CSPI06G14510 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G14510
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 12698902 .. 12699553 (-)
RNA-Seq ExpressionCSPI06G14510
SyntenyCSPI06G14510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
GATGTTTATGCTAAATCAAGCTGGAATTGTCAAAGACATAGAAAACCGAGACTACACGAAAAATTAGATGAAACGGAGCATGAGTATTTTGGAGCTTATTTCGAGCTGTTCAAGAGTTCTCAATGCTTAAAATTCAGAGGTTAGTTAGTTAAGGAGTTTTCTATGAGTTTTATGCAAAATATTTTAAGTAATTTGGTCTAAATTTGATGAAATTAGAGTTGATTTACAAAACGTGTATGTTGTTCGCGTTCAAGATGTATATGGTGTAAAGACTGAAGATTTTCTCTCAAACAGTGGAGTAATTGAAACATTTTCTTCAAAAAAGTTGTAGAGCATCGAGCAAGAAAAAAATTTGGTGACTTTCTGGAAGAATCCCGAGACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGGATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCGTGAGCGCTAACTTATTGGGTAATTTAGTTTGGCTGTAGTTAAAGATTTTTGTGAAATAAATTAAGTGATTTTTCAGTTTGATTGATCAGAATAGAAATTGGAAAATTCTGCAACTCTTCGTCAGAAAAACAGAGCACCATGAAAATATTGATTGGTTTTGGACGTTGTAG

mRNA sequence

GATGTTTATGCTAAATCAAGCTGGAATTGTCAAAGACATAGAAAACCGAGACTACACGAAAAATTAGATGAAACGGAGCATGAGTATTTTGGAGCTTATTTCGAGCTGTTCAAGAGTTCTCAATGCTTAAAATTCAGAGATGTATATGGTGTAAAGACTGAAGATTTTCTCTCAAACAGTGGAAATCCCGAGACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGGATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCAATAGAAATTGGAAAATTCTGCAACTCTTCGTCAGAAAAACAGAGCACCATGAAAATATTGATTGGTTTTGGACGTTGTAG

Coding sequence (CDS)

GATGTTTATGCTAAATCAAGCTGGAATTGTCAAAGACATAGAAAACCGAGACTACACGAAAAATTAGATGAAACGGAGCATGAGTATTTTGGAGCTTATTTCGAGCTGTTCAAGAGTTCTCAATGCTTAAAATTCAGAGATGTATATGGTGTAAAGACTGAAGATTTTCTCTCAAACAGTGGAAATCCCGAGACTGGAAAGGTTGTCAAATGGAGATTAGTAAGGTGTGCAGATTTTCTTAAAAACAGAGCAATCAAGGATTTAATCAAAATTCCGAGTCATCTGAGGCAATTCAATAGAAATTGGAAAATTCTGCAACTCTTCGTCAGAAAAACAGAGCACCATGAAAATATTGATTGGTTTTGGACGTTGTAG

Protein sequence

DVYAKSSWNCQRHRKPRLHEKLDETEHEYFGAYFELFKSSQCLKFRDVYGVKTEDFLSNSGNPETGKVVKWRLVRCADFLKNRAIKDLIKIPSHLRQFNRNWKILQLFVRKTEHHENIDWFWTL*
Homology
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BLAST of CSPI06G14510 vs. NCBI nr
Match: KAE8646969.1 (hypothetical protein Csa_020592, partial [Cucumis sativus])

HSP 1 Score: 79.0 bits (193), Expect = 3.3e-11
Identity = 36/37 (97.30%), Postives = 37/37 (100.00%), Query Frame = 0 

Query: 62 NPETGKVVKWRLVRCADFLKNRAIKDLIKIPSHLRQF 99
          NPETGKVVKWRLVRCADFLKNRAIK+LIKIPSHLRQF
Sbjct: 14 NPETGKVVKWRLVRCADFLKNRAIKNLIKIPSHLRQF 50

The following BLAST results are available for this feature:
BLAST of CSPI06G14510 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G14510 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G14510 vs. NCBI nr
Match NameE-valueIdentityDescription
KAE8646969.13.3e-1197.30hypothetical protein Csa_020592, partial [Cucumis sativus][more]
BLAST of CSPI06G14510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G14510.1CSPI06G14510.1mRNA