CSPI06G14230 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GTTAAAGAACAATTCACCCTCTTCTTTCATTTGTTTGCCTTATATTTCTCCTCCAATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTCTCGCGTCTGATTATCTACGTAAATCCACCAATGTACATTATGATGTATGTGCGTGTGTGCGCGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATTTCACACACTTCATCTTACTCATAATTTAACACCCTGC GTTAAAGAACAATTCACCCTCTTCTTTCATTTGTTTGCCTTATATTTCTCCTCCAATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAAGAAGAAGATGGAGATTGTGGATCGATTCTCGCGTCTGATTATCTACGTAAATCCACCAATGTACATTATGATGTATGTGCGTGTGTGCGCGTGTGTGTTTGTTCATCAATTCCGTTAAGATCTCCATGAATACTTCCTCTGGTTTTAAGATTTCACACACTTCATCTTACTCATAATTTAACACCCTGC ATGAGTGCAAATCAAACTGTCGTCGTTGATTTTCTCAGAGGATCAATGGAGAACGAATACAAACCCAGATTGCCTAAACCTCCAACCAGGTTGCAGAAGCAGGCGCCGGCCAGTCTTCATCTCGATCAACTTTCAAGCGTCTCAATGTCTTCTGCTAGTAACGACATTTGTTCCAAGGCGATTCTTCCTCTCCTATCGCCACTTCCTCTATCGCCACAGCCCTTGCCTGAAATCGACGGAAATAGAATATCTGCAAACGGAAATGCCGTAGACGGCGGCGGTGGTAATGGGGATCAAAGAGGAATAGGTTTTGTAGCTCCTGGTGGTTGGCAACATCCGGCAGTGGCAGCGACATTTCCTGATCCTTCTACGCTGTTTACTTTCTTTCAATCGCAATGCATGGTAAGCAGTAACACACCGTAA MSANQTVVVDFLRGSMENEYKPRLPKPPTRLQKQAPASLHLDQLSSVSMSSASNDICSKAILPLLSPLPLSPQPLPEIDGNRISANGNAVDGGGGNGDQRGIGFVAPGGWQHPAVAATFPDPSTLFTFFQSQCMVSSNTP* Homology
BLAST of CSPI06G14230 vs. ExPASy TrEMBL
Match: A0A0A0KBQ7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G188670 PE=4 SV=1) HSP 1 Score: 279.3 bits (713), Expect = 9.2e-72 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CSPI06G14230 vs. ExPASy TrEMBL
Match: A0A5A7V856 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00270 PE=4 SV=1) HSP 1 Score: 236.1 bits (601), Expect = 8.9e-59 Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of CSPI06G14230 vs. ExPASy TrEMBL
Match: A0A6J1D5B7 (uncharacterized protein LOC111017071 OS=Momordica charantia OX=3673 GN=LOC111017071 PE=4 SV=1) HSP 1 Score: 124.4 bits (311), Expect = 3.8e-25 Identity = 73/107 (68.22%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of CSPI06G14230 vs. ExPASy TrEMBL
Match: A0A6P3ZH11 (uncharacterized protein LOC107411018 OS=Ziziphus jujuba OX=326968 GN=LOC107411018 PE=4 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 1.1e-16 Identity = 61/114 (53.51%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of CSPI06G14230 vs. ExPASy TrEMBL
Match: A0A7J7DE91 (Uncharacterized protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW07G00153 PE=4 SV=1) HSP 1 Score: 93.2 bits (230), Expect = 9.3e-16 Identity = 56/125 (44.80%), Postives = 74/125 (59.20%), Query Frame = 0
BLAST of CSPI06G14230 vs. NCBI nr
Match: XP_011657141.1 (uncharacterized protein LOC105435808 [Cucumis sativus] >XP_031742438.1 uncharacterized protein LOC116404357 [Cucumis sativus] >KAE8645882.1 hypothetical protein Csa_017707 [Cucumis sativus]) HSP 1 Score: 279.3 bits (713), Expect = 1.9e-71 Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
BLAST of CSPI06G14230 vs. NCBI nr
Match: XP_038902307.1 (uncharacterized protein LOC120088941 [Benincasa hispida]) HSP 1 Score: 259.6 bits (662), Expect = 1.6e-65 Identity = 129/140 (92.14%), Postives = 134/140 (95.71%), Query Frame = 0
BLAST of CSPI06G14230 vs. NCBI nr
Match: KAA0061869.1 (uncharacterized protein E6C27_scaffold89G001110 [Cucumis melo var. makuwa] >TYK15387.1 uncharacterized protein E5676_scaffold571G00270 [Cucumis melo var. makuwa]) HSP 1 Score: 236.1 bits (601), Expect = 1.8e-58 Identity = 119/125 (95.20%), Postives = 121/125 (96.80%), Query Frame = 0
BLAST of CSPI06G14230 vs. NCBI nr
Match: KAG6605440.1 (hypothetical protein SDJN03_02757, partial [Cucurbita argyrosperma subsp. sororia] >KAG7035388.1 hypothetical protein SDJN02_02184, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 208.0 bits (528), Expect = 5.4e-50 Identity = 108/140 (77.14%), Postives = 116/140 (82.86%), Query Frame = 0
BLAST of CSPI06G14230 vs. NCBI nr
Match: XP_023512816.1 (uncharacterized protein LOC111777440 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 201.4 bits (511), Expect = 5.0e-48 Identity = 100/140 (71.43%), Postives = 116/140 (82.86%), Query Frame = 0
BLAST of CSPI06G14230 vs. TAIR 10
Match: AT1G07473.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G07476.1); Has 22 Blast hits to 22 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 22; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 47.0 bits (110), Expect = 1.5e-05 Identity = 25/54 (46.30%), Postives = 32/54 (59.26%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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