Homology
BLAST of CSPI06G18410 vs. ExPASy Swiss-Prot
Match:
P0C2F6 (Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1g65750 PE=3 SV=1)
HSP 1 Score: 80.1 bits (196), Expect = 7.0e-14
Identity = 38/106 (35.85%), Postives = 64/106 (60.38%), Query Frame = 0
Query: 116 WSETTEKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRN 175
+ E E++ +++ W+ +LS G++TL KA L+S P + + P+ + + + R
Sbjct: 13 FGEILERVSSRMSGWREKTLSFAGRLTLTKAVLSSMPVHSMSTILLPQSILNRLDQLSRT 72
Query: 176 FLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSKKG 222
FLW +T +KK +L+KWS + SP +GGLG+ +S N AL+SK G
Sbjct: 73 FLWGSTAEKKKQHLVKWSKVCSPKKEGGLGVRAAKSMNRALISKVG 118
BLAST of CSPI06G18410 vs. ExPASy Swiss-Prot
Match:
O00370 (LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1)
HSP 1 Score: 61.6 bits (148), Expect = 2.6e-08
Identity = 49/206 (23.79%), Postives = 96/206 (46.60%), Query Frame = 0
Query: 4 LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASG 63
L +L + ++ IKG+ GK + LFA D+++++E+ + N+ + F SG
Sbjct: 672 LEVLARAIRQEKEIKGIQL-GKEEVKLSLFADDMIVYLENPIVSAQNLLKLISNFSKVSG 731
Query: 64 LNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKL 123
IN+ KS N + Q + + + F++ I+YLG+ L + + + E + L
Sbjct: 732 YKINVQKSQAFLYNNNRQTESQIMGELPFTIASKRIKYLGIQL--TRDVKDLFKENYKPL 791
Query: 124 QRKI----NNWKYASLSKGGKITLIKATLAS--FPNYHILVFKPPKYVYKDIKTIWRNFL 183
++I N WK S G+I ++K + ++ + K P + +++ F+
Sbjct: 792 LKEIKEDTNKWKNIPCSWVGRINIVKMAILPKVIYRFNAIPIKLPMTFFTELEKTTLKFI 851
Query: 184 WRNTFDKKNINLIKWSTMLSPINKGG 204
W ++K + K ++LS NK G
Sbjct: 852 W----NQKRARIAK--SILSQKNKAG 868
BLAST of CSPI06G18410 vs. ExPASy Swiss-Prot
Match:
P11369 (LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2)
HSP 1 Score: 53.5 bits (127), Expect = 7.0e-06
Identity = 41/192 (21.35%), Postives = 84/192 (43.75%), Query Frame = 0
Query: 4 LSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASG 63
L +L + ++ IKG+ GK + L A D+++++ D + + + N + F G
Sbjct: 679 LEVLARAIRQQKEIKGIQI-GKEEVKISLLADDMIVYISDPKNSTRELLNLINSFGEVVG 738
Query: 64 LNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRH--FWSETTE 123
IN NKS + Q + FS+ I+YLGV L + + + +
Sbjct: 739 YKINSNKSMAFLYTKNKQAEKEIRETTPFSIVTNNIKYLGVTLTKEVKDLYDKNFKSLKK 798
Query: 124 KLQRKINNWKYASLSKGGKITLIKATL--ASFPNYHILVFKPPKYVYKDIKTIWRNFLWR 183
+++ + WK S G+I ++K + + ++ + K P + +++ F+W
Sbjct: 799 EIKEDLRRWKDLPCSWIGRINIVKMAILPKAIYRFNAIPIKIPTQFFNELEGAICKFVWN 858
Query: 184 NTFDKKNINLIK 192
N + +L+K
Sbjct: 859 NKKPRIAKSLLK 869
BLAST of CSPI06G18410 vs. ExPASy TrEMBL
Match:
A0A5D3C4J1 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold13G00790 PE=4 SV=1)
HSP 1 Score: 412.5 bits (1059), Expect = 2.2e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 558 MDYISRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 617
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 618 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQTTKAFWKNVE 677
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 678 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKN 737
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 738 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 797
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 798 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHGHWHQNSPLSS 857
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K S+ ++G D
Sbjct: 858 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWELPLWAELKNSINASFCENGKD 917
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K A Q + + NLWK++IPK+C FF
Sbjct: 918 SPMWALNSNGLYTVASVKKALQQPEQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 977
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 978 VNTAEQLMKRLPKLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRTISSHLNSNVNCLS 1037
BLAST of CSPI06G18410 vs. ExPASy TrEMBL
Match:
A0A5D3DM72 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002870 PE=4 SV=1)
HSP 1 Score: 412.1 bits (1058), Expect = 2.9e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 495 MDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 554
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 555 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVE 614
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 615 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKN 674
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 675 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 734
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 735 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSS 794
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K SL ++G D
Sbjct: 795 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGND 854
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K Q+ + + NLWK++IPK+C FF
Sbjct: 855 SPMWTLNSNGLYTVASVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 914
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 915 VNTAEQLMKRLPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLS 974
BLAST of CSPI06G18410 vs. ExPASy TrEMBL
Match:
A0A1S4E2K5 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC107991687 PE=4 SV=1)
HSP 1 Score: 411.8 bits (1057), Expect = 3.7e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 495 MDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 554
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 555 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVE 614
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 615 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKVPVSTCKNIEKTWRNFLWKN 674
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 675 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 734
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 735 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSS 794
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K SL ++G D
Sbjct: 795 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGND 854
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K Q+ + + NLWK++IPK+C FF
Sbjct: 855 SPMWTLNSNGLYTVASVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 914
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 915 VNTAEQLMKRLPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLS 974
BLAST of CSPI06G18410 vs. ExPASy TrEMBL
Match:
A0A5A7TES3 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold366G00040 PE=4 SV=1)
HSP 1 Score: 397.5 bits (1020), Expect = 7.3e-107
Identity = 218/541 (40.30%), Postives = 286/541 (52.87%), Query Frame = 0
Query: 24 GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRT 83
G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT
Sbjct: 3 GNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISPINVDAART 62
Query: 84 NYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITL 143
+A++WG S FLPI YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITL
Sbjct: 63 EQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITL 122
Query: 144 IKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGG 203
IK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + SP +GG
Sbjct: 123 IKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITSPKERGG 182
Query: 204 LGINNIQSTNFALLSK-------------------------KGD---------------- 263
LGI+ ++ TNFALL+K KGD
Sbjct: 183 LGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHSSSRSPWFS 242
Query: 264 ---------------------------------------------------SIANMWNAE 323
SI +MWN
Sbjct: 243 ICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSFHYPRLFALSTNKDSSIRDMWNNT 302
Query: 324 KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPL 383
D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K A
Sbjct: 303 LMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPTWTLNSNGLYTVASVKKALQQ 362
Query: 384 NNQDETNEDDGKIYNNLWKSTIPKRCKFF-------------------------PSWCIL 443
+Q + + NLWK++IPK+C FF PSWC++
Sbjct: 363 PDQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLCSRPSWCVM 422
Query: 444 CKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQH 447
CK +EDR HLF CP +W+ + L + + LC + K KTKK +I +
Sbjct: 423 CKRNDEDRIHLFILCPIAKSIWRLISSHLNSNVNCLSPKDLCITMCSWKQKTKKNVILYN 482
BLAST of CSPI06G18410 vs. ExPASy TrEMBL
Match:
A0A5A7TIB8 (LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold206G00430 PE=4 SV=1)
HSP 1 Score: 387.5 bits (994), Expect = 7.6e-104
Identity = 216/565 (38.23%), Postives = 294/565 (52.04%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDYLS LL +L +K I GV+F NLTH+LFA DIL+F+ED E+ ++N++ L LFE
Sbjct: 473 MDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFES 532
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGLNINL+KSTI PIN+ T R N + WG S LP YLG+PLGGKP+ +FW
Sbjct: 533 ASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNIL 592
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
+K+Q+K+++WKY+ LSKGG+ITLI +TL S P Y + VFK PK + + I+ WRNFLW
Sbjct: 593 QKIQKKLSSWKYSQLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYWRNFLWNG 652
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
T + NI+LI+W+ ++SP KGGLGI+++ STNFALL K
Sbjct: 653 TSNGHNISLIRWNQVVSPKEKGGLGIHSVHSTNFALLCKWLWKFLTEKEPLWKRLIISKY 712
Query: 241 ------------------------------------------------------------ 300
Sbjct: 713 DQEKMGRFPSRGKYSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWNGNSPLSL 772
Query: 301 -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVD 360
K S+ ++WN D +++ +PLR ++ LW +KASLP PLPD G
Sbjct: 773 VVPRLFALSTNKKGSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTPLPDRGPS 832
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
W LN+N F ASIK + TN +Y LWK PK+CKFF
Sbjct: 833 KPLWKLNSNNIFDTASIKKDLSEASASPTNFHP-SLYKTLWKVDFPKKCKFFIWTLIHGC 892
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
P+WC +C ++ED HLF HCP++ LW K + +L K PN
Sbjct: 893 INTADRLQKRLPNWTLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALL-KWNSTPN 952
BLAST of CSPI06G18410 vs. NCBI nr
Match:
TYK06777.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 412.5 bits (1059), Expect = 4.5e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 558 MDYISRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 617
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 618 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQTTKAFWKNVE 677
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 678 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKN 737
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 738 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 797
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 798 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHGHWHQNSPLSS 857
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K S+ ++G D
Sbjct: 858 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWELPLWAELKNSINASFCENGKD 917
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K A Q + + NLWK++IPK+C FF
Sbjct: 918 SPMWALNSNGLYTVASVKKALQQPEQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 977
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 978 VNTAEQLMKRLPKLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRTISSHLNSNVNCLS 1037
BLAST of CSPI06G18410 vs. NCBI nr
Match:
KAA0039770.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK24727.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 412.1 bits (1058), Expect = 5.9e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 495 MDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 554
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 555 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVE 614
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 615 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKN 674
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 675 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 734
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 735 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSS 794
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K SL ++G D
Sbjct: 795 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGND 854
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K Q+ + + NLWK++IPK+C FF
Sbjct: 855 SPMWTLNSNGLYTVASVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 914
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 915 VNTAEQLMKRLPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLS 974
BLAST of CSPI06G18410 vs. NCBI nr
Match:
XP_016902461.1 (PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo])
HSP 1 Score: 411.8 bits (1057), Expect = 7.7e-111
Identity = 229/564 (40.60%), Postives = 299/564 (53.01%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDY+S LLN + +K IKGV G NLTHLLFA DILLF+EDDE +I N++N + LF+L
Sbjct: 495 MDYMSRLLNSVGEK--IKGVKLEGNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQL 554
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGL+INLNKSTISPIN+D RT +A++WG S FLPI YLGVPLGGK + FW
Sbjct: 555 ASGLSINLNKSTISPINVDASRTEQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVE 614
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
EK+ +K+ +WKY+ LSKGGKITLIK++LAS P Y + +FK P K+I+ WRNFLW+N
Sbjct: 615 EKINKKLASWKYSMLSKGGKITLIKSSLASLPTYQLSIFKVPVSTCKNIEKTWRNFLWKN 674
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
+ ++L+ W+ + S KGGLGI+ ++ TNFALL+K
Sbjct: 675 PPETHKLHLVNWAKITSSKEKGGLGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKY 734
Query: 241 ----KGD----------------------------------------------------- 300
KGD
Sbjct: 735 RSLSKGDIPCVCNHSSSRSPWFSICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSS 794
Query: 301 --------------SIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVD 360
SI +MWN D DL P++ LR + LW +K SL ++G D
Sbjct: 795 HYPRLYALSTNKESSIRDMWNNTLMDWDLNPRRQLREWEHPLWAELKNSLNASFCENGND 854
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
+ W LN+NG +TVAS+K Q+ + + NLWK++IPK+C FF
Sbjct: 855 SPMWTLNSNGLYTVASVKKTLQQPEQNLLDFQSQNTFKNLWKTSIPKKCIFFIWTLLYDS 914
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
PSWC++CK +EDR HLF CP +W+ + L + +
Sbjct: 915 VNTAEQLMKRLPNLCSRPSWCVMCKRNDEDRIHLFILCPIAKSIWRSISSHLSSNVNCLS 974
BLAST of CSPI06G18410 vs. NCBI nr
Match:
KAA0040037.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 397.5 bits (1020), Expect = 1.5e-106
Identity = 218/541 (40.30%), Postives = 286/541 (52.87%), Query Frame = 0
Query: 24 GKHNLTHLLFAADILLFMEDDEETINNMRNALRLFELASGLNINLNKSTISPINIDTQRT 83
G NLTHLLFA DILLF+EDDE +I N++N + LF+LASGL+INLNKSTISPIN+D RT
Sbjct: 3 GNINLTHLLFADDILLFVEDDEHSIQNLKNIINLFQLASGLSINLNKSTISPINVDAART 62
Query: 84 NYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITL 143
+A++WG S FLPI YLGVPLGGK + FW EK+ +K+ +WKY+ LSKGGKITL
Sbjct: 63 EQIASQWGISTKFLPINYLGVPLGGKQITKTFWKNVEEKINKKLASWKYSMLSKGGKITL 122
Query: 144 IKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGG 203
IK++LAS P Y + +FK P K+I+ WRNFLW+N + ++L+ W+ + SP +GG
Sbjct: 123 IKSSLASLPTYQLSIFKAPVSTCKNIEKTWRNFLWKNPPETHKLHLVNWAKITSPKERGG 182
Query: 204 LGINNIQSTNFALLSK-------------------------KGD---------------- 263
LGI+ ++ TNFALL+K KGD
Sbjct: 183 LGISRLKDTNFALLTKWLWRYIHEDSPLWKKIINAKYRSLSKGDIPCVCNHSSSRSPWFS 242
Query: 264 ---------------------------------------------------SIANMWNAE 323
SI +MWN
Sbjct: 243 ICKGLEWFQRHVSWKIKNGRSFSFWHSHWHQNSPLSFHYPRLFALSTNKDSSIRDMWNNT 302
Query: 324 KADRDLYPQKPLRSVKEVLWEYMKASL-PPLPDSGVDNHRWILNNNGSFTVASIKLARPL 383
D DL P++ LR + LW +K SL ++G D+ W LN+NG +TVAS+K A
Sbjct: 303 LMDWDLNPRRQLREWEYPLWAELKNSLNASFCENGKDSPTWTLNSNGLYTVASVKKALQQ 362
Query: 384 NNQDETNEDDGKIYNNLWKSTIPKRCKFF-------------------------PSWCIL 443
+Q + + NLWK++IPK+C FF PSWC++
Sbjct: 363 PDQSLLDLQSQNTFKNLWKTSIPKKCIFFIWTLLYDSVNTAEQLMKRLPNLCSRPSWCVM 422
Query: 444 CKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKKQIINQH 447
CK +EDR HLF CP +W+ + L + + LC + K KTKK +I +
Sbjct: 423 CKRNDEDRIHLFILCPIAKSIWRLISSHLNSNVNCLSPKDLCITMCSWKQKTKKNVILYN 482
BLAST of CSPI06G18410 vs. NCBI nr
Match:
KAA0041397.1 (LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa])
HSP 1 Score: 387.5 bits (994), Expect = 1.6e-103
Identity = 216/565 (38.23%), Postives = 294/565 (52.04%), Query Frame = 0
Query: 1 MDYLSILLNHLEKKNLIKGVSFNGKHNLTHLLFAADILLFMEDDEETINNMRNALRLFEL 60
MDYLS LL +L +K I GV+F NLTH+LFA DIL+F+ED E+ ++N++ L LFE
Sbjct: 473 MDYLSHLLINLAEKGKINGVNFGPNLNLTHILFADDILIFVEDKEDYVSNLKMILHLFES 532
Query: 61 ASGLNINLNKSTISPINIDTQRTNYVAAKWGFSVNFLPIQYLGVPLGGKPNPRHFWSETT 120
ASGLNINL+KSTI PIN+ T R N + WG S LP YLG+PLGGKP+ +FW
Sbjct: 533 ASGLNINLSKSTIFPINVPTDRANSIVDSWGISKGQLPTTYLGMPLGGKPSSSNFWDNIL 592
Query: 121 EKLQRKINNWKYASLSKGGKITLIKATLASFPNYHILVFKPPKYVYKDIKTIWRNFLWRN 180
+K+Q+K+++WKY+ LSKGG+ITLI +TL S P Y + VFK PK + + I+ WRNFLW
Sbjct: 593 QKIQKKLSSWKYSQLSKGGRITLINSTLESLPIYQLSVFKVPKGIAQKIEAYWRNFLWNG 652
Query: 181 TFDKKNINLIKWSTMLSPINKGGLGINNIQSTNFALLSK--------------------- 240
T + NI+LI+W+ ++SP KGGLGI+++ STNFALL K
Sbjct: 653 TSNGHNISLIRWNQVVSPKEKGGLGIHSVHSTNFALLCKWLWKFLTEKEPLWKRLIISKY 712
Query: 241 ------------------------------------------------------------ 300
Sbjct: 713 DQEKMGRFPSRGKYSSNNSPWKAVTNCISWFYKNIGWKVNDGEDISFWLDNWNGNSPLSL 772
Query: 301 -----------KGDSIANMWNAEKADRDLYPQKPLRSVKEVLWEYMKASLP-PLPDSGVD 360
K S+ ++WN D +++ +PLR ++ LW +KASLP PLPD G
Sbjct: 773 VVPRLFALSTNKKGSVKDLWNPSLKDWNIHVNRPLRDHEKNLWHNIKASLPTPLPDRGPS 832
Query: 361 NHRWILNNNGSFTVASIKLARPLNNQDETNEDDGKIYNNLWKSTIPKRCKFF-------- 420
W LN+N F ASIK + TN +Y LWK PK+CKFF
Sbjct: 833 KPLWKLNSNNIFDTASIKKDLSEASASPTNFHP-SLYKTLWKVDFPKKCKFFIWTLIHGC 892
Query: 421 -----------------PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPN 447
P+WC +C ++ED HLF HCP++ LW K + +L K PN
Sbjct: 893 INTADRLQKRLPNWTLSPNWCYMCNKSQEDINHLFIHCPYSQQLWSKAQALL-KWNSTPN 952
BLAST of CSPI06G18410 vs. TAIR 10
Match:
AT3G24255.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 73.6 bits (179), Expect = 4.7e-13
Identity = 41/142 (28.87%), Postives = 71/142 (50.00%), Query Frame = 0
Query: 92 FSVNFLPIQYLGVPLGGKPNPRHFWSETTEKLQRKINNWKYASLSKGGKITLIKATLASF 151
F+ LP++YLG+PL K + EK++ +I W LS G++ LI + + S
Sbjct: 18 FASGALPVRYLGLPLLTKKMTTSDYGPLVEKIRVRIGKWTARHLSFAGRLQLISSVIHSL 77
Query: 152 PNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNIQS 211
N+ + F+ P K+I +I +FLW + WS + +P ++GGLGI +++
Sbjct: 78 TNFWMSAFRLPSACIKEIDSICSSFLWSGPELNTKKAKVAWSDVCTPKDEGGLGIRSLKE 137
Query: 212 TN-FALLSKKGDSIANMWNAEK 233
N + S G++ W +K
Sbjct: 138 ANKGSFWSISGNTTLGSWMWKK 159
BLAST of CSPI06G18410 vs. TAIR 10
Match:
AT4G04650.1 (RNA-directed DNA polymerase (reverse transcriptase)-related family protein )
HSP 1 Score: 48.5 bits (114), Expect = 1.6e-05
Identity = 27/102 (26.47%), Postives = 49/102 (48.04%), Query Frame = 0
Query: 320 PSWCILCKAAEEDRQHLFAHCPFTTLLWKKVEVILGKPLLFPNSTALCKDLFKTKGKTKK 379
P+ C+LC A ++ R HLF C F+ ++W+ L P C + + + K
Sbjct: 168 PAECLLCNAHDDSRAHLFFECQFSGVVWRFFTA--STNLNPPAQLMDCLNWLLSPSREKN 227
Query: 380 -QIINQHLVATTLWNIWNENNRRIFKEEEKKVDSVWEDIQAI 421
+I + + ++ IW E N+R+ + +S+ +DIQ I
Sbjct: 228 ICLIIRLAFHSCVYAIWRERNQRLHSGVSRSTESILKDIQLI 267
BLAST of CSPI06G18410 vs. TAIR 10
Match:
AT4G29090.1 (Ribonuclease H-like superfamily protein )
HSP 1 Score: 47.8 bits (112), Expect = 2.7e-05
Identity = 34/142 (23.94%), Postives = 64/142 (45.07%), Query Frame = 0
Query: 150 SFPNYHILVFKPPKYVYKDIKTIWRNFLWRNTFDKKNINLIKWSTMLSPINKGGLGINNI 209
+ P Y + F PK V K I ++ +F WRN + K ++ W + +GG+G +I
Sbjct: 2 ALPTYTMACFLLPKTVCKQIISVLADFWWRNKQEAKGMHWKAWDHLSCYKAEGGIGFKDI 61
Query: 210 QSTNFALLSK-------KGDSI------------ANMWNAEKADRDLYPQKPLRSVKEVL 269
++ N ALL K + +S+ ++ NA R + K + + +E+L
Sbjct: 62 EAFNLALLGKQMWRMLSRPESLMAKVFKSRYFHKSDPLNAPLGSRPSFVWKSIHASQEIL 121
Query: 270 WEYMKASLPPLPDSGVDNHRWI 273
+ +A + D + H+W+
Sbjct: 122 RQGARAVVGNGEDIIIWRHKWL 143
BLAST of CSPI06G18410 vs. TAIR 10
Match:
AT1G45063.1 (copper ion binding;electron carriers )
HSP 1 Score: 47.4 bits (111), Expect = 3.6e-05
Identity = 26/85 (30.59%), Postives = 42/85 (49.41%), Query Frame = 0
Query: 320 PSWCILCKAAEEDRQHLFAHCPFTTLLWKKV--EVILGKPLLFPNSTALCKDLFKTKGKT 379
PS C+LC A +E RQH+F CPF+ +W + P +F +S + + K
Sbjct: 281 PSLCLLCNALDETRQHVFFDCPFSHEVWSFFCSNARVTPPRMFKDSARWLRHPCRDK--- 340
Query: 380 KKQIINQHLVATTLWNIWNENNRRI 403
K I + ++++IW E N R+
Sbjct: 341 KVAFILKLAYQASVYHIWRERNIRL 362
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
P0C2F6 | 7.0e-14 | 35.85 | Putative ribonuclease H protein At1g65750 OS=Arabidopsis thaliana OX=3702 GN=At1... | [more] |
O00370 | 2.6e-08 | 23.79 | LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1 | [more] |
P11369 | 7.0e-06 | 21.35 | LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE... | [more] |
Match Name | E-value | Identity | Description | |
A0A5D3C4J1 | 2.2e-111 | 40.60 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5D3DM72 | 2.9e-111 | 40.60 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A1S4E2K5 | 3.7e-111 | 40.60 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo OX=3656 GN=LOC1079... | [more] |
A0A5A7TES3 | 7.3e-107 | 40.30 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
A0A5A7TIB8 | 7.6e-104 | 38.23 | LINE-1 retrotransposable element ORF2 protein OS=Cucumis melo var. makuwa OX=119... | [more] |
Match Name | E-value | Identity | Description | |
TYK06777.1 | 4.5e-111 | 40.60 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0039770.1 | 5.9e-111 | 40.60 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] >TYK247... | [more] |
XP_016902461.1 | 7.7e-111 | 40.60 | PREDICTED: LINE-1 retrotransposable element ORF2 protein [Cucumis melo] | [more] |
KAA0040037.1 | 1.5e-106 | 40.30 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
KAA0041397.1 | 1.6e-103 | 38.23 | LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |
AT3G24255.1 | 4.7e-13 | 28.87 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT4G04650.1 | 1.6e-05 | 26.47 | RNA-directed DNA polymerase (reverse transcriptase)-related family protein | [more] |
AT4G29090.1 | 2.7e-05 | 23.94 | Ribonuclease H-like superfamily protein | [more] |
AT1G45063.1 | 3.6e-05 | 30.59 | copper ion binding;electron carriers | [more] |