CSPI06G19300 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G19300
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionTranscription and mRNA export factor ENY2
LocationChr6: 17463622 .. 17466457 (-)
RNA-Seq ExpressionCSPI06G19300
SyntenyCSPI06G19300
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TCGTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAATATTTGTCAAGAACAATCTCTAACCATAATATTTGATAATTGAATGTAAGTCTCTCCTAAGTCAGATTTCTGGTCGTCTTTCATCAGATCATCACTTTACCAAATTGAAATTTTCGCATCGATGGGGCTAATTCTTGAAGCTTCAATCCGTGGCTATAATTGCCATGCCCTAATTTCTGCTGCGACAGGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGGTCTGCAGTTTATTCGGTTCGTTTGTCTTTTTTTCTTTATGATTTTGATTGGATTTCTTCCTGGACAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGTTCCGCTCTCCTCTGTATTCATTAAATTCATGTATCGATTTAGTGTTTCTGTTGTTTTTCTACAAATGTTTGATCATTTCCTGTACCGTATTAGTCACTAATTAACGAGTAATTGCTGAAAGAAAAACGCTAGAGGGCGTGGCTTGATGTGTAAAGGTTGCATTGAAATTAATTCAAACGGAACATTAGAACTGATGCAGTTCTAGTTTTGTCTATGGGTCTTTCATTAACAGTCCTGGAAGTGGAGATTTGCTACATGATCCTATCAATTCTTTCATTCCAAGGCTAAGACTTTTGAATCTCCCTGTTGTTTCTCTAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGGTTCGTTCTCACTTTCCATTTTAGAAGTGGTTGCTATTGGTTGCACTTATCATAAACTTCTGATACGTTATCATTTGACTGCTTTTGCTGCTGAAAGGATCCTTGATATGCTACACCCTCTAACAATTGTTACATATGATGCAAGAAAACTTCACGTTTATGTATCCTAGAAAGGCTTATAGTTTACGTACTTTTATGACACAAGATGAGGTGCAACCAACTCTATCTGTATACAAACCCAATTATATTCTGTCCTGCATTTGTAAGCCTGTGAGATTCATGTGCTCACCACATTCCTCACAGTTATTATCCTGTATGCTTAAAGTATGGTGATTTGGAGTAATCAAATTAGAGGACCCACGTGCCAATGTATGAGAGATTATCGGGGGATTTAATATAGGTCTAGGGGGCTCAAGCCTCCCTCAACATTGTGTTCTTTATGTATATACATAACTGTAACTATACCAATACCATATTTAACCCAGTGATAAAAATGTCATCCAGCCCCTCTAGACCCCAGTTCAAACCCCACTGCTTGCATTTTTTTTCAGATTATTTTTACCGAATTACGAAGCCCCCATAAAAAAAATTTGGATCCACAGCTGTATGAGTTCATAGCTATCAACCCAATATAAAAAGTCAATAACATTTGAAGAATTCCTTTACATCAAATCAAATTATAAGGAGTCAAATCGGATGTTATGACTCAGAGAATGATTGATAATTAGAAAATATATTGAGTAAAATTTTTTGCCCAAAACAATAGAACCGATGAGTTATGCTTGCTTGATAGAAAGTAGTCATGAACTATTCAAAGCTCATGCAAATTTCATTTCTTATAAATTGTTAAGGTGAATTCTTGTTATATATGTAGTGTGTATTCGTATGTGTGTCATTGTTGAGGAATATTCTGAATACGAGTCAGTAAGAACTTGGAAAAAACTCACTTTTACTCCTGGCGAAGTTTGATTTTCACACTCTTCCAAAGCACCAAGCTTAACACAATGGAGAAAGAATTGAAGTCATCAAGGGGTTTTCATTGGTTCTCATGAGGGACACCCTCAAAAATTTAAACTTGCATCCATTATGTTACAAAGGATAATGTGTTTTTAAACTGCACCTAAAGAATCAACCACAAGAGGAGACTTTCCATAGCCATTTACCAATTAAACGTCCATAGTCCATTATGTTCCGGTCGATTTATGTGTTGTTCACGTTTAAAATTTTTTCTTATGAAGGTGAATTGCTCGCCACGATAAAATGTACTTGCCATGACATTAACTTTTCTTGTCCTTTTTCTGTACTCCGACTCTAGAGTTGTTTTGATGACTTGCATATCTAGTCATAATCTTATCTCATTCAACCATTCAACTGTGCTTCTGGTTATAGCCAAACTCGTTGCTGACTTTAGTTCAAATGATGTCGTGTAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAACATACACAAGATGACTGCAAGCTGCAGAAAAGTATCAACTTCATATCCTTACCAAACCCGCTAAAACCAATTAATCTATACCTTATATAATGAATTTGTTGGACTTATCAAATTTTATCGATTCTGTTGGAGAATCCAAGTCAAGTTCCGTTTTCAGGTTACGAAGGATGTAGCATTGTGTAAGCTCGTAGTCAACAACAACCGGGTTTGTGAGTGTTTTTGTTGTAGAATATGCATGTAAAAAGCTAGCTGTATGAGCTTTATAAAATACTCTCTAACTCTCATGATAACAAGTCTGTTTTTACTGAAAATTTGGTCAATTGTAACTCTTGATTGGGTCTACTTTGATGGTATATTATATATCTTGGATCTGTTCCATTCTTACTTTATTTACTATATATTGGGCGTGGGAATCAAACCTCTGACTTTGA

mRNA sequence

TCGTCGTCTCCAGTCAGCTGTTCCTCGCGGTGTAGTTGGACGCGCTGTGTCGCCGTGAAAGTGAATATTTGTCAAGAACAATCTCTAACCATAATATTTGATAATTGAATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAACATACACAAGATGACTGCAAGCTGCAGAAAAGTATCAACTTCATATCCTTACCAAACCCGCTAAAACCAATTAATCTATACCTTATATAATGAATTTGTTGGACTTATCAAATTTTATCGATTCTGTTGGAGAATCCAAGTCAAGTTCCGTTTTCAGGTTACGAAGGATGTAGCATTGTGTAAGCTCGTAGTCAACAACAACCGGGTTTGTGAGTGTTTTTGTTGTAGAATATGCATGTAAAAAGCTAGCTGTATGAGCTTTATAAAATACTCTCTAACTCTCATGATAACAAGTCTGTTTTTACTGAAAATTTGGTCAATTGTAACTCTTGATTGGGTCTACTTTGATGGTATATTATATATCTTGGATCTGTTCCATTCTTACTTTATTTACTATATATTGGGCGTGGGAATCAAACCTCTGACTTTGA

Coding sequence (CDS)

ATGAGGGCTTCTATTAATCGGCCTCCGACGCCTGAACCGGAGGATGATCGAGAACACCAACCCACTTTTCAAGAATCAATCAACATCAAGCTGATTGAAAGTGGTGAGAAAGAGCGGCTGAAAGAGCTCTTGAGAGAGAGGCTCATTGAATGCGGCTGGAAAGATGAGATGAAAGCACTTTGCAGGGCATATGTAAGGAAGAAAGGAAGGAACAATGTCAGTGTTGATGACCTTGTGCAGGTCATTACTCCAAAAGGCAGAGCCTCAGTTCCAGATTCAGTGAAAGCCGAGCTGCTGCAGCGCATCCGATCTTTCCTTGGATCAACAGCCATCTAA

Protein sequence

MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI*
Homology
[Close]
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match: Q6NQ54 (Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 145.2 bits (365), Expect = 4.4e-34
Identity = 70/115 (60.87%), Postives = 94/115 (81.74%), Query Frame = 0 

Query: 1   MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
           M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1   MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61  MKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           M+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Sbjct: 61  MRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115

[Close]
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match: Q3ZBJ0 (Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRASVPDSVKAELLQRIRSFLGSTA 111
           GRA VPDSVK ELLQRIR+FL   A
Sbjct: 75  GRALVPDSVKKELLQRIRTFLAQHA 99

[Close]
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match: Q9NPA8 (Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRASVPDSVKAELLQRIRSFLGSTA 111
           GRA VPDSVK ELLQRIR+FL   A
Sbjct: 75  GRALVPDSVKKELLQRIRTFLAQHA 99

[Close]
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match: Q9JIX0 (Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 SV=1)

HSP 1 Score: 119.0 bits (297), Expect = 3.4e-26
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 15  AINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKEVIKEKGLEHVTVDDLVAEITPK 74

Query: 86  GRASVPDSVKAELLQRIRSFLGSTA 111
           GRA VPDSVK ELLQRIR+FL   A
Sbjct: 75  GRALVPDSVKKELLQRIRTFLAQHA 99

[Close]
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match: B5FZ63 (Transcription and mRNA export factor ENY2 OS=Taeniopygia guttata OX=59729 GN=ENY2 PE=3 SV=1)

HSP 1 Score: 118.6 bits (296), Expect = 4.4e-26
Identity = 58/85 (68.24%), Postives = 71/85 (83.53%), Query Frame = 0 

Query: 26  SINIKLIESGEKERLKELLRERLIECGWKDEMKALCRAYVRKKGRNNVSVDDLVQVITPK 85
           +IN KLIE+GE+ERLKELLR +LIECGWKD++KA C+  +++KG  +V+VDDLV  ITPK
Sbjct: 10  TINQKLIETGERERLKELLRAKLIECGWKDQLKAHCKDVIKEKGLEHVTVDDLVAEITPK 69

Query: 86  GRASVPDSVKAELLQRIRSFLGSTA 111
           GRA VPDSVK ELLQRIR+FL   A
Sbjct: 70  GRALVPDSVKKELLQRIRTFLAQHA 94

[Close]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match: A0A0A0KIM7 (Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G365120 PE=3 SV=1)

HSP 1 Score: 219.9 bits (559), Expect = 5.2e-54
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 111

[Close]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match: A0A1S3BDR5 (Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC103488502 PE=3 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.6e-53
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match: A0A6J1GGQ4 (Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC111454046 PE=3 SV=1)

HSP 1 Score: 211.8 bits (538), Expect = 1.4e-51
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match: A0A6J1KQ41 (Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC111496587 PE=3 SV=1)

HSP 1 Score: 210.7 bits (535), Expect = 3.2e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match: A0A6J1BSW0 (Transcription and mRNA export factor ENY2 OS=Momordica charantia OX=3673 GN=LOC111004543 PE=3 SV=1)

HSP 1 Score: 207.6 bits (527), Expect = 2.7e-50
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPE EDDR+ Q TFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEAEDDRDQQLTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 111

[Close]
BLAST of CSPI06G19300 vs. NCBI nr
Match: XP_011657386.1 (transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothetical protein Csa_019040 [Cucumis sativus])

HSP 1 Score: 219.9 bits (559), Expect = 1.1e-53
Identity = 111/111 (100.00%), Postives = 111/111 (100.00%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 111

[Close]
BLAST of CSPI06G19300 vs. NCBI nr
Match: XP_008445505.1 (PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo])

HSP 1 Score: 217.6 bits (553), Expect = 5.4e-53
Identity = 110/111 (99.10%), Postives = 110/111 (99.10%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. NCBI nr
Match: XP_038884208.1 (transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 transcription and mRNA export factor ENY2 [Benincasa hispida])

HSP 1 Score: 214.5 bits (545), Expect = 4.5e-52
Identity = 108/111 (97.30%), Postives = 109/111 (98.20%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MRASINRPPTPEPEDDREH PTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRASINRPPTPEPEDDREHHPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. NCBI nr
Match: XP_022951096.1 (transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 transcription and mRNA export factor SUS1 [Cucurbita moschata])

HSP 1 Score: 211.8 bits (538), Expect = 2.9e-51
Identity = 107/111 (96.40%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. NCBI nr
Match: XP_023002845.1 (transcription and mRNA export factor ENY2 [Cucurbita maxima] >XP_023002846.1 transcription and mRNA export factor ENY2 [Cucurbita maxima])

HSP 1 Score: 210.7 bits (535), Expect = 6.6e-51
Identity = 106/111 (95.50%), Postives = 108/111 (97.30%), Query Frame = 0 

Query: 1   MRASINRPPTPEPEDDREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60
           MR SINRPPTPEPEDDRE QPTFQE+INIKLIESGEKERLKELLRERLIECGWKDEMKAL
Sbjct: 1   MRTSINRPPTPEPEDDREQQPTFQETINIKLIESGEKERLKELLRERLIECGWKDEMKAL 60

Query: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIR+FL STAI
Sbjct: 61  CRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRTFLASTAI 111

[Close]
BLAST of CSPI06G19300 vs. TAIR 10
Match: AT3G27100.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 288 Blast hits to 288 proteins in 94 species: Archae - 0; Bacteria - 0; Metazoa - 197; Fungi - 20; Plants - 51; Viruses - 0; Other Eukaryotes - 20 (source: NCBI BLink). )

HSP 1 Score: 145.2 bits (365), Expect = 3.2e-35
Identity = 70/115 (60.87%), Postives = 94/115 (81.74%), Query Frame = 0 

Query: 1   MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
           M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1   MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61  MKALCRAYVRKKGRNNVSVDDLVQVITPKGRASVPDSVKAELLQRIRSFLGSTAI 112
           M+  CR +V+KKGR +V+VD+L++VITPKGRASVPDSVKAELL RI++F+ S A+
Sbjct: 61  MRIACREHVKKKGRKDVTVDELIRVITPKGRASVPDSVKAELLNRIQNFIVSAAL 115

[Close]
BLAST of CSPI06G19300 vs. TAIR 10
Match: AT3G27100.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Transcription factor, enhancer of yellow 2 (InterPro:IPR018783); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 114.4 bits (285), Expect = 6.0e-26
Identity = 53/94 (56.38%), Postives = 74/94 (78.72%), Query Frame = 0 

Query: 1  MRASINRPPTPEPED----DREHQPTFQESINIKLIESGEKERLKELLRERLIECGWKDE 60
          M+ S+NRPPTP+ +D      + + T +E IN+KL+ESGEKE L EL+R+RL+ECGWKDE
Sbjct: 1  MKHSVNRPPTPDEDDVADGFEKDKVTLREIINVKLVESGEKENLMELVRDRLVECGWKDE 60

Query: 61 MKALCRAYVRKKGRNNVSVDDLVQVITPKGRASV 91
          M+  CR +V+KKGR +V+VD+L++VITPKGR  +
Sbjct: 61 MRIACREHVKKKGRKDVTVDELIRVITPKGRGKI 94

The following BLAST results are available for this feature:
BLAST of CSPI06G19300 vs. ExPASy Swiss-Prot
Match NameE-valueIdentityDescription
Q6NQ544.4e-3460.87Transcription and mRNA export factor ENY2 OS=Arabidopsis thaliana OX=3702 GN=ENY... [more]
Q3ZBJ03.4e-2668.24Transcription and mRNA export factor ENY2 OS=Bos taurus OX=9913 GN=ENY2 PE=3 SV=... [more]
Q9NPA83.4e-2668.24Transcription and mRNA export factor ENY2 OS=Homo sapiens OX=9606 GN=ENY2 PE=1 S... [more]
Q9JIX03.4e-2668.24Transcription and mRNA export factor ENY2 OS=Mus musculus OX=10090 GN=Eny2 PE=1 ... [more]
B5FZ634.4e-2668.24Transcription and mRNA export factor ENY2 OS=Taeniopygia guttata OX=59729 GN=ENY... [more]
BLAST of CSPI06G19300 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KIM75.2e-54100.00Transcription and mRNA export factor ENY2 OS=Cucumis sativus OX=3659 GN=Csa_6G36... [more]
A0A1S3BDR52.6e-5399.10Transcription and mRNA export factor ENY2 OS=Cucumis melo OX=3656 GN=LOC10348850... [more]
A0A6J1GGQ41.4e-5196.40Transcription and mRNA export factor ENY2 OS=Cucurbita moschata OX=3662 GN=LOC11... [more]
A0A6J1KQ413.2e-5195.50Transcription and mRNA export factor ENY2 OS=Cucurbita maxima OX=3661 GN=LOC1114... [more]
A0A6J1BSW02.7e-5095.50Transcription and mRNA export factor ENY2 OS=Momordica charantia OX=3673 GN=LOC1... [more]
BLAST of CSPI06G19300 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_011657386.11.1e-53100.00transcription and mRNA export factor ENY2 [Cucumis sativus] >KGN47611.1 hypothet... [more]
XP_008445505.15.4e-5399.10PREDICTED: transcription and mRNA export factor SUS1 isoform X2 [Cucumis melo][more]
XP_038884208.14.5e-5297.30transcription and mRNA export factor ENY2 [Benincasa hispida] >XP_038884209.1 tr... [more]
XP_022951096.12.9e-5196.40transcription and mRNA export factor SUS1 [Cucurbita moschata] >XP_022951097.1 t... [more]
XP_023002845.16.6e-5195.50transcription and mRNA export factor ENY2 [Cucurbita maxima] >XP_023002846.1 tra... [more]
BLAST of CSPI06G19300 vs. TAIR 10
Match NameE-valueIdentityDescription
AT3G27100.13.2e-3560.87FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
AT3G27100.26.0e-2656.38FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow... [more]
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038212Transcription factor EnY2 superfamilyGENE3D1.10.246.140coord: 7..90
e-value: 3.1E-35
score: 122.4
IPR018783Transcription factor, enhancer of yellow 2PFAMPF10163EnY2coord: 10..86
e-value: 3.6E-32
score: 110.6
IPR018783Transcription factor, enhancer of yellow 2PANTHERPTHR12514ENHANCER OF YELLOW 2 TRANSCRIPTION FACTORcoord: 10..90
IPR018783Transcription factor, enhancer of yellow 2HAMAPMF_03046ENY2_Sus1coord: 2..89
score: 20.014
NoneNo IPR availablePANTHERPTHR12514:SF3TRANSCRIPTION AND MRNA EXPORT FACTOR ENY2coord: 10..90

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G19300.1CSPI06G19300.1mRNA
CSPI06G19300.2CSPI06G19300.2mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006325 chromatin organization
biological_process GO:0016578 histone deubiquitination
biological_process GO:0016973 poly(A)+ mRNA export from nucleus
biological_process GO:0045893 positive regulation of transcription, DNA-templated
biological_process GO:0015031 protein transport
biological_process GO:0006357 regulation of transcription by RNA polymerase II
biological_process GO:0006368 transcription elongation from RNA polymerase II promoter
biological_process GO:0006406 mRNA export from nucleus
cellular_component GO:0071819 DUBm complex
cellular_component GO:0005643 nuclear pore
cellular_component GO:0000124 SAGA complex
cellular_component GO:0070390 transcription export complex 2
molecular_function GO:0003682 chromatin binding
molecular_function GO:0003713 transcription coactivator activity