636406 .. 18638549 (+)
RNA-Seq Expression	CSPI06G20540
Synteny	CSPI06G20540

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAAGTCTTAGATTCTAATTTTGGAATTTGCAATTTGAAAAAATAAAGAAGAGAAAAAATGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCCTCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTTCCTCACCATCTATTCCTCTCTCTCTCTCTCTCCTCTTCTTCATTTCCAATTCATCATGATCGGCAGCACCCGGAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAGTTCTCTTCTCCAACCAGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCCCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAAGGATTCTTATCTTGGCGGCGATCGGGAGGTTTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGCAGAACTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATCGGAACGACGACGAGGAAGAAGAAGAAGAAAAATGATTCTAGTTTGAATATGACTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCCTTTCTTATGGCTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGTAACAGTAACACCATAACTATCAATCAATTGCTTCTTTGATTCACTCTACTTTTTAACTTGAGATATGAATGTGCATGTTTCATCTTCTGTGTTGATATGAAAAACAGAGAAAATCACCACCGAATAGATCTATTTCTATTTTGGGTCATTCTCCGGGCTGCCTGTAGTATCGTAAGAATTTACTGAGTTGAACATAAATGGGTTTCTACTGAAATGAAGAACTTGCAAATTCAGTATCTCTACCATTTTGGGTAGTAGAATTCCTCAAGCTGTTTTATGCACTAGTAATTCTAAGAACTTGCTGAGTTAAATTGAATAACATGAATGAATTTTCTCTGAAAGGAAGAACAGCCAAATTCACCATTAAATAAGGCATCAGTTTGGGTAGTATAATTTTTCGAGCTGTTTAAGAATTTTGGGAAGAATAGGAATGGGTTTCCTCTGAAATGAAGAACACACAAATCTCTCCATTAAAAGGGAATCATCGCTTCTCTGCATCATTTTAAGTAGTGAAAGATTCTCAAACTCCCCATCCTCTAGGAACATAGGAGAATCTGATGAGTTGATGATGAATGATTTTCTCTCTGAAATGGACACACAATCTCACAATTCAATAGAATTATCTCTACTATGCATTGTTCTGGGTCTTGAATTTTCTTTAAGAAACTGCTATAAACTGGGTTGATCTTCATTCTTATGAATCAATTTAATACAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGGGATGAATGAACAAGAGGCTGCTCTGCCATGCACTCAAACAAAGTAAAAGCAGAAGCTATAGGTATATAAAGTTATGGAAATGAAGGCATTAATTTTACAGCGTTTGTAAATTCCCTTTCAGTTTCTCAACAAAAATGCTTCCTTTTTTTGTTTTTGTTTTTGTCTTTTTTTGGTTCTTTAATATATATGTATGCCCTGTGTCCTCCAGGGTTCCTCTTCTTTAAGCTAATTGATGGAATTAATCTCCCTTTCAACTAATATGTACTTTTGTATTTTCTTTTTCACTATCATTTTGATGGCTAAGAACTGTTCTGATGCTTTGTCTACAAAAGTGGTTCCATCCAATCAAATTATGCCTTAGATTCAAATTTTATTTATTTTTG

mRNA sequence

CAAAGTCTTAGATTCTAATTTTGGAATTTGCAATTTGAAAAAATAAAGAAGAGAAAAAATGACCCACAAAGAGTCGCCCATGAAAATGACTCTGCTTTCTTCAATCCTTCCTCTTCTTCTTCTTCCACTGCCATAATCATACCGCAACCTCCATTTTTCCTCACCATCTATTCCTCTCTCTCTCTCTCTCCTCTTCTTCATTTCCAATTCATCATGATCGGCAGCACCCGGAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAGTTCTCTTCTCCAACCAGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCCCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAAGGATTCTTATCTTGGCGGCGATCGGGAGGTTTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGCAGAACTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATCGGAACGACGACGAGGAAGAAGAAGAAGAAAAATGATTCTAGTTTGAATATGACTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCCTTTCTTATGGCTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGGGATGAATGAACAAGAGGCTGCTCTGCCATGCACTCAAACAAAGTAAAAGCAGAAGCTATAGGTATATAAAGTTATGGAAATGAAGGCATTAATTTTACAGCGTTTGTAAATTCCCTTTCAGTTTCTCAACAAAAATGCTTCCTTTTTTTGTTTTTGTTTTTGTCTTTTTTTGGTTCTTTAATATATATGTATGCCCTGTGTCCTCCAGGGTTCCTCTTCTTTAAGCTAATTGATGGAATTAATCTCCCTTTCAACTAATATGTACTTTTGTATTTTCTTTTTCACTATCATTTTGATGGCTAAGAACTGTTCTGATGCTTTGTCTACAAAAGTGGTTCCATCCAATCAAATTATGCCTTAGATTCAAATTTTATTTATTTTTG

Coding sequence (CDS)

ATGATCGGCAGCACCCGGAAGCTTCTCTCAAGCCCTACTGAATCCCCTGATTTTAGGGCTTTGAACACCACCATGGAGTTCTCTTCTCCAACCAGGTCCTCCAGACCCGCTCTCAATCACGATATCTTCAGGAGTTGGAATGGTAAGCAGATTCATCTCAGGGATGATCATCCCTTCGAATATGGGTTTCGTTTAACTAGTCCTCAACGGAGCCCCCAGTTTTACCGATCCAATTACCACACTCTGTCTCCGCCGTCCAAGGCTCTCGCTATCGCTACCGGACAGAAGGAGCTCATGGAAATTGTGAATAATATGCCGGAGTCGTGTTACGAGTTGTCGTTGAGAGATTTGGTGGAGCAGCCGATGGTTTTAGGGCAACGAGAAGACACTGGAGTGGATGAGAAGGATTCTTATCTTGGCGGCGATCGGGAGGTTTTTTCGAGGGAGAATCGGAAATCCAGGAAGGAAACTAGGGCTTTGGTTGGCAGAACTAGTATGGAGAATGAAGGTTTGTATCTGAAAATGGGGTTTCCGAAATCGATCGGAACGACGACGAGGAAGAAGAAGAAGAAAAATGATTCTAGTTTGAATATGACTGCTAAAGTTTCGCCTAAACCTCCTCAGTTGGTGGAAAAGGATTGGTGGAAGAGAAGACTCTCAGTTTCATCTGAGAGTGAAAGCCTTTCTTATGGCTCTAATGTTAACAATGGAAGCATCAAGAGCAGTAGCAGTAGTAGCAGCAATGGCAGCAACAAGAATAGAACAAAATCCACTGGCAGGCGTGCGAATGGAGGTTGCTGGTCATGGATTTATCCCAAATACCATGAACGGGATGAATGA

Protein sequence

MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKSIGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIKSSSSSSSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE*

Homology

[Close]

BLAST of CSPI06G20540 vs. ExPASy TrEMBL
Match: A0A1S4E6L8 (uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=4 SV=1)

HSP 1 Score: 523.9 bits (1348), Expect = 4.2e-145
Identity = 268/281 (95.37%), Postives = 275/281 (97.86%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGS 240
           KSIGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNGS
Sbjct: 181 KSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGS 240

Query: 241 IKSSSSSSSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
           IKSSSSSSSNGSNK+RTKSTGRRA GGCWSWIYPKYHERDE
Sbjct: 241 IKSSSSSSSNGSNKSRTKSTGRRAKGGCWSWIYPKYHERDE 281

[Close]

BLAST of CSPI06G20540 vs. ExPASy TrEMBL
Match: A0A0A0KH64 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1)

HSP 1 Score: 498.8 bits (1283), Expect = 1.5e-137
Identity = 259/266 (97.37%), Postives = 263/266 (98.87%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE 60
           MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE 60

Query: 61  YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ 120
           YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ
Sbjct: 61  YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ 120

Query: 121 PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS 180
           PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS
Sbjct: 121 PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS 180

Query: 181 IGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK 240
           IGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK
Sbjct: 181 IGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK 240

Query: 241 SSSSSSSNGSNKNRTKSTGRRANGGC 267
           SSSSSSS+GSNKNRTKSTGR ++  C
Sbjct: 241 SSSSSSSDGSNKNRTKSTGRESSLLC 266

[Close]

BLAST of CSPI06G20540 vs. ExPASy TrEMBL
Match: A0A5A7V1Z3 (Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold184G00330 PE=4 SV=1)

HSP 1 Score: 479.2 bits (1232), Expect = 1.2e-131
Identity = 250/262 (95.42%), Postives = 257/262 (98.09%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGS 240
           KSIGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNGS
Sbjct: 181 KSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGS 240

Query: 241 IKSSSSSSSNGSNKNRTKSTGR 261
           IKSSSSSSSNGSNK+RTKSTGR
Sbjct: 241 IKSSSSSSSNGSNKSRTKSTGR 262

[Close]

BLAST of CSPI06G20540 vs. ExPASy TrEMBL
Match: A0A6J1IJ72 (uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911 PE=4 SV=1)

HSP 1 Score: 410.2 bits (1053), Expect = 6.8e-111
Identity = 225/290 (77.59%), Postives = 247/290 (85.17%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPT-----RSSRPALNHDIFRSWNGKQIHLRD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60

Query: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSK+LAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKSLAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKS+KET  LVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFATENRKSKKETSGLVGRSSWNMENGGLYL 180

Query: 181 KMGFPKSIGTTTRKKKKK-NDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGS 240
           KMGFP SIGT T+KKKKK NDS LN +AKVSPKP   VEKDWWKRRLSVSSE+ S++Y S
Sbjct: 181 KMGFPNSIGTRTKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYDS 240

Query: 241 NVNNGSIKSSSSSS---SNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
            VNNGSIKSSSSSS   SNGSNKNRTKS+GR ANGGCWS IYPK +ERDE
Sbjct: 241 IVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPKCNERDE 287

[Close]

BLAST of CSPI06G20540 vs. ExPASy TrEMBL
Match: A0A6J1F9W6 (uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC111443607 PE=4 SV=1)

HSP 1 Score: 407.9 bits (1047), Expect = 3.4e-110
Identity = 225/291 (77.32%), Postives = 247/291 (84.88%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPT-----RSSRPALNHDIFRSWNGKQIHLRD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60

Query: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DEAVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKS+KET ALVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSKKETSALVGRSSWNMENGGLYL 180

Query: 181 KMGFPKSIGTTTRKKKKK--NDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYG 240
           KMGFP SIGT T+KKKKK  NDS LN +AKVSPKP   VEKDWWKRRLSVSSE+ S++Y 
Sbjct: 181 KMGFPNSIGTRTKKKKKKKNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 SNVNNGSIKSSSSSS---SNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
           S+VNNGSIKSSSSSS   SNGSNKNRTKS+GR A  GCWS IYPK +ERDE
Sbjct: 241 SSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHAYRGCWSCIYPKCNERDE 288

[Close]

BLAST of CSPI06G20540 vs. NCBI nr
Match: XP_004146783.1 (uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical protein Csa_004242 [Cucumis sativus])

HSP 1 Score: 545.4 bits (1404), Expect = 2.8e-151
Identity = 277/279 (99.28%), Postives = 279/279 (100.00%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE 60
           MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE
Sbjct: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPTRSSRPALNHDIFRSWNGKQIHLRDDHPFE 60

Query: 61  YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ 120
           YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ
Sbjct: 61  YGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQ 120

Query: 121 PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS 180
           PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS
Sbjct: 121 PMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFPKS 180

Query: 181 IGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK 240
           IGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK
Sbjct: 181 IGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGSIK 240

Query: 241 SSSSSSSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
           SSSSSSS+GSNKNRTKSTGRRANGGCWSWIYPKYHERDE
Sbjct: 241 SSSSSSSDGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 279

[Close]

BLAST of CSPI06G20540 vs. NCBI nr
Match: XP_008466690.1 (PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo])

HSP 1 Score: 523.9 bits (1348), Expect = 8.8e-145
Identity = 268/281 (95.37%), Postives = 275/281 (97.86%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGS 240
           KSIGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNGS
Sbjct: 181 KSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGS 240

Query: 241 IKSSSSSSSNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
           IKSSSSSSSNGSNK+RTKSTGRRA GGCWSWIYPKYHERDE
Sbjct: 241 IKSSSSSSSNGSNKSRTKSTGRRAKGGCWSWIYPKYHERDE 281

[Close]

BLAST of CSPI06G20540 vs. NCBI nr
Match: KAA0059829.1 (putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa] >TYK24788.1 putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa])

HSP 1 Score: 479.2 bits (1232), Expect = 2.5e-131
Identity = 250/262 (95.42%), Postives = 257/262 (98.09%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS--SPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60
           MIG+ RKLLSSPTESPDFRALNTTMEFS  SPTRSSRPALNHDIFRSWNGKQIHLRDDHP
Sbjct: 1   MIGTARKLLSSPTESPDFRALNTTMEFSSPSPTRSSRPALNHDIFRSWNGKQIHLRDDHP 60

Query: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120
           FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV
Sbjct: 61  FEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLV 120

Query: 121 EQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMGFP 180
           EQPMV+GQREDTGVDE+DS LGG REVFSRENRKSRKETRALVGR+SMENEGLYLKMGFP
Sbjct: 121 EQPMVVGQREDTGVDERDSNLGGHREVFSRENRKSRKETRALVGRSSMENEGLYLKMGFP 180

Query: 181 KSIGTTTRKKKKKNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSNVNNGS 240
           KSIGTTTRKKKKKNDSSLNM+AKVSPKPPQLVEKDWWKRRLSVSSESES+SYGSNVNNGS
Sbjct: 181 KSIGTTTRKKKKKNDSSLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESVSYGSNVNNGS 240

Query: 241 IKSSSSSSSNGSNKNRTKSTGR 261
           IKSSSSSSSNGSNK+RTKSTGR
Sbjct: 241 IKSSSSSSSNGSNKSRTKSTGR 262

[Close]

BLAST of CSPI06G20540 vs. NCBI nr
Match: XP_038883973.1 (uncharacterized protein LOC120074937 [Benincasa hispida])

HSP 1 Score: 448.7 bits (1153), Expect = 3.6e-122
Identity = 242/289 (83.74%), Postives = 258/289 (89.27%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFS----SPTRSSRPALNHDIFRSWNGKQIHLRDD 60
           MIGS+RKLL+SPTESPDFRA N  MEF+    SPTRSSRPALNHDIFRSWNGKQIHLRDD
Sbjct: 1   MIGSSRKLLASPTESPDFRAFN-AMEFASPSPSPTRSSRPALNHDIFRSWNGKQIHLRDD 60

Query: 61  HPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRD 120
            P EYGFRLTSPQRSPQFYRSNY +LSPPSKALAIATGQ+ELME+VNNMPESCYELSLRD
Sbjct: 61  PPLEYGFRLTSPQRSPQFYRSNYQSLSPPSKALAIATGQRELMEMVNNMPESCYELSLRD 120

Query: 121 LVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTSMENEGLYLKMG 180
           LVEQPM LG+RE+ GV+E+D  LGGDREVFSRENRKS+KETRALVG+ SMEN GLYLKMG
Sbjct: 121 LVEQPMGLGEREEAGVNERDCNLGGDREVFSRENRKSKKETRALVGK-SMENGGLYLKMG 180

Query: 181 FPKSIGTTTRKKKK---KNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYGSN 240
            PKSI TTT KKKK   KNDS LNM+AKVSPKPPQLVEKDWWKRRLSVSSESES +YGS 
Sbjct: 181 LPKSIVTTTTKKKKKKNKNDSGLNMSAKVSPKPPQLVEKDWWKRRLSVSSESESFAYGSC 240

Query: 241 VNNGSIKSSSSSSSNGSN--KNRTKSTGRRAN-GGCWSWIYPKYHERDE 280
           +NNGSIKSSSSSSSNGSN   NRTK+TGR AN GGCWSWIYPKYHE DE
Sbjct: 241 INNGSIKSSSSSSSNGSNGSNNRTKATGRHANSGGCWSWIYPKYHEGDE 287

[Close]

BLAST of CSPI06G20540 vs. NCBI nr
Match: XP_023536601.1 (uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 416.8 bits (1070), Expect = 1.5e-112
Identity = 228/291 (78.35%), Postives = 249/291 (85.57%), Query Frame = 0


Query: 1   MIGSTRKLLSSPTESPDFRALNTTMEFSSPT-----RSSRPALNHDIFRSWNGKQIHLRD 60
           M+GS+RKLLSSPTESPDFRA +  M+F SP       SSRPALNHDIFRSWNGKQIHL+D
Sbjct: 1   MLGSSRKLLSSPTESPDFRAFD-AMDFGSPASTRSRSSSRPALNHDIFRSWNGKQIHLKD 60

Query: 61  DHPFEYGFRLTSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLR 120
           D   EYGFRL+SPQRSPQFYRSNY +LSPPSKALAIATGQKELME+VNNMPESCYELSLR
Sbjct: 61  DETVEYGFRLSSPQRSPQFYRSNYQSLSPPSKALAIATGQKELMELVNNMPESCYELSLR 120

Query: 121 DLVEQPMVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRTS--MENEGLYL 180
           DLVEQPMVLGQ+E TG +E+D   GGDREVF+ ENRKSRKET ALVGR+S  MEN GLYL
Sbjct: 121 DLVEQPMVLGQQEPTGANERDK--GGDREVFAMENRKSRKETSALVGRSSWNMENGGLYL 180

Query: 181 KMGFPKSIGTTTRKKKK--KNDSSLNMTAKVSPKPPQLVEKDWWKRRLSVSSESESLSYG 240
           KMGFP SIGT T+KKKK   NDS LN +AKVSPKP   VEKDWWKRRLSVSSE+ S++Y 
Sbjct: 181 KMGFPNSIGTRTKKKKKNNNNDSGLNTSAKVSPKPSHPVEKDWWKRRLSVSSETGSVAYD 240

Query: 241 SNVNNGSIKSSSSSS---SNGSNKNRTKSTGRRANGGCWSWIYPKYHERDE 280
           S+VNNGSIKSSSSSS   SNGSNKNRTKS+GR ANGGCWS IYPKY+ERDE
Sbjct: 241 SSVNNGSIKSSSSSSSNGSNGSNKNRTKSSGRHANGGCWSCIYPKYNERDE 288

[Close]

BLAST of CSPI06G20540 vs. TAIR 10
Match: AT1G76980.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 61 Blast hits to 61 proteins in 18 species: Archae - 0; Bacteria - 8; Metazoa - 8; Fungi - 2; Plants - 40; Viruses - 3; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 113.6 bits (283), Expect = 2.5e-25
Identity = 90/226 (39.82%), Postives = 127/226 (56.19%), Query Frame = 0


Query: 66  TSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLG 125
           TSP +SP    +NY  LSP +KA  IA GQ+ELM++V+ MPESCYELSL+DLVE    + 
Sbjct: 37  TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96

Query: 126 QREDTGVDEKDSYLGGDREVFSRENRKSRKETRA-LVGRTSMENEGLYLKMGFPKSIGT- 185
             E+   DE        R+V     RK++ +     +    + N G  LK+ FP S+G  
Sbjct: 97  TEEEKVFDEMPQREKKPRKVV----RKTKSDKWVDPIRNGGVNNSGFLLKLVFPVSLGAK 156

Query: 186 -TTRKKKKKNDSSLNMTAK----VSPKPP------QLVEKDWWKRRLSVSSESESLSYGS 245
             T KKK  +D   ++T+K     SP+P       +  +KDWWK  LS S  S+S+   S
Sbjct: 157 KKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSVV--S 216

Query: 246 NVNNGSIKSSSSSSSNGSNKNRTKSTGRRANGGCWSWIYPKYHERD 279
            +N+GS KSS  SSS  SN +R++++ R  N GC S+++   H RD
Sbjct: 217 RINSGSSKSSGGSSSR-SNSDRSRNSLRDENRGCLSFLW-NVHPRD 250

[Close]

BLAST of CSPI06G20540 vs. TAIR 10
Match: AT1G76980.1 (BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G21390.1); Has 65 Blast hits to 65 proteins in 23 species: Archae - 0; Bacteria - 8; Metazoa - 1; Fungi - 8; Plants - 40; Viruses - 3; Other Eukaryotes - 5 (source: NCBI BLink). )

HSP 1 Score: 102.8 bits (255), Expect = 4.5e-22
Identity = 83/208 (39.90%), Postives = 117/208 (56.25%), Query Frame = 0


Query: 66  TSPQRSPQFYRSNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQPMVLG 125
           TSP +SP    +NY  LSP +KA  IA GQ+ELM++V+ MPESCYELSL+DLVE    + 
Sbjct: 37  TSPPKSPAHLHNNYQNLSPVTKAQVIARGQRELMDMVSKMPESCYELSLKDLVE----VN 96

Query: 126 QREDTGVDEKDSYLGGDREVFSRENRKSRKETRA-LVGRTSMENEGLYLKMGFPKSIGT- 185
             E+   DE        R+V     RK++ +     +    + N G  LK+ FP S+G  
Sbjct: 97  TEEEKVFDEMPQREKKPRKVV----RKTKSDKWVDPIRNGGVNNSGFLLKLVFPVSLGAK 156

Query: 186 -TTRKKKKKNDSSLNMTAK----VSPKPP------QLVEKDWWKRRLSVSSESESLSYGS 245
             T KKK  +D   ++T+K     SP+P       +  +KDWWK  LS S  S+S+   S
Sbjct: 157 KKTNKKKDNDDDDSSVTSKRSWISSPRPSISDLSMKREDKDWWKDGLSESRRSQSVV--S 216

Query: 246 NVNNGSIKSSSSSSSNGSNKNRTKSTGR 261
            +N+GS KSS  SSS  SN +R++++ R
Sbjct: 217 RINSGSSKSSGGSSSR-SNSDRSRNSLR 233

[Close]

BLAST of CSPI06G20540 vs. TAIR 10
Match: AT1G21390.1 (embryo defective 2170 )

HSP 1 Score: 98.2 bits (243), Expect = 1.1e-20
Identity = 80/194 (41.24%), Postives = 109/194 (56.19%), Query Frame = 0


Query: 63  FRLTSPQRSPQFYR-SNYHTLSPPSKALAIATGQKELMEIVNNMPESCYELSLRDLVEQP 122
           +R + P+  P F+R  +Y +LSP SKA AIA GQ+ELME+V+ MPESCYELSL+DLVE  
Sbjct: 35  WRTSPPKSPPPFHRPEDYWSLSPDSKAQAIARGQRELMEMVSKMPESCYELSLKDLVE-V 94

Query: 123 MVLGQREDTGVDEKDSYLGGDREVFSRENRKSRKETRALVGRT-SMENEGLYLKMGFPKS 182
            V  + E    DE         +V     RK++ + R    R+    N G  LK+ F  S
Sbjct: 95  KVNQENERKVFDELPKRANRQSKVV----RKTKSDKRVDPNRSGGGNNSGFLLKIMFLVS 154

Query: 183 IG----TTTRKKKKKNDSSLNMTAKVSPKPP------QLVEKDWWKRRLSVSSESESLSY 242
           +G    TT +KKKKK D +     KVSP+P       ++ +K+WW R     SES +   
Sbjct: 155 LGAMKDTTKKKKKKKKDEA----CKVSPRPSISEETVKVEDKEWWNR----MSESSTKRS 214

Query: 243 GSNVNNGSIKSSSS 245
           GS+ +N SI+S SS
Sbjct: 215 GSSSSNNSIRSRSS 215

The following BLAST results are available for this feature:

BLAST of CSPI06G20540 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G20540 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A1S4E6L8	4.2e-145	95.37	uncharacterized protein LOC103504041 OS=Cucumis melo OX=3656 GN=LOC103504041 PE=...	[more]
A0A0A0KH64	1.5e-137	97.37	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G397170 PE=4 SV=1	[more]
A0A5A7V1Z3	1.2e-131	95.42	Putative serine/threonine-protein kinase ndrD OS=Cucumis melo var. makuwa OX=119...	[more]
A0A6J1IJ72	6.8e-111	77.59	uncharacterized protein LOC111473911 OS=Cucurbita maxima OX=3661 GN=LOC111473911...	[more]
A0A6J1F9W6	3.4e-110	77.32	uncharacterized protein LOC111443607 OS=Cucurbita moschata OX=3662 GN=LOC1114436...	[more]

BLAST of CSPI06G20540 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004146783.1	2.8e-151	99.28	uncharacterized protein LOC101215856 [Cucumis sativus] >KGN47988.2 hypothetical ...	[more]
XP_008466690.1	8.8e-145	95.37	PREDICTED: uncharacterized protein LOC103504041 [Cucumis melo] >XP_016903625.1 P...	[more]
KAA0059829.1	2.5e-131	95.42	putative serine/threonine-protein kinase ndrD [Cucumis melo var. makuwa] >TYK247...	[more]
XP_038883973.1	3.6e-122	83.74	uncharacterized protein LOC120074937 [Benincasa hispida]	[more]
XP_023536601.1	1.5e-112	78.35	uncharacterized protein LOC111797724 [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G20540 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76980.2	2.5e-25	39.82	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT1G76980.1	4.5e-22	39.90	BEST Arabidopsis thaliana protein match is: embryo defective 2170 (TAIR:AT1G2139...	[more]
AT1G21390.1	1.1e-20	41.24	embryo defective 2170	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..266
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 182..209
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..34
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 226..262
None	No IPR available	PANTHER	PTHR34193:SF1	OS11G0199801 PROTEIN	coord: 9..273
None	No IPR available	PANTHER	PTHR34193	OS11G0199801 PROTEIN	coord: 9..273

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G20540.1	CSPI06G20540.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016310	phosphorylation
molecular_function	GO:0016301	kinase activity