CSPI06G13980 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G13980
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Ubiquitinyl hydrolase 1
Location	Chr6: 12355168 .. 12356137 (-)
RNA-Seq Expression	CSPI06G13980
Synteny	CSPI06G13980

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGAGAGAGGATTGCGGAGTTTATCACGAGAGGCAAAAGCTACAGTTGTGTCTCTTGCACGCTCTCAATAACCTATTTCAGGTATCTTTTCGTCCTCAACCATTTGACTGTGAAAGCTTCCGAACTGTTTTCTTGTTGCTTCATATTGAAATATCGTTGTATCTTGAAATTGATTATTTGGTGTGTAATTAAGATGCTGATTAACGGAATTATACTGTTTCTCATCATTAAGAAAGAACTATGGCGCATAGGATTCCAGAATTAGAAGTTACCTCTCACTGCTTCACGATTTATTGCATTCTTTATGTATTTTGATGTCTTCTTATCATTATATCTTCTATTTGCACCATAAATGTCTTTCATAACAGAAAAATATGCATTTACTCGAGCGAACTTATCCTCTCACTGTTTCACGATTTATTGCCTTCTTTGTGTATTTTAAAAGTCTTCTTATCAGTATATCTTCCATTTCCACCATAAATGTCTTTAATAACAGGAAAAGGATGCATTTACTCGAGCAAACTTAAATGCAATTGCTGAAAAGCTGGTGCGCGATGTGCCGAACCAAGAAACTTGGACGCCATTATCAATTGTCTTTAAGCCTCATCACAACACAGTAACCGGAAATTATGACATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTAGTGTGGCATGACCATCGGAATGGAGCTTTCTCAATCGATTTGGATGGACCTGATCATACTTGTAAACTAATGGGAATTGTACTTAATGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAGTAGGCACTGGGTTGCTTTGAGAAAGATCGATGGATTATGGTATAATTTGGACAGTGATCTGCCGGATCCTCATCCATTTAAGGACACTGACGAATTAAGACAATTCTTGGATCATGTGATCAATGACAACGGGGAAATTTTGCTTGTTATGAATGACAGGAACTAA

mRNA sequence

ATGGCGAGAGAGGATTGCGGAGTTTATCACGAGAGGCAAAAGCTACAGTTGTGTCTCTTGCACGCTCTCAATAACCTATTTCAGGAAAAGGATGCATTTACTCGAGCAAACTTAAATGCAATTGCTGAAAAGCTGGTGCGCGATGTGCCGAACCAAGAAACTTGGACGCCATTATCAATTGTCTTTAAGCCTCATCACAACACAGTAACCGGAAATTATGACATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTAGTGTGGCATGACCATCGGAATGGAGCTTTCTCAATCGATTTGGATGGACCTGATCATACTTGTAAACTAATGGGAATTGTACTTAATGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAGTAGGCACTGGGTTGCTTTGAGAAAGATCGATGGATTATGGTATAATTTGGACAGTGATCTGCCGGATCCTCATCCATTTAAGGACACTGACGAATTAAGACAATTCTTGGATCATGTGATCAATGACAACGGGGAAATTTTGCTTGTTATGAATGACAGGAACTAA

Coding sequence (CDS)

ATGGCGAGAGAGGATTGCGGAGTTTATCACGAGAGGCAAAAGCTACAGTTGTGTCTCTTGCACGCTCTCAATAACCTATTTCAGGAAAAGGATGCATTTACTCGAGCAAACTTAAATGCAATTGCTGAAAAGCTGGTGCGCGATGTGCCGAACCAAGAAACTTGGACGCCATTATCAATTGTCTTTAAGCCTCATCACAACACAGTAACCGGAAATTATGACATAAATGTCCTAATTTCAGCTCTGGAAGAGAAAGGGAAGAGTGTAGTGTGGCATGACCATCGGAATGGAGCTTTCTCAATCGATTTGGATGGACCTGATCATACTTGTAAACTAATGGGAATTGTACTTAATGTCTCAGTTAGAAGGTTTGGTGGCATTTGGAAAAGTAGGCACTGGGTTGCTTTGAGAAAGATCGATGGATTATGGTATAATTTGGACAGTGATCTGCCGGATCCTCATCCATTTAAGGACACTGACGAATTAAGACAATTCTTGGATCATGTGATCAATGACAACGGGGAAATTTTGCTTGTTATGAATGACAGGAACTAA

Protein sequence

MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSIVFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVSVRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVMNDRN*

Homology

[Close]

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot
Match: O82391 (Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1)

HSP 1 Score: 249.6 bits (636), Expect = 2.8e-65
Identity = 115/167 (68.86%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA  +  +YHERQ+LQ CLLH LNNLFQ+KDAFT+ +LN+IAEKL  + PN+ETWTPLS 
Sbjct: 1   MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           V KPHHNT+TGNYD+NV+I+ALE KGKSVVWHD R GA SIDLD  D    LMGIVLNV 
Sbjct: 61  VLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDAD---TLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLD 168
           V+R+GG+W+SRHWV +RKI+G+WYNLDSDL  P  F+D DE+R FLD
Sbjct: 121 VKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLD 164

[Close]

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot
Match: Q5EAE5 (Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1)

HSP 1 Score: 116.7 bits (291), Expect = 2.8e-25
Identity = 68/180 (37.78%), Postives = 102/180 (56.67%), Query Frame = 0


Query: 8   VYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSIVFKPHHN 67
           +YHE+Q+ +LC LHALNN+FQ+ +AFTR  L  I ++L          +P ++V  PH  
Sbjct: 26  IYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL----------SPNTMV-TPHKK 85

Query: 68  TV--TGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVSVRRFG 127
           ++   GNYD+NV+++AL+ KG   VW D R    +I L        +MG ++N+      
Sbjct: 86  SMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGAIAL------TNVMGFIMNLPSSLCW 145

Query: 128 G----IWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVI-NDNGEILLVM 181
           G      K +HW+ +R++ G +YNLDS L  P       ELR+FL H +   N E+LLV+
Sbjct: 146 GPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGKSELRKFLKHHLRGKNCELLLVV 188

[Close]

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot
Match: Q5BJY4 (Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1)

HSP 1 Score: 115.9 bits (289), Expect = 4.8e-25
Identity = 69/180 (38.33%), Postives = 99/180 (55.00%), Query Frame = 0


Query: 8   VYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSIVFKPHHN 67
           +YHE+Q+ +LC LHALNN+FQ+ +AFTR  L  I ++L    PN         V  PH  
Sbjct: 26  IYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL---SPN--------TVVTPHKK 85

Query: 68  TV--TGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVSVRRFG 127
           ++   GNYD+NV+++AL+ KG   VW D R     I L        +MG ++N+      
Sbjct: 86  SMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL------ANVMGFIMNLPSSLCW 145

Query: 128 G----IWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLD-HVINDNGEILLVM 181
           G      K +HW+ +R++ G +YNLDS L  P       ELR+FL  H+   N E+LLV+
Sbjct: 146 GPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVV 188

[Close]

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot
Match: Q15040 (Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-25
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 8   VYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSIVFKPHHN 67
           +YHE+Q+ +LC LHALNN+FQ+ +AFTR  L  I ++L          +P ++V  PH  
Sbjct: 26  IYHEKQRRELCALHALNNVFQDSNAFTRDTLQEIFQRL----------SPNTMV-TPHKK 85

Query: 68  TV--TGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVSVRRFG 127
           ++   GNYD+NV+++AL+ KG   VW D R     I L        +MG ++N+      
Sbjct: 86  SMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL------TNVMGFIMNLPSSLCW 145

Query: 128 G----IWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVI-NDNGEILLVM 181
           G      K +HW+ +R++ G +YNLDS L  P       ELR+FL H +   N E+LLV+
Sbjct: 146 GPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKHHLRGKNCELLLVV 188

[Close]

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot
Match: Q9DBJ6 (Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1)

HSP 1 Score: 115.2 bits (287), Expect = 8.1e-25
Identity = 68/180 (37.78%), Postives = 101/180 (56.11%), Query Frame = 0


Query: 8   VYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSIVFKPHHN 67
           +YHE+Q+ +LC LHALNN+FQ+ +AFTR  L  I ++L          +P ++V  PH  
Sbjct: 26  IYHEKQRRELCALHALNNVFQDSNAFTRETLQEIFQRL----------SPNTMV-TPHKK 85

Query: 68  TV--TGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVSVRRFG 127
           ++   GNYD+NV+++AL+ KG   VW D R     I L        +MG ++N+      
Sbjct: 86  SMLGNGNYDVNVIMAALQTKGYEAVWWDKRRDVGVIAL------TNVMGFIMNLPSSLCW 145

Query: 128 G----IWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLD-HVINDNGEILLVM 181
           G      K +HW+ +R++ G +YNLDS L  P       ELR+FL  H+   N E+LLV+
Sbjct: 146 GPLKLPLKRQHWICVREVGGAYYNLDSKLKMPEWIGGESELRKFLKYHLRGKNCELLLVV 188

[Close]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL
Match: A0A0A0KBN9 (Ubiquitinyl hydrolase 1 OS=Cucumis sativus OX=3659 GN=Csa_6G187930 PE=4 SV=1)

HSP 1 Score: 394.8 bits (1013), Expect = 2.0e-106
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI
Sbjct: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS
Sbjct: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL
Match: A0A1S4E4I3 (Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           M REDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRD PNQETWTPLSI
Sbjct: 2   MVREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDEPNQETWTPLSI 61

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGA +IDLDGPD T KLMGIVLNVS
Sbjct: 62  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGASTIDLDGPDDTRKLMGIVLNVS 121

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKIDGLWYNLDSDLP PHPFKDT+E+R+FLDHVINDNGEILLVM
Sbjct: 122 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPAPHPFKDTEEVREFLDHVINDNGEILLVM 181

Query: 181 NDRN 185
           NDRN
Sbjct: 182 NDRN 185

[Close]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL
Match: A0A5D3CVY1 (Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold571G00510 PE=4 SV=1)

HSP 1 Score: 371.7 bits (953), Expect = 1.8e-99
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           M REDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRD PNQETWTPLSI
Sbjct: 2   MVREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDEPNQETWTPLSI 61

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGA +IDLDGPD T KLMGIVLNVS
Sbjct: 62  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGASTIDLDGPDDTRKLMGIVLNVS 121

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKIDGLWYNLDSDLP PHPFKDT+E+R+FLDHVINDNGEILLVM
Sbjct: 122 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPAPHPFKDTEEVREFLDHVINDNGEILLVM 181

Query: 181 NDRN 185
           NDRN
Sbjct: 182 NDRN 185

[Close]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL
Match: A0A6J1JI12 (Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1)

HSP 1 Score: 340.5 bits (872), Expect = 4.4e-90
Identity = 161/184 (87.50%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA EDC VYHERQKLQ CLLHALNNLFQE +AFTRA+LNAIAEKLV D PN+E WTPLS 
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENNAFTRAHLNAIAEKLVLDEPNKEPWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHDHRNGA SIDLDGP+ T KLMGIVLNV 
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKI+ LWYNLDSDLP PH FKDTDE+RQFLD+VINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLPTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL
Match: A0A6J1FYW5 (Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1)

HSP 1 Score: 334.7 bits (857), Expect = 2.4e-88
Identity = 158/184 (85.87%), Postives = 167/184 (90.76%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA EDC VYHERQKLQ CLLHALNNLFQE DAFTRA+LNAI+EKLV D PN+E WTPLS 
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHN+VTGNYDINVLISA+EEKGKSVVWHDHRNGA SIDLDGP+ T KLMGIVLNV 
Sbjct: 61  VFKPHHNSVTGNYDINVLISAMEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKI+  WYNLDSDL  PH FKDTDE+RQFLD+VINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKINESWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. NCBI nr
Match: XP_004143148.2 (josephin-like protein [Cucumis sativus] >XP_011657130.1 josephin-like protein [Cucumis sativus] >XP_011657131.1 josephin-like protein [Cucumis sativus] >XP_031742677.1 josephin-like protein [Cucumis sativus] >XP_031742678.1 josephin-like protein [Cucumis sativus] >KGN47100.1 hypothetical protein Csa_020598 [Cucumis sativus])

HSP 1 Score: 394.8 bits (1013), Expect = 4.1e-106
Identity = 184/184 (100.00%), Postives = 184/184 (100.00%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI
Sbjct: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS
Sbjct: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. NCBI nr
Match: XP_016903134.1 (PREDICTED: josephin-like protein [Cucumis melo] >XP_016903135.1 PREDICTED: josephin-like protein [Cucumis melo] >KAA0061848.1 josephin-like protein [Cucumis melo var. makuwa] >TYK15408.1 josephin-like protein [Cucumis melo var. makuwa])

HSP 1 Score: 371.7 bits (953), Expect = 3.7e-99
Identity = 174/184 (94.57%), Postives = 178/184 (96.74%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           M REDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRD PNQETWTPLSI
Sbjct: 2   MVREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDEPNQETWTPLSI 61

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGA +IDLDGPD T KLMGIVLNVS
Sbjct: 62  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGASTIDLDGPDDTRKLMGIVLNVS 121

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKIDGLWYNLDSDLP PHPFKDT+E+R+FLDHVINDNGEILLVM
Sbjct: 122 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPAPHPFKDTEEVREFLDHVINDNGEILLVM 181

Query: 181 NDRN 185
           NDRN
Sbjct: 182 NDRN 185

[Close]

BLAST of CSPI06G13980 vs. NCBI nr
Match: XP_038902688.1 (josephin-like protein [Benincasa hispida] >XP_038902689.1 josephin-like protein [Benincasa hispida])

HSP 1 Score: 352.1 bits (902), Expect = 3.0e-93
Identity = 165/184 (89.67%), Postives = 171/184 (92.93%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA EDC VYHERQKLQ CLLHALNNLFQEKDAFTRANLNAIAEKLV D PN+E WTPLS 
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQEKDAFTRANLNAIAEKLVLDEPNEERWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHNTVTGNYDINVLISALEEKGK VVWHDHRNGA SIDLDGP+ T KLMGIVLNVS
Sbjct: 61  VFKPHHNTVTGNYDINVLISALEEKGKIVVWHDHRNGASSIDLDGPEDTHKLMGIVLNVS 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKI+GLWYNLDSDLP PHPFKDTDE+RQFLDHVI +NGEILL+M
Sbjct: 121 VRRFGGIWKSRHWVALRKINGLWYNLDSDLPAPHPFKDTDEVRQFLDHVIGNNGEILLIM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. NCBI nr
Match: XP_022986948.1 (josephin-like protein [Cucurbita maxima])

HSP 1 Score: 340.5 bits (872), Expect = 9.1e-90
Identity = 161/184 (87.50%), Postives = 169/184 (91.85%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA EDC VYHERQKLQ CLLHALNNLFQE +AFTRA+LNAIAEKLV D PN+E WTPLS 
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENNAFTRAHLNAIAEKLVLDEPNKEPWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHDHRNGA SIDLDGP+ T KLMGIVLNV 
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKI+ LWYNLDSDLP PH FKDTDE+RQFLD+VINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLPTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. NCBI nr
Match: KAG6570667.1 (Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 337.8 bits (865), Expect = 5.9e-89
Identity = 160/184 (86.96%), Postives = 168/184 (91.30%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA EDC VYHERQKLQ CLLHALNNLFQE DAFTRA+LNAI+EKLV D PN+E WTPLS 
Sbjct: 1   MASEDCRVYHERQKLQFCLLHALNNLFQENDAFTRAHLNAISEKLVLDEPNREPWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           VFKPHHN+VTGNYDINVLISALEEKGKSVVWHDHRNGA SIDLDGP+ T KLMGIVLNV 
Sbjct: 61  VFKPHHNSVTGNYDINVLISALEEKGKSVVWHDHRNGASSIDLDGPEATHKLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLVM 180
           VRRFGGIWKSRHWVALRKI+ LWYNLDSDL  PH FKDTDE+RQFLD+VINDNGEILLVM
Sbjct: 121 VRRFGGIWKSRHWVALRKINELWYNLDSDLHTPHTFKDTDEVRQFLDNVINDNGEILLVM 180

Query: 181 NDRN 185
           NDRN
Sbjct: 181 NDRN 184

[Close]

BLAST of CSPI06G13980 vs. TAIR 10
Match: AT2G29640.1 (JOSEPHIN-like protein )

HSP 1 Score: 249.6 bits (636), Expect = 2.0e-66
Identity = 115/167 (68.86%), Postives = 137/167 (82.04%), Query Frame = 0


Query: 1   MAREDCGVYHERQKLQLCLLHALNNLFQEKDAFTRANLNAIAEKLVRDVPNQETWTPLSI 60
           MA  +  +YHERQ+LQ CLLH LNNLFQ+KDAFT+ +LN+IAEKL  + PN+ETWTPLS 
Sbjct: 1   MADSESKIYHERQRLQFCLLHCLNNLFQDKDAFTKESLNSIAEKLETNDPNKETWTPLSF 60

Query: 61  VFKPHHNTVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 120
           V KPHHNT+TGNYD+NV+I+ALE KGKSVVWHD R GA SIDLD  D    LMGIVLNV 
Sbjct: 61  VLKPHHNTITGNYDVNVMITALEGKGKSVVWHDKRIGASSIDLDDAD---TLMGIVLNVP 120

Query: 121 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLD 168
           V+R+GG+W+SRHWV +RKI+G+WYNLDSDL  P  F+D DE+R FLD
Sbjct: 121 VKRYGGLWRSRHWVVVRKINGVWYNLDSDLVVPQLFRDDDEVRGFLD 164

[Close]

BLAST of CSPI06G13980 vs. TAIR 10
Match: AT3G54130.1 (Josephin family protein )

HSP 1 Score: 48.9 bits (115), Expect = 5.1e-06
Identity = 49/179 (27.37%), Postives = 75/179 (41.90%), Query Frame = 0


Query: 8   VYHERQKLQLCLLHALNNL-----FQEKD-AFTRANLNAIAEKLVRDVPNQETWTPLSIV 67
           +YHE Q+  LC +H +N +     F E D A   A+L+    +++ +      + P   +
Sbjct: 10  LYHEVQESNLCAVHCVNTVLQGPFFSEFDLAAVAADLDGKERQVMLEGAAVGGFAPGDFL 69

Query: 68  FKPHHN-TVTGNYDINVLISALEEKGKSVVWHDHRNGAFSIDLDGPDHTCKLMGIVLNVS 127
            +  HN ++ G++ I VL  ALE      VW         I L+ PD     +   L  +
Sbjct: 70  AEESHNVSLGGDFSIQVLQKALE------VW-----DLQVIPLNCPDAEPAQIDPELESA 129

Query: 128 VRRFGGIWKSRHWVALRKIDGLWYNLDSDLPDPHPFKDTDELRQFLDHVINDNGEILLV 180
                      HW  +RK++G WYN DS L  P        L  FLD +      I +V
Sbjct: 130 FI----CHLHDHWFCIRKVNGEWYNFDSLLAAPQHLSKF-YLSAFLDSLKGAGWSIFIV 172

The following BLAST results are available for this feature:

BLAST of CSPI06G13980 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O82391	2.8e-65	68.86	Josephin-like protein OS=Arabidopsis thaliana OX=3702 GN=At2g29640 PE=2 SV=1	[more]
Q5EAE5	2.8e-25	37.78	Josephin-1 OS=Bos taurus OX=9913 GN=JOSD1 PE=2 SV=1	[more]
Q5BJY4	4.8e-25	38.33	Josephin-1 OS=Rattus norvegicus OX=10116 GN=Josd1 PE=2 SV=1	[more]
Q15040	8.1e-25	37.78	Josephin-1 OS=Homo sapiens OX=9606 GN=JOSD1 PE=1 SV=1	[more]
Q9DBJ6	8.1e-25	37.78	Josephin-1 OS=Mus musculus OX=10090 GN=Josd1 PE=1 SV=1	[more]

BLAST of CSPI06G13980 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KBN9	2.0e-106	100.00	Ubiquitinyl hydrolase 1 OS=Cucumis sativus OX=3659 GN=Csa_6G187930 PE=4 SV=1	[more]
A0A1S4E4I3	1.8e-99	94.57	Ubiquitinyl hydrolase 1 OS=Cucumis melo OX=3656 GN=LOC103502098 PE=4 SV=1	[more]
A0A5D3CVY1	1.8e-99	94.57	Ubiquitinyl hydrolase 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A6J1JI12	4.4e-90	87.50	Ubiquitinyl hydrolase 1 OS=Cucurbita maxima OX=3661 GN=LOC111484533 PE=4 SV=1	[more]
A0A6J1FYW5	2.4e-88	85.87	Ubiquitinyl hydrolase 1 OS=Cucurbita moschata OX=3662 GN=LOC111449101 PE=4 SV=1	[more]

BLAST of CSPI06G13980 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004143148.2	4.1e-106	100.00	josephin-like protein [Cucumis sativus] >XP_011657130.1 josephin-like protein [C...	[more]
XP_016903134.1	3.7e-99	94.57	PREDICTED: josephin-like protein [Cucumis melo] >XP_016903135.1 PREDICTED: josep...	[more]
XP_038902688.1	3.0e-93	89.67	josephin-like protein [Benincasa hispida] >XP_038902689.1 josephin-like protein ...	[more]
XP_022986948.1	9.1e-90	87.50	josephin-like protein [Cucurbita maxima]	[more]
KAG6570667.1	5.9e-89	86.96	Josephin-like protein, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of CSPI06G13980 vs. TAIR 10


Match Name	E-value	Identity	Description
AT2G29640.1	2.0e-66	68.86	JOSEPHIN-like protein	[more]
AT3G54130.1	5.1e-06	27.37	Josephin family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006155	Josephin domain	SMART	SM01246	Josephin_2	coord: 12..182 e-value: 5.7E-60 score: 215.2
IPR006155	Josephin domain	PFAM	PF02099	Josephin	coord: 13..179 e-value: 1.6E-36 score: 125.8
IPR006155	Josephin domain	PROSITE	PS50957	JOSEPHIN	coord: 5..184 score: 46.820934
None	No IPR available	GENE3D	3.90.70.40		coord: 17..184 e-value: 4.7E-26 score: 93.0
None	No IPR available	PANTHER	PTHR13291:SF0	JOSEPHIN-LIKE PROTEIN	coord: 2..183
IPR040053	Josephin-1/2	PANTHER	PTHR13291	JOSEPHIN 1, 2	coord: 2..183

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G13980.1	CSPI06G13980.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0016579	protein deubiquitination
molecular_function	GO:0004843	thiol-dependent deubiquitinase