CSPI06G18450 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G18450
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	increased DNA methylation 3-like
Location	Chr6: 16809427 .. 16810020 (+)
RNA-Seq Expression	CSPI06G18450
Synteny	CSPI06G18450

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAAGGCAATGGTGATCAGACGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTTCGTGTTGCATTGCCTGGCGTGCGAAAAGATCGAAGTAAGCCTTTGTGTTCGCCTTATTTTTCTATCAATCTAGCATCTGCATAGATTTAATAATCCTGCTTGTTCCTATGAAAAACTAATTCTGGGACCAATCCATTATACCACGTGTTTGCTTATTCAAGAGATAACCAATTGGACAAATCTTCAGGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAAGGTTCAGATCGAAGGAGTGATGTCAGGTCCAGGTTTCTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGTCCACCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGTCCGGTTGATCCACGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTTTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCTGATTCCCAACCACCACTGGGAGTATAA

mRNA sequence

ATGGAAGGCAATGGTGATCAGACGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTTCGTGTTGCATTGCCTGGCGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAAGGTTCAGATCGAAGGAGTGATGTCAGGTCCAGGTTTCTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGTCCACCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGTCCGGTTGATCCACGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTTTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCTGATTCCCAACCACCACTGGGAGTATAA

Coding sequence (CDS)

ATGGAAGGCAATGGTGATCAGACGATGCTGAAGCCATCAGTTATTTTAACTGGAACAGCCAAGGAAGGTAGTTCTGGCCCTCCTATTGGTCTTGTTGATATTGGCGTGAGTGAAGGTGCATACCTCTTTCGTGTTGCATTGCCTGGCGTGCGAAAAGATCGAAGTAAGGTAAAATTTGAGATCAAAAGCGATGGTAAGGTTCAGATCGAAGGAGTGATGTCAGGTCCAGGTTTCTTAAAAGAATCATCAGCTATGTACCAGATGAAAGTCCAGCAACTTTGTCCACCAGGACCTTTTACGGTTTCTTTTAAGCTGCCTGGTCCGGTTGATCCACGGTTGTCTTCGCCTAGTTTCCGGCCTGATGGCATTTTGGAAGTGGTGGTTATGAAGTCCAGAGCACAACCTACAGTGGCTGATTCCCAACCACCACTGGGAGTATAA

Protein sequence

MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMKSRAQPTVADSQPPLGV*

Homology

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BLAST of CSPI06G18450 vs. ExPASy Swiss-Prot
Match: Q9SYQ0 (Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1)

HSP 1 Score: 134.8 bits (338), Expect = 7.9e-31
Identity = 65/123 (52.85%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 11  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIE 70
           +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 71  G-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 130
           G    G   +K  S +++M +++LCPPGPF + F LPGPVDPRL SP+FR DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 131 KSR 133
           + +
Sbjct: 459 RHK 461

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BLAST of CSPI06G18450 vs. ExPASy Swiss-Prot
Match: Q8RWL4 (Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1)

HSP 1 Score: 107.8 bits (268), Expect = 1.0e-22
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 3   GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIK 62
           G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 63  SDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPD 122
            +GKV + GV  +G   +K  S +++M+ + LCPPG F+VSF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 123 GILEVVVMKSRAQPTV 138
           GILE VVMK+  + TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

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BLAST of CSPI06G18450 vs. ExPASy Swiss-Prot
Match: Q84K79 (Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 GN=ACD22.3 PE=1 SV=1)

HSP 1 Score: 107.1 bits (266), Expect = 1.8e-22
Identity = 57/121 (47.11%), Postives = 77/121 (63.64%), Query Frame = 0


Query: 11  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIE 70
           K  V LTG+A  G  G  IGLVDI  SE +Y FRVALPGV +D  +   EI+ DGK+ I+
Sbjct: 81  KTGVALTGSAAMGKIGLTIGLVDIAESEDSYYFRVALPGVSRDEKEFSCEIEPDGKIMIK 140

Query: 71  G-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 130
           G   +G   + + + +++M  Q LCPPG FT++F+LPGPV     + +F  DG+LE VV 
Sbjct: 141 GATTTGEQTVCKHNQIFKMLTQNLCPPGHFTINFQLPGPVSNEEFNGNFGSDGVLEGVVK 200

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BLAST of CSPI06G18450 vs. ExPASy TrEMBL
Match: A0A0A0KDF2 (SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G355370 PE=3 SV=1)

HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPLGV 147
           DGILEVVVMKSRAQPTVADSQPPLGV
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPLGV 146

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BLAST of CSPI06G18450 vs. ExPASy TrEMBL
Match: A0A1S3CMV5 (increased DNA methylation 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502607 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPLGV 147
           DGILEVVVMKSRAQPTVADSQPPL V
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPLVV 146

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BLAST of CSPI06G18450 vs. ExPASy TrEMBL
Match: A0A5D3CM92 (Increased DNA methylation 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold807G00020 PE=3 SV=1)

HSP 1 Score: 288.9 bits (738), Expect = 1.2e-74
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPLGV 147
           DGILEVVVMKSRAQPTVADSQPPL V
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPLVV 146

[Close]

BLAST of CSPI06G18450 vs. ExPASy TrEMBL
Match: A0A1S3CMB7 (increased DNA methylation 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502607 PE=3 SV=1)

HSP 1 Score: 282.0 bits (720), Expect = 1.5e-72
Identity = 144/150 (96.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----K 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    K
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRNESSGK 60

Query: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120
           VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP
Sbjct: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120

Query: 121 SFRPDGILEVVVMKSRAQPTVADSQPPLGV 147
           SFRPDGILEVVVMKSRAQPTVADSQPPL V
Sbjct: 121 SFRPDGILEVVVMKSRAQPTVADSQPPLVV 150

[Close]

BLAST of CSPI06G18450 vs. ExPASy TrEMBL
Match: A0A6J1GI33 (increased DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454130 PE=3 SV=1)

HSP 1 Score: 263.5 bits (672), Expect = 5.4e-67
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 3   MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 62

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSPSFRP
Sbjct: 63  IKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRP 122

Query: 121 DGILEVVVMKSRAQPTVADSQPP 144
           DGILEVVVMKSRA PTVADS PP
Sbjct: 123 DGILEVVVMKSRAPPTVADSHPP 145

[Close]

BLAST of CSPI06G18450 vs. NCBI nr
Match: XP_004144249.1 (increased DNA methylation 3 [Cucumis sativus] >XP_004144250.1 increased DNA methylation 3 [Cucumis sativus] >XP_011657329.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742703.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742704.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742705.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742706.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742707.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742708.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742709.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742710.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742711.1 increased DNA methylation 3 [Cucumis sativus] >XP_031742712.1 increased DNA methylation 3 [Cucumis sativus] >KGN47518.1 hypothetical protein Csa_018965 [Cucumis sativus])

HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75
Identity = 146/146 (100.00%), Postives = 146/146 (100.00%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPLGV 147
           DGILEVVVMKSRAQPTVADSQPPLGV
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPLGV 146

[Close]

BLAST of CSPI06G18450 vs. NCBI nr
Match: XP_008464812.1 (PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464813.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464815.1 PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >KAA0045408.1 increased DNA methylation 3 isoform X2 [Cucumis melo var. makuwa] >TYK11329.1 increased DNA methylation 3 isoform X2 [Cucumis melo var. makuwa])

HSP 1 Score: 288.9 bits (738), Expect = 2.5e-74
Identity = 145/146 (99.32%), Postives = 145/146 (99.32%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP
Sbjct: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPLGV 147
           DGILEVVVMKSRAQPTVADSQPPL V
Sbjct: 121 DGILEVVVMKSRAQPTVADSQPPLVV 146

[Close]

BLAST of CSPI06G18450 vs. NCBI nr
Match: XP_008464810.1 (PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo] >XP_008464811.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo] >XP_016903272.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo] >XP_016903273.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo] >XP_016903274.1 PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo])

HSP 1 Score: 282.0 bits (720), Expect = 3.0e-72
Identity = 144/150 (96.00%), Postives = 145/150 (96.67%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRS----K 60
           MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDR+    K
Sbjct: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRNESSGK 60

Query: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120
           VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP
Sbjct: 61  VKFEIKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSP 120

Query: 121 SFRPDGILEVVVMKSRAQPTVADSQPPLGV 147
           SFRPDGILEVVVMKSRAQPTVADSQPPL V
Sbjct: 121 SFRPDGILEVVVMKSRAQPTVADSQPPLVV 150

[Close]

BLAST of CSPI06G18450 vs. NCBI nr
Match: XP_038884247.1 (increased DNA methylation 3 [Benincasa hispida] >XP_038884248.1 increased DNA methylation 3 [Benincasa hispida] >XP_038884249.1 increased DNA methylation 3 [Benincasa hispida] >XP_038884250.1 increased DNA methylation 3 [Benincasa hispida] >XP_038884251.1 increased DNA methylation 3 [Benincasa hispida])

HSP 1 Score: 273.1 bits (697), Expect = 1.4e-69
Identity = 136/144 (94.44%), Postives = 139/144 (96.53%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEG+GDQT+ KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 1   MEGHGDQTLRKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDGKVQIEGVM+GPG LKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLS PSFRP
Sbjct: 61  IKSDGKVQIEGVMTGPGVLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSLPSFRP 120

Query: 121 DGILEVVVMKSRAQPTVADSQPPL 145
           DGILEVVVMKSRA PTVADS PPL
Sbjct: 121 DGILEVVVMKSRAHPTVADSHPPL 144

[Close]

BLAST of CSPI06G18450 vs. NCBI nr
Match: XP_022951227.1 (increased DNA methylation 3-like [Cucurbita moschata] >XP_022951228.1 increased DNA methylation 3-like [Cucurbita moschata] >XP_022951229.1 increased DNA methylation 3-like [Cucurbita moschata] >XP_022951230.1 increased DNA methylation 3-like [Cucurbita moschata] >XP_023538561.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023538562.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023538563.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023538564.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >XP_023538565.1 increased DNA methylation 3-like [Cucurbita pepo subsp. pepo] >KAG6585797.1 Increased DNA methylation 3, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 263.5 bits (672), Expect = 1.1e-66
Identity = 131/143 (91.61%), Postives = 135/143 (94.41%), Query Frame = 0


Query: 1   MEGNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 60
           MEG+GD   LKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE
Sbjct: 3   MEGHGDHMKLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFE 62

Query: 61  IKSDGKVQIEGVMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRP 120
           IKSDG+V IEGVM+GPG LK+SSAMYQMKVQQLCPPG FTVSFKLPGPVDPRLSSPSFRP
Sbjct: 63  IKSDGRVHIEGVMTGPGLLKDSSAMYQMKVQQLCPPGSFTVSFKLPGPVDPRLSSPSFRP 122

Query: 121 DGILEVVVMKSRAQPTVADSQPP 144
           DGILEVVVMKSRA PTVADS PP
Sbjct: 123 DGILEVVVMKSRAPPTVADSHPP 145

[Close]

BLAST of CSPI06G18450 vs. TAIR 10
Match: AT1G76440.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.4e-37
Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 14  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM 73
           V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 74  SGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMK 131
                  ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL SP+FR DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CSPI06G18450 vs. TAIR 10
Match: AT1G76440.2 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.4e-37
Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 14  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM 73
           V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 74  SGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMK 131
                  ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL SP+FR DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CSPI06G18450 vs. TAIR 10
Match: AT1G76440.3 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 152.1 bits (383), Expect = 3.4e-37
Identity = 72/117 (61.54%), Postives = 93/117 (79.49%), Query Frame = 0


Query: 14  VILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIEGVM 73
           V  TGTAK GS GPPIGLVDIGVSE AY+FRV+LPG+ K++ K+K EI+ +G+V I+GV+
Sbjct: 19  VFCTGTAKLGSVGPPIGLVDIGVSEVAYIFRVSLPGIEKNQDKIKCEIQREGRVCIQGVI 78

Query: 74  SGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVMK 131
                  ++  +Y+M+VQQLCPPGPF+++F LPG VDPRL SP+FR DGI EVVV+K
Sbjct: 79  PEIAIPSDTGCLYRMQVQQLCPPGPFSITFNLPGQVDPRLFSPNFRSDGIFEVVVVK 135

[Close]

BLAST of CSPI06G18450 vs. TAIR 10
Match: AT1G20870.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 134.8 bits (338), Expect = 5.6e-32
Identity = 65/123 (52.85%), Postives = 90/123 (73.17%), Query Frame = 0


Query: 11  KPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIKSDGKVQIE 70
           +PSV+ TGTA + + G  +G+VDIGV++ AY F+VALPGVRKD  +   EI+SDGKV +E
Sbjct: 339 EPSVVTTGTASKETLGSSVGVVDIGVNKVAYFFQVALPGVRKDYGEFSCEIESDGKVILE 398

Query: 71  G-VMSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPDGILEVVVM 130
           G    G   +K  S +++M +++LCPPGPF + F LPGPVDPRL SP+FR DGI E V++
Sbjct: 399 GSTTRGEKNIKRHSRVFEMNIRKLCPPGPFKLCFNLPGPVDPRLFSPNFRSDGIFEGVII 458

Query: 131 KSR 133
           + +
Sbjct: 459 RHK 461

[Close]

BLAST of CSPI06G18450 vs. TAIR 10
Match: AT1G54840.1 (HSP20-like chaperones superfamily protein )

HSP 1 Score: 107.8 bits (268), Expect = 7.3e-24
Identity = 60/136 (44.12%), Postives = 82/136 (60.29%), Query Frame = 0


Query: 3   GNGDQTMLKPSVILTGTAKEGSSGPPIGLVDIGVSEGAYLFRVALPGVRKDRSKVKFEIK 62
           G       KP V       E   G  +GL+DIG  + AYLFRV+LPGV++D      E++
Sbjct: 219 GEESDVAAKPEV-----KSEAHGGLMVGLMDIGECDDAYLFRVSLPGVKRDERYFSCEVE 278

Query: 63  SDGKVQIEGV-MSGPGFLKESSAMYQMKVQQLCPPGPFTVSFKLPGPVDPRLSSPSFRPD 122
            +GKV + GV  +G   +K  S +++M+ + LCPPG F+VSF+LPGPV P   S +F  D
Sbjct: 279 DNGKVLVRGVTTTGGKRVKRYSHVFEMQTRSLCPPGNFSVSFRLPGPVHPHEFSGNFGTD 338

Query: 123 GILEVVVMKSRAQPTV 138
           GILE VVMK+  + TV
Sbjct: 339 GILEGVVMKNLQKQTV 349

The following BLAST results are available for this feature:

BLAST of CSPI06G18450 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYQ0	7.9e-31	52.85	Increased DNA methylation 3 OS=Arabidopsis thaliana OX=3702 GN=IDM3 PE=1 SV=1	[more]
Q8RWL4	1.0e-22	44.12	Increased DNA methylation 2 OS=Arabidopsis thaliana OX=3702 GN=IDM2 PE=1 SV=1	[more]
Q84K79	1.8e-22	47.11	Alpha-crystallin domain-containing protein 22.3 OS=Arabidopsis thaliana OX=3702 ...	[more]

BLAST of CSPI06G18450 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDF2	1.1e-75	100.00	SHSP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G355370 PE=3 S...	[more]
A0A1S3CMV5	1.2e-74	99.32	increased DNA methylation 3 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103502607 P...	[more]
A0A5D3CM92	1.2e-74	99.32	Increased DNA methylation 3 isoform X2 OS=Cucumis melo var. makuwa OX=1194695 GN...	[more]
A0A1S3CMB7	1.5e-72	96.00	increased DNA methylation 3 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103502607 P...	[more]
A0A6J1GI33	5.4e-67	91.61	increased DNA methylation 3-like OS=Cucurbita moschata OX=3662 GN=LOC111454130 P...	[more]

BLAST of CSPI06G18450 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004144249.1	2.2e-75	100.00	increased DNA methylation 3 [Cucumis sativus] >XP_004144250.1 increased DNA meth...	[more]
XP_008464812.1	2.5e-74	99.32	PREDICTED: increased DNA methylation 3 isoform X2 [Cucumis melo] >XP_008464813.1...	[more]
XP_008464810.1	3.0e-72	96.00	PREDICTED: increased DNA methylation 3 isoform X1 [Cucumis melo] >XP_008464811.1...	[more]
XP_038884247.1	1.4e-69	94.44	increased DNA methylation 3 [Benincasa hispida] >XP_038884248.1 increased DNA me...	[more]
XP_022951227.1	1.1e-66	91.61	increased DNA methylation 3-like [Cucurbita moschata] >XP_022951228.1 increased ...	[more]

BLAST of CSPI06G18450 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G76440.1	3.4e-37	61.54	HSP20-like chaperones superfamily protein	[more]
AT1G76440.2	3.4e-37	61.54	HSP20-like chaperones superfamily protein	[more]
AT1G76440.3	3.4e-37	61.54	HSP20-like chaperones superfamily protein	[more]
AT1G20870.1	5.6e-32	52.85	HSP20-like chaperones superfamily protein	[more]
AT1G54840.1	7.3e-24	44.12	HSP20-like chaperones superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008978	HSP20-like chaperone	GENE3D	2.60.40.790		coord: 31..141 e-value: 7.7E-12 score: 47.0
IPR008978	HSP20-like chaperone	SUPERFAMILY	49764	HSP20-like chaperones	coord: 30..134
IPR039321	Increased DNA methylation 2/3-like	PANTHER	PTHR34661	INCREASED DNA METHYLATION 3	coord: 6..136
None	No IPR available	PANTHER	PTHR34661:SF2	INCREASED DNA METHYLATION 3-LIKE	coord: 6..136
None	No IPR available	CDD	cd06464	ACD_sHsps-like	coord: 33..130 e-value: 2.3262E-10 score: 51.7861
IPR002068	Alpha crystallin/Hsp20 domain	PROSITE	PS01031	SHSP	coord: 20..146 score: 12.150294

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G18450.1	CSPI06G18450.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:1901537	positive regulation of DNA demethylation
cellular_component	GO:0005634	nucleus