CSPI06G15950 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G15950
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 14339341 .. 14339648 (+)
RNA-Seq ExpressionCSPI06G15950
SyntenyCSPI06G15950
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
TAATGACTCGTGGCAAAGTAGGAACGACAGCGAACAACCCAATCGAATGGCGTAGGTTTGCTACCTGCGGCAGGACGAAGAAGGAACTCGACGCGCAGAAAGTTGGATCTGGGGTCTTTAGTTCGGTTCACGGCAGCTTCACGGTAGCGAATGAAAACCTGATTGCGCGGACGTCAAAGGTGTTATTCGCGGAAGAAGTCGAGCAGCAGCTTTGCGAAGAGACGACGTGCGACGGAGAGACCGTATACAGACGGCCGGAGAGTCGCGCGGCAGTGCAGACAACGGAAGAGCGGCGGCGGCTGGGCTGA

mRNA sequence

TAATGACTCGTGGCAAAGTAGGAACGACAGCGAACAACCCAATCGAATGGCGTAGGTTTGCTACCTGCGGCAGGACGAAGAAGGAACTCGACGCGCAGAAAGTTGGATCTGGGGTCTTTAGTTCGGTTCACGGCAGCTTCACGGTAGCGAATGAAAACCTGATTGCGCGGACGTCAAAGGTGTTATTCGCGGAAGAAGTCGAGCAGCAGCTTTGCGAAGAGACGACGTGCGACGGAGAGACCGTATACAGACGGCCGGAGAGTCGCGCGGCAGTGCAGACAACGGAAGAGCGGCGGCGGCTGGGCTGA

Coding sequence (CDS)

ATGACTCGTGGCAAAGTAGGAACGACAGCGAACAACCCAATCGAATGGCGTAGGTTTGCTACCTGCGGCAGGACGAAGAAGGAACTCGACGCGCAGAAAGTTGGATCTGGGGTCTTTAGTTCGGTTCACGGCAGCTTCACGGTAGCGAATGAAAACCTGATTGCGCGGACGTCAAAGGTGTTATTCGCGGAAGAAGTCGAGCAGCAGCTTTGCGAAGAGACGACGTGCGACGGAGAGACCGTATACAGACGGCCGGAGAGTCGCGCGGCAGTGCAGACAACGGAAGAGCGGCGGCGGCTGGGCTGA

Protein sequence

MTRGKVGTTANNPIEWRRFATCGRTKKELDAQKVGSGVFSSVHGSFTVANENLIARTSKVLFAEEVEQQLCEETTCDGETVYRRPESRAAVQTTEERRRLG*
Homology
[Close]
BLAST of CSPI06G15950 vs. ExPASy TrEMBL
Match: A0A0A0K6X6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G109550 PE=4 SV=1)

HSP 1 Score: 144.4 bits (363), Expect = 2.5e-31
Identity = 70/82 (85.37%), Postives = 73/82 (89.02%), Query Frame = 0 

Query: 1  MTRGKVGTTANNPIEWRRFATCGRTKKELDAQKVGSGVFSSVHGSFTVANENLIARTSKV 60
          MTRGK GT  NNPIEW  FATCGRTKK+LDAQKVGSGVFSSVHGSFTVANENL ARTSKV
Sbjct: 1  MTRGKAGTIVNNPIEWCGFATCGRTKKKLDAQKVGSGVFSSVHGSFTVANENLTARTSKV 60

Query: 61 LFAEEVEQQLCEETTCDGETVY 83
          L AEE+EQQLCE+TTCD ET Y
Sbjct: 61 LLAEEIEQQLCEQTTCDRETEY 82

[Close]
BLAST of CSPI06G15950 vs. NCBI nr
Match: KAE8647022.1 (hypothetical protein Csa_019099 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-15
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 1   MTRGKVGTTANNPIEWRRFATCGRTKKELDAQKVGSGVFSSVHGS 46
           MTRGK GTTANNPIEWR FATCGRTKKELDAQKVGSGVFSSVHGS
Sbjct: 151 MTRGKAGTTANNPIEWRGFATCGRTKKELDAQKVGSGVFSSVHGS 195

[Close]
BLAST of CSPI06G15950 vs. NCBI nr
Match: KAE8647023.1 (hypothetical protein Csa_019095 [Cucumis sativus])

HSP 1 Score: 92.0 bits (227), Expect = 3.1e-15
Identity = 43/45 (95.56%), Postives = 43/45 (95.56%), Query Frame = 0 

Query: 1  MTRGKVGTTANNPIEWRRFATCGRTKKELDAQKVGSGVFSSVHGS 46
          MTRGK GTTANNPIEWR FATCGRTKKELDAQKVGSGVFSSVHGS
Sbjct: 1  MTRGKAGTTANNPIEWRGFATCGRTKKELDAQKVGSGVFSSVHGS 45

The following BLAST results are available for this feature:
BLAST of CSPI06G15950 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G15950 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0K6X62.5e-3185.37Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G109550 PE=4 SV=1[more]
BLAST of CSPI06G15950 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8647022.13.1e-1595.56hypothetical protein Csa_019099 [Cucumis sativus][more]
KAE8647023.13.1e-1595.56hypothetical protein Csa_019095 [Cucumis sativus][more]
BLAST of CSPI06G15950 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G15950.1CSPI06G15950.1mRNA