CSPI06G16210 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G16210
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	LOB domain-containing protein
Location	Chr6: 14633962 .. 14635649 (+)
RNA-Seq Expression	CSPI06G16210
Synteny	CSPI06G16210

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATTTCATGTTCATACCCTTTTCTCTTTTCTCTATTTATATCTCTGTTTTTCCATTTCCAAACGAAACCAAACCAAACCCTCCATTTCTTCTCCTTCTTCTTCTCCGTTTCTTTACTCCGATCATCCCAAATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGTCTTTTTCATCCGCCTTTTTAATTTCTCTCATGTTTTGGTCTCTGTTTTATTTTAACTCTCCAATTTCTAACTGTTCGGTTATTTTGCAAGATTGAATCAGTGAATTAGGGCTGAAAATGTGCATTCATTTGTTAGTTGTTACTCACTAACGACCTTGTTGCTCTTCCATTTTTGTTTTACACATTAAAAAACTATGCAGTGAGATTTGGAGCATGATGAAATTAATTCTTAAGATTTTGTTTGATCCTACCCACTTAACCTACTAAATATCTCCATTTGGAATTCTATGCTGAACTTTAAATTATTCACATTACTTGCAAAACAAAATAACTTTTTAAACTTCCATAATTTGAAAAGTAGCCAAACCAATATGTAATGTAATTATATCAATACTTTAACACTCCTATGCTCCAGTAACTTTTTACACTCATATATGTTTATAATGACTATGACAGTACCATATGTACCAACCAAAAAACTTAGGTTGATGGAGTTCTTTCCAGCAAATTTGATTATATTTGTACTTTTAACTTTCGTATGCGTCCCATTATGACTATGCCATTACCATTACTTCATATTCTCTTGTCAACCCAAAAGCTTAAAACTGATGGATTCTTTCAAGTAAACTTAATTAATACCGATGCTTCATTTCCCATTTTCCCTTGTTTGAATAGTATAATTCACAATACAAGATCCCTATGGGACAACCCACTTGTCATGAACTGAAATTCTTTATTGGGGGATTGATTAAACAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTCTATTTAGTTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCAATGAAGTTTCTCCAAACTCTTTTGAGAGCCAAATTTGAGGTTATGGGTAGGAGAAACTTTGCGGACAGAATACAACACAAATTTTAGGCGATTTGGTTTGATTCGTTTTCATTTTTATGTTTTCAAAATCAAAAAATATAAAAG

mRNA sequence

ATTTCATGTTCATACCCTTTTCTCTTTTCTCTATTTATATCTCTGTTTTTCCATTTCCAAACGAAACCAAACCAAACCCTCCATTTCTTCTCCTTCTTCTTCTCCGTTTCTTTACTCCGATCATCCCAAATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGAATTCTATTTAGTTTTTTTAGGTTTGTGGATGTAAGGTGTTTGATAAAATGCTCCAATGAAGTTTCTCCAAACTCTTTTGAGAGCCAAATTTGAGGTTATGGGTAGGAGAAACTTTGCGGACAGAATACAACACAAATTTTAGGCGATTTGGTTTGATTCGTTTTCATTTTTATGTTTTCAAAATCAAAAAATATAAAAG

Coding sequence (CDS)

ATGGAAGGAAGTGACACAATCACAGTCACCACCGTTTCTTCAACTCCACTTTCTCAATCTCCTTCTTCTTCTTCTTCTCCGGCACCACCCCCGCCCGTTATTCTCAGTCCATGTGCGGCCTGCAAGATTTTGCGACGGCGATGTGCCGAGCGATGTGTATTGGCTCCCTATTTCCCTCCCTCTGAACCGGCGAAGTTTGCCATCGCTCATCGAGTTTTTGGCGCCAGTAATATCATCAAATTCCTGCAGGAATTGCCTGAATCTCAAAGGGCAGATGCAGTGAGCAGCTTGGTTTATGAAGCAAGTGCAAGGGTTAGAGACCCTGTTTATGGGTCAGCAGGGGCCATTTGCCAACTCCAAAAGCAAGTCAATGAGCTTCAAGCCCAACTAGCCAAAGCTCAGGCAGAGGTTGTCAACATGCAATGCCAACAAGCCAATCTTGTGGCCTTTGTTTGCAGGGAATTGGCTCAATCTCATCAATCTTTTGATGAATTCAATGGCAGCCCACAATCACATAATGGATTATTACAGAGCATACATCCTCCAAGTTACTTTGATGATAGCAATAACGTAAACTCATTGTGGGAACCTCTTTGGACATGA

Protein sequence

MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNSLWEPLWT*

Homology

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BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot
Match: Q9SK08 (LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 SV=2)

HSP 1 Score: 211.5 bits (537), Expect = 9.0e-54
Identity = 124/225 (55.11%), Postives = 153/225 (68.00%), Query Frame = 0


Query: 4   SDTITVTTVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLA 63
           +  +   T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLA
Sbjct: 15  ASAVAKVTETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLA 74

Query: 64  PYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGA 123
           PYFPP++PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGA
Sbjct: 75  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGA 134

Query: 124 ICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF---- 183
           I  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF    
Sbjct: 135 IYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSF 194

Query: 184 ---DEFNGSPQSHNGLLQSIHPPSYFDDSNNVN----SLWEPLWT 201
              DEF  SP   +  L       + +D+NN N    S W+PLWT
Sbjct: 195 ESGDEFISSPDEESNDL------GFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot
Match: Q9LQR0 (LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=1)

HSP 1 Score: 211.1 bits (536), Expect = 1.2e-53
Identity = 120/193 (62.18%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAH 70
           +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPP++PAKF IAH
Sbjct: 8   SVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAH 67

Query: 71  RVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQL 130
           RVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV+ELQAQL
Sbjct: 68  RVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQL 127

Query: 131 AKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNN 190
           AKAQ E+VNMQ Q++NL+  +     Q  Q  D  N S +S++          + +D +N
Sbjct: 128 AKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQD--NMSFESND--------LGFLEDKSN 187

Query: 191 VNS---LWEPLWT 201
            NS    W+PLWT
Sbjct: 188 TNSSMLWWDPLWT 189

[Close]

BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot
Match: Q9SHE9 (LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=1)

HSP 1 Score: 157.1 bits (396), Expect = 2.0e-37
Identity = 87/162 (53.70%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVA--FVCR 155
           S+VYEA+ARVRDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+       +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 156 ELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNSLW 196
           +   S  S      SPQ + G+   +      D+++   S+W
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHM---DIVDEASLGESMW 170

[Close]

BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot
Match: Q8LBW3 (LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 SV=2)

HSP 1 Score: 155.2 bits (391), Expect = 7.7e-37
Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+ARVRDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNS 194
            QSH    E +   Q H  LL + +  +  + +NN N+
Sbjct: 127 LQSHHQVLELD---QDHKALLLNNNNINNCNTNNNNNN 153

[Close]

BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot
Match: Q8L5T5 (LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 1.7e-31
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

[Close]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL
Match: A0A0A0KCM5 (LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV=1)

HSP 1 Score: 391.0 bits (1003), Expect = 3.1e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 201
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL
Match: A0A5D3CSE3 (LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G00590 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++T+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 201
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL
Match: A0A1S3CKA7 (LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=3 SV=1)

HSP 1 Score: 375.6 bits (963), Expect = 1.3e-100
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++T+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 201
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL
Match: A0A6J1J8I0 (LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDSI--ITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPQSHNGLLQSI 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N    SH+GL  SI
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNA--DSHSGLFHSI 180

Query: 181 HPPSYFDDSNNVNSLWEPLWT 201
             PSYFDD+ NVN LWEPLWT
Sbjct: 181 SSPSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL
Match: A0A6J1FT49 (LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111448531 PE=3 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.5e-86
Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDSI--ITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPQSHNGLLQSI 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N    SH+GL  SI
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNA--DSHSGLFHSI 180

Query: 181 HPPSYFDDSNNVNSLWEPLWT 201
             PSYFDD+ NVN LWEPLWT
Sbjct: 181 SSPSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of CSPI06G16210 vs. NCBI nr
Match: XP_004149555.1 (LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical protein Csa_022951 [Cucumis sativus])

HSP 1 Score: 391.0 bits (1003), Expect = 6.4e-105
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ
Sbjct: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 201
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 200

[Close]

BLAST of CSPI06G16210 vs. NCBI nr
Match: XP_008463908.1 (PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa] >TYK14330.1 LOB domain-containing protein 1-like [Cucumis melo var. makuwa])

HSP 1 Score: 375.6 bits (963), Expect = 2.8e-100
Identity = 192/200 (96.00%), Postives = 198/200 (99.00%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD++T+TTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP
Sbjct: 1   MEGSDSLTITTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIH 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP  HNGLLQSI+
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSP--HNGLLQSIN 180

Query: 181 PPSYFDDSNNVNSLWEPLWT 201
           PPSYFDDSNNVNSLWEPLWT
Sbjct: 181 PPSYFDDSNNVNSLWEPLWT 198

[Close]

BLAST of CSPI06G16210 vs. NCBI nr
Match: XP_038902542.1 (LOB domain-containing protein 1 [Benincasa hispida])

HSP 1 Score: 341.3 bits (874), Expect = 5.8e-90
Identity = 185/201 (92.04%), Postives = 191/201 (95.02%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAP-PPPVILSPCAACKILRRRCAERCVLAPYFP 60
           MEGSD  +VTTVSSTPLSQSPSSSSS AP PPPV+LSPCAACKILRRRCAERCVLAPYFP
Sbjct: 1   MEGSD--SVTTVSSTPLSQSPSSSSSLAPSPPPVVLSPCAACKILRRRCAERCVLAPYFP 60

Query: 61  PSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQL 120
           P+EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQL
Sbjct: 61  PTEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQL 120

Query: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSI 180
           QKQVNELQAQLAKAQAEVVNMQCQQANLV+FVCRELAQSHQSFD+FNGSP  HNGL QSI
Sbjct: 121 QKQVNELQAQLAKAQAEVVNMQCQQANLVSFVCRELAQSHQSFDDFNGSP--HNGLFQSI 180

Query: 181 HPPSYFDDSNNVNSLWEPLWT 201
             PSYFDDS NVNSLWEPLWT
Sbjct: 181 -SPSYFDDS-NVNSLWEPLWT 195

[Close]

BLAST of CSPI06G16210 vs. NCBI nr
Match: XP_022943961.1 (LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB domain-containing protein 1 [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   T+SSTP SQSPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDSI--ITLSSTPPSQSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPQSHNGLLQSI 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N    SH+GL  SI
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNA--DSHSGLFHSI 180

Query: 181 HPPSYFDDSNNVNSLWEPLWT 201
             PSYFDD+ NVN LWEPLWT
Sbjct: 181 SSPSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of CSPI06G16210 vs. NCBI nr
Match: XP_023512010.1 (LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 326.6 bits (836), Expect = 1.5e-85
Identity = 176/201 (87.56%), Postives = 184/201 (91.54%), Query Frame = 0


Query: 1   MEGSDTITVTTVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPP 60
           MEGSD+I   T+SSTP S SPSSSSSPAPPPPV+LSPCAACKILRRRCAE CVLAPYFPP
Sbjct: 1   MEGSDSI--ITLSSTPPSPSPSSSSSPAPPPPVVLSPCAACKILRRRCAEGCVLAPYFPP 60

Query: 61  SEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQ 120
           +EPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASAR+RDPVYGSAGAICQLQ
Sbjct: 61  TEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARIRDPVYGSAGAICQLQ 120

Query: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ-SFDEFNGSPQSHNGLLQSI 180
           KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQ SFD+ N    SH+GL QSI
Sbjct: 121 KQVNELQAQLAKAQAEVVNMQCQQANLVAFVCRELAQSHQSSFDDLNA--DSHSGLFQSI 180

Query: 181 HPPSYFDDSNNVNSLWEPLWT 201
             PSYFDD+ NVN LWEPLWT
Sbjct: 181 SSPSYFDDT-NVNPLWEPLWT 196

[Close]

BLAST of CSPI06G16210 vs. TAIR 10
Match: AT2G28500.1 (LOB domain-containing protein 11 )

HSP 1 Score: 211.5 bits (537), Expect = 6.4e-55
Identity = 124/225 (55.11%), Postives = 153/225 (68.00%), Query Frame = 0


Query: 4   SDTITVTTVSSTPLSQSPSSSSSPAPP--------PPVILSPCAACKILRRRCAERCVLA 63
           +  +   T ++TP++ SPS +SSP PP        PPV+LSPCAACKILRRRCA++CVLA
Sbjct: 15  ASAVAKVTETTTPVN-SPSPTSSPPPPPSPQQPPQPPVVLSPCAACKILRRRCADKCVLA 74

Query: 64  PYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGA 123
           PYFPP++PAKF IAHRVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGA
Sbjct: 75  PYFPPTDPAKFTIAHRVFGASNIIKFLQELPESQRTDAVNSMVYEAGARMRDPVYGCAGA 134

Query: 124 ICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFV---------CRELAQSHQSF---- 183
           I  LQ+QV+ELQAQLAK Q E+V MQ Q+++L+  +          +E  Q   SF    
Sbjct: 135 IYHLQRQVSELQAQLAKTQVELVGMQLQRSSLLELIYNMEQTKLSVQEQGQQKMSFESSF 194

Query: 184 ---DEFNGSPQSHNGLLQSIHPPSYFDDSNNVN----SLWEPLWT 201
              DEF  SP   +  L       + +D+NN N    S W+PLWT
Sbjct: 195 ESGDEFISSPDEESNDL------GFLEDNNNNNNSSMSWWDPLWT 232

[Close]

BLAST of CSPI06G16210 vs. TAIR 10
Match: AT1G07900.1 (LOB domain-containing protein 1 )

HSP 1 Score: 211.1 bits (536), Expect = 8.4e-55
Identity = 120/193 (62.18%), Postives = 145/193 (75.13%), Query Frame = 0


Query: 11  TVSSTPLSQSPSSSSSPAPPPPVILSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAH 70
           +V++TP+  S SSS  P+  P V+LSPCAACKILRRRCAERCVLAPYFPP++PAKF IAH
Sbjct: 8   SVATTPIISS-SSSPPPSLSPRVVLSPCAACKILRRRCAERCVLAPYFPPTDPAKFTIAH 67

Query: 71  RVFGASNIIKFLQELPESQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQL 130
           RVFGASNIIKFLQELPESQR DAV+S+VYEA AR+RDPVYG AGAI  LQ+QV+ELQAQL
Sbjct: 68  RVFGASNIIKFLQELPESQRTDAVNSMVYEAEARIRDPVYGCAGAIYHLQRQVSELQAQL 127

Query: 131 AKAQAEVVNMQCQQANLVAFVCRELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNN 190
           AKAQ E+VNMQ Q++NL+  +     Q  Q  D  N S +S++          + +D +N
Sbjct: 128 AKAQVEMVNMQFQRSNLLELIYNMDQQQKQEQD--NMSFESND--------LGFLEDKSN 187

Query: 191 VNS---LWEPLWT 201
            NS    W+PLWT
Sbjct: 188 TNSSMLWWDPLWT 189

[Close]

BLAST of CSPI06G16210 vs. TAIR 10
Match: AT1G31320.1 (LOB domain-containing protein 4 )

HSP 1 Score: 157.1 bits (396), Expect = 1.4e-38
Identity = 87/162 (53.70%), Postives = 110/162 (67.90%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCAACK+LRRRCA+ CV +PYFP  EP KFA  HRVFGASN+ K LQELP  QR DAVS
Sbjct: 12  SPCAACKLLRRRCAQDCVFSPYFPADEPQKFANVHRVFGASNVNKMLQELPIHQRGDAVS 71

Query: 96  SLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVA--FVCR 155
           S+VYEA+ARVRDPVYG  GAI  LQ+Q++ LQAQLA AQAEVV+++ +Q+       +C 
Sbjct: 72  SMVYEANARVRDPVYGCVGAISSLQQQIDVLQAQLALAQAEVVHLRVRQSTNFPGHGLCP 131

Query: 156 ELAQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNSLW 196
           +   S  S      SPQ + G+   +      D+++   S+W
Sbjct: 132 DSPSSSGSPSSKQVSPQDNKGMFSHM---DIVDEASLGESMW 170

[Close]

BLAST of CSPI06G16210 vs. TAIR 10
Match: AT2G30130.1 (Lateral organ boundaries (LOB) domain family protein )

HSP 1 Score: 155.2 bits (391), Expect = 5.5e-38
Identity = 86/158 (54.43%), Postives = 108/158 (68.35%), Query Frame = 0


Query: 36  SPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPESQRADAVS 95
           SPCA+CK+LRRRCA+ C+ APYFPP +P KFAI H+VFGASN+ K LQELP  QRADAV+
Sbjct: 7   SPCASCKLLRRRCAKDCIFAPYFPPDDPHKFAIVHKVFGASNVSKMLQELPVHQRADAVN 66

Query: 96  SLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQANLVAFVCREL 155
           SLV+EA+ARVRDPVYG  GAI  LQ QV++LQ QLA AQAE++ +Q Q            
Sbjct: 67  SLVFEANARVRDPVYGCVGAISYLQNQVSQLQMQLAVAQAEILCIQMQN--------EPT 126

Query: 156 AQSHQSFDEFNGSPQSHNGLLQSIHPPSYFDDSNNVNS 194
            QSH    E +   Q H  LL + +  +  + +NN N+
Sbjct: 127 LQSHHQVLELD---QDHKALLLNNNNINNCNTNNNNNN 153

[Close]

BLAST of CSPI06G16210 vs. TAIR 10
Match: AT2G40470.1 (LOB domain-containing protein 15 )

HSP 1 Score: 137.5 bits (345), Expect = 1.2e-32
Identity = 68/118 (57.63%), Postives = 89/118 (75.42%), Query Frame = 0


Query: 30  PPPVI--LSPCAACKILRRRCAERCVLAPYFPPSEPAKFAIAHRVFGASNIIKFLQELPE 89
           PP  +  ++PCAACK+LRRRCA+ C  +PYF P EP KFA  H+VFGASN+ K L E+PE
Sbjct: 36  PPGTLNTITPCAACKLLRRRCAQECPFSPYFSPHEPHKFASVHKVFGASNVSKMLMEVPE 95

Query: 90  SQRADAVSSLVYEASARVRDPVYGSAGAICQLQKQVNELQAQLAKAQAEVVNMQCQQA 146
           SQRADA +SLVYEA+ R+RDPVYG  GAI  LQ+QV  LQA+L   ++E++  + ++A
Sbjct: 96  SQRADAANSLVYEANVRLRDPVYGCMGAISALQQQVQALQAELTAVRSEILKYKQREA 153

The following BLAST results are available for this feature:

BLAST of CSPI06G16210 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SK08	9.0e-54	55.11	LOB domain-containing protein 11 OS=Arabidopsis thaliana OX=3702 GN=LBD11 PE=2 S...	[more]
Q9LQR0	1.2e-53	62.18	LOB domain-containing protein 1 OS=Arabidopsis thaliana OX=3702 GN=LBD1 PE=2 SV=...	[more]
Q9SHE9	2.0e-37	53.70	LOB domain-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=LBD4 PE=1 SV=...	[more]
Q8LBW3	7.7e-37	54.43	LOB domain-containing protein 12 OS=Arabidopsis thaliana OX=3702 GN=LBD12 PE=1 S...	[more]
Q8L5T5	1.7e-31	57.63	LOB domain-containing protein 15 OS=Arabidopsis thaliana OX=3702 GN=LBD15 PE=1 S...	[more]

BLAST of CSPI06G16210 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KCM5	3.1e-105	100.00	LOB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G290790 PE=3 SV...	[more]
A0A5D3CSE3	1.3e-100	96.00	LOB domain-containing protein 1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A1S3CKA7	1.3e-100	96.00	LOB domain-containing protein 1-like OS=Cucumis melo OX=3656 GN=LOC103501920 PE=...	[more]
A0A6J1J8I0	5.5e-86	87.56	LOB domain-containing protein 1 OS=Cucurbita maxima OX=3661 GN=LOC111483579 PE=3...	[more]
A0A6J1FT49	5.5e-86	87.56	LOB domain-containing protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC1114485...	[more]

BLAST of CSPI06G16210 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004149555.1	6.4e-105	100.00	LOB domain-containing protein 1 [Cucumis sativus] >KGN47298.1 hypothetical prote...	[more]
XP_008463908.1	2.8e-100	96.00	PREDICTED: LOB domain-containing protein 1-like [Cucumis melo] >KAA0035306.1 LOB...	[more]
XP_038902542.1	5.8e-90	92.04	LOB domain-containing protein 1 [Benincasa hispida]	[more]
XP_022943961.1	1.1e-85	87.56	LOB domain-containing protein 1-like [Cucurbita moschata] >XP_022985541.1 LOB do...	[more]
XP_023512010.1	1.5e-85	87.56	LOB domain-containing protein 1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G16210 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G28500.1	6.4e-55	55.11	LOB domain-containing protein 11	[more]
AT1G07900.1	8.4e-55	62.18	LOB domain-containing protein 1	[more]
AT1G31320.1	1.4e-38	53.70	LOB domain-containing protein 4	[more]
AT2G30130.1	5.5e-38	54.43	Lateral organ boundaries (LOB) domain family protein	[more]
AT2G40470.1	1.2e-32	57.63	LOB domain-containing protein 15	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 116..143
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..22
None	No IPR available	PANTHER	PTHR31301	LOB DOMAIN-CONTAINING PROTEIN 4-RELATED	coord: 12..197
None	No IPR available	PANTHER	PTHR31301:SF141	LOB DOMAIN-CONTAINING PROTEIN 1-LIKE	coord: 12..197
IPR004883	Lateral organ boundaries, LOB	PFAM	PF03195	LOB	coord: 37..134 e-value: 4.4E-41 score: 139.5
IPR004883	Lateral organ boundaries, LOB	PROSITE	PS50891	LOB	coord: 36..137 score: 26.209249

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G16210.1	CSPI06G16210.1	mRNA