CSPI06G14700 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGATTATTTGCTCATCTAAAACACGATCTAACGCATGTTTTTCAAGACAGGTCAGCAATCTGTGGCCTTAGCGCATCAGCGAATTAGAACAGATCGAACGCGAGTATAAATATATTAGTCCAACCCCATTCTTCGAGAATTATTCTTTATTTCGCTCTTTGTTTATCGAATCCAATTCGATCCTTCATTTTTCACCGCTTTTCTTTCTTCCGAACAAATTCCGATGGCACCGAAGGCCGATAAGAAGCCCGCCGAGAAGAAGCCGGCCTCCGAAAAACCGGCCGAGGAGAAGAAAACCGTTGCAGAGAAAGCCCCGGCGGAGAAAAAGCCCAAGGCCGGTAAGAAGCTTCCAAAGGAAGGCGGTGCTGCTGCCGGAGACAAGAAGAAGAAGAGGACGAAGAAGAGTGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATTTCCAGCAAGGCCATGGGAATCATGAATAGTTTCATCAACGATATCTTTGAGAAACTCGCCCAAGAGTCATCTAAATTGGCTCGCTACAACAAGAAGCCCACCATCACTTCCAGGGAGATCCAAACGGCCGTTAGACTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCAGTATCTGAAGGCACCAAGGCGGTGACTAAGTTCACAAGTTCTTAAATCTTAATTTATTGTGGATTGAAATCCTATAGGTGGTTTTAGATGAAATAAATTAGGGTTAGTATCTCTATTTTTAACTATTACGATGTATTTGTGTCTTTAATATCTTTTGGATTTGTGAATTTCTTTTCACATATACAGATGCTTTTGTAAATGCTTCTCTTCATCTGGTGGTAATTGAAGTGATTTTGTTTATCATGTACTTTTTTGTCTCTGATCTTTGAATCATTATTGGGACTCTGTTTGTCAAGACGATGAACTAGGTTTTTTGGTTATTTTGGAATTTAATACTTTCTGTTAAGGAACAATTTCCATTTGAATTTTGGATAATCACATCGGTATTTAATCTAATCATTTTGGGACTATT TGATTATTTGCTCATCTAAAACACGATCTAACGCATGTTTTTCAAGACAGGTCAGCAATCTGTGGCCTTAGCGCATCAGCGAATTAGAACAGATCGAACGCGAGTATAAATATATTAGTCCAACCCCATTCTTCGAGAATTATTCTTTATTTCGCTCTTTGTTTATCGAATCCAATTCGATCCTTCATTTTTCACCGCTTTTCTTTCTTCCGAACAAATTCCGATGGCACCGAAGGCCGATAAGAAGCCCGCCGAGAAGAAGCCGGCCTCCGAAAAACCGGCCGAGGAGAAGAAAACCGTTGCAGAGAAAGCCCCGGCGGAGAAAAAGCCCAAGGCCGGTAAGAAGCTTCCAAAGGAAGGCGGTGCTGCTGCCGGAGACAAGAAGAAGAAGAGGACGAAGAAGAGTGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATTTCCAGCAAGGCCATGGGAATCATGAATAGTTTCATCAACGATATCTTTGAGAAACTCGCCCAAGAGTCATCTAAATTGGCTCGCTACAACAAGAAGCCCACCATCACTTCCAGGGAGATCCAAACGGCCGTTAGACTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCAGTATCTGAAGGCACCAAGGCGGTGACTAAGTTCACAAGTTCTTAAATCTTAATTTATTGTGGATTGAAATCCTATAGGTGGTTTTAGATGAAATAAATTAGGGTTAGTATCTCTATTTTTAACTATTACGATGTATTTGTGTCTTTAATATCTTTTGGATTTGTGAATTTCTTTTCACATATACAGATGCTTTTGTAAATGCTTCTCTTCATCTGGTGGTAATTGAAGTGATTTTGTTTATCATGTACTTTTTTGTCTCTGATCTTTGAATCATTATTGGGACTCTGTTTGTCAAGACGATGAACTAGGTTTTTTGGTTATTTTGGAATTTAATACTTTCTGTTAAGGAACAATTTCCATTTGAATTTTGGATAATCACATCGGTATTTAATCTAATCATTTTGGGACTATT ATGGCACCGAAGGCCGATAAGAAGCCCGCCGAGAAGAAGCCGGCCTCCGAAAAACCGGCCGAGGAGAAGAAAACCGTTGCAGAGAAAGCCCCGGCGGAGAAAAAGCCCAAGGCCGGTAAGAAGCTTCCAAAGGAAGGCGGTGCTGCTGCCGGAGACAAGAAGAAGAAGAGGACGAAGAAGAGTGTAGAGACGTACAAGATCTACATCTTCAAGGTGCTGAAGCAAGTTCATCCAGACATCGGAATTTCCAGCAAGGCCATGGGAATCATGAATAGTTTCATCAACGATATCTTTGAGAAACTCGCCCAAGAGTCATCTAAATTGGCTCGCTACAACAAGAAGCCCACCATCACTTCCAGGGAGATCCAAACGGCCGTTAGACTTGTTCTTCCCGGTGAGTTGGCCAAGCACGCAGTATCTGAAGGCACCAAGGCGGTGACTAAGTTCACAAGTTCTTAA MAPKADKKPAEKKPASEKPAEEKKTVAEKAPAEKKPKAGKKLPKEGGAAAGDKKKKRTKKSVETYKIYIFKVLKQVHPDIGISSKAMGIMNSFINDIFEKLAQESSKLARYNKKPTITSREIQTAVRLVLPGELAKHAVSEGTKAVTKFTSS* Homology
BLAST of CSPI06G14700 vs. ExPASy Swiss-Prot
Match: O22582 (Histone H2B OS=Gossypium hirsutum OX=3635 GN=HIS2B PE=2 SV=3) HSP 1 Score: 252.7 bits (644), Expect = 2.7e-66 Identity = 142/152 (93.42%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy Swiss-Prot
Match: Q1S9I9 (Probable histone H2B.1 OS=Medicago truncatula OX=3880 PE=3 SV=3) HSP 1 Score: 250.4 bits (638), Expect = 1.3e-65 Identity = 140/152 (92.11%), Postives = 145/152 (95.39%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy Swiss-Prot
Match: Q1SWQ1 (Probable histone H2B.2 OS=Medicago truncatula OX=3880 PE=3 SV=3) HSP 1 Score: 246.5 bits (628), Expect = 1.9e-64 Identity = 138/152 (90.79%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy Swiss-Prot
Match: P40283 (Histone H2B.11 OS=Arabidopsis thaliana OX=3702 GN=At5g59910 PE=1 SV=5) HSP 1 Score: 246.1 bits (627), Expect = 2.5e-64 Identity = 141/152 (92.76%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy Swiss-Prot
Match: O23629 (Histone H2B.6 OS=Arabidopsis thaliana OX=3702 GN=H2B PE=1 SV=3) HSP 1 Score: 243.0 bits (619), Expect = 2.1e-63 Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy TrEMBL
Match: A0A0A0KHC9 (Histone H2B OS=Cucumis sativus OX=3659 GN=Csa_6G193620 PE=3 SV=1) HSP 1 Score: 274.6 bits (701), Expect = 2.4e-70 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy TrEMBL
Match: A0A5D3DK48 (Histone H2B OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold250G00500 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy TrEMBL
Match: A0A1S3BIZ0 (Histone H2B OS=Cucumis melo OX=3656 GN=LOC103490588 PE=3 SV=1) HSP 1 Score: 271.2 bits (692), Expect = 2.7e-69 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy TrEMBL
Match: A0A6P3ZH56 (Histone H2B OS=Ziziphus jujuba OX=326968 GN=LOC107411057 PE=3 SV=1) HSP 1 Score: 269.2 bits (687), Expect = 1.0e-68 Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. ExPASy TrEMBL
Match: A0A2P5BRL4 (Histone H2B OS=Trema orientale OX=63057 GN=TorRG33x02_311120 PE=3 SV=1) HSP 1 Score: 265.8 bits (678), Expect = 1.1e-67 Identity = 146/152 (96.05%), Postives = 149/152 (98.03%), Query Frame = 0
BLAST of CSPI06G14700 vs. NCBI nr
Match: XP_004143093.1 (histone H2B [Cucumis sativus] >KGN47176.1 hypothetical protein Csa_020799 [Cucumis sativus]) HSP 1 Score: 274.6 bits (701), Expect = 5.1e-70 Identity = 152/152 (100.00%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CSPI06G14700 vs. NCBI nr
Match: XP_038900415.1 (histone H2B [Benincasa hispida]) HSP 1 Score: 272.3 bits (695), Expect = 2.5e-69 Identity = 150/152 (98.68%), Postives = 152/152 (100.00%), Query Frame = 0
BLAST of CSPI06G14700 vs. NCBI nr
Match: XP_008448382.1 (PREDICTED: histone H2B [Cucumis melo] >KAA0061943.1 histone H2B [Cucumis melo var. makuwa] >TYK23986.1 histone H2B [Cucumis melo var. makuwa]) HSP 1 Score: 271.2 bits (692), Expect = 5.6e-69 Identity = 150/152 (98.68%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. NCBI nr
Match: XP_028052986.1 (histone H2B-like [Camellia sinensis]) HSP 1 Score: 270.4 bits (690), Expect = 9.5e-69 Identity = 149/152 (98.03%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. NCBI nr
Match: XP_015874056.1 (histone H2B-like [Ziziphus jujuba]) HSP 1 Score: 269.2 bits (687), Expect = 2.1e-68 Identity = 148/152 (97.37%), Postives = 151/152 (99.34%), Query Frame = 0
BLAST of CSPI06G14700 vs. TAIR 10
Match: AT5G59910.1 (Histone superfamily protein ) HSP 1 Score: 246.1 bits (627), Expect = 1.8e-65 Identity = 141/152 (92.76%), Postives = 144/152 (94.74%), Query Frame = 0
BLAST of CSPI06G14700 vs. TAIR 10
Match: AT3G45980.1 (Histone superfamily protein ) HSP 1 Score: 243.0 bits (619), Expect = 1.5e-64 Identity = 139/152 (91.45%), Postives = 143/152 (94.08%), Query Frame = 0
BLAST of CSPI06G14700 vs. TAIR 10
Match: AT2G28720.1 (Histone superfamily protein ) HSP 1 Score: 238.0 bits (606), Expect = 4.9e-63 Identity = 136/152 (89.47%), Postives = 140/152 (92.11%), Query Frame = 0
BLAST of CSPI06G14700 vs. TAIR 10
Match: AT1G07790.1 (Histone superfamily protein ) HSP 1 Score: 235.0 bits (598), Expect = 4.1e-62 Identity = 135/152 (88.82%), Postives = 142/152 (93.42%), Query Frame = 0
BLAST of CSPI06G14700 vs. TAIR 10
Match: AT3G46030.1 (Histone superfamily protein ) HSP 1 Score: 233.8 bits (595), Expect = 9.2e-62 Identity = 135/152 (88.82%), Postives = 138/152 (90.79%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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