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CSPI06G17130 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCCTAAGACCCGACCCGACAACCAGCTATCCGGGTCGAACCAACCGGTTCTACAAGGGTCCGGTCATATTCCCATTCGGGTTCGGTTTAAGCTACTAAAAATTCTCCCCCTCCATTTTGGACGCCCCAACAAAAATCTCACTCTCTTTCTCAAGTTTCTCCTCCAATTCCTCCGCCGGAATCAAAGTCTCTCACACTGACTGCGCCCCGTCTTCGATCTCTCCATTCTGATCGACGTCAAGAACACCGGAACCGTCGACGGATCTCACACCACTATCGTCTTCTCAACCGCTCCAAACCAGATCTGGTCGTACTTGATCGGATTCGAAAAGGTCCATATCATGGCCTGGATCTTGAAGCGAGTTCGAATCGAAATTATGTTAAAATTACAGAGAAGTAATTAAAAAGGTAAATTGATTGTAAATTAAAAAAAAAAAATCAAATAGGTTGAAGAAGAAAATTGGAAGTAATTGTGATTATAAGATGTTTGGTATCGAAAAGTAAGATTGTGCCTCAAACGCAGCAAATTTGCGAGGGGCTATT ATGGGCCTAAGACCCGACCCGACAACCAGCTATCCGGGTCGAACCAACCGGTTCTACAAGGGTCCGGTCATATTCCCATTCGGGTTCGTTTCTCCTCCAATTCCTCCGCCGGAATCAAAGTCTCTCACACTGACTGCGCCCCGTCTTCGATCTCTCCATTCTGATCGACGTCAAGAACACCGGAACCGTCGACGGATCTCACACCACTATCGTCTTCTCAACCGCTCCAAACCAGATCTGGTCGTACTTGATCGGATTCGAAAAGGTCCATATCATGGCCTGGATCTTGAAGCGAGTTCGAATCGAAATTATGTTAAAATTACAGAGAAGTAATTAAAAAGGTAAATTGATTGTAAATTAAAAAAAAAAAATCAAATAGGTTGAAGAAGAAAATTGGAAGTAATTGTGATTATAAGATGTTTGGTATCGAAAAGTAAGATTGTGCCTCAAACGCAGCAAATTTGCGAGGGGCTATT ATGGGCCTAAGACCCGACCCGACAACCAGCTATCCGGGTCGAACCAACCGGTTCTACAAGGGTCCGGTCATATTCCCATTCGGGTTCGTTTCTCCTCCAATTCCTCCGCCGGAATCAAAGTCTCTCACACTGACTGCGCCCCGTCTTCGATCTCTCCATTCTGATCGACGTCAAGAACACCGGAACCGTCGACGGATCTCACACCACTATCGTCTTCTCAACCGCTCCAAACCAGATCTGGTCGTACTTGATCGGATTCGAAAAGGTCCATATCATGGCCTGGATCTTGAAGCGAGTTCGAATCGAAATTATGTTAAAATTACAGAGAAGTAA MGLRPDPTTSYPGRTNRFYKGPVIFPFGFVSPPIPPPESKSLTLTAPRLRSLHSDRRQEHRNRRRISHHYRLLNRSKPDLVVLDRIRKGPYHGLDLEASSNRNYVKITEK* Homology
BLAST of CSPI06G17130 vs. ExPASy Swiss-Prot
Match: P83344 (Putative beta-D-xylosidase (Fragment) OS=Prunus persica OX=3760 PE=2 SV=1) HSP 1 Score: 48.1 bits (113), Expect = 7.3e-05 Identity = 19/28 (67.86%), Postives = 21/28 (75.00%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy Swiss-Prot
Match: A5JTQ2 (Beta-xylosidase/alpha-L-arabinofuranosidase 1 (Fragment) OS=Medicago sativa subsp. varia OX=36902 GN=Xyl1 PE=1 SV=1) HSP 1 Score: 45.8 bits (107), Expect = 3.6e-04 Identity = 18/28 (64.29%), Postives = 20/28 (71.43%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy Swiss-Prot
Match: A5JTQ3 (Beta-xylosidase/alpha-L-arabinofuranosidase 2 OS=Medicago sativa subsp. varia OX=36902 GN=Xyl2 PE=2 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 8.1e-04 Identity = 32/90 (35.56%), Postives = 42/90 (46.67%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy TrEMBL
Match: A0A0A0KCY2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G310490 PE=4 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 4.6e-10 Identity = 51/121 (42.15%), Postives = 63/121 (52.07%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy TrEMBL
Match: A0A6J1L226 (beta-D-xylosidase 1-like OS=Cucurbita maxima OX=3661 GN=LOC111499141 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy TrEMBL
Match: A0A5D3BVV3 (Beta-D-xylosidase 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold46G00220 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy TrEMBL
Match: A0A0A0KHZ3 (Fn3_like domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G309980 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. ExPASy TrEMBL
Match: A0A6J1CAK4 (beta-D-xylosidase 1 OS=Momordica charantia OX=3673 GN=LOC111009725 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 1.4e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. NCBI nr
Match: KAG7013671.1 (Beta-D-xylosidase 1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. NCBI nr
Match: KAG6575099.1 (Beta-D-xylosidase 1, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 62.8 bits (151), Expect = 2.2e-06 Identity = 26/29 (89.66%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. NCBI nr
Match: XP_008458374.2 (PREDICTED: LOW QUALITY PROTEIN: beta-D-xylosidase 1-like [Cucumis melo]) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. NCBI nr
Match: XP_022138609.1 (beta-D-xylosidase 1 [Momordica charantia]) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. NCBI nr
Match: TYK02942.1 (beta-D-xylosidase 1-like [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 2.9e-06 Identity = 25/29 (86.21%), Postives = 27/29 (93.10%), Query Frame = 0
BLAST of CSPI06G17130 vs. TAIR 10
Match: AT5G49360.1 (beta-xylosidase 1 ) HSP 1 Score: 44.3 bits (103), Expect = 7.5e-05 Identity = 17/20 (85.00%), Postives = 19/20 (95.00%), Query Frame = 0
BLAST of CSPI06G17130 vs. TAIR 10
Match: AT1G02640.1 (beta-xylosidase 2 ) HSP 1 Score: 40.8 bits (94), Expect = 8.3e-04 Identity = 16/28 (57.14%), Postives = 20/28 (71.43%), Query Frame = 0
BLAST of CSPI06G17130 vs. TAIR 10
Match: AT5G64570.1 (beta-D-xylosidase 4 ) HSP 1 Score: 40.8 bits (94), Expect = 8.3e-04 Identity = 15/28 (53.57%), Postives = 19/28 (67.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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