CSPI06G17190 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G17190
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein of unknown function (DUF3511)
Location	Chr6: 15497825 .. 15498197 (-)
RNA-Seq Expression	CSPI06G17190
Synteny	CSPI06G17190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CAGCTCAGTTTTCGTACCATTTTTCCTCTCAAATGAAAATGAATTAAATATATACATATTTTAAAAAATTTTCTTTTTACCTTCCTCTCGTGAATTTCCAATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

mRNA sequence

CAGCTCAGTTTTCGTACCATTTTTCCTCTCAAATGAAAATGAATTAAATATATACATATTTTAAAAAATTTTCTTTTTACCTTCCTCTCGTGAATTTCCAATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

Coding sequence (CDS)

ATGGCTGCCAAAGGAAACAGAGAGAGAGGTGGTGTGCTTAAATCACCGTGTAGGTCAGATACGTATACGGCGGCGCCAACGGCGTGGAATACGCATAGCCATTTACACGGTGGTTCGTCGTCGGTTTCTAACGGCCACGATGAACCGGAGGTTAAAAGGCAACGGCGGATTGCGAAGTACAAGGCTTACGCCGTTGAAAGCAAATTGAAATCGTCGCTTAGAAGTGGGATTCGGTGGGTAAAGATCAAATGCAATGAGCTTCTTCAACGTTGA

Protein sequence

MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR*

Homology

[Close]

BLAST of CSPI06G17190 vs. ExPASy TrEMBL
Match: A0A0A0KCE9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 2.6e-43
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
          KAYAVESKLKSSLRSGIRWVKIKCNELLQR
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of CSPI06G17190 vs. ExPASy TrEMBL
Match: A0A5D3BVC0 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00180 PE=4 SV=1)

HSP 1 Score: 129.0 bits (323), Expect = 9.9e-27
Identity = 73/100 (73.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSSSVSNGHDEPE 60
          MA KGNRE GGVLKS CRSD Y          TAAPTAWNT        SSVSNGHDE E
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNT--------SSVSNGHDEQE 60

Query: 61 VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
          VKRQRRIAKYKAYAVESKLKSSLR+GIRWVKIK +ELL R
Sbjct: 61 VKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of CSPI06G17190 vs. ExPASy TrEMBL
Match: A0A6J1CB45 (uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009876 PE=4 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 1.5e-22
Identity = 65/104 (62.50%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSP--CRSDTY-----------TAAPTAW-NTHSHLHGGSSSVSNGH 60
           MA  GNRERG   KS   C SD Y              P AW NTH H+HGG SS S G+
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGG-SSFSGGY 60

Query: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
           DEPE KRQRRIAKYKAYAVESKLKSS R+GIRWVKIKCN++  R
Sbjct: 61  DEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of CSPI06G17190 vs. ExPASy TrEMBL
Match: A0A7J7CXF2 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01651 PE=4 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 5.4e-09
Identity = 37/90 (41.11%), Postives = 57/90 (63.33%), Query Frame = 0


Query: 4   KGNRERGGVLKSPCRSDTYTAAPTAWNTHSHL-----HGGSSSVSNGHDEPEVKRQRRIA 63
           +G   R  V  + CR+ + ++   +WN H  L        +SS  + + +PE+KRQRR+ 
Sbjct: 34  EGYDNRRPVSYNACRTSSTSSMVPSWNGHHDLIINPYSSTTSSSWSFNVDPELKRQRRVV 93

Query: 64  KYKAYAVESKLKSSLRSGIRWVKIKCNELL 89
           KYKAYAVE K+K++LRSG+RW+K KC  ++
Sbjct: 94  KYKAYAVEGKMKANLRSGLRWIKNKCGAIV 123

[Close]

BLAST of CSPI06G17190 vs. ExPASy TrEMBL
Match: M0TP99 (Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993342 PE=4 SV=1)

HSP 1 Score: 68.6 bits (166), Expect = 1.6e-08
Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 0


Query: 7   RERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYAVE 66
           R +G V  S  RS     AP      S     S S +    +PE+KR+RR+AKYKAYAVE
Sbjct: 48  RVKGNVPSSRRRSPDPPFAPPRRGVSS---SSSRSSAWCFGDPEMKRRRRVAKYKAYAVE 107

Query: 67  SKLKSSLRSGIRWVKIKCNELL 89
            K+KSS+R G RW+KIKC+EL+
Sbjct: 108 GKVKSSIRKGFRWIKIKCSELI 126

[Close]

BLAST of CSPI06G17190 vs. NCBI nr
Match: KGN47400.1 (hypothetical protein Csa_023055 [Cucumis sativus])

HSP 1 Score: 184.1 bits (466), Expect = 5.3e-43
Identity = 90/90 (100.00%), Postives = 90/90 (100.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY
Sbjct: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
          KAYAVESKLKSSLRSGIRWVKIKCNELLQR
Sbjct: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 90

[Close]

BLAST of CSPI06G17190 vs. NCBI nr
Match: TYK02938.1 (hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa])

HSP 1 Score: 129.0 bits (323), Expect = 2.0e-26
Identity = 73/100 (73.00%), Postives = 75/100 (75.00%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSSSVSNGHDEPE 60
          MA KGNRE GGVLKS CRSD Y          TAAPTAWNT        SSVSNGHDE E
Sbjct: 1  MAGKGNREGGGVLKSTCRSDMYTSSSDNPQRFTAAPTAWNT--------SSVSNGHDEQE 60

Query: 61 VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
          VKRQRRIAKYKAYAVESKLKSSLR+GIRWVKIK +ELL R
Sbjct: 61 VKRQRRIAKYKAYAVESKLKSSLRNGIRWVKIKYSELLHR 92

[Close]

BLAST of CSPI06G17190 vs. NCBI nr
Match: KAG7026338.1 (hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 126.3 bits (316), Expect = 1.3e-25
Identity = 66/100 (66.00%), Postives = 74/100 (74.00%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSPCRSDTY----------TAAPTAWNTHSHLHGGSSSVSNGHDEPE 60
           MAA+G+ ERGG LKSPCRSDTY           A   A N HSHLHGGS+    G DE E
Sbjct: 1   MAARGHTERGGQLKSPCRSDTYIDTENQQQFPAAQTAAGNRHSHLHGGSTFSKGGSDESE 60

Query: 61  VKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
           VKRQ+RIAKYKAYAVESK K+S+RSGIRWVKIKC +LL+R
Sbjct: 61  VKRQKRIAKYKAYAVESKFKASIRSGIRWVKIKCGDLLRR 100

[Close]

BLAST of CSPI06G17190 vs. NCBI nr
Match: XP_022138799.1 (uncharacterized protein LOC111009876 [Momordica charantia])

HSP 1 Score: 115.2 bits (287), Expect = 3.0e-22
Identity = 65/104 (62.50%), Postives = 70/104 (67.31%), Query Frame = 0


Query: 1   MAAKGNRERGGVLKSP--CRSDTY-----------TAAPTAW-NTHSHLHGGSSSVSNGH 60
           MA  GNRERG   KS   C SD Y              P AW NTH H+HGG SS S G+
Sbjct: 1   MATGGNRERGSEFKSAYICSSDNYGNEMNGRSQVNQRFPAAWNNTHGHMHGG-SSFSGGY 60

Query: 61  DEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
           DEPE KRQRRIAKYKAYAVESKLKSS R+GIRWVKIKCN++  R
Sbjct: 61  DEPEAKRQRRIAKYKAYAVESKLKSSFRNGIRWVKIKCNDIFHR 103

[Close]

BLAST of CSPI06G17190 vs. NCBI nr
Match: KAG6575094.1 (hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sororia] >KAG7013667.1 hypothetical protein SDJN02_23834, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 105.9 bits (263), Expect = 1.8e-19
Identity = 57/90 (63.33%), Postives = 67/90 (74.44%), Query Frame = 0


Query: 1  MAAKGNRERGGVLKSPCRSDTYTAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKY 60
          MAA GNR RG  LK PCRSDTY       ++ +H    +S+ +  HDEPE KRQRR+AKY
Sbjct: 1  MAANGNRGRGRELKKPCRSDTYV------SSENHQLPAASTAA-CHDEPEAKRQRRVAKY 60

Query: 61 KAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
          KAYAVESK K+SLR+GIRWVKIKC+ELL R
Sbjct: 61 KAYAVESKFKASLRNGIRWVKIKCSELLNR 83

[Close]

BLAST of CSPI06G17190 vs. TAIR 10
Match: AT2G19460.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-09
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0


Query: 19  SDTYTAAPTAWNTHSHLHGG--SSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSG 78
           S +YT  PT      +   G  SSS S G  +P+++R++R+  Y+AY VE KLK S R  
Sbjct: 44  STSYTDYPTRIPEDQNPKKGRSSSSSSWGFVDPDLQRKKRVVSYRAYTVEGKLKGSFRKS 103

Query: 79  IRWVKIKCNELL 89
            +W+K KCN+LL
Sbjct: 104 FKWIKDKCNKLL 115

[Close]

BLAST of CSPI06G17190 vs. TAIR 10
Match: AT2G47480.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 57.0 bits (136), Expect = 9.2e-09
Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 0


Query: 36  HGGSSSVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELLQR 91
           +  SS    G  + E+KR++RIA+YKAY VE K+KS+L++G RW+K KC +++ R
Sbjct: 55  NASSSLRIGGLSDAEMKRKKRIARYKAYTVEGKVKSTLKNGFRWIKNKCCQIVHR 109

[Close]

BLAST of CSPI06G17190 vs. TAIR 10
Match: AT3G05725.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 54.3 bits (129), Expect = 5.9e-08
Identity = 28/83 (33.73%), Postives = 49/83 (59.04%), Query Frame = 0


Query: 14  KSPCRSDTY--------TAAPTAWNTHSHLHGGSSSVSNGHDEPEVKRQRRIAKYKAYAV 73
           +SP ++D +           P   ++HS L  G        ++PE+KR+RR+AKYK Y+ 
Sbjct: 45  RSPIKTDIWRKMSYKDMPVRPRRSSSHSTLFKG------WWNDPEIKRKRRVAKYKLYSA 104

Query: 74  ESKLKSSLRSGIRWVKIKCNELL 89
           E K+K +LR   +W+KI+C++++
Sbjct: 105 EGKMKITLRKSYKWIKIQCSKII 121

[Close]

BLAST of CSPI06G17190 vs. TAIR 10
Match: AT5G11970.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 45.8 bits (107), Expect = 2.1e-05
Identity = 20/48 (41.67%), Postives = 33/48 (68.75%), Query Frame = 0


Query: 41  SVSNGHDEPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELL 89
           S S G  +PE++R++R+A YK Y VE K+K S R+  RW+K +  +++
Sbjct: 54  SKSWGITDPELQRKKRVASYKMYGVEGKVKGSFRNSFRWLKQRYTQVV 101

[Close]

BLAST of CSPI06G17190 vs. TAIR 10
Match: AT3G62640.1 (Protein of unknown function (DUF3511) )

HSP 1 Score: 44.3 bits (103), Expect = 6.2e-05
Identity = 17/41 (41.46%), Postives = 30/41 (73.17%), Query Frame = 0


Query: 48  EPEVKRQRRIAKYKAYAVESKLKSSLRSGIRWVKIKCNELL 89
           + E KR++RIA YK YA+E K+KS+++ G  W+K + + ++
Sbjct: 68  DAETKRKKRIATYKTYALEGKVKSTVKKGFHWIKDRYSHII 108

The following BLAST results are available for this feature:

BLAST of CSPI06G17190 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G17190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCE9	2.6e-43	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G312030 PE=4 SV=1	[more]
A0A5D3BVC0	9.9e-27	73.00	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1CB45	1.5e-22	62.50	uncharacterized protein LOC111009876 OS=Momordica charantia OX=3673 GN=LOC111009...	[more]
A0A7J7CXF2	5.4e-09	41.11	Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW13G01651 ...	[more]
M0TP99	1.6e-08	48.78	Uncharacterized protein OS=Musa acuminata subsp. malaccensis OX=214687 GN=103993...	[more]

BLAST of CSPI06G17190 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN47400.1	5.3e-43	100.00	hypothetical protein Csa_023055 [Cucumis sativus]	[more]
TYK02938.1	2.0e-26	73.00	hypothetical protein E5676_scaffold46G00180 [Cucumis melo var. makuwa]	[more]
KAG7026338.1	1.3e-25	66.00	hypothetical protein SDJN02_12839, partial [Cucurbita argyrosperma subsp. argyro...	[more]
XP_022138799.1	3.0e-22	62.50	uncharacterized protein LOC111009876 [Momordica charantia]	[more]
KAG6575094.1	1.8e-19	63.33	hypothetical protein SDJN03_25733, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI06G17190 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G19460.1	9.2e-09	43.06	Protein of unknown function (DUF3511)	[more]
AT2G47480.1	9.2e-09	47.27	Protein of unknown function (DUF3511)	[more]
AT3G05725.1	5.9e-08	33.73	Protein of unknown function (DUF3511)	[more]
AT5G11970.1	2.1e-05	41.67	Protein of unknown function (DUF3511)	[more]
AT3G62640.1	6.2e-05	41.46	Protein of unknown function (DUF3511)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021899	Protein of unknown function DUF3511	PFAM	PF12023	DUF3511	coord: 47..88 e-value: 9.6E-21 score: 73.4
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..45
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 23..53
None	No IPR available	PANTHER	PTHR33193	DOMAIN PROTEIN, PUTATIVE (DUF3511)-RELATED	coord: 14..86
None	No IPR available	PANTHER	PTHR33193:SF41	SUBFAMILY NOT NAMED	coord: 14..86

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G17190.1	CSPI06G17190.1	mRNA