CSPI06G16590 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G16590
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	zinc finger protein CONSTANS-LIKE 1 isoform X1
Location	Chr6: 15021555 .. 15023859 (+)
RNA-Seq Expression	CSPI06G16590
Synteny	CSPI06G16590

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CGAGCTTCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACGCGTCTTCTGATCGGAGCTCCTCCTTCGTGTTTCTCACTCGCTGCTGTTCCTCTGATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCTGATTCTTCCATTAAGCTTTGGAATTCTGATCAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCAGAACCCCTCAAAATCCGTCCATCAACTAACAACTTTTTATTACATCCATCAGCTTTTCCCCTCCTTAATCCTGATTCTCTTCAATCCAATGATACTGATTCATTTCTTCAACGCACTTTTTCTTCCTCCTCGCCACCGCCTTCTGCAGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGGTGAGACGAATGAAATTAACTAATGCGACTAAAAAATAATATATCTCGTGAGACCAACACAATCTTTTTTAGAAAAAATTACAGCATATATACATTCAAAGATTTGGGAAAAAACGTCGTAATGTGATCATCATATGTATCGAGTAAGTTTTGGCTGGATATTAGATTCAGGTTCAATGCATTCTGCAAAGGTTGATCATAAACTGATGTGACGATGACATTCAATAATTTTTGTGGTAATTATTGTAATGAACAAAAATCAGATTTTATGAACAATCGTAAACATTAATAAAAGTTCATCTTGGTTAATTTTATGATTGATTAAAAAAAAATTGTTACTTTATTTGACTGTGGAATAATTTATGCCATTAATGGAAGCGGTCAACTTAATTCCATGCAAAAGGATCATTAAAAAAATGGCTTTTCATGAATCCAAAGAGTTTTGTTTTATTATTTTTTTTTTAAAAAAAAGGGGTTTTTGAGTATAATATTCAAATGAAAACATATACTATACTATTATTAAGAGAGACAGACTGATTAATAAAGATATTCTTATAGTATAGTTTGTGGCTTGACAAGCATTGATCGAATAATATATATATAACATATTAAATAGTATTAAGATAAGTTGCAGTGTAATTAAGTATTTTTTATAATGGATGGAAATTGGGCTTTGAATAATTATATTGAAAATGGTGCAGAAGAAGAATAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAGAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGGATTGAAAGATATAGAACCAAAAGACACCAAAGGAACTTCAACAAGAAGATTAAGGTTTCTTTTTTTCTTTCTTCTCATATCATTATATTCTTCTTTATCTATCTTAATAATTATATAAATGGATTAATTCTCTTATAGAAAGAATAAATAATAATTTCATCTCTTATTCTACTATCTACATATTATTTCATAGATTCTATATGCCAACAACTATGTATTTATATATACATATATCAGCTAATATAATTATAATATTTCAATTTCCTTTAATCTTAAACTTTTTGCTTTTGTCACATCTAACTTATATGAAAAACTCCAAAATACCCTCTCTTTTTTTAATTCAATCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTTTCATTTTAAAGGTTTGAAAGGTCATTTGATTATTTAGAAGAGGGTAACAATGGAAAAGACAGATTTTTTAAAAACCATCCCAAAAATGGGTCCAAAAGCCAATTAAACAATTCACAAGTAAACGAATCTGTTTTTGTAGGTTATACTGACTAATATTATTTGGGTGTTGGTTAAAGTATGCTTGCAGGAAGTCGTTGGCAGATAGTCGACCACGCATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCAACACGAACGAGAGGAAGAAGAAGAAGAAGAACAGCAACGGGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATCGATACATATTCCACGAACCTTATTCCATGAATCTCACACAACAACTAATTACAATAATAATAATAATAATAATAACGTACGTAGTTGTAGTAGTCTCTAGTGTGTCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTACCTGAGAAATTTATTTTATATCTATACTTATTTTAGCTTCTTTTCTCTATATATGTATGAAAAAATTATATGATAAGTATACAATATATATGTAATTATAATGATGTCATTCAAGGTGTGAATACAAGGATAATTGAGG

mRNA sequence

CGAGCTTCCTCTTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACGCGTCTTCTGATCGGAGCTCCTCCTTCGTGTTTCTCACTCGCTGCTGTTCCTCTGATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCTGATTCTTCCATTAAGCTTTGGAATTCTGATCAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCAGAACCCCTCAAAATCCGTCCATCAACTAACAACTTTTTATTACATCCATCAGCTTTTCCCCTCCTTAATCCTGATTCTCTTCAATCCAATGATACTGATTCATTTCTTCAACGCACTTTTTCTTCCTCCTCGCCACCGCCTTCTGCAGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAGAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGGATTGAAAGATATAGAACCAAAAGACACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGCAGGAAGTCGTTGGCAGATAGTCGACCACGCATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCAACACGAACGAGAGGAAGAAGAAGAAGAAGAACAGCAACGGGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATCGATACATATTCCACGAACCTTATTCCATGAATCTCACACAACAACTAATTACAATAATAATAATAATAATAATAACGTACGTAGTTGTAGTAGTCTCTAGTGTGTCATTCGGCCTCTTCCATTTTGACCTGCCTTTCAATTACCTGAGAAATTTATTTTATATCTATACTTATTTTAGCTTCTTTTCTCTATATATGTATGAAAAAATTATATGATAAGTATACAATATATATGTAATTATAATGATGTCATTCAAGGTGTGAATACAAGGATAATTGAGG

Coding sequence (CDS)

ATGGCCTTTTCCCCATTTCTCTCCGCCGCCTCACATTCCTCCGCCGACCTCGCAGGCGTTGATTTTGACTGGTTGCCTGATTCTTCCATTAAGCTTTGGAATTCTGATCAATTTTCCGACAGTTGTGGCGACGGTTCACCGCCTTCTCCTCCAGAACCCCTCAAAATCCGTCCATCAACTAACAACTTTTTATTACATCCATCAGCTTTTCCCCTCCTTAATCCTGATTCTCTTCAATCCAATGATACTGATTCATTTCTTCAACGCACTTTTTCTTCCTCCTCGCCACCGCCTTCTGCAGCCATCGATCCTCCTATCAACCGGCCGCTCTTCCCCGCCGGCGATTTTCAGAAGAAGAATAATAATAATGAAAGAGGAGATGAGAGTCCAGTTTCATGTGAGAGTAGCATCACCATTATTGAAGGGATGAGCAGAGCTTGTAGGTACAGTCCTGAAGAGAAGAAGGAAAGGATTGAAAGATATAGAACCAAAAGACACCAAAGGAACTTCAACAAGAAGATTAAGTATGCTTGCAGGAAGTCGTTGGCAGATAGTCGACCACGCATTAGAGGACGATTTGCGAGGTACAACGACGAGGTAGTGAAGAATTATCCAGTGCAATGGAATCAACACGAACGAGAGGAAGAAGAAGAAGAAGAACAGCAACGGGAAGCAAATAGTTGCGGAGATAATTGGATCAAGTATTTCATCGATACATATTCCACGAACCTTATTCCATGA

Protein sequence

MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPSTNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPAGDFQKKNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTYSTNLIP*

Homology

[Close]

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot
Match: Q9SK53 (Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1 SV=1)

HSP 1 Score: 54.7 bits (130), Expect = 1.7e-06
Identity = 28/53 (52.83%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 146 ACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYND 199
           A + SP E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 221 AVQLSPAEREARVLRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 273

[Close]

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot
Match: Q940T9 (Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2 SV=2)

HSP 1 Score: 53.1 bits (126), Expect = 5.1e-06
Identity = 28/57 (49.12%), Postives = 37/57 (64.91%), Query Frame = 0


Query: 142 GMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYND 199
           G  RA   +  E++ R+ RYR KR  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 283 GTQRAVPLTSAEREARVMRYREKRKNRKFEKTIRYASRKAYAEMRPRIKGRFAKRTD 339

[Close]

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot
Match: O50055 (Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 1.1e-05
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0


Query: 150 SPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYND 199
           SP +++ R+ RYR K+  R F K I+YA RK+ A+ RPRI+GRFA+  D
Sbjct: 282 SPRDREARVLRYREKKKMRKFEKTIRYASRKAYAEKRPRIKGRFAKKKD 330

[Close]

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot
Match: Q9LKL2 (Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=APRR1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 33/84 (39.29%), Postives = 54/84 (64.29%), Query Frame = 0


Query: 152 EEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEV---VKNYP--V 211
           + ++E + ++R KR+QR F+KKI+Y  RK LA+ RPR++G+F R  + V   +   P   
Sbjct: 531 DRREEALLKFRRKRNQRCFDKKIRYVNRKRLAERRPRVKGQFVRKMNGVNVDLNGQPDSA 590

Query: 212 QWNQHEREEEEEEEQQREANSCGD 231
            ++  E EEEEEEE+ R+++   D
Sbjct: 591 DYDDEEEEEEEEEEENRDSSPQDD 614

[Close]

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot
Match: Q9FDX8 (Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=1)

HSP 1 Score: 51.6 bits (122), Expect = 1.5e-05
Identity = 35/104 (33.65%), Postives = 53/104 (50.96%), Query Frame = 0


Query: 97  PPSAAIDPPINRPLFPAGDFQKKNNNNERGDESPVSCESSITIIEG--MSRACRYSPEEK 156
           P S  ID P +R L PAG                     +I +  G  +  +  +S  ++
Sbjct: 288 PDSTVIDMPNSRILTPAG---------------------AINLFSGPSLQMSLHFSSMDR 347

Query: 157 KERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYND 199
           + R+ RYR K+  R F K I+Y  RK+ A++RPRI+GRFA+ +D
Sbjct: 348 EARVLRYREKKKARKFEKTIRYETRKAYAEARPRIKGRFAKRSD 370

[Close]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL
Match: A0A0A0KG14 (CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV=1)

HSP 1 Score: 495.7 bits (1275), Expect = 1.1e-136
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPAGDFQKKN 120
           NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFP GDFQKKN
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPVGDFQKKN 120

Query: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180
           NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK
Sbjct: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180

Query: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240
           SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY
Sbjct: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240

Query: 241 STNLIP 247
           STNLIP
Sbjct: 241 STNLIP 246

[Close]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL
Match: A0A5D3CRZ2 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001070 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.6e-116
Identity = 225/248 (90.73%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQ+
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 241

[Close]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL
Match: A0A1S3CK62 (zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 427.6 bits (1098), Expect = 3.6e-116
Identity = 225/248 (90.73%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQ+
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 241

[Close]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL
Match: A0A1S3CK56 (zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501889 PE=4 SV=1)

HSP 1 Score: 424.9 bits (1091), Expect = 2.4e-115
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQK
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQK 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 K-NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 240

[Close]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL
Match: A0A5A7SW55 (Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold228G00610 PE=4 SV=1)

HSP 1 Score: 354.8 bits (909), Expect = 3.0e-94
Identity = 195/248 (78.63%), Postives = 201/248 (81.05%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQ+
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSR                               AC
Sbjct: 121 KKNNNERGDESPVSCESSITIIEGMSR-------------------------------AC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 210

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 210

[Close]

BLAST of CSPI06G16590 vs. NCBI nr
Match: XP_011657240.1 (zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical protein Csa_023060 [Cucumis sativus])

HSP 1 Score: 495.7 bits (1275), Expect = 2.3e-136
Identity = 245/246 (99.59%), Postives = 245/246 (99.59%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPST 60

Query: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPAGDFQKKN 120
           NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFP GDFQKKN
Sbjct: 61  NNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPVGDFQKKN 120

Query: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180
           NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK
Sbjct: 121 NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRK 180

Query: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240
           SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY
Sbjct: 181 SLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTY 240

Query: 241 STNLIP 247
           STNLIP
Sbjct: 241 STNLIP 246

[Close]

BLAST of CSPI06G16590 vs. NCBI nr
Match: XP_008463852.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK14365.1 zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 427.6 bits (1098), Expect = 7.5e-116
Identity = 225/248 (90.73%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQ+
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 KKNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 241

[Close]

BLAST of CSPI06G16590 vs. NCBI nr
Match: XP_008463853.1 (PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo])

HSP 1 Score: 424.9 bits (1091), Expect = 4.9e-115
Identity = 226/248 (91.13%), Postives = 232/248 (93.55%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQK
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQK 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIKYAC
Sbjct: 121 K-NNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIKYAC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 240

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 240

[Close]

BLAST of CSPI06G16590 vs. NCBI nr
Match: XP_038902180.1 (zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida])

HSP 1 Score: 357.8 bits (917), Expect = 7.3e-95
Identity = 203/251 (80.88%), Postives = 216/251 (86.06%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSI-KLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSADLAGVDFDWLPDSSI KLWNS +FSDSCGDGSP SPP+ L IRPS
Sbjct: 1   MAFSPFLSAASHSSADLAGVDFDWLPDSSINKLWNS-EFSDSCGDGSPTSPPQSLTIRPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSA----AIDPPINRPLFPAGD 120
            NNFLLH S FP L+P SLQSND   FLQRTFSSSSPPPSA    A +  INRPLFPAGD
Sbjct: 61  NNNFLLHQS-FPHLDP-SLQSNDL--FLQRTFSSSSPPPSASAPTAANRLINRPLFPAGD 120

Query: 121 FQKKNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIK 180
           FQ+   NN+R  ESPVSCESSIT IEGMSRACRYSPEEKKERIERYRTKR+QRNFNKKIK
Sbjct: 121 FQR---NNQRA-ESPVSCESSIT-IEGMSRACRYSPEEKKERIERYRTKRNQRNFNKKIK 180

Query: 181 YACRKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKY 240
           YACRKSLADSRPRIRGRFARYND+VVKNYP+QW+ H +EEE+      EAN+CGDNWIKY
Sbjct: 181 YACRKSLADSRPRIRGRFARYNDDVVKNYPMQWS-HGQEEEQ------EANNCGDNWIKY 234

Query: 241 FIDTYSTNLIP 247
           FID YSTNLIP
Sbjct: 241 FIDAYSTNLIP 234

[Close]

BLAST of CSPI06G16590 vs. NCBI nr
Match: KAA0035270.1 (zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa])

HSP 1 Score: 354.8 bits (909), Expect = 6.2e-94
Identity = 195/248 (78.63%), Postives = 201/248 (81.05%), Query Frame = 0


Query: 1   MAFSPFLSAASHSSADLAGVDFD-WLPDSSIKLWNSDQFSDSCGDGSPPSPPEPLKIRPS 60
           MAFSPFLSAASHSSAD+AGVDFD WLPDSSIKLWNS +FSDSCGDGSPPSPPEPLKI PS
Sbjct: 1   MAFSPFLSAASHSSADIAGVDFDHWLPDSSIKLWNS-EFSDSCGDGSPPSPPEPLKIHPS 60

Query: 61  TNNFLLHPSAFPLLNPDSLQSNDTDSFLQRTFSSS-SPPPSAAIDPPINRPLFPAGDFQK 120
           TNNFLLH S FPLLN DSLQSN+ DSFLQRTFSSS SPPPSAAIDPPINRPLFPAGDFQ+
Sbjct: 61  TNNFLLHQS-FPLLNHDSLQSNN-DSFLQRTFSSSLSPPPSAAIDPPINRPLFPAGDFQQ 120

Query: 121 KNNNNERGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYAC 180
           K NNNERGDESPVSCESSITIIEGMSR                               AC
Sbjct: 121 KKNNNERGDESPVSCESSITIIEGMSR-------------------------------AC 180

Query: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFID 240
           RKSLADSRPRIRGRFARYNDEVVKNYPVQWN     + EEE+QQREANSCGDNWIKYFID
Sbjct: 181 RKSLADSRPRIRGRFARYNDEVVKNYPVQWNL----QREEEQQQREANSCGDNWIKYFID 210

Query: 241 TYSTNLIP 247
           TYS NLIP
Sbjct: 241 TYSANLIP 210

[Close]

BLAST of CSPI06G16590 vs. TAIR 10
Match: AT5G59990.1 (CCT motif family protein )

HSP 1 Score: 99.4 bits (246), Expect = 4.4e-21
Identity = 78/179 (43.58%), Postives = 104/179 (58.10%), Query Frame = 0


Query: 74  NPDSLQSNDTDSFLQRTFSSS---SPPPSAA------IDPPINRPLFPAGDFQKKNNNNE 133
           +P S+ S      +QR+ SS    S   +AA       D P+ R L  AGD  +    + 
Sbjct: 80  SPSSMGSGGESLVMQRSVSSHNGFSGNYTAAHDFVNDDDGPVRRAL-SAGDLPR----SS 139

Query: 134 RGDESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLAD 193
           R + S V  ES+  IIEGMS+A +YSPEEKKE+IE+YR+KR+ RNFNK+IKY CRK+LAD
Sbjct: 140 RRESSTVWSESN-AIIEGMSKAYKYSPEEKKEKIEKYRSKRNLRNFNKRIKYECRKTLAD 199

Query: 194 SRPRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREANSCGDNWIKYFIDTYSTN 244
           SRPRIRGRFAR NDE+              ++E+ +         D W   F+D++S N
Sbjct: 200 SRPRIRGRFAR-NDEI-------------SQQEQVDVMEAVVGDVDTWAS-FLDSFSAN 237

[Close]

BLAST of CSPI06G16590 vs. TAIR 10
Match: AT1G63820.1 (CCT motif family protein )

HSP 1 Score: 88.6 bits (218), Expect = 7.7e-18
Identity = 60/129 (46.51%), Postives = 76/129 (58.91%), Query Frame = 0


Query: 108 RPLFPAGDFQK--KNNNNERGDESPVSCESSITII----EGMSRACRYSPEEKKERIERY 167
           R ++  GD Q   ++   +R   SP++ ESS T +    E   R  RYS EE+KE+I +Y
Sbjct: 140 RRVYSTGDLQNLGRDFTGQRSYSSPLAAESSPTTVFSGDEQSLRVGRYSSEERKEKISKY 199

Query: 168 RTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVKNYPVQ------------WN 219
           R KR QRNF K IKYACRK+LAD+RPR+RGRFAR NDEV +N  +             WN
Sbjct: 200 RAKRTQRNFTKTIKYACRKTLADNRPRVRGRFAR-NDEVFENPKIASSFTRQENDDDLWN 259

[Close]

BLAST of CSPI06G16590 vs. TAIR 10
Match: AT2G33350.1 (CCT motif family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 143 MSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVK 202
           +++  + SPE++KE+I RY  KR++RNFNKKIKYACRK+LADSRPR+RGRFA+ NDE  +
Sbjct: 300 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDEFGE 359

Query: 203 NYPVQWNQHEREEEEEE 220
                ++ H  +E+E++
Sbjct: 360 PNRQAFSSHHDDEDEDD 375

[Close]

BLAST of CSPI06G16590 vs. TAIR 10
Match: AT2G33350.2 (CCT motif family protein )

HSP 1 Score: 78.2 bits (191), Expect = 1.0e-14
Identity = 41/77 (53.25%), Postives = 60/77 (77.92%), Query Frame = 0


Query: 143 MSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSRPRIRGRFARYNDEVVK 202
           +++  + SPE++KE+I RY  KR++RNFNKKIKYACRK+LADSRPR+RGRFA+ NDE  +
Sbjct: 299 LNKVGKLSPEQRKEKIRRYMKKRNERNFNKKIKYACRKTLADSRPRVRGRFAK-NDEFGE 358

Query: 203 NYPVQWNQHEREEEEEE 220
                ++ H  +E+E++
Sbjct: 359 PNRQAFSSHHDDEDEDD 374

[Close]

BLAST of CSPI06G16590 vs. TAIR 10
Match: AT5G41380.1 (CCT motif family protein )

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-14
Identity = 63/160 (39.38%), Postives = 87/160 (54.37%), Query Frame = 0


Query: 67  PSAFPLLNPDSLQSNDTDSFLQRTFSSSSPPPSAAIDPPINRPLFPAGDFQKKNNNNERG 126
           P   P+++  +L  N+  S     FSS              R ++  GD Q  N   +R 
Sbjct: 145 PFNIPMMDSSNLSYNNLSSPENAFFSSQM------------RRVYSTGDLQ-NNMEMQRS 204

Query: 127 DESPVSCESSITIIEGMSRACRYSPEEKKERIERYRTKRHQRNFNKKIKYACRKSLADSR 186
            E+     S     E   +  RYS EE+KE+I +YR KR+QRNF K IKYACRK+LADSR
Sbjct: 205 SENSTMPFSE----EQNFKVGRYSAEERKEKISKYRAKRNQRNFTKTIKYACRKTLADSR 264

Query: 187 PRIRGRFARYNDEVVKNYPVQWNQHEREEEEEEEQQREAN 227
           PRIRGRFAR NDEVV+   ++ +  E  + +   ++ EA+
Sbjct: 265 PRIRGRFAR-NDEVVEIPNIEDDDSELWKLDGLHEKEEAS 286

The following BLAST results are available for this feature:

BLAST of CSPI06G16590 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK53	1.7e-06	52.83	Zinc finger protein CONSTANS-LIKE 3 OS=Arabidopsis thaliana OX=3702 GN=COL3 PE=1...	[more]
Q940T9	5.1e-06	49.12	Zinc finger protein CONSTANS-LIKE 4 OS=Arabidopsis thaliana OX=3702 GN=COL4 PE=2...	[more]
O50055	1.1e-05	51.02	Zinc finger protein CONSTANS-LIKE 1 OS=Arabidopsis thaliana OX=3702 GN=COL1 PE=1...	[more]
Q9LKL2	1.5e-05	39.29	Two-component response regulator-like APRR1 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
Q9FDX8	1.5e-05	33.65	Zinc finger protein HD1 OS=Oryza sativa subsp. japonica OX=39947 GN=HD1 PE=1 SV=...	[more]

BLAST of CSPI06G16590 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KG14	1.1e-136	99.59	CCT domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G301610 PE=4 SV...	[more]
A0A5D3CRZ2	3.6e-116	90.73	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]
A0A1S3CK62	3.6e-116	90.73	zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A1S3CK56	2.4e-115	91.13	zinc finger protein CONSTANS-LIKE 1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
A0A5A7SW55	3.0e-94	78.63	Zinc finger protein CONSTANS-LIKE 1 isoform X1 OS=Cucumis melo var. makuwa OX=11...	[more]

BLAST of CSPI06G16590 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011657240.1	2.3e-136	99.59	zinc finger protein CONSTANS-LIKE 5 [Cucumis sativus] >KGN47342.1 hypothetical p...	[more]
XP_008463852.1	7.5e-116	90.73	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo] >TYK143...	[more]
XP_008463853.1	4.9e-115	91.13	PREDICTED: zinc finger protein CONSTANS-LIKE 1 isoform X2 [Cucumis melo]	[more]
XP_038902180.1	7.3e-95	80.88	zinc finger protein CONSTANS-LIKE 5-like [Benincasa hispida]	[more]
KAA0035270.1	6.2e-94	78.63	zinc finger protein CONSTANS-LIKE 1 isoform X1 [Cucumis melo var. makuwa]	[more]

BLAST of CSPI06G16590 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G59990.1	4.4e-21	43.58	CCT motif family protein	[more]
AT1G63820.1	7.7e-18	46.51	CCT motif family protein	[more]
AT2G33350.1	1.0e-14	53.25	CCT motif family protein	[more]
AT2G33350.2	1.0e-14	53.25	CCT motif family protein	[more]
AT5G41380.1	1.8e-14	39.38	CCT motif family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 211..231
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..133
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 36..60
None	No IPR available	PANTHER	PTHR31319	ZINC FINGER PROTEIN CONSTANS-LIKE 4	coord: 59..220
None	No IPR available	PANTHER	PTHR31319:SF46	CCT MOTIF FAMILY PROTEIN	coord: 59..220
IPR010402	CCT domain	PFAM	PF06203	CCT	coord: 155..195 e-value: 3.6E-17 score: 62.2
IPR010402	CCT domain	PROSITE	PS51017	CCT	coord: 154..196 score: 15.318611

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G16590.1	CSPI06G16590.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0009909	regulation of flower development
cellular_component	GO:0005634	nucleus
molecular_function	GO:0005515	protein binding