CSPI06G17390 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G17390
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionRetrotrans_gag domain-containing protein
LocationChr6: 15643609 .. 15645546 (+)
RNA-Seq ExpressionCSPI06G17390
SyntenyCSPI06G17390
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG

mRNA sequence

ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG

Coding sequence (CDS)

ATGGAGGAGCTACTTGTGGATCATGTCGAGGTCTCAAAAATCACTAAGGCTATGATTGAAGAACTTAGAGGCTCTCATGGCAAGGACATCCACGACCTCATTGTGGAGGTAACCAACATGCGCAAGTTCATGGAAGAGGAGCTCCATGCATTGCGTAAGGACGTCGACGAGGTACGTGCTGAATGTCTATCTAGACATAATGCTAATGGTACGGCATCCACTAGCACATCACACGTCATGGCCAGCACGCATCACATAAAAGTGCCAAAGCCCGAGATGTATAACGGCACGAGAAATGCCACAATTGTGGAGAATTTCCTATTCGGCCTTGAGCAATATTATGAGGCCCTAGGAATCGTCGACGATGGTGCCAAAATTGCGAACGCCCCAAATTTCCTACGTGAAGCAGCACAACTTTGGTGGCGTAGAAAGCATGCGGAACGGGAGAAGGACCGAAGCATCTTGCGAACGTGGGAGCAATTCAAAGGTGAGCTTCGAAAACACTTTGTCCCACATAATGCAGAGATGGAGGCCCGTGGTAAACTCAGACGGTTAAGACAAACCGGAAGTATTCCCGAGTACGTGAAGGAATTCACAACCCTCATGTTGGAAATCGATGACATGTCCGACAAAGACGCACTCTTTCATTTTCGAGATGGTCTCAAAGATTGGGCAAGACTGGAACTCGACCGACGGAATGTGCAGAATCTCGATGATGCCATTGCCACCGTAGAGACACTCACGGATTACCGACCCAAAGAAAAGAGAACAAACGAAAGTGGAGGAGAAGTGTCGGAGAAAAAAAAGGAACATGCCCACAAGGCGGGGGATAGCCACAGGGATAGTGGAAGGCACGGGAAAGCCACGGAAGCGAAGAAAGGTACATCTTTCAAAACTCCTAGCCCTTGTTTTCTCTGCAACGGTCCACATTGGGCAAGAGATTGTCCACAAAAGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTGATTAG

Protein sequence

MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDAIATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTPSPCFLCNGPHWARDCPQKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXD*
Homology
BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match: A0A5A7T2W8 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00550 PE=4 SV=1)

HSP 1 Score: 443.7 bits (1140), Expect = 1.3e-120
Identity = 225/318 (70.75%), Postives = 261/318 (82.08%), Query Frame = 0

Query: 1   MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
           M+EL+ D+VE+S   K MI+ L  SHGK+++D++VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5   MDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRA 64

Query: 61  ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
           E  SRH +NG ASTSTS  M  TH+IKVPKP+ YNGTRNAT+VENFLFGLEQYY+ALGI+
Sbjct: 65  EWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGII 124

Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
           DDGAKIANAPNFLRE+AQLWWRRKHAE EKDR+IL+TWEQFK ELRKHFVPHNA+MEARG
Sbjct: 125 DDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARG 184

Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
           KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRD LKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDA 244

Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
           IA    L D   KEK+     GE  E KKE     G+S +D G++GKA  A K T    P
Sbjct: 245 IAAAGALIDIYSKEKKRRVDEGEAFEPKKE-----GNSKQD-GKYGKAPFANKDT---IP 304

Query: 301 SPCFLCNGPHWARDCPQK 319
             CFLC GPHW RDCP+K
Sbjct: 305 PTCFLCKGPHWTRDCPKK 313

BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match: A0A5A7SY30 (Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold349G00560 PE=4 SV=1)

HSP 1 Score: 428.7 bits (1101), Expect = 4.3e-116
Identity = 216/318 (67.92%), Postives = 256/318 (80.50%), Query Frame = 0

Query: 1   MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
           M+EL+ D+VE+S   K MI++L  SHGK+++DL+VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5   MDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRA 64

Query: 61  ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
           EC SRH +NG ASTSTS  +  TH+IKVPKP+MYNGTRNAT+VENFLFGLEQYY+ALGIV
Sbjct: 65  ECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIV 124

Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
           DDGAKIANAPNFL E+AQLWW RKHAE EKDR+IL TW QFK ELRKHFV HNA MEARG
Sbjct: 125 DDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARG 184

Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
           KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRDGLKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDA 244

Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
           IA  + L D   KEK+T    GE  E K+ ++       +   ++GK   A + T   TP
Sbjct: 245 IAAAKALIDIYFKEKKTRVDEGEAFEPKEWNS-------KQDEKYGKTPFANRDT---TP 304

Query: 301 SPCFLCNGPHWARDCPQK 319
             CFLC GPH  R+CP++
Sbjct: 305 PTCFLCKGPHRTRECPKR 312

BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match: A0A5A7THC0 (Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold370G00130 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 4.2e-87
Identity = 172/328 (52.44%), Postives = 226/328 (68.90%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  K++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
           Q LDDAIA  ETL DY  + K      E  G  S+K K    K G   +    ++GK   
Sbjct: 310 QTLDDAIAVAETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395

BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match: A0A5A7VEX8 (Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 2.7e-86
Identity = 171/328 (52.13%), Postives = 226/328 (68.90%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  +++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI EYVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
           Q LDDAIA  ETL DY  + K      E  G  S+K K    + G   +    ++GK   
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNQ 395

BLAST of CSPI06G17390 vs. ExPASy TrEMBL
Match: A0A5A7TAA5 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold35G00340 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 1.3e-85
Identity = 168/328 (51.22%), Postives = 225/328 (68.60%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  +++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDY----RPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATE 301
           Q LDDAIA  ETL DY    + K+    + GG+  + K       G       ++GK   
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395

BLAST of CSPI06G17390 vs. NCBI nr
Match: KAA0035961.1 (uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK30442.1 uncharacterized protein E5676_scaffold349G00550 [Cucumis melo var. makuwa])

HSP 1 Score: 443.7 bits (1140), Expect = 2.7e-120
Identity = 225/318 (70.75%), Postives = 261/318 (82.08%), Query Frame = 0

Query: 1   MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
           M+EL+ D+VE+S   K MI+ L  SHGK+++D++VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5   MDELIQDNVEISNAAKEMIKVLGDSHGKEMYDILVEVTNLRKFVEEELHALRKNVDEVRA 64

Query: 61  ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
           E  SRH +NG ASTSTS  M  TH+IKVPKP+ YNGTRNAT+VENFLFGLEQYY+ALGI+
Sbjct: 65  EWHSRHASNGNASTSTSCTMVGTHNIKVPKPDTYNGTRNATMVENFLFGLEQYYKALGII 124

Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
           DDGAKIANAPNFLRE+AQLWWRRKHAE EKDR+IL+TWEQFK ELRKHFVPHNA+MEARG
Sbjct: 125 DDGAKIANAPNFLRESAQLWWRRKHAEWEKDRTILQTWEQFKAELRKHFVPHNADMEARG 184

Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
           KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRD LKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDDLKDWAKIELDRRNVRTLDDA 244

Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
           IA    L D   KEK+     GE  E KKE     G+S +D G++GKA  A K T    P
Sbjct: 245 IAAAGALIDIYSKEKKRRVDEGEAFEPKKE-----GNSKQD-GKYGKAPFANKDT---IP 304

Query: 301 SPCFLCNGPHWARDCPQK 319
             CFLC GPHW RDCP+K
Sbjct: 305 PTCFLCKGPHWTRDCPKK 313

BLAST of CSPI06G17390 vs. NCBI nr
Match: KAA0035960.1 (uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK30443.1 uncharacterized protein E5676_scaffold349G00560 [Cucumis melo var. makuwa])

HSP 1 Score: 428.7 bits (1101), Expect = 8.8e-116
Identity = 216/318 (67.92%), Postives = 256/318 (80.50%), Query Frame = 0

Query: 1   MEELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKDVDEVRA 60
           M+EL+ D+VE+S   K MI++L  SHGK+++DL+VEVTN+RKF+EEELHALRK+VDEVRA
Sbjct: 5   MDELIQDNVEISNAAKEMIKDLGDSHGKEMYDLLVEVTNLRKFVEEELHALRKNVDEVRA 64

Query: 61  ECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYYEALGIV 120
           EC SRH +NG ASTSTS  +  TH+IKVPKP+MYNGTRNAT+VENFLFGLEQYY+ALGIV
Sbjct: 65  ECHSRHASNGNASTSTSCTVVGTHNIKVPKPDMYNGTRNATMVENFLFGLEQYYKALGIV 124

Query: 121 DDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNAEMEARG 180
           DDGAKIANAPNFL E+AQLWW RKHAE EKDR+IL TW QFK ELRKHFV HNA MEARG
Sbjct: 125 DDGAKIANAPNFLHESAQLWWHRKHAEWEKDRTILHTWRQFKAELRKHFVLHNANMEARG 184

Query: 181 KLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNVQNLDDA 240
           KLRRLRQ GSIP+Y+KEFTTLMLEI+D+SDKDALFHFRDGLKDWA++ELDRRNV+ LDDA
Sbjct: 185 KLRRLRQIGSIPDYIKEFTTLMLEIEDLSDKDALFHFRDGLKDWAKIELDRRNVRTLDDA 244

Query: 241 IATVETLTDYRPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATEAKKGTSFKTP 300
           IA  + L D   KEK+T    GE  E K+ ++       +   ++GK   A + T   TP
Sbjct: 245 IAAAKALIDIYFKEKKTRVDEGEAFEPKEWNS-------KQDEKYGKTPFANRDT---TP 304

Query: 301 SPCFLCNGPHWARDCPQK 319
             CFLC GPH  R+CP++
Sbjct: 305 PTCFLCKGPHRTRECPKR 312

BLAST of CSPI06G17390 vs. NCBI nr
Match: KAA0040659.1 (uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa])

HSP 1 Score: 332.4 bits (851), Expect = 8.6e-87
Identity = 172/328 (52.44%), Postives = 226/328 (68.90%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  K++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQKELRELASTVTTLKAFVEGELHDLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
           Q LDDAIA  ETL DY  + K      E  G  S+K K    K G   +    ++GK   
Sbjct: 310 QTLDDAIAVAETLVDYSAQSKGKKPGPEKHGGKSDKTKNFGRKDGGKVKTFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395

BLAST of CSPI06G17390 vs. NCBI nr
Match: KAA0065760.1 (polyprotein [Cucumis melo var. makuwa])

HSP 1 Score: 329.7 bits (844), Expect = 5.6e-86
Identity = 171/328 (52.13%), Postives = 226/328 (68.90%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  +++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQEELKELTSTVTTLKAFVEGELHNLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI EYVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILEYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDYRPKEKRTN---ESGGEVSEKKKEHAHKAGDSHRD-SGRHGKATE 301
           Q LDDAIA  ETL DY  + K      E  G  S+K K    + G   +    ++GK   
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKSDKTKNFGRRDGGKVKTFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNQ 395

BLAST of CSPI06G17390 vs. NCBI nr
Match: KAA0040414.1 (uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa])

HSP 1 Score: 327.4 bits (838), Expect = 2.8e-85
Identity = 168/328 (51.22%), Postives = 225/328 (68.60%), Query Frame = 0

Query: 2   EELLVDHVEVSKITKAMIEELRGSHGKDIHDLIVEVTNMRKFMEEELHALRKD------- 61
           EEL+ ++ E++ + K MIE++  +  +++ +L   VT ++ F+E ELH L          
Sbjct: 70  EELVQENAEITSVAKEMIEDMGRTFQEELKELASTVTTLKAFVEGELHNLHTKSISFETR 129

Query: 62  VDEVRAECLSRHNANGTASTSTSHVMASTHHIKVPKPEMYNGTRNATIVENFLFGLEQYY 121
           +D +  EC S+H  +   STST    + T +IKVPKP++YNG RNAT+V+NFLFGLE+Y+
Sbjct: 130 LDALCVECRSKHLGSNAPSTSTHPTTSGTSNIKVPKPDVYNGVRNATVVDNFLFGLERYF 189

Query: 122 EALGIVDDGAKIANAPNFLREAAQLWWRRKHAEREKDRSILRTWEQFKGELRKHFVPHNA 181
            ALG+ DD A+I +AP FLR+AAQLWWRRK+A  ++  + + +WEQFK ELRKHFVPHNA
Sbjct: 190 VALGVRDDEARINHAPTFLRDAAQLWWRRKYA--DQSGNAIHSWEQFKAELRKHFVPHNA 249

Query: 182 EMEARGKLRRLRQTGSIPEYVKEFTTLMLEIDDMSDKDALFHFRDGLKDWARLELDRRNV 241
           E+E+RGKLRRLR TGSI +YVKEFTTLMLEI D+ +K+ALF F+DGLKDWA++ELDRRNV
Sbjct: 250 EIESRGKLRRLRHTGSILDYVKEFTTLMLEIGDLPEKEALFQFKDGLKDWAKIELDRRNV 309

Query: 242 QNLDDAIATVETLTDY----RPKEKRTNESGGEVSEKKKEHAHKAGDSHRDSGRHGKATE 301
           Q LDDAIA  ETL DY    + K+    + GG+  + K       G       ++GK   
Sbjct: 310 QTLDDAIAAAETLVDYSAQSKGKKPGPEKYGGKPDKTKNFGRKDGGKVKMFQWKNGKNDG 369

Query: 302 AKKGTSFKTPSPCFLCNGPHWARDCPQK 319
           A +G S   P PCF+C GPHW RDCP +
Sbjct: 370 AHRGESSNPPKPCFICKGPHWTRDCPNR 395

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A5A7T2W81.3e-12070.75Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7SY304.3e-11667.92Retrotrans_gag domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 ... [more]
A0A5A7THC04.2e-8752.44Reverse transcriptase domain-containing protein OS=Cucumis melo var. makuwa OX=1... [more]
A0A5A7VEX82.7e-8652.13Polyprotein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold37G00510 PE=... [more]
A0A5A7TAA51.3e-8551.22Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold... [more]
Match NameE-valueIdentityDescription
KAA0035961.12.7e-12070.75uncharacterized protein E6C27_scaffold56G001660 [Cucumis melo var. makuwa] >TYK3... [more]
KAA0035960.18.8e-11667.92uncharacterized protein E6C27_scaffold56G001640 [Cucumis melo var. makuwa] >TYK3... [more]
KAA0040659.18.6e-8752.44uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa][more]
KAA0065760.15.6e-8652.13polyprotein [Cucumis melo var. makuwa][more]
KAA0040414.12.8e-8551.22uncharacterized protein E6C27_scaffold35G00340 [Cucumis melo var. makuwa][more]
Match NameE-valueIdentityDescription
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 34..61
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..319
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 250..292
NoneNo IPR availablePANTHERPTHR34482:SF18RETROTRANSPOSON GAG DOMAIN, ASPARTIC PEPTIDASE DOMAIN PROTEIN-RELATEDcoord: 38..296
NoneNo IPR availablePANTHERPTHR34482DNA DAMAGE-INDUCIBLE PROTEIN 1-LIKEcoord: 38..296
IPR005162Retrotransposon gag domainPFAMPF03732Retrotrans_gagcoord: 129..223
e-value: 2.9E-18
score: 65.9

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G17390.1CSPI06G17390.1mRNA


GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0043170 macromolecule metabolic process
biological_process GO:0006807 nitrogen compound metabolic process
biological_process GO:0044238 primary metabolic process