CSPI06G17880 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G17880
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Integrase
Location	Chr6: 16256481 .. 16256843 (+)
RNA-Seq Expression	CSPI06G17880
Synteny	CSPI06G17880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTTGAAAGAAAAGAGTGAAGCACTTTTATGTTTTAAATCCTTTAAAGTTTTTAAAAATCAAAGTGGTCACAAGATAAAATCTTTGAGATCTGACCGTGGTGGGGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGATTTCACCATCAAATGACAACTCGAATGACTCCACGACAAAATGGAGTTGCAGAAAGAAAGAATAGAACAATCATGGAAATGGCAAGAAGTATGCTAAAAGCAAAAAATCTGCCAAACGATTTTTGGGGAGATGATGTTGCATGTACTGTTTACATTCTGAATCGAGCTCCAACAAGGGTTTTCCAGATA

mRNA sequence

ATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTTGAAAGAAAAGAGTGAAGCACTTTTATGTTTTAAATCCTTTAAAGTTTTTAAAAATCAAAGTGGTCACAAGATAAAATCTTTGAGATCTGACCGTGGTGGGGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGATTTCACCATCAAATGACAACTCGAATGACTCCACGACAAAATGGAGTTGCAGAAAGAAAGAATAGAACAATCATGGAAATGGCAAGAAGTATGCTAAAAGCAAAAAATCTGCCAAACGATTTTTGGGGAGATGATGTTGCATGTACTGTTTACATTCTGAATCGAGCTCCAACAAGGGTTTTCCAGATA

Coding sequence (CDS)

ATGATTTCAGTAGAAAGTTGTGGATTTATTTTTTTGAAAGAAAAGAGTGAAGCACTTTTATGTTTTAAATCCTTTAAAGTTTTTAAAAATCAAAGTGGTCACAAGATAAAATCTTTGAGATCTGACCGTGGTGGGGAATATATAGCTTTTGGTAATTTTTTCAAGGAGCAAGGATTTCACCATCAAATGACAACTCGAATGACTCCACGACAAAATGGAGTTGCAGAAAGAAAGAATAGAACAATCATGGAAATGGCAAGAAGTATGCTAAAAGCAAAAAATCTGCCAAACGATTTTTGGGGAGATGATGTTGCATGTACTGTTTACATTCTGAATCGAGCTCCAACAAGGGTTTTCCAGATA

Protein sequence

MISVESCGFIFLKEKSEALLCFKSFKVFKNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTPRQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTRVFQI

Homology

[Close]

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot
Match: P10978 (Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum OX=4097 PE=2 SV=1)

HSP 1 Score: 94.4 bits (233), Expect = 9.7e-19
Identity = 47/108 (43.52%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 12  LKEKSEALLCFKSF-KVFKNQSGHKIKSLRSDRGGEYIA--FGNFFKEQGFHHQMTTRMT 71
           LK K +    F+ F  + + ++G K+K LRSD GGEY +  F  +    G  H+ T   T
Sbjct: 519 LKTKDQVFQVFQKFHALVERETGRKLKRLRSDNGGEYTSREFEEYCSSHGIRHEKTVPGT 578

Query: 72  PRQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPT 117
           P+ NGVAER NRTI+E  RSML+   LP  FWG+ V    Y++NR+P+
Sbjct: 579 PQHNGVAERMNRTIVEKVRSMLRMAKLPKSFWGEAVQTACYLINRSPS 626

[Close]

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot
Match: Q94HW2 (Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana OX=3702 GN=RE1 PE=2 SV=1)

HSP 1 Score: 79.3 bits (194), Expect = 3.2e-14
Identity = 39/111 (35.14%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 12  LKEKSEALLCFKSFK-VFKNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTPR 71
           LK+KS+    F +FK + +N+   +I +  SD GGE++A   +F + G  H  +   TP 
Sbjct: 561 LKQKSQVKETFITFKNLLENRFQTRIGTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPE 620

Query: 72  QNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTRVFQI 122
            NG++ERK+R I+E   ++L   ++P  +W    A  VY++NR PT + Q+
Sbjct: 621 HNGLSERKHRHIVETGLTLLSHASIPKTYWPYAFAVAVYLINRLPTPLLQL 671

[Close]

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot
Match: Q9ZT94 (Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana OX=3702 GN=RE2 PE=4 SV=1)

HSP 1 Score: 75.9 bits (185), Expect = 3.6e-13
Identity = 38/111 (34.23%), Postives = 65/111 (58.56%), Query Frame = 0


Query: 12  LKEKSEALLCFKSFK-VFKNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTPR 71
           LK+KS+    F  FK + +N+   +I +L SD GGE++   ++  + G  H  +   TP 
Sbjct: 540 LKQKSQVKDTFIIFKSLVENRFQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPE 599

Query: 72  QNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTRVFQI 122
            NG++ERK+R I+EM  ++L   ++P  +W    +  VY++NR PT + Q+
Sbjct: 600 HNGLSERKHRHIVEMGLTLLSHASVPKTYWPYAFSVAVYLINRLPTPLLQL 650

[Close]

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot
Match: P04146 (Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3)

HSP 1 Score: 69.3 bits (168), Expect = 3.3e-11
Identity = 41/115 (35.65%), Postives = 62/115 (53.91%), Query Frame = 0


Query: 7   CGFIFLKEKSEALLCFKSFKVFKNQSGHKIK--SLRSDRGGEYIA--FGNFFKEQGFHHQ 66
           C    +K KS+    F+ F V K+++   +K   L  D G EY++     F  ++G  + 
Sbjct: 514 CVTYLIKYKSDVFSMFQDF-VAKSEAHFNLKVVYLYIDNGREYLSNEMRQFCVKKGISYH 573

Query: 67  MTTRMTPRQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +T   TP+ NGV+ER  RTI E AR+M+    L   FWG+ V    Y++NR P+R
Sbjct: 574 LTVPHTPQLNGVSERMIRTITEKARTMVSGAKLDKSFWGEAVLTATYLINRIPSR 627

[Close]

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot
Match: Q12491 (Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY2B-B PE=3 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 6.5e-07
Identity = 35/103 (33.98%), Postives = 48/103 (46.60%), Query Frame = 0


Query: 13  KEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYI--AFGNFFKEQGFHHQMTTRMTP 72
           + +   L  F S   F KNQ   ++  ++ DRG EY       FF  +G     TT    
Sbjct: 702 RREESILNVFTSILAFIKNQFNARVLVIQMDRGSEYTNKTLHKFFTNRGITACYTTTADS 761

Query: 73  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILN 113
           R +GVAER NRT++   R++L    LPN  W   V  +  I N
Sbjct: 762 RAHGVAERLNRTLLNDCRTLLHCSGLPNHLWFSAVEFSTIIRN 804

[Close]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL
Match: A0A5D3CLV1 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL
Match: A0A5D3BQ81 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL
Match: A0A5D3E3T2 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL
Match: A0A5A7UZJ8 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL
Match: A0A5D3CXM6 (Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=4 SV=1)

HSP 1 Score: 198.7 bits (504), Expect = 1.3e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11   FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
            FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 1032 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 1091

Query: 71   RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
            +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 1092 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 1139

[Close]

BLAST of CSPI06G17880 vs. NCBI nr
Match: TYJ95504.1 (integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. makuwa] >TYK12883.1 integrase [Cucumis melo var. makuwa] >TYK20599.1 integrase [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. NCBI nr
Match: KAA0060377.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. NCBI nr
Match: TYK30104.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. NCBI nr
Match: KAA0039947.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

[Close]

BLAST of CSPI06G17880 vs. NCBI nr
Match: KAA0038926.1 (integrase [Cucumis melo var. makuwa])

HSP 1 Score: 198.7 bits (504), Expect = 2.8e-47
Identity = 96/108 (88.89%), Postives = 103/108 (95.37%), Query Frame = 0


Query: 11  FLKEKSEALLCFKSFKVF-KNQSGHKIKSLRSDRGGEYIAFGNFFKEQGFHHQMTTRMTP 70
           FLKEKSEAL+CFKSFK F +NQSG+KIK+LRSDRGGEYIAFGNFFKEQG HHQMT RMTP
Sbjct: 567 FLKEKSEALVCFKSFKAFTENQSGYKIKTLRSDRGGEYIAFGNFFKEQGIHHQMTARMTP 626

Query: 71  RQNGVAERKNRTIMEMARSMLKAKNLPNDFWGDDVACTVYILNRAPTR 118
           +QNGVAERKNRTIMEMARSMLKAKNLPN+FWGD VACTVYILNRAPT+
Sbjct: 627 QQNGVAERKNRTIMEMARSMLKAKNLPNEFWGDAVACTVYILNRAPTK 674

The following BLAST results are available for this feature:

BLAST of CSPI06G17880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P10978	9.7e-19	43.52	Retrovirus-related Pol polyprotein from transposon TNT 1-94 OS=Nicotiana tabacum...	[more]
Q94HW2	3.2e-14	35.14	Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana O...	[more]
Q9ZT94	3.6e-13	34.23	Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana O...	[more]
P04146	3.3e-11	35.65	Copia protein OS=Drosophila melanogaster OX=7227 GN=GIP PE=1 SV=3	[more]
Q12491	6.5e-07	33.98	Transposon Ty2-B Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 20...	[more]

BLAST of CSPI06G17880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5D3CLV1	1.3e-47	88.89	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold132G00180 PE=4...	[more]
A0A5D3BQ81	1.3e-47	88.89	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold451G00890 PE=4...	[more]
A0A5D3E3T2	1.3e-47	88.89	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold156G00030 PE=4...	[more]
A0A5A7UZJ8	1.3e-47	88.89	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold98G001310 PE=4...	[more]
A0A5D3CXM6	1.3e-47	88.89	Integrase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold209G001540 PE=...	[more]

BLAST of CSPI06G17880 vs. NCBI nr


Match Name	E-value	Identity	Description
TYJ95504.1	2.8e-47	88.89	integrase [Cucumis melo var. makuwa] >TYK08522.1 integrase [Cucumis melo var. ma...	[more]
KAA0060377.1	2.8e-47	88.89	integrase [Cucumis melo var. makuwa]	[more]
TYK30104.1	2.8e-47	88.89	integrase [Cucumis melo var. makuwa]	[more]
KAA0039947.1	2.8e-47	88.89	integrase [Cucumis melo var. makuwa]	[more]
KAA0038926.1	2.8e-47	88.89	integrase [Cucumis melo var. makuwa]	[more]

BLAST of CSPI06G17880 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 6..120 e-value: 6.1E-23 score: 83.3
IPR001584	Integrase, catalytic core	PROSITE	PS50994	INTEGRASE	coord: 22..121 score: 12.25956
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 9..118

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G17880.1	CSPI06G17880.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015074	DNA integration
biological_process	GO:0006397	mRNA processing
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0008270	zinc ion binding
molecular_function	GO:0003676	nucleic acid binding