Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG
mRNA sequence
ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG
Coding sequence (CDS)
ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG
Protein sequence
MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDAIATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTPSPCFLCNGPHWARDCPQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD*
Homology
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match:
A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)
HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-120
Identity = 225/318 (70.75%), Postives = 261/318 (82.08%), Query Frame = 0
Query: 1 MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
M+EL+ D+VE+S K MI+ L SHGK+++D++VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5 MDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRA 64
Query: 61 ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
E SRH +NG ASTSTS M TH+IKVPKP+ YNGTRNAT+VENFLFGLEQYY+ALGI+
Sbjct: 65 EWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGII 124
Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
DDGAKIANAPNFLRE+AQLWWRRKHAE EKDR+IL+TWEQFK ELRKHFVPHNA+MEARG
Sbjct: 125 DDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARG 184
Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRD LKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDA 244
Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
IA L D KEK+ GE E KKE G+S +D G++GKA A K T P
Sbjct: 245 IAAAGALIDIYSKEKKRRVDEGEAFEPKKE-----GNSKQD-GKYGKAPFANKDT---IP 304
Query: 301 SPCFLCNGPHWARDCPQK 319
CFLC GPHW RDCP+K
Sbjct: 305 PTCFLCKGPHWTRDCPKK 313
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match:
A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1)
HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-116
Identity = 216/318 (67.92%), Postives = 256/318 (80.50%), Query Frame = 0
Query: 1 MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
M+EL+ D+VE+S K MI++L SHGK+++DL+VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5 MDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRA 64
Query: 61 ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
EC SRH +NG ASTSTS + TH+IKVPKP+MYNGTRNAT+VENFLFGLEQYY+ALGIV
Sbjct: 65 ECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIV 124
Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
DDGAKIANAPNFL E+AQLWW RKHAE EKDR+IL TW QFK ELRKHFV HNA MEARG
Sbjct: 125 DDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARG 184
Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRDGLKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDA 244
Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
IA + L D KEK+T GE E K+ ++ + ++GK A + T TP
Sbjct: 245 IAAAKALIDIYFKEKKTRVDEGEAFEPKEWNS-------KQDEKYGKTPFANRDT---TP 304
Query: 301 SPCFLCNGPHWARDCPQK 319
CFLC GPH R+CP++
Sbjct: 305 PTCFLCKGPHRTRECPKR 312
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match:
A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)
HSP 1 Score: 332.4 bits (851), Expect = 4.2e-87
Identity = 172/328 (52.44%), Postives = 226/328 (68.90%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + K++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
Q LDDAIA ETL DY + K E G S+K K K G + ++GK
Sbjct: 310 QTLDDAIAVAETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match:
A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)
HSP 1 Score: 329.7 bits (844), Expect = 2.7e-86
Identity = 171/328 (52.13%), Postives = 226/328 (68.90%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + +++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI EYVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
Q LDDAIA ETL DY + K E G S+K K + G + ++GK
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNQ 395
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match:
A0A5A7TAA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00340 PE=4 SV=1)
HSP 1 Score: 327.4 bits (838), Expect = 1.3e-85
Identity = 168/328 (51.22%), Postives = 225/328 (68.60%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + +++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDY----RPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATE 301
Q LDDAIA ETL DY + K+ + GG+ + K G ++GK
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395
BLAST of CSPI06G17390 vs. NCBI nr
Match:
KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])
HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-120
Identity = 225/318 (70.75%), Postives = 261/318 (82.08%), Query Frame = 0
Query: 1 MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
M+EL+ D+VE+S K MI+ L SHGK+++D++VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5 MDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRA 64
Query: 61 ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
E SRH +NG ASTSTS M TH+IKVPKP+ YNGTRNAT+VENFLFGLEQYY+ALGI+
Sbjct: 65 EWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGII 124
Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
DDGAKIANAPNFLRE+AQLWWRRKHAE EKDR+IL+TWEQFK ELRKHFVPHNA+MEARG
Sbjct: 125 DDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARG 184
Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRD LKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDA 244
Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
IA L D KEK+ GE E KKE G+S +D G++GKA A K T P
Sbjct: 245 IAAAGALIDIYSKEKKRRVDEGEAFEPKKE-----GNSKQD-GKYGKAPFANKDT---IP 304
Query: 301 SPCFLCNGPHWARDCPQK 319
CFLC GPHW RDCP+K
Sbjct: 305 PTCFLCKGPHWTRDCPKK 313
BLAST of CSPI06G17390 vs. NCBI nr
Match:
KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa])
HSP 1 Score: 428.7 bits (1101), Expect = 8.8e-116
Identity = 216/318 (67.92%), Postives = 256/318 (80.50%), Query Frame = 0
Query: 1 MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
M+EL+ D+VE+S K MI++L SHGK+++DL+VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5 MDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRA 64
Query: 61 ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
EC SRH +NG ASTSTS + TH+IKVPKP+MYNGTRNAT+VENFLFGLEQYY+ALGIV
Sbjct: 65 ECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIV 124
Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
DDGAKIANAPNFL E+AQLWW RKHAE EKDR+IL TW QFK ELRKHFV HNA MEARG
Sbjct: 125 DDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARG 184
Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRDGLKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDA 244
Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
IA + L D KEK+T GE E K+ ++ + ++GK A + T TP
Sbjct: 245 IAAAKALIDIYFKEKKTRVDEGEAFEPKEWNS-------KQDEKYGKTPFANRDT---TP 304
Query: 301 SPCFLCNGPHWARDCPQK 319
CFLC GPH R+CP++
Sbjct: 305 PTCFLCKGPHRTRECPKR 312
BLAST of CSPI06G17390 vs. NCBI nr
Match:
KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa])
HSP 1 Score: 332.4 bits (851), Expect = 8.6e-87
Identity = 172/328 (52.44%), Postives = 226/328 (68.90%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + K++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
Q LDDAIA ETL DY + K E G S+K K K G + ++GK
Sbjct: 310 QTLDDAIAVAETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395
BLAST of CSPI06G17390 vs. NCBI nr
Match:
KAA0065760.1 (polyprotein [Cucumis melo var. makuwa])
HSP 1 Score: 329.7 bits (844), Expect = 5.6e-86
Identity = 171/328 (52.13%), Postives = 226/328 (68.90%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + +++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI EYVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
Q LDDAIA ETL DY + K E G S+K K + G + ++GK
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNQ 395
BLAST of CSPI06G17390 vs. NCBI nr
Match:
KAA0040414.1 (uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa])
HSP 1 Score: 327.4 bits (838), Expect = 2.8e-85
Identity = 168/328 (51.22%), Postives = 225/328 (68.60%), Query Frame = 0
Query: 2 EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
EEL+ ++ E++ + K MIE++ + +++ +L VT ++ F+E ELH L
Sbjct: 70 EELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNLHTKSISFETR 129
Query: 62 VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
+D + EC S+H + STST + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189
Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
ALG+ DD A+I +AP FLR+AAQLWWRRK+A ++ + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249
Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309
Query: 242 QNLDDAIATVETLTDY----RPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATE 301
Q LDDAIA ETL DY + K+ + GG+ + K G ++GK
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDG 369
Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
A +G S P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A5A7T2W8 | 1.3e-120 | 70.75 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7SY30 | 4.3e-116 | 67.92 | Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... | [more] |
A0A5A7THC0 | 4.2e-87 | 52.44 | Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... | [more] |
A0A5A7VEX8 | 2.7e-86 | 52.13 | Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=... | [more] |
A0A5A7TAA5 | 1.3e-85 | 51.22 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... | [more] |
Match Name | E-value | Identity | Description | |
KAA0035961.1 | 2.7e-120 | 70.75 | uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3... | [more] |
KAA0035960.1 | 8.8e-116 | 67.92 | uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK3... | [more] |
KAA0040659.1 | 8.6e-87 | 52.44 | uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa] | [more] |
KAA0065760.1 | 5.6e-86 | 52.13 | polyprotein [Cucumis melo var. makuwa] | [more] |
KAA0040414.1 | 2.8e-85 | 51.22 | uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa] | [more] |
Match Name | E-value | Identity | Description | |