CSPI06G16230 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G16230
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING/U-box protein
Location	Chr6: 14648973 .. 14651644 (+)
RNA-Seq Expression	CSPI06G16230
Synteny	CSPI06G16230

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AGGAAATGAGTAATTACTGAGTCATTCGAAAAGTTTAAAAGAGCCGCCAATTGGAATCGGTAACCACATTTAGAGCAGCGTTTCTCGTTGGAATCCATGGCGTCCGGAGCAACGAACATCGATTCCGACCTAAACGACGATGAACTCGCTTACGACTTGCAAATGGAGGAAGTCATTGCCGCTTCACTCAATTTACTCCCCTCTACTTCTCACTCTCCTCCACCATCCACTTCATCTCGACCATCGCCATTCCCCGATGATGATTCCGAGAATCACGATGCGGTAATGTTATCGGACGATGATACTTCGCTGGGCGACGACGGGTTGGATCATCGGCTTAATGACCTCGTTGCCGGAGACTTTATCAACGTCTCCGATGATGAGTGGGGAGGCTACGATTGGATGTCCTACCGTACGAGTGTATCTGCTCTCAAGTTATGTAATCCTTTGTTTGATCCCGAGGGTTCCAGATTGTATTTCAAGGGTTTGGTTAACGAAGATAGTGTCAGAGACGAAACCGTGACTGTGGTGGCTGTTTTTGATCCGAGAGAGAATTTATTGATGGAAGTGAAGAGTCCATTGAAGACTGTTAGAGAACGCATGGCTATCAGTCCAGTGGTTGCTGAGCTTATGGCTTTGATCGAAGGGCTTGAAGCTGCTCTTGTTTTTCCTTTGAGAAGAGTTTCCTTCTTCTGCGATGACCGTGCGCTTTACCGATATGTAAGTTAGTATACTCATCATTTTCACTATTTTTAAACATTTCGAACAAAAATTGTCATTTCTGATGAATTAGATTTATCAATATTTGGATCGTTGCTAAAATTTTTAGTACATGCTTGCTTCATATGATATTTGATTCTGCCCTTTTCATTGTACATTGGCGACCCACCATTGGAACACTCAAGTAGTGATCTGAAAAGAAAGTGACACTGTTGAAAATTCTCTGTTCATTTCTTTTTTAATTCTAGAACTCTTTGCCACTGTTGTTGTCTGTTGATTTGATACTAATTCTTTCCTTATCCTTCAAGACGCCCTATGGTTCCTTTGTTGGACTGTTGCGAGTCATGATTCTGTTCAACTTTTAGATTCAACAGCAGAATTATTTAGTACTATGTGTGATTACTGAATGCAGATTACAGGCAGATTAAGGCCAAAACTGAAGGAGGTTGAAAGATTAGTCGACCAAGTGGGTCTTCTACGAGGGTACTTCAGTTATTGTGAGCCCTTTTTGGTAGAACGAAATGATGTGAAATATGCCTTTAGATTAGCAAATTGCTACCCTGCTATAGAAACTGAGGACAATAGGAAGTTTGTGGAGAATTGTAAGATTTGTTATGAAGATAGGGAATTGGATCAAATGTTTACAATAGATGATTGCCTTCACCGATACTGTTTTTCTTGCACGAGAAAGCATGTAGAAGTGAAGTTTCTTGGTGGTTCTGTGGCAAAATGTCCTCATGAAGGCTGTGAATCTGTAGTGAAAGTTGAGAGTTGTGATAAGCTTCTCCCACCCAATGTAATTGAAATCATACAACAACGCTTAAAGGAATCTTCCATCCCCTTTTCAGATAAAGTTTATTGCCCACAACCTAGATGCTCTGCTTTGATGTCAAAAACTGAAGTTTTGGAGTATACCAAAGATATTCATGAGAATGCAGAGCACTCTGGCACCAGGAAATGCGTGAAATGCCACCAACTTTTTTGCATCAAATGCAAATCCTCCTGGCACGTCAATATGACTTGTGAGGCCTACAAGAAGTCAATCCATAACACTCAAACAGAAGATGCGAAGCTGAAGATTCTAGCCAGAGAGAAGTTATGGCGACCATGTGCAAGATGTAGTCATTTGGTTGAACTTTCAGAAGGATGTTATCACATCATTTGCAGGTCTGCTTCCTTCGTTATCCTCCCATTTTTCTTTTTGTATATGCCTAATCTCACTCGAGTTTTTTAATATAGTCTAGTTTAATATAGTATTCGCATGAGAAGTTTTGGATTCTATGGGGTGTATGGGTCACTAACCTCTCATAAGTCAGTCTTAAATAACTCAACTTCTTTCATCGACGAGCTCCATTTTTCCCTCTTTTCCCTCTCTCTATTGTTTCCAAAATCCAGTCCAAACAACTTAGCACCTCAAACATAGACTTCCTAACTCCAACGTATTAACTCTAACTTTCAGAATATGGCTCAAACGATTGGCCCTAAAGTCATTTCTTCTGCATTCCAGTCAATATTGAAAACTACCAACTAGGTTAATTGCTATTTCAAACCTACATTGTAGACAGTGGTGGGGCTTGTTTGGAATGACTTAATGAGTTGCAAAAAGTGATTTTAAATACTTTGATAGTCATTTCAAGTAGGCTCATTTTATGCTTTGAGCTTTTGAGCATAGTGATATAACGGTTTTTGTACTCGTGGTTAATGTGAGGGGGTTATTTTTCTTCAGATGTGGACATGAGTTTTGCTATTCTTGTGGAGCTGAATGGAAGAACAAGCAACGAACGTGTTCATGTCCCATATGGGACGAAGAGAACATCATAAATGATGAACTGTGAAAGGACCAATCCAATCGGAGGTGACAGTTTGTGAGATTTGCTTGAAGAATTCAAATGGTTTCGGTAAATATTTTTTACTTTCCTATGGAATTAGTTAAGATTATAGTACCTGCAGGC

mRNA sequence

AGGAAATGAGTAATTACTGAGTCATTCGAAAAGTTTAAAAGAGCCGCCAATTGGAATCGGTAACCACATTTAGAGCAGCGTTTCTCGTTGGAATCCATGGCGTCCGGAGCAACGAACATCGATTCCGACCTAAACGACGATGAACTCGCTTACGACTTGCAAATGGAGGAAGTCATTGCCGCTTCACTCAATTTACTCCCCTCTACTTCTCACTCTCCTCCACCATCCACTTCATCTCGACCATCGCCATTCCCCGATGATGATTCCGAGAATCACGATGCGGTAATGTTATCGGACGATGATACTTCGCTGGGCGACGACGGGTTGGATCATCGGCTTAATGACCTCGTTGCCGGAGACTTTATCAACGTCTCCGATGATGAGTGGGGAGGCTACGATTGGATGTCCTACCGTACGAGTGTATCTGCTCTCAAGTTATGTAATCCTTTGTTTGATCCCGAGGGTTCCAGATTGTATTTCAAGGGTTTGGTTAACGAAGATAGTGTCAGAGACGAAACCGTGACTGTGGTGGCTGTTTTTGATCCGAGAGAGAATTTATTGATGGAAGTGAAGAGTCCATTGAAGACTGTTAGAGAACGCATGGCTATCAGTCCAGTGGTTGCTGAGCTTATGGCTTTGATCGAAGGGCTTGAAGCTGCTCTTGTTTTTCCTTTGAGAAGAGTTTCCTTCTTCTGCGATGACCGTGCGCTTTACCGATATATTACAGGCAGATTAAGGCCAAAACTGAAGGAGGTTGAAAGATTAGTCGACCAAGTGGGTCTTCTACGAGGGTACTTCAGTTATTGTGAGCCCTTTTTGGTAGAACGAAATGATGTGAAATATGCCTTTAGATTAGCAAATTGCTACCCTGCTATAGAAACTGAGGACAATAGGAAGTTTGTGGAGAATTGTAAGATTTGTTATGAAGATAGGGAATTGGATCAAATGTTTACAATAGATGATTGCCTTCACCGATACTGTTTTTCTTGCACGAGAAAGCATGTAGAAGTGAAGTTTCTTGGTGGTTCTGTGGCAAAATGTCCTCATGAAGGCTGTGAATCTGTAGTGAAAGTTGAGAGTTGTGATAAGCTTCTCCCACCCAATGTAATTGAAATCATACAACAACGCTTAAAGGAATCTTCCATCCCCTTTTCAGATAAAGTTTATTGCCCACAACCTAGATGCTCTGCTTTGATGTCAAAAACTGAAGTTTTGGAGTATACCAAAGATATTCATGAGAATGCAGAGCACTCTGGCACCAGGAAATGCGTGAAATGCCACCAACTTTTTTGCATCAAATGCAAATCCTCCTGGCACGTCAATATGACTTGTGAGGCCTACAAGAAGTCAATCCATAACACTCAAACAGAAGATGCGAAGCTGAAGATTCTAGCCAGAGAGAAGTTATGGCGACCATGTGCAAGATGTAGTCATTTGGTTGAACTTTCAGAAGGATGTTATCACATCATTTGCAGATGTGGACATGAGTTTTGCTATTCTTGTGGAGCTGAATGGAAGAACAAGCAACGAACGTGTTCATGTCCCATATGGGACGAAGAGAACATCATAAATGATGAACTGTGAAAGGACCAATCCAATCGGAGGTGACAGTTTGTGAGATTTGCTTGAAGAATTCAAATGGTTTCGGTAAATATTTTTTACTTTCCTATGGAATTAGTTAAGATTATAGTACCTGCAGGC

Coding sequence (CDS)

ATGGCGTCCGGAGCAACGAACATCGATTCCGACCTAAACGACGATGAACTCGCTTACGACTTGCAAATGGAGGAAGTCATTGCCGCTTCACTCAATTTACTCCCCTCTACTTCTCACTCTCCTCCACCATCCACTTCATCTCGACCATCGCCATTCCCCGATGATGATTCCGAGAATCACGATGCGGTAATGTTATCGGACGATGATACTTCGCTGGGCGACGACGGGTTGGATCATCGGCTTAATGACCTCGTTGCCGGAGACTTTATCAACGTCTCCGATGATGAGTGGGGAGGCTACGATTGGATGTCCTACCGTACGAGTGTATCTGCTCTCAAGTTATGTAATCCTTTGTTTGATCCCGAGGGTTCCAGATTGTATTTCAAGGGTTTGGTTAACGAAGATAGTGTCAGAGACGAAACCGTGACTGTGGTGGCTGTTTTTGATCCGAGAGAGAATTTATTGATGGAAGTGAAGAGTCCATTGAAGACTGTTAGAGAACGCATGGCTATCAGTCCAGTGGTTGCTGAGCTTATGGCTTTGATCGAAGGGCTTGAAGCTGCTCTTGTTTTTCCTTTGAGAAGAGTTTCCTTCTTCTGCGATGACCGTGCGCTTTACCGATATATTACAGGCAGATTAAGGCCAAAACTGAAGGAGGTTGAAAGATTAGTCGACCAAGTGGGTCTTCTACGAGGGTACTTCAGTTATTGTGAGCCCTTTTTGGTAGAACGAAATGATGTGAAATATGCCTTTAGATTAGCAAATTGCTACCCTGCTATAGAAACTGAGGACAATAGGAAGTTTGTGGAGAATTGTAAGATTTGTTATGAAGATAGGGAATTGGATCAAATGTTTACAATAGATGATTGCCTTCACCGATACTGTTTTTCTTGCACGAGAAAGCATGTAGAAGTGAAGTTTCTTGGTGGTTCTGTGGCAAAATGTCCTCATGAAGGCTGTGAATCTGTAGTGAAAGTTGAGAGTTGTGATAAGCTTCTCCCACCCAATGTAATTGAAATCATACAACAACGCTTAAAGGAATCTTCCATCCCCTTTTCAGATAAAGTTTATTGCCCACAACCTAGATGCTCTGCTTTGATGTCAAAAACTGAAGTTTTGGAGTATACCAAAGATATTCATGAGAATGCAGAGCACTCTGGCACCAGGAAATGCGTGAAATGCCACCAACTTTTTTGCATCAAATGCAAATCCTCCTGGCACGTCAATATGACTTGTGAGGCCTACAAGAAGTCAATCCATAACACTCAAACAGAAGATGCGAAGCTGAAGATTCTAGCCAGAGAGAAGTTATGGCGACCATGTGCAAGATGTAGTCATTTGGTTGAACTTTCAGAAGGATGTTATCACATCATTTGCAGATGTGGACATGAGTTTTGCTATTCTTGTGGAGCTGAATGGAAGAACAAGCAACGAACGTGTTCATGTCCCATATGGGACGAAGAGAACATCATAAATGATGAACTGTGA

Protein sequence

MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENHDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFDPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPFLVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTCSCPIWDEENIINDEL*

Homology

[Close]

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot
Match: F4KGU4 (ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At5g10370 PE=3 SV=1)

HSP 1 Score: 81.6 bits (200), Expect = 2.7e-14
Identity = 52/202 (25.74%), Postives = 84/202 (41.58%), Query Frame = 0


Query: 272  CKICYEDRELDQMFTIDDCLHRYCFSCTRKHVE--VKFLGGSVAKCPHEGCESVVKVESC 331
            C IC    E+D  ++++ C H +C +C  +  E  ++        C H  C + + +   
Sbjct: 1564 CPICLS--EVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVLADM 1623

Query: 332  DKLLPPNVIEIIQQRLKESSIPFSDKV--YCPQPRCSALMSKTEVLEYTKDIHENAEHSG 391
              LL    ++ +      S +  SD    +C  P C ++            +    E   
Sbjct: 1624 RALLSQEKLDELFSASLSSFVTSSDGKFRFCSTPDCPSVYR----------VAGPQESGE 1683

Query: 392  TRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHL 451
               C  CH   C +C   +H  +TCE YKK   N    D  LK  A+ K  + C  C   
Sbjct: 1684 PFICGACHSEICTRCHLEYHPLITCERYKKFKEN---PDLSLKDWAKGKNVKECPICKST 1743

Query: 452  VELSEGCYHIICRCGHEFCYSC 470
            +E ++GC H+ CRCG   C++C
Sbjct: 1744 IEKTDGCNHMKCRCGKHICWTC 1750

[Close]

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot
Match: P0CE10 (ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At4g01020 PE=3 SV=1)

HSP 1 Score: 81.3 bits (199), Expect = 3.5e-14
Identity = 54/202 (26.73%), Postives = 84/202 (41.58%), Query Frame = 0


Query: 272  CKICYEDRELDQMFTIDDCLHRYCFSCTRKHVE--VKFLGGSVAKCPHEGCESVVKVESC 331
            C IC    E+D  ++++ C H +C +C  +  E  ++        C H  C + + V   
Sbjct: 1561 CPICLS--EVDDGYSLEGCSHLFCKACLLEQFEASMRNFDAFPILCSHIDCGAPIVVADM 1620

Query: 332  DKLLPPNVI-EIIQQRLKESSIPFSDKV-YCPQPRCSALMSKTEVLEYTKDIHENAEHSG 391
              LL    + E+I   L         K+ +C  P C ++            +    E   
Sbjct: 1621 RALLSQEKLDELISASLSAFVTSSDGKLRFCSTPDCPSIYR----------VAGPQESGE 1680

Query: 392  TRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHL 451
               C  CH   C +C   +H  +TCE YKK   N    D  LK  A+ K  + C  C   
Sbjct: 1681 PFICGACHSETCTRCHLEYHPLITCERYKKFKEN---PDLSLKDWAKGKDVKECPICKST 1740

Query: 452  VELSEGCYHIICRCGHEFCYSC 470
            +E ++GC H+ CRCG   C++C
Sbjct: 1741 IEKTDGCNHLQCRCGKHICWTC 1747

[Close]

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot
Match: Q22431 (Potential E3 ubiquitin-protein ligase ariadne-2 OS=Caenorhabditis elegans OX=6239 GN=ari-2 PE=3 SV=2)

HSP 1 Score: 80.5 bits (197), Expect = 5.9e-14
Identity = 62/249 (24.90%), Postives = 100/249 (40.16%), Query Frame = 0


Query: 243 ERNDVKYAFRLANCYPAIETEDNRKFVEN--------CKICYED--RELDQMFTIDDCLH 302
           +RND      L  C+   + E  RK            C +C  D   EL  +     C H
Sbjct: 97  DRNDF-----LRKCHIDAKPEPKRKLSSTQSVLAKGYCSVCAMDGYTELPHL----TCGH 156

Query: 303 RYCFSCTRKHVEVKFLGG--SVAKCPHEGCESVVKVESCDKLLPPN-VIEIIQQR--LKE 362
            +C  C + HVE +   G  S  +C    CE     E    ++  + VI++  +R  L++
Sbjct: 157 CFCEHCWKSHVESRLSEGVASRIECMESECEVYAPSEFVLSIIKNSPVIKLKYERFLLRD 216

Query: 363 SSIPFSDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWH 422
                    +C    C  ++  TEV                  C++CH  FC+KC + +H
Sbjct: 217 MVNSHPHLKFCVGNECPVIIRSTEV------------KPKRVTCMQCHTSFCVKCGADYH 276

Query: 423 VNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIIC-RCGHEFC 476
              +CE  K+ +     +      ++     + C +C   +E + GC HI C RC H FC
Sbjct: 277 APTSCETIKQWMTKCADDSETANYISAHT--KDCPQCHSCIEKAGGCNHIQCTRCRHHFC 322

[Close]

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot
Match: P50876 (E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens OX=9606 GN=RNF144A PE=1 SV=2)

HSP 1 Score: 77.8 bits (190), Expect = 3.9e-13
Identity = 48/206 (23.30%), Postives = 89/206 (43.20%), Query Frame = 0


Query: 271 NCKICYEDRELDQMFTIDDCLHRYCFSCTRKHVEVKFLGG--SVAKCPHEGC--ESVVKV 330
           +CK+C  +  ++QM TI  C   +C  C +++VE+    G  +   CP   C  +  ++ 
Sbjct: 19  SCKLCLGEYPVEQMTTIAQCQCIFCTLCLKQYVELLIKEGLETAISCPDAACPKQGHLQE 78

Query: 331 ESCDKLLPPNVIEIIQQRLKESSIPFSD-KVYCPQPRCSALMSKTEV-LEYTKDIHENAE 390
              + ++   +++  ++   E  + F   + +CP   C A+    +V L+  + +     
Sbjct: 79  NEIECMVAAEIMQRYKKLQFEREVLFDPCRTWCPASTCQAVCQLQDVGLQTPQPV----- 138

Query: 391 HSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARC 450
                +C  C   FC  CK+SWH    C              A  K+   +   + C +C
Sbjct: 139 -----QCKACRMEFCSTCKASWHPGQGCPETMPITFLPGETSAAFKMEEDDAPIKRCPKC 198

Query: 451 SHLVELSEGCYHIICR-CGHEFCYSC 470
              +E  EGC  ++C+ C H FC+ C
Sbjct: 199 KVYIERDEGCAQMMCKNCKHAFCWYC 214

[Close]

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot
Match: Q5RFV4 (Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio OX=7955 GN=rnf144aa PE=3 SV=1)

HSP 1 Score: 73.9 bits (180), Expect = 5.6e-12
Identity = 49/215 (22.79%), Postives = 86/215 (40.00%), Query Frame = 0


Query: 271 NCKICYEDRELDQMFTIDDCLHRYCFSCTRKHVEVKFLGG--SVAKCPHEGC--ESVVKV 330
           +CK+C  +  L+QM TI  C   +C  C +++VE+    G  +   CP   C     ++ 
Sbjct: 19  SCKLCLGEFPLEQMTTITQCQCVFCTMCLKQYVELLIKEGFETAISCPDSACPKRGHLQE 78

Query: 331 ESCDKLLPPNVIEIIQQRLKESSIPFS-DKVYCPQPRCSALMSKTEVLEYTKDIHENAEH 390
              + ++   +++  ++   E  +     + +CP   C A+    E          +   
Sbjct: 79  NEIECMVATEIMQRYRKLQFEKEVLLDPSRTWCPSSTCQAVCQLKE---------SDTVL 138

Query: 391 SGTRKCVKCHQLFCIKCKSSWHVNMTCE----------AYKKSIHNTQTEDAKLKILARE 450
               +C  C   FC  CK+SWH +  C+              S      +DA +K     
Sbjct: 139 PQLVRCSVCTLEFCSACKASWHPDQDCQENVPITSFLPGESSSFFKADDDDAPIK----- 198

Query: 451 KLWRPCARCSHLVELSEGCYHIICR-CGHEFCYSC 470
                C +C   +E  EGC  ++C+ C H FC+ C
Sbjct: 199 ----RCPKCKVYIERDEGCAQMMCKNCKHAFCWYC 215

[Close]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL
Match: A0A0A0KC52 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290810 PE=3 SV=1)

HSP 1 Score: 1016.5 bits (2627), Expect = 3.7e-293
Identity = 488/495 (98.59%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH
Sbjct: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120
           DAVMLSDDD S+GDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD
Sbjct: 61  DAVMLSDDDASVGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120

Query: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMA 180
           PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPL+TVRERMAI+PVVAELMA
Sbjct: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLETVRERMAINPVVAELMA 180

Query: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240
           LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF
Sbjct: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240

Query: 241 LVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300
           LVERNDVKYAFRLANCYPAIET+D+RKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR
Sbjct: 241 LVERNDVKYAFRLANCYPAIETKDSRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300

Query: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360
           KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ
Sbjct: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360

Query: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIH 420
           PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCE YKKSIH
Sbjct: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEVYKKSIH 420

Query: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480
           NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC
Sbjct: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480

Query: 481 SCPIWDEENIINDEL 496
           SCPIWDEENIINDEL
Sbjct: 481 SCPIWDEENIINDEL 495

[Close]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL
Match: A0A5A7T1R8 (E3 ubiquitin-protein ligase dbl4-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00560 PE=3 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 3.2e-273
Identity = 455/495 (91.92%), Postives = 477/495 (96.36%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MASGATNIDSDL+DDELAYDLQMEEVIAASLN LPSTSHSPPPSTSSRPSPFPDDDSENH
Sbjct: 1   MASGATNIDSDLDDDELAYDLQMEEVIAASLNFLPSTSHSPPPSTSSRPSPFPDDDSENH 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120
           DA+ML DDD S+GDDGL+HRLNDLVA DFINVSDDEWGGYDWMSYRTS+SALKLCNPLFD
Sbjct: 61  DAIMLLDDDASVGDDGLEHRLNDLVAEDFINVSDDEWGGYDWMSYRTSMSALKLCNPLFD 120

Query: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMA 180
           P+ SRLYFKGLVNE+SVRDETVTVVAVFDPRENL+MEVK PL+TVRER AISPVVAELMA
Sbjct: 121 PDSSRLYFKGLVNEESVRDETVTVVAVFDPRENLMMEVKRPLETVRERGAISPVVAELMA 180

Query: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240
           LIEGLEAALVFPL+RVSFFCDDRALYRYITGRLRPKL+EVERLVDQVGLLRGYFSYCEPF
Sbjct: 181 LIEGLEAALVFPLKRVSFFCDDRALYRYITGRLRPKLREVERLVDQVGLLRGYFSYCEPF 240

Query: 241 LVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300
           LVE NDVKYAF LAN +PAIET D+RKFVENCKICYEDRELDQMFTID CLHRYCFSC R
Sbjct: 241 LVEPNDVKYAFSLANGFPAIETGDSRKFVENCKICYEDRELDQMFTIDGCLHRYCFSCMR 300

Query: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360
           KHVEVKFLGGSVAKCPHEGCES+V+VESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ
Sbjct: 301 KHVEVKFLGGSVAKCPHEGCESIVRVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360

Query: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIH 420
           PRCSALMSKTEVLEYTK+I++NA+ SGTRKCVKCHQLFCIKCK+SWHVNMTCEAYKKS H
Sbjct: 361 PRCSALMSKTEVLEYTKEIYKNAKQSGTRKCVKCHQLFCIKCKASWHVNMTCEAYKKSSH 420

Query: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480
           NTQT DAKLKILAREKLWR CARCSHLVELSEGCYHIICRCG+EFCY+CGAEWKNKQ TC
Sbjct: 421 NTQTADAKLKILAREKLWRTCARCSHLVELSEGCYHIICRCGYEFCYTCGAEWKNKQPTC 480

Query: 481 SCPIWDEENIINDEL 496
           SCPIWDEENIINDEL
Sbjct: 481 SCPIWDEENIINDEL 495

[Close]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL
Match: A0A1S3CKS8 (E3 ubiquitin-protein ligase dbl4-like OS=Cucumis melo OX=3656 GN=LOC103501923 PE=3 SV=1)

HSP 1 Score: 950.3 bits (2455), Expect = 3.2e-273
Identity = 455/495 (91.92%), Postives = 477/495 (96.36%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MASGATNIDSDL+DDELAYDLQMEEVIAASLN LPSTSHSPPPSTSSRPSPFPDDDSENH
Sbjct: 1   MASGATNIDSDLDDDELAYDLQMEEVIAASLNFLPSTSHSPPPSTSSRPSPFPDDDSENH 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120
           DA+ML DDD S+GDDGL+HRLNDLVA DFINVSDDEWGGYDWMSYRTS+SALKLCNPLFD
Sbjct: 61  DAIMLLDDDASVGDDGLEHRLNDLVAEDFINVSDDEWGGYDWMSYRTSMSALKLCNPLFD 120

Query: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMA 180
           P+ SRLYFKGLVNE+SVRDETVTVVAVFDPRENL+MEVK PL+TVRER AISPVVAELMA
Sbjct: 121 PDSSRLYFKGLVNEESVRDETVTVVAVFDPRENLMMEVKRPLETVRERGAISPVVAELMA 180

Query: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240
           LIEGLEAALVFPL+RVSFFCDDRALYRYITGRLRPKL+EVERLVDQVGLLRGYFSYCEPF
Sbjct: 181 LIEGLEAALVFPLKRVSFFCDDRALYRYITGRLRPKLREVERLVDQVGLLRGYFSYCEPF 240

Query: 241 LVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300
           LVE NDVKYAF LAN +PAIET D+RKFVENCKICYEDRELDQMFTID CLHRYCFSC R
Sbjct: 241 LVEPNDVKYAFSLANGFPAIETGDSRKFVENCKICYEDRELDQMFTIDGCLHRYCFSCMR 300

Query: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360
           KHVEVKFLGGSVAKCPHEGCES+V+VESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ
Sbjct: 301 KHVEVKFLGGSVAKCPHEGCESIVRVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360

Query: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIH 420
           PRCSALMSKTEVLEYTK+I++NA+ SGTRKCVKCHQLFCIKCK+SWHVNMTCEAYKKS H
Sbjct: 361 PRCSALMSKTEVLEYTKEIYKNAKQSGTRKCVKCHQLFCIKCKASWHVNMTCEAYKKSSH 420

Query: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480
           NTQT DAKLKILAREKLWR CARCSHLVELSEGCYHIICRCG+EFCY+CGAEWKNKQ TC
Sbjct: 421 NTQTADAKLKILAREKLWRTCARCSHLVELSEGCYHIICRCGYEFCYTCGAEWKNKQPTC 480

Query: 481 SCPIWDEENIINDEL 496
           SCPIWDEENIINDEL
Sbjct: 481 SCPIWDEENIINDEL 495

[Close]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL
Match: A0A6J1CFU0 (uncharacterized protein LOC111011041 OS=Momordica charantia OX=3673 GN=LOC111011041 PE=3 SV=1)

HSP 1 Score: 634.0 bits (1634), Expect = 5.1e-178
Identity = 323/504 (64.09%), Postives = 390/504 (77.38%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDD---DS 60
           MA+GAT  D+DL DDELA+DLQMEE IAASL LLPSTSHSPP S+SSRPS F  D   D 
Sbjct: 1   MAAGATYFDADL-DDELAFDLQMEEAIAASLALLPSTSHSPPSSSSSRPSRFLVDHRADC 60

Query: 61  ENHDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSAL-KLCN 120
           E  DA+++SD+D +L D G   RL++LVAGD IN+SDDE   +D   Y T VSA+    N
Sbjct: 61  EIPDAILISDND-ALEDGG---RLHNLVAGDTINISDDERDDFD-SPYGTDVSAVGSSRN 120

Query: 121 PLFDPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVA 180
            LF+ E  +LYFKGL++E SV D  V V A+FD R+NLL+EV  PL+ VRE  A+S  +A
Sbjct: 121 ALFNTECCKLYFKGLISEKSVEDAMVIVAAIFDSRDNLLIEVSKPLEAVRESKALSHKLA 180

Query: 181 ELMALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSY 240
            L ALIEGLEAALV PL RVSFFCDD  +Y+Y++GR+RP+  +V  LV++V LLRG F+Y
Sbjct: 181 YLRALIEGLEAALVLPLERVSFFCDDHTIYKYVSGRVRPRESKVAALVEKVTLLRGKFTY 240

Query: 241 CEPFLVERNDVKYAFRLAN-------CYPAIETEDNRKFV--ENCKICYEDRELDQMFTI 300
           CEP L  ++D K+AF+ +           A +T   RK +  ENCKIC+ED +L QMFT+
Sbjct: 241 CEPILAAKDDEKFAFKFSKDATASQVRLRAAKTGKCRKLLEKENCKICFEDTKLCQMFTV 300

Query: 301 DDCLHRYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKE 360
           D CLHRYCFSC ++H+EVKFL GS AKCPHEGCES++ +ESC+KLLPP VIEII QR KE
Sbjct: 301 DGCLHRYCFSCMKQHIEVKFLAGSEAKCPHEGCESILSIESCNKLLPPEVIEIIIQRFKE 360

Query: 361 SSIPFSDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWH 420
           SSIP S+KVYCP+PRCSALMSKTEVLEYTK++H NA+ SG R+C+KCH+LFCI CK SWH
Sbjct: 361 SSIPVSEKVYCPRPRCSALMSKTEVLEYTKNMHGNAKQSGARECMKCHRLFCINCKISWH 420

Query: 421 VNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCY 480
             MTC+ Y+ S +  QTEDAKLK LAREKLWRPCARCSHLVEL+EGCYHIICRCG+EFCY
Sbjct: 421 DGMTCKDYQNSSYKNQTEDAKLKSLAREKLWRPCARCSHLVELAEGCYHIICRCGYEFCY 480

Query: 481 SCGAEWKNKQRTCSCPIWDEENII 492
           +CGAEWKNK+ TC+CPIW E NII
Sbjct: 481 TCGAEWKNKKPTCACPIWHEHNII 498

[Close]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL
Match: A0A6J1L2U7 (probable E3 ubiquitin-protein ligase ARI9 OS=Cucurbita maxima OX=3661 GN=LOC111499905 PE=3 SV=1)

HSP 1 Score: 615.1 bits (1585), Expect = 2.5e-172
Identity = 311/503 (61.83%), Postives = 365/503 (72.56%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAAS-LNLLPSTSHSPPPSTSSRPSPFPDDDSEN 60
           M  G   +DS L+DDELAYDLQ++EVIA S     P TS+SPPPS SSR SPF DDD+E 
Sbjct: 1   MVDGTVILDSGLDDDELAYDLQLKEVIALSQTQFSPPTSYSPPPSASSRSSPFLDDDNEM 60

Query: 61  HDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDW-MSYRTSVSALKLCNPL 120
             A  L    T                      SDD+  GYD+ M   T VSA  L +PL
Sbjct: 61  RYATNLWTYLT----------------------SDDDRMGYDYRMPSDTDVSA--LLDPL 120

Query: 121 FDPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAEL 180
           FD E  RLYFKGLV +++  D T+  VAVFD R++LL+ V+ PL+  RE  A+SP VAEL
Sbjct: 121 FDSESYRLYFKGLVGKETAGDVTIIAVAVFDSRDDLLIHVRKPLEAARENEAVSPEVAEL 180

Query: 181 MALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCE 240
           MALIEGLEAA    L RVSFFCDD  L++Y+TGRLRPKL ++  LV++V  LR  FSYCE
Sbjct: 181 MALIEGLEAARSLHLERVSFFCDDYMLHQYVTGRLRPKLSKIASLVEKVAFLRMQFSYCE 240

Query: 241 PFLVERNDVKYAFRLAN-------CYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCL 300
           PFLVE+N +K AF+L           P  ET +    +ENCKICY D ELDQM+T++DCL
Sbjct: 241 PFLVEQNVMKSAFKLVEQATASQITLPDAETSNTHHLLENCKICYVDNELDQMYTVNDCL 300

Query: 301 HRYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIP 360
           HRYCFSC +KHVEVKFL GS AKCPHEGC+S V +E+ +KL PP VIEII QR KESSIP
Sbjct: 301 HRYCFSCMKKHVEVKFLDGSEAKCPHEGCKSTVGIENFEKLFPPKVIEIIHQRFKESSIP 360

Query: 361 FSDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMT 420
           FS+KVYCPQPRCSALMSKTEVL+YTKDI  NAE SG RKC+KCH LFCIKCK++WH +MT
Sbjct: 361 FSEKVYCPQPRCSALMSKTEVLDYTKDILGNAEQSGARKCMKCHGLFCIKCKATWHNDMT 420

Query: 421 CEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGA 480
           CE Y+KS H T TEDAKL  LA+EKLW+PC RC HLVEL+EGC+HI+CRCGHEFCYSCGA
Sbjct: 421 CEEYRKSSHGTHTEDAKLNSLAKEKLWQPCLRCGHLVELAEGCFHIVCRCGHEFCYSCGA 479

Query: 481 EWKNKQRTCSCPIWDEENIINDE 495
           EWKN+Q TC CP+WDE  I+NDE
Sbjct: 481 EWKNRQPTCLCPMWDEHLILNDE 479

[Close]

BLAST of CSPI06G16230 vs. NCBI nr
Match: XP_004149564.1 (ATP-dependent RNA helicase DEAH12, chloroplastic [Cucumis sativus] >KGN47300.1 hypothetical protein Csa_023036 [Cucumis sativus])

HSP 1 Score: 1016.5 bits (2627), Expect = 7.6e-293
Identity = 488/495 (98.59%), Postives = 493/495 (99.60%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH
Sbjct: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120
           DAVMLSDDD S+GDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD
Sbjct: 61  DAVMLSDDDASVGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120

Query: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMA 180
           PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPL+TVRERMAI+PVVAELMA
Sbjct: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLETVRERMAINPVVAELMA 180

Query: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240
           LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF
Sbjct: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240

Query: 241 LVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300
           LVERNDVKYAFRLANCYPAIET+D+RKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR
Sbjct: 241 LVERNDVKYAFRLANCYPAIETKDSRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300

Query: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360
           KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ
Sbjct: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360

Query: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIH 420
           PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCE YKKSIH
Sbjct: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEVYKKSIH 420

Query: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480
           NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC
Sbjct: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480

Query: 481 SCPIWDEENIINDEL 496
           SCPIWDEENIINDEL
Sbjct: 481 SCPIWDEENIINDEL 495

[Close]

BLAST of CSPI06G16230 vs. NCBI nr
Match: XP_008463910.1 (PREDICTED: E3 ubiquitin-protein ligase dbl4-like [Cucumis melo] >KAA0035309.1 E3 ubiquitin-protein ligase dbl4-like [Cucumis melo var. makuwa] >TYK14327.1 E3 ubiquitin-protein ligase dbl4-like [Cucumis melo var. makuwa])

HSP 1 Score: 950.3 bits (2455), Expect = 6.7e-273
Identity = 455/495 (91.92%), Postives = 477/495 (96.36%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MASGATNIDSDL+DDELAYDLQMEEVIAASLN LPSTSHSPPPSTSSRPSPFPDDDSENH
Sbjct: 1   MASGATNIDSDLDDDELAYDLQMEEVIAASLNFLPSTSHSPPPSTSSRPSPFPDDDSENH 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNPLFD 120
           DA+ML DDD S+GDDGL+HRLNDLVA DFINVSDDEWGGYDWMSYRTS+SALKLCNPLFD
Sbjct: 61  DAIMLLDDDASVGDDGLEHRLNDLVAEDFINVSDDEWGGYDWMSYRTSMSALKLCNPLFD 120

Query: 121 PEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELMA 180
           P+ SRLYFKGLVNE+SVRDETVTVVAVFDPRENL+MEVK PL+TVRER AISPVVAELMA
Sbjct: 121 PDSSRLYFKGLVNEESVRDETVTVVAVFDPRENLMMEVKRPLETVRERGAISPVVAELMA 180

Query: 181 LIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEPF 240
           LIEGLEAALVFPL+RVSFFCDDRALYRYITGRLRPKL+EVERLVDQVGLLRGYFSYCEPF
Sbjct: 181 LIEGLEAALVFPLKRVSFFCDDRALYRYITGRLRPKLREVERLVDQVGLLRGYFSYCEPF 240

Query: 241 LVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCTR 300
           LVE NDVKYAF LAN +PAIET D+RKFVENCKICYEDRELDQMFTID CLHRYCFSC R
Sbjct: 241 LVEPNDVKYAFSLANGFPAIETGDSRKFVENCKICYEDRELDQMFTIDGCLHRYCFSCMR 300

Query: 301 KHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360
           KHVEVKFLGGSVAKCPHEGCES+V+VESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ
Sbjct: 301 KHVEVKFLGGSVAKCPHEGCESIVRVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCPQ 360

Query: 361 PRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSIH 420
           PRCSALMSKTEVLEYTK+I++NA+ SGTRKCVKCHQLFCIKCK+SWHVNMTCEAYKKS H
Sbjct: 361 PRCSALMSKTEVLEYTKEIYKNAKQSGTRKCVKCHQLFCIKCKASWHVNMTCEAYKKSSH 420

Query: 421 NTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRTC 480
           NTQT DAKLKILAREKLWR CARCSHLVELSEGCYHIICRCG+EFCY+CGAEWKNKQ TC
Sbjct: 421 NTQTADAKLKILAREKLWRTCARCSHLVELSEGCYHIICRCGYEFCYTCGAEWKNKQPTC 480

Query: 481 SCPIWDEENIINDEL 496
           SCPIWDEENIINDEL
Sbjct: 481 SCPIWDEENIINDEL 495

[Close]

BLAST of CSPI06G16230 vs. NCBI nr
Match: XP_038902119.1 (probable E3 ubiquitin-protein ligase ARI9 isoform X1 [Benincasa hispida])

HSP 1 Score: 746.9 bits (1927), Expect = 1.1e-211
Identity = 369/477 (77.36%), Postives = 405/477 (84.91%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDDDSENH 60
           MA G  NIDSDL+DDELAYDLQ+EEVIAASLN L STS  P PSTSSRPSPF DDD +N 
Sbjct: 1   MAVGEMNIDSDLDDDELAYDLQLEEVIAASLNHLSSTSQFPSPSTSSRPSPFLDDDYKNL 60

Query: 61  DAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSAL-KLCNPLF 120
           DA+ML D+D    +D LDHRL+DLVAGD INVSDDEW  YDW+S+RTSVS L  L N  F
Sbjct: 61  DAIMLLDNDALEDEDELDHRLHDLVAGDVINVSDDEWDEYDWLSFRTSVSTLDMLGNHFF 120

Query: 121 DPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAELM 180
           DPEG RLYFKGLV+E+SV D TV VVAVFD R NLLMEV+ PL+TVRER AI+PVVAELM
Sbjct: 121 DPEGFRLYFKGLVSEESVGDVTVIVVAVFDRRNNLLMEVRKPLETVREREAINPVVAELM 180

Query: 181 ALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEP 240
            LIEGLEAALVFPL RVS FCDDR LYRY+T RLRP++ +V RLV++V  LRG+F+YCEP
Sbjct: 181 TLIEGLEAALVFPLERVSIFCDDRTLYRYVTDRLRPRMSKVARLVERVSFLRGHFTYCEP 240

Query: 241 FLVERNDVKYAFRLAN----CYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYC 300
            LVERNDVK+AF LAN       A ETE +R+ +ENCKICYEDRELDQMFT+D CLHRYC
Sbjct: 241 ILVERNDVKFAFMLANEAIGFRAAAETEHSRQLLENCKICYEDRELDQMFTVDGCLHRYC 300

Query: 301 FSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDK 360
           FSC +KHVEVKFLGGS AKCPHEGCES V +ESCDKLLPPNVIEIIQQRLKESSIPFS+K
Sbjct: 301 FSCMKKHVEVKFLGGSEAKCPHEGCESTVSIESCDKLLPPNVIEIIQQRLKESSIPFSEK 360

Query: 361 VYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAY 420
           VYCPQPRCSALMSKTEVLEYTKD HENAE SG R C+KCHQLFC+KCK SWH +MTCEAY
Sbjct: 361 VYCPQPRCSALMSKTEVLEYTKDTHENAERSGVRNCMKCHQLFCVKCKISWHNSMTCEAY 420

Query: 421 KKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAE 473
            K  HNTQT DAKLK LARE LW+PCARCSHLVEL+EGCYHIICRCG+EFCYSCGAE
Sbjct: 421 WKLSHNTQTADAKLKTLARENLWQPCARCSHLVELAEGCYHIICRCGYEFCYSCGAE 477

[Close]

BLAST of CSPI06G16230 vs. NCBI nr
Match: XP_022140346.1 (uncharacterized protein LOC111011041 [Momordica charantia])

HSP 1 Score: 634.0 bits (1634), Expect = 1.1e-177
Identity = 323/504 (64.09%), Postives = 390/504 (77.38%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAASLNLLPSTSHSPPPSTSSRPSPFPDD---DS 60
           MA+GAT  D+DL DDELA+DLQMEE IAASL LLPSTSHSPP S+SSRPS F  D   D 
Sbjct: 1   MAAGATYFDADL-DDELAFDLQMEEAIAASLALLPSTSHSPPSSSSSRPSRFLVDHRADC 60

Query: 61  ENHDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSAL-KLCN 120
           E  DA+++SD+D +L D G   RL++LVAGD IN+SDDE   +D   Y T VSA+    N
Sbjct: 61  EIPDAILISDND-ALEDGG---RLHNLVAGDTINISDDERDDFD-SPYGTDVSAVGSSRN 120

Query: 121 PLFDPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVA 180
            LF+ E  +LYFKGL++E SV D  V V A+FD R+NLL+EV  PL+ VRE  A+S  +A
Sbjct: 121 ALFNTECCKLYFKGLISEKSVEDAMVIVAAIFDSRDNLLIEVSKPLEAVRESKALSHKLA 180

Query: 181 ELMALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSY 240
            L ALIEGLEAALV PL RVSFFCDD  +Y+Y++GR+RP+  +V  LV++V LLRG F+Y
Sbjct: 181 YLRALIEGLEAALVLPLERVSFFCDDHTIYKYVSGRVRPRESKVAALVEKVTLLRGKFTY 240

Query: 241 CEPFLVERNDVKYAFRLAN-------CYPAIETEDNRKFV--ENCKICYEDRELDQMFTI 300
           CEP L  ++D K+AF+ +           A +T   RK +  ENCKIC+ED +L QMFT+
Sbjct: 241 CEPILAAKDDEKFAFKFSKDATASQVRLRAAKTGKCRKLLEKENCKICFEDTKLCQMFTV 300

Query: 301 DDCLHRYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKE 360
           D CLHRYCFSC ++H+EVKFL GS AKCPHEGCES++ +ESC+KLLPP VIEII QR KE
Sbjct: 301 DGCLHRYCFSCMKQHIEVKFLAGSEAKCPHEGCESILSIESCNKLLPPEVIEIIIQRFKE 360

Query: 361 SSIPFSDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWH 420
           SSIP S+KVYCP+PRCSALMSKTEVLEYTK++H NA+ SG R+C+KCH+LFCI CK SWH
Sbjct: 361 SSIPVSEKVYCPRPRCSALMSKTEVLEYTKNMHGNAKQSGARECMKCHRLFCINCKISWH 420

Query: 421 VNMTCEAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCY 480
             MTC+ Y+ S +  QTEDAKLK LAREKLWRPCARCSHLVEL+EGCYHIICRCG+EFCY
Sbjct: 421 DGMTCKDYQNSSYKNQTEDAKLKSLAREKLWRPCARCSHLVELAEGCYHIICRCGYEFCY 480

Query: 481 SCGAEWKNKQRTCSCPIWDEENII 492
           +CGAEWKNK+ TC+CPIW E NII
Sbjct: 481 TCGAEWKNKKPTCACPIWHEHNII 498

[Close]

BLAST of CSPI06G16230 vs. NCBI nr
Match: XP_023532221.1 (ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 618.6 bits (1594), Expect = 4.6e-173
Identity = 312/500 (62.40%), Postives = 369/500 (73.80%), Query Frame = 0


Query: 1   MASGATNIDSDLNDDELAYDLQMEEVIAAS-LNLLPSTSHSPPPSTSSRPSPFPDDDSEN 60
           M  G+  +DS L+DDELAYDLQ++EVIA S     P TS+SPPPS SSR SPF DDD+E 
Sbjct: 1   MVDGSVILDSGLDDDELAYDLQLKEVIALSQTQFSPPTSYSPPPSASSRSSPFLDDDNEM 60

Query: 61  HDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDW-MSYRTSVSALKLCNPL 120
             A  L    T                      SDD+  GYD+ M   T VSA  L +PL
Sbjct: 61  RYATNLWTYLT----------------------SDDDGMGYDYRMPSDTDVSA--LLDPL 120

Query: 121 FDPEGSRLYFKGLVNEDSVRDETVTVVAVFDPRENLLMEVKSPLKTVRERMAISPVVAEL 180
           FD E  RLYFKGLV +++  D T+  VAVFD R++LL+ V+ PL+  RE  A+SP VAEL
Sbjct: 121 FDSESYRLYFKGLVGKETAGDVTIIAVAVFDSRDDLLIHVRKPLEAARENEAVSPEVAEL 180

Query: 181 MALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCE 240
           MALI+GLEAAL   L RVSFFCDD  L++Y+TGRLRPKL ++  LV++V  LR  FSYCE
Sbjct: 181 MALIKGLEAALSLHLERVSFFCDDYMLHQYVTGRLRPKLSKIASLVEKVAFLRMQFSYCE 240

Query: 241 PFLVERNDVKYAFRLANCYPA----IETEDNRKFVENCKICYEDRELDQMFTIDDCLHRY 300
           PFLVE+N +K AF+L     A     ET + +  +ENCKICY D ELDQM+T++DCLHRY
Sbjct: 241 PFLVEQNVMKSAFKLVEQATASQINAETSNTQNLLENCKICYVDNELDQMYTVNDCLHRY 300

Query: 301 CFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSD 360
           CFSC +KHVEVKFL GS AKCPHEGC+S V +E+ +KL PP VIEII QR KESSIPFS+
Sbjct: 301 CFSCMKKHVEVKFLDGSEAKCPHEGCKSTVGIENFEKLFPPKVIEIIHQRFKESSIPFSE 360

Query: 361 KVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEA 420
           KVYCPQPRCSALMSKTEVL+YTKDI  NAE SG RKC+KCH LFCIKCK++WH +MTCE 
Sbjct: 361 KVYCPQPRCSALMSKTEVLDYTKDILGNAEQSGARKCMKCHGLFCIKCKATWHNDMTCEE 420

Query: 421 YKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWK 480
           Y+KS H TQTEDAKL  LA+EKLW+PC RC HLVEL+EGC+HI+CRCGHEFCYSCGAEWK
Sbjct: 421 YRKSSHGTQTEDAKLNSLAKEKLWQPCLRCGHLVELAEGCFHIVCRCGHEFCYSCGAEWK 476

Query: 481 NKQRTCSCPIWDEENIINDE 495
           N+Q TC CP+WDE  I+NDE
Sbjct: 481 NRQPTCLCPMWDEHLILNDE 476

[Close]

BLAST of CSPI06G16230 vs. TAIR 10
Match: AT5G60250.1 (zinc finger (C3HC4-type RING finger) family protein )

HSP 1 Score: 350.5 bits (898), Expect = 2.2e-96
Identity = 170/384 (44.27%), Postives = 238/384 (61.98%), Query Frame = 0


Query: 125 RLYFKGLVNEDSVRDETVTV-----VAVFDPRENLLMEVKSPLKTVRERMAISPVVAELM 184
           RLYFKGLV++++ + +   V     VA+ D R+NLL E+K PL        +S   AEL 
Sbjct: 146 RLYFKGLVSDENGKGKMTDVVSGFGVAICDQRDNLLFEMKGPLID----NGMSRQGAELK 205

Query: 185 ALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEP 244
           ALI GL  AL   ++ + FFCD   +++Y+TG+   K K++  L+D +  +  +FS  + 
Sbjct: 206 ALIRGLTEALKLGIKHIVFFCDSYPIFQYVTGKWMAKQKKISLLLDDLQSIMQHFSSYQH 265

Query: 245 FLVERNDVKYAFRLAN---CYPAIETEDNRK----FVENCKICYEDRELDQMFTIDDCLH 304
            LV RNDVK+A++LA           ED R+      E C IC+ D   + MF++D C H
Sbjct: 266 VLVARNDVKFAYKLARESILSMVTPHEDPRQAKAVLKEECAICFNDIVAEGMFSVDKCRH 325

Query: 305 RYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPF 364
           R+CF C ++HVEVK L G   KCPH+GC+S + +++C KLL P + ++ QQRL+E++IP 
Sbjct: 326 RFCFQCVKQHVEVKLLHGMAPKCPHDGCKSELVIDACGKLLTPKLSKLWQQRLQENAIPV 385

Query: 365 SDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTC 424
           +++VYCP PRCSALMSKT++ E  K +      SG R+CV+C  LFC+ CK  WH N++C
Sbjct: 386 TERVYCPYPRCSALMSKTKISESAKSLLSLYPKSGVRRCVECRGLFCVDCKVPWHGNLSC 445

Query: 425 EAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAE 484
             YKK       +D KLK LA  K+WR C +C H++ELS+GC HI CRCGHEFCY+CG  
Sbjct: 446 TEYKKLHPEPPADDVKLKSLANNKMWRQCGKCQHMIELSQGCNHITCRCGHEFCYNCGGG 505

Query: 485 WKNKQRTC--SCPIWDEENIINDE 495
           W     TC   CP W+EE I   +
Sbjct: 506 WNKIMGTCLNRCPTWNEEYITRQD 525

[Close]

BLAST of CSPI06G16230 vs. TAIR 10
Match: AT2G25370.1 (RING/U-box superfamily protein )

HSP 1 Score: 286.2 bits (731), Expect = 5.1e-77
Identity = 147/361 (40.72%), Postives = 217/361 (60.11%), Query Frame = 0


Query: 125 RLYFKGLVNEDSVRDETVTV------VAVFDPRENLLMEVKSPLKTVRERMAISPVVAEL 184
           RL FKGLVN ++V D+          VA+ D ++NLL E+K  L+ +     IS    E+
Sbjct: 155 RLCFKGLVNYEAVADDVEKAVKAGFGVAICDEKDNLLHEIKESLRDIE----ISRRGVEI 214

Query: 185 MALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCE 244
           MAL+ GL  +    +R V  +CDD  +Y+ I GR + K K+++ LV++V  +    +  +
Sbjct: 215 MALVRGLSESFDLGMRNVVIYCDDDWIYQSIIGRGKSK-KKIDHLVEEVQGILEKMACID 274

Query: 245 PFLVERNDVKYAFRLANCYPAIETED-NRKFVENCKICYEDRELDQMFTIDDCLHRYCFS 304
             LV RNDVK+AFRLA       + D N +  E C I +E+ +++ MF  + CLHR+CF 
Sbjct: 275 AVLVARNDVKFAFRLAREAIGRNSVDVNAEQGETCGIFFEETDVEHMFVTEKCLHRHCFP 334

Query: 305 CTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVY 364
           C ++HV+VK   G+   C   GC+  + +E C K+L   +IE+ +Q++KE SIP ++++Y
Sbjct: 335 CVKQHVKVKLRSGTEPTCLEYGCKFKLTLERCSKVLTLKLIEMWKQKMKEDSIPAAERIY 394

Query: 365 CPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKK 424
           CP P CS LMSKTE       +   A+ S  R CVKC  LFCI CK   H +++ + YKK
Sbjct: 395 CPYPNCSMLMSKTE-------LSSEADLSNVRTCVKCCGLFCIDCKVPSHTDLSYDDYKK 454

Query: 425 SIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQ 479
              +   +D KLK LA +K+WR C +C H++ELS GC H+ CRCG+EFCY CG EW+ + 
Sbjct: 455 LHPDPLVDDLKLKSLANDKMWRQCVKCRHMIELSHGCNHMTCRCGYEFCYECGIEWQKRD 503

[Close]

BLAST of CSPI06G16230 vs. TAIR 10
Match: AT2G25360.1 (RING/U-box superfamily protein )

HSP 1 Score: 282.0 bits (720), Expect = 9.6e-76
Identity = 138/304 (45.39%), Postives = 196/304 (64.47%), Query Frame = 0


Query: 179 MALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCE 238
           MALI GL  +    +R+V  +CDD+ LY+YI GR + K K+V  LVD+  LL    +Y +
Sbjct: 1   MALIRGLRESFDLGIRQVVVYCDDQLLYQYIVGRGKIK-KKVVHLVDEFQLLLEEMTYTD 60

Query: 239 PFLVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQM-FTIDDCLHRYCFS 298
             L+  NDV +AF+LA    AI + D+ K  E C IC+E+ E ++M FT + C+HR+CF 
Sbjct: 61  ADLIALNDVNFAFKLAR--EAIVSRDDVK-AEICSICFEETEGERMFFTTEKCVHRHCFP 120

Query: 299 CTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVY 358
           C +++VEVK L G+V  C  +GC+  + +ESC K+L   +IE+ +Q++KE SIP ++++Y
Sbjct: 121 CVKQYVEVKLLSGTVPTCLDDGCKFKLTLESCSKVLTLELIEMWKQKMKEDSIPAAERIY 180

Query: 359 CPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKK 418
           CP P CS LMSKTE       +   ++ S  R CVKC  LFCI CK   H +++C  YKK
Sbjct: 181 CPYPNCSMLMSKTE-------LSSESDLSNDRSCVKCCGLFCIDCKVPSHSDLSCAEYKK 240

Query: 419 SIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQ 478
             H+   ++ KLK LA++K WR C  C H++ELS  C H+ CRCG++FCY C  EWKN Q
Sbjct: 241 LHHDPLVDELKLKSLAKDKKWRQCKMCRHMIELSHACNHMTCRCGYQFCYQCEVEWKNDQ 293

Query: 479 RTCS 482
           +TCS
Sbjct: 301 KTCS 293

[Close]

BLAST of CSPI06G16230 vs. TAIR 10
Match: AT5G37560.1 (RING/U-box superfamily protein )

HSP 1 Score: 269.6 bits (688), Expect = 4.9e-72
Identity = 142/367 (38.69%), Postives = 209/367 (56.95%), Query Frame = 0


Query: 125 RLYFKGLVNEDSVRDETVTV-----VAVFDPRENLLMEVKSPLKTVRERMAISPVVAELM 184
           +LYFKGLV+ ++  D+   V     VA+ D  +NL   +   L        I+   A+++
Sbjct: 37  KLYFKGLVSGETATDKKAIVKVGFGVAICDEADNLFYGMNKSL----YEAVINREEADIL 96

Query: 185 ALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRGYFSYCEP 244
           ALI GL  ++   ++ V   CDDR +Y+ I GR +P+ K V  L+++V  LRG  +    
Sbjct: 97  ALITGLYESIHRGVKNVVICCDDRQIYQTIIGREKPQQKNV-HLLEEVQRLRGRLASTGT 156

Query: 245 FLVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLHRYCFSCT 304
            LV   D  +A RLA    A+      K +  C IC +  + + M   D CLHR+CFSC 
Sbjct: 157 VLVATRDDNFALRLA--IDALVKATQEKPL-TCSICSDKTDAEHMLLNDKCLHRHCFSCV 216

Query: 305 RKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPFSDKVYCP 364
           ++ V+VK   G V  C  +GC+S + +ESC  +L P +IE+ +++++E  IP ++K+YCP
Sbjct: 217 KQQVKVKLRSGIVPPCLEDGCKSELTLESCSMVLTPKLIEMWKRKMEEDLIPDAEKIYCP 276

Query: 365 QPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTCEAYKKSI 424
              CS LMSKTE       +   AE S  R C+KC +LFCI CK  WH +++C  YK+  
Sbjct: 277 YRSCSMLMSKTE-------LSREAEQSNVRACIKCSELFCIDCKVPWHSDLSCADYKRIH 336

Query: 425 HNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAEWKNKQRT 484
                 D  LK+LA +++WR C+ C H++EL+EGC HI CRCG+EFCY CG +W  K   
Sbjct: 337 SERLVNDMMLKVLANDQMWRQCSECKHMIELTEGCNHITCRCGYEFCYRCGHKW-TKYHH 387

Query: 485 CSCPIWD 487
            SC + D
Sbjct: 397 YSCQLMD 387

[Close]

BLAST of CSPI06G16230 vs. TAIR 10
Match: AT2G21420.1 (IBR domain containing protein )

HSP 1 Score: 262.7 bits (670), Expect = 6.0e-70
Identity = 164/442 (37.10%), Postives = 229/442 (51.81%), Query Frame = 0


Query: 58  ENHDAVMLSDDDTSLGDDGLDHRLNDLVAGDFINVSDDEWGGYDWMSYRTSVSALKLCNP 117
           E HD  ++S             R++    GD  N+  +   G   ++   S S     N 
Sbjct: 2   EKHDLTLISK----------KRRIDFATTGDIPNLKGE---GVSMVAESASAS-----NI 61

Query: 118 LFDPEGSRLYFKGLVNEDSVRDETVTV-----VAVFDPRENLLMEVKSPLKTVRERMAIS 177
             D    RL+FKGLV++++  D    V     +A+ D    LL  +K   K++     I+
Sbjct: 62  FADSLVYRLFFKGLVSDETTTDMEEIVKAGFGIAICDEANTLLYNMK---KSLNGDDVIN 121

Query: 178 PVVAELMALIEGLEAALVFPLRRVSFFCDDRALYRYITGRLRPKLKEVERLVDQVGLLRG 237
           P   E+ ALI  L  ++   LR V   C D  +++ +TGR +P+ + +  LV+QV  LRG
Sbjct: 122 PEEVEIKALICVLNVSIQMELRNVMICCGDYQIFQILTGRGKPQ-QNIVHLVEQVQHLRG 181

Query: 238 YFSYCEPFLVERNDVKYAFRLANCYPAIETEDNRKFVENCKICYEDRELDQMFTIDDCLH 297
             S  E  LV R DV           AIE        E C IC E+ + D+MF  ++C H
Sbjct: 182 KLSSTEVVLVPRADV--------IILAIEAIGG----ETCCICRENTDADRMFFTENCFH 241

Query: 298 RYCFSCTRKHVEVKFLGGSVAKCPHEGCESVVKVESCDKLLPPNVIEIIQQRLKESSIPF 357
           R CFSC  +HV+   L G    C H  C S +  ESC K+L PN+IE  +++++E  +P 
Sbjct: 242 RQCFSCVNRHVQRMLLCGISPTCLHFPCNSELTFESCSKVLTPNLIEFWKRKIEEDLVPA 301

Query: 358 SDKVYCPQPRCSALMSKTEVLEYTKDIHENAEHSGTRKCVKCHQLFCIKCKSSWHVNMTC 417
           +DK+YCP  RCS LMSKT +   T       + S  R C+KC +LFCI CK   H  ++C
Sbjct: 302 ADKIYCPYRRCSMLMSKTALSRET-------DQSNVRACIKCCRLFCIDCKVPSHAGLSC 361

Query: 418 EAYKKSIHNTQTEDAKLKILAREKLWRPCARCSHLVELSEGCYHIICRCGHEFCYSCGAE 477
             YKK ++     D KLK LA +K WR C +CS+LVEL EGC HI CRCG EFCY CG E
Sbjct: 362 VDYKK-LNPDPLYDVKLKSLANKKKWRQCVQCSNLVELFEGCNHITCRCGFEFCYVCGKE 399

Query: 478 WKNKQRTCSCPIWDEENIINDE 495
           W   QR C  P  D+++  +D+
Sbjct: 422 W--NQRGCLSPGCDDDDDDDDD 399

The following BLAST results are available for this feature:

BLAST of CSPI06G16230 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
F4KGU4	2.7e-14	25.74	ATP-dependent RNA helicase DEAH12, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
P0CE10	3.5e-14	26.73	ATP-dependent RNA helicase DEAH11, chloroplastic OS=Arabidopsis thaliana OX=3702...	[more]
Q22431	5.9e-14	24.90	Potential E3 ubiquitin-protein ligase ariadne-2 OS=Caenorhabditis elegans OX=623...	[more]
P50876	3.9e-13	23.30	E3 ubiquitin-protein ligase RNF144A OS=Homo sapiens OX=9606 GN=RNF144A PE=1 SV=2	[more]
Q5RFV4	5.6e-12	22.79	Probable E3 ubiquitin-protein ligase RNF144A-A OS=Danio rerio OX=7955 GN=rnf144a...	[more]

BLAST of CSPI06G16230 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KC52	3.7e-293	98.59	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G290810 PE=3 SV=1	[more]
A0A5A7T1R8	3.2e-273	91.92	E3 ubiquitin-protein ligase dbl4-like OS=Cucumis melo var. makuwa OX=1194695 GN=...	[more]
A0A1S3CKS8	3.2e-273	91.92	E3 ubiquitin-protein ligase dbl4-like OS=Cucumis melo OX=3656 GN=LOC103501923 PE...	[more]
A0A6J1CFU0	5.1e-178	64.09	uncharacterized protein LOC111011041 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1L2U7	2.5e-172	61.83	probable E3 ubiquitin-protein ligase ARI9 OS=Cucurbita maxima OX=3661 GN=LOC1114...	[more]

BLAST of CSPI06G16230 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149564.1	7.6e-293	98.59	ATP-dependent RNA helicase DEAH12, chloroplastic [Cucumis sativus] >KGN47300.1 h...	[more]
XP_008463910.1	6.7e-273	91.92	PREDICTED: E3 ubiquitin-protein ligase dbl4-like [Cucumis melo] >KAA0035309.1 E3...	[more]
XP_038902119.1	1.1e-211	77.36	probable E3 ubiquitin-protein ligase ARI9 isoform X1 [Benincasa hispida]	[more]
XP_022140346.1	1.1e-177	64.09	uncharacterized protein LOC111011041 [Momordica charantia]	[more]
XP_023532221.1	4.6e-173	62.40	ATP-dependent RNA helicase DEAH12, chloroplastic-like [Cucurbita pepo subsp. pep...	[more]

BLAST of CSPI06G16230 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G60250.1	2.2e-96	44.27	zinc finger (C3HC4-type RING finger) family protein	[more]
AT2G25370.1	5.1e-77	40.72	RING/U-box superfamily protein	[more]
AT2G25360.1	9.6e-76	45.39	RING/U-box superfamily protein	[more]
AT5G37560.1	4.9e-72	38.69	RING/U-box superfamily protein	[more]
AT2G21420.1	6.0e-70	37.10	IBR domain containing protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 272..315 e-value: 0.13 score: 19.0 coord: 441..485 e-value: 3.7 score: 6.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 441..484 score: 9.317383
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 272..316 score: 9.391148
IPR002867	IBR domain	SMART	SM00647	ibrneu5	coord: 339..412 e-value: 9.2E-16 score: 68.4 coord: 422..482 e-value: 0.012 score: 23.1
IPR002867	IBR domain	PFAM	PF01485	IBR	coord: 429..480 e-value: 1.3E-6 score: 28.5 coord: 341..412 e-value: 6.0E-12 score: 45.6
IPR018957	Zinc finger, C3HC4 RING-type	PFAM	PF00097	zf-C3HC4	coord: 272..316 e-value: 2.0E-4 score: 21.2
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 269..353 e-value: 6.1E-15 score: 56.9
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 133..259 e-value: 1.3E-5 score: 27.2
IPR002156	Ribonuclease H domain	PFAM	PF13456	RVT_3	coord: 147..255 e-value: 4.1E-12 score: 46.0
None	No IPR available	GENE3D	1.20.120.1750		coord: 409..494 e-value: 2.2E-16 score: 62.5
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 53..71
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 32..71
None	No IPR available	PANTHER	PTHR11685:SF252	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 122..490
None	No IPR available	PANTHER	PTHR11685:SF252	RBR-TYPE E3 UBIQUITIN TRANSFERASE	coord: 4..124
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 426..490
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 270..352
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 4..124
IPR031127	E3 ubiquitin ligase RBR family	PANTHER	PTHR11685	RBR FAMILY RING FINGER AND IBR DOMAIN-CONTAINING	coord: 122..490
IPR044066	TRIAD supradomain	PROSITE	PS51873	TRIAD	coord: 268..486 score: 24.210543

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G16230.1	CSPI06G16230.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0032436	positive regulation of proteasomal ubiquitin-dependent protein catabolic process
biological_process	GO:0000209	protein polyubiquitination
biological_process	GO:0090502	RNA phosphodiester bond hydrolysis, endonucleolytic
biological_process	GO:0016567	protein ubiquitination
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0000151	ubiquitin ligase complex
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0004523	RNA-DNA hybrid ribonuclease activity
molecular_function	GO:0031624	ubiquitin conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity
molecular_function	GO:0004842	ubiquitin-protein transferase activity