Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCTGACATCAAGAACAAAAGTCTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGTCAACCTTCAAATCGGCACATCAAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACTGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATCGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAATGATTTCATTGAGTATGTATACCAAATCTTGAAAAAGGATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGAGAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATATTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATAATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGA
mRNA sequence
ATGGCTGACATCAAGAACAAAAGTCTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGTCAACCTTCAAATCGGCACATCAAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACTGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATCGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAATGATTTCATTGAGTATGTATACCAAATCTTGAAAAAGGATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGAGAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATATTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATAATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGA
Coding sequence (CDS)
ATGGCTGACATCAAGAACAAAAGTCTTGAAGAACAAGAACAAGATATCAACCTTCAAATCGTCAACCTTCAAATCGGCACATCAAATTCTCAAAAACAGATGGAGATATTTTCAAATAATGAAGAATTGGAGAGATCACTGAATGGATCGAGAAACACAGAATCAAACGAAGCAGGATCATCGAAAAAGAATGAACAAGAATCTGATTATGATTCTGGTTCTGATTCGGATATCGATGATCCTCTGTTAGTAATAGAGAAAATTCTATTGAAATACAATGATTTCATTGAGTATGTATACCAAATCTTGAAAAAGGATGAAGAGAAACAAGATTGGAGTGAGATTGTTGAGATAGTACAAAAGCTGGTTAAAACTTTGAATCAACATATGAGAGTAGTGGATTTTTATATGAAATGTCTTGAAGAGTTGGGATGTTTTGAGAAGCAATATCAATTCAGAGAAACTCATATTCTTAATATATTAGATGTGATTCGACATATAAATACAAGAATTGCAAGTTCGAGTAGTTTTAGACTTGTTTCGGATAATCAAGAACAGAGGAAAAGTGTTGCCCATATGTTTAGGGGAGTTTGA
Protein sequence
MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGSSKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEIVQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSSFRLVSDNQEQRKSVAHMFRGV*
Homology
BLAST of CSPI06G13740 vs. ExPASy TrEMBL
Match:
A0A0A0KF99 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185220 PE=4 SV=1)
HSP 1 Score: 326.2 bits (835), Expect = 9.2e-86
Identity = 176/188 (93.62%), Postives = 180/188 (95.74%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
MADIKNKS+EEQEQDINLQI NLQIGTSNSQKQMEIFSNNEELERS NGSRNTESNEAGS
Sbjct: 1 MADIKNKSVEEQEQDINLQIANLQIGTSNSQKQMEIFSNNEELERSPNGSRNTESNEAGS 60
Query: 61 SKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEIVQ 120
SKKNEQESDYDSGSDSD+DDPLLVIEKILLKYNDFIEYVYQILKK EEKQDWSEIVEIVQ
Sbjct: 61 SKKNEQESDYDSGSDSDMDDPLLVIEKILLKYNDFIEYVYQILKKYEEKQDWSEIVEIVQ 120
Query: 121 KLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSSFRLV 180
KLVKTLNQHM VVDFYMKCLEELGCFEKQYQFRETH LNILDVIRHINTRIASSSSFRLV
Sbjct: 121 KLVKTLNQHMIVVDFYMKCLEELGCFEKQYQFRETHTLNILDVIRHINTRIASSSSFRLV 180
Query: 181 SDNQEQRK 189
SD + + K
Sbjct: 181 SDIKNRGK 188
BLAST of CSPI06G13740 vs. ExPASy TrEMBL
Match:
A0A5A7VJB2 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00360 PE=4 SV=1)
HSP 1 Score: 193.7 bits (491), Expect = 7.1e-46
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
M DIK K+++EQEQ Q VNLQIGTS SQ+Q++I NEEL+RS R T SNEA S
Sbjct: 18 MVDIKKKNIQEQEQ--QEQDVNLQIGTSISQQQIKIVPTNEELDRSPKQPRITGSNEAES 77
Query: 61 SKKNEQESDYDSGSDSDID----DPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWS-EI 120
SK+NEQESDYDSGSDS + DPLLV E++LLKY +FIEYVYQILK DEEKQDWS EI
Sbjct: 78 SKQNEQESDYDSGSDSTFNEIEQDPLLVTEEVLLKYYEFIEYVYQILKNDEEKQDWSFEI 137
Query: 121 VEIVQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSS 180
++ V LV TL + +RVV M LE + EK+Y+F++THILNIL +IRHIN IASSS
Sbjct: 138 IDRVNTLVMTLGRKLRVVMLDMARLEVVDVAEKEYEFKKTHILNILALIRHINVGIASSS 197
Query: 181 SFRLVSDNQEQRK 189
SFRLVSD + +RK
Sbjct: 198 SFRLVSDIKNRRK 208
BLAST of CSPI06G13740 vs. ExPASy TrEMBL
Match:
A0A0A0KC44 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185230 PE=4 SV=1)
HSP 1 Score: 191.0 bits (484), Expect = 4.6e-45
Identity = 121/190 (63.68%), Postives = 143/190 (75.26%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQ-MEIFSNNEELE-RSLNGSRNTESNEA 60
+ DIKNK++++QEQDI NLQI TS SQ+Q +EI S NEEL RS N R TES+EA
Sbjct: 17 LPDIKNKNVQQQEQDI-----NLQIRTSTSQEQKIEIVSTNEELVIRSPNRPRITESDEA 76
Query: 61 GSSKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEI 120
SSKKNEQES D +DPLL EKILLKYNDFIEYVYQIL+KDE+KQDWSEIVE
Sbjct: 77 ESSKKNEQESVSYLNCDELGEDPLLTTEKILLKYNDFIEYVYQILEKDEKKQDWSEIVER 136
Query: 121 VQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSSFR 180
VQ L KTLN+H+ V+ M+ LEE+G FEKQY FR+ HI++ILDVI+ IN IASS SFR
Sbjct: 137 VQMLDKTLNEHLSYVEISMEVLEEMGGFEKQYDFRKIHIVDILDVIQSINKGIASSGSFR 196
Query: 181 LVSDNQEQRK 189
LVSD + + K
Sbjct: 197 LVSDIKNRGK 201
BLAST of CSPI06G13740 vs. ExPASy TrEMBL
Match:
A0A5D3CAI3 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold615G00370 PE=4 SV=1)
HSP 1 Score: 183.7 bits (465), Expect = 7.3e-43
Identity = 116/189 (61.38%), Postives = 143/189 (75.66%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
MADI K+++EQ+Q + Q VNLQ TS SQ+Q+EI NEEL+RS R TESNEA S
Sbjct: 1 MADINKKNIQEQQQQLQ-QDVNLQNDTSISQQQIEIVPTNEELDRSPKQPRITESNEAES 60
Query: 61 SKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEIVQ 120
SK+NEQESD SDSD DPLL+ E+ILLKY DFIEYVYQ LK D EKQDWSEIVE +
Sbjct: 61 SKQNEQESD----SDSD-TDPLLLTEEILLKYKDFIEYVYQFLKNDGEKQDWSEIVERAK 120
Query: 121 KLVKTLNQHMRVVDFYMKCLEELG-CFEKQYQFRETHILNILDVIRHINTRIASSSSFRL 180
+LV + + +M +V M+CLE++G EK+Y+FRETHI NIL ++R+INTRIASSSSFRL
Sbjct: 121 RLVGSTHLNMAIVIVGMECLEDMGSSSEKKYKFRETHIPNILSLLRYINTRIASSSSFRL 180
Query: 181 VSDNQEQRK 189
VSD + + K
Sbjct: 181 VSDIKNRGK 183
BLAST of CSPI06G13740 vs. ExPASy TrEMBL
Match:
A0A0A0KH35 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185210 PE=4 SV=1)
HSP 1 Score: 169.9 bits (429), Expect = 1.1e-38
Identity = 104/186 (55.91%), Postives = 131/186 (70.43%), Query Frame = 0
Query: 3 DIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGSSK 62
DIKNK++++QEQDINLQI +++ ++ +EI NEEL RS SR TES+EA SSK
Sbjct: 19 DIKNKNIQQQEQDINLQI----CASTSQEQNIEIVLTNEELVRSPKRSRITESDEAESSK 78
Query: 63 KNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEIVQKL 122
NEQES + G + +DPLL E+ILLKYNDFIEYVYQILK DE+KQDWSEIV+ VQ L
Sbjct: 79 NNEQESYFFLGCEDLGEDPLLEAEEILLKYNDFIEYVYQILKNDEKKQDWSEIVKRVQNL 138
Query: 123 VKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSSFRLVSD 182
L+ + V+ F ++CLE+ FEKQY FR +HI NI+ VI IN I SS F LV D
Sbjct: 139 ANLLHLKLAVLIFDIECLEQHPRFEKQYNFRLSHIPNIITVIEQINIEIISSKCFSLVLD 198
Query: 183 NQEQRK 189
N+ +RK
Sbjct: 199 NKNRRK 200
BLAST of CSPI06G13740 vs. NCBI nr
Match:
KAA0067310.1 (hypothetical protein E6C27_scaffold179G00130 [Cucumis melo var. makuwa] >TYK09006.1 hypothetical protein E5676_scaffold615G00360 [Cucumis melo var. makuwa])
HSP 1 Score: 193.7 bits (491), Expect = 1.5e-45
Identity = 121/193 (62.69%), Postives = 145/193 (75.13%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
M DIK K+++EQEQ Q VNLQIGTS SQ+Q++I NEEL+RS R T SNEA S
Sbjct: 18 MVDIKKKNIQEQEQ--QEQDVNLQIGTSISQQQIKIVPTNEELDRSPKQPRITGSNEAES 77
Query: 61 SKKNEQESDYDSGSDSDID----DPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWS-EI 120
SK+NEQESDYDSGSDS + DPLLV E++LLKY +FIEYVYQILK DEEKQDWS EI
Sbjct: 78 SKQNEQESDYDSGSDSTFNEIEQDPLLVTEEVLLKYYEFIEYVYQILKNDEEKQDWSFEI 137
Query: 121 VEIVQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSS 180
++ V LV TL + +RVV M LE + EK+Y+F++THILNIL +IRHIN IASSS
Sbjct: 138 IDRVNTLVMTLGRKLRVVMLDMARLEVVDVAEKEYEFKKTHILNILALIRHINVGIASSS 197
Query: 181 SFRLVSDNQEQRK 189
SFRLVSD + +RK
Sbjct: 198 SFRLVSDIKNRRK 208
BLAST of CSPI06G13740 vs. NCBI nr
Match:
KGN47073.1 (hypothetical protein Csa_020750 [Cucumis sativus])
HSP 1 Score: 191.0 bits (484), Expect = 9.5e-45
Identity = 121/190 (63.68%), Postives = 143/190 (75.26%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQ-MEIFSNNEELE-RSLNGSRNTESNEA 60
+ DIKNK++++QEQDI NLQI TS SQ+Q +EI S NEEL RS N R TES+EA
Sbjct: 17 LPDIKNKNVQQQEQDI-----NLQIRTSTSQEQKIEIVSTNEELVIRSPNRPRITESDEA 76
Query: 61 GSSKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEI 120
SSKKNEQES D +DPLL EKILLKYNDFIEYVYQIL+KDE+KQDWSEIVE
Sbjct: 77 ESSKKNEQESVSYLNCDELGEDPLLTTEKILLKYNDFIEYVYQILEKDEKKQDWSEIVER 136
Query: 121 VQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSSFR 180
VQ L KTLN+H+ V+ M+ LEE+G FEKQY FR+ HI++ILDVI+ IN IASS SFR
Sbjct: 137 VQMLDKTLNEHLSYVEISMEVLEEMGGFEKQYDFRKIHIVDILDVIQSINKGIASSGSFR 196
Query: 181 LVSDNQEQRK 189
LVSD + + K
Sbjct: 197 LVSDIKNRGK 201
BLAST of CSPI06G13740 vs. NCBI nr
Match:
KAA0067309.1 (hypothetical protein E6C27_scaffold179G00120 [Cucumis melo var. makuwa] >TYK09007.1 hypothetical protein E5676_scaffold615G00370 [Cucumis melo var. makuwa])
HSP 1 Score: 183.7 bits (465), Expect = 1.5e-42
Identity = 116/189 (61.38%), Postives = 143/189 (75.66%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
MADI K+++EQ+Q + Q VNLQ TS SQ+Q+EI NEEL+RS R TESNEA S
Sbjct: 1 MADINKKNIQEQQQQLQ-QDVNLQNDTSISQQQIEIVPTNEELDRSPKQPRITESNEAES 60
Query: 61 SKKNEQESDYDSGSDSDIDDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWSEIVEIVQ 120
SK+NEQESD SDSD DPLL+ E+ILLKY DFIEYVYQ LK D EKQDWSEIVE +
Sbjct: 61 SKQNEQESD----SDSD-TDPLLLTEEILLKYKDFIEYVYQFLKNDGEKQDWSEIVERAK 120
Query: 121 KLVKTLNQHMRVVDFYMKCLEELG-CFEKQYQFRETHILNILDVIRHINTRIASSSSFRL 180
+LV + + +M +V M+CLE++G EK+Y+FRETHI NIL ++R+INTRIASSSSFRL
Sbjct: 121 RLVGSTHLNMAIVIVGMECLEDMGSSSEKKYKFRETHIPNILSLLRYINTRIASSSSFRL 180
Query: 181 VSDNQEQRK 189
VSD + + K
Sbjct: 181 VSDIKNRGK 183
BLAST of CSPI06G13740 vs. NCBI nr
Match:
KAA0067311.1 (hypothetical protein E6C27_scaffold179G00140 [Cucumis melo var. makuwa] >TYK09005.1 hypothetical protein E5676_scaffold615G00350 [Cucumis melo var. makuwa])
HSP 1 Score: 163.7 bits (413), Expect = 1.6e-36
Identity = 104/198 (52.53%), Postives = 137/198 (69.19%), Query Frame = 0
Query: 1 MADIKNKSLEEQEQDINLQIVNLQIGTSNSQKQMEIFSNNEELERSLNGSRNTESNEAGS 60
MADIK ++++EQEQDINL I L N +++++I S ++ELERS R T SNEA S
Sbjct: 17 MADIKKENIQEQEQDINLDICTL-----NCEEEIDIISTSDELERSPKRPRITGSNEAES 76
Query: 61 SKKNEQESDYDSGSDSDI-----DDPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWS-E 120
SKKNEQES+Y+ SD+ DPLLV E++LLKY +FI+YVYQILK DEEKQDWS E
Sbjct: 77 SKKNEQESEYNPDSDTSTFNEIGQDPLLVTEEVLLKYYEFIDYVYQILKNDEEKQDWSFE 136
Query: 121 IVEIVQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASS 180
I++ V LV TL + +RVV M LE + + Y+F++THI IL IR +N IASS
Sbjct: 137 IIDRVDTLVVTLGRRLRVVALDMAGLEAVDELQNIYEFKKTHIPVILSAIRQVNVEIASS 196
Query: 181 SSFRLVSDNQEQRKSVAH 193
SSFRLVSD + + K +++
Sbjct: 197 SSFRLVSDIKNRGKVLSN 209
BLAST of CSPI06G13740 vs. NCBI nr
Match:
KGN47070.1 (hypothetical protein Csa_020597 [Cucumis sativus])
HSP 1 Score: 150.6 bits (379), Expect = 1.4e-32
Identity = 101/192 (52.60%), Postives = 132/192 (68.75%), Query Frame = 0
Query: 3 DIKNKSLEEQEQDINLQIVNLQIGTSNSQKQ-MEIFSNNEELERSLNGSRNTESNEAGSS 62
DIKNK++++QEQDI NLQIGTS SQ+Q +I NE LE S R TES+EA SS
Sbjct: 19 DIKNKNIQQQEQDI-----NLQIGTSTSQEQTRDISLTNEALEGSPKRPRITESDEAESS 78
Query: 63 KKNEQESDYDSGSDSDID----DPLLVIEKILLKYNDFIEYVYQILKKDEEKQDWS-EIV 122
KKNEQESD +S DS + DPLLV+E+++LKY DFI Y+ QILK DE+KQDWS +I+
Sbjct: 79 KKNEQESDCES-DDSTFNYIGQDPLLVVEEVILKYYDFIVYLQQILKNDEKKQDWSIDII 138
Query: 123 EIVQKLVKTLNQHMRVVDFYMKCLEELGCFEKQYQFRETHILNILDVIRHINTRIASSSS 182
+ LV L + +RVV M LE + E +Y F+ I+N+L+V +INTRIASS+S
Sbjct: 139 DRADTLVMNLGRRLRVVTIDMAGLEAVEGMENEYAFKRASIVNVLNVFLYINTRIASSNS 198
Query: 183 FRLVSDNQEQRK 189
+LVSD + +RK
Sbjct: 199 LKLVSDIKNRRK 204
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KF99 | 9.2e-86 | 93.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185220 PE=4 SV=1 | [more] |
A0A5A7VJB2 | 7.1e-46 | 62.69 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KC44 | 4.6e-45 | 63.68 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185230 PE=4 SV=1 | [more] |
A0A5D3CAI3 | 7.3e-43 | 61.38 | Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold... | [more] |
A0A0A0KH35 | 1.1e-38 | 55.91 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G185210 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
KAA0067310.1 | 1.5e-45 | 62.69 | hypothetical protein E6C27_scaffold179G00130 [Cucumis melo var. makuwa] >TYK0900... | [more] |
KGN47073.1 | 9.5e-45 | 63.68 | hypothetical protein Csa_020750 [Cucumis sativus] | [more] |
KAA0067309.1 | 1.5e-42 | 61.38 | hypothetical protein E6C27_scaffold179G00120 [Cucumis melo var. makuwa] >TYK0900... | [more] |
KAA0067311.1 | 1.6e-36 | 52.53 | hypothetical protein E6C27_scaffold179G00140 [Cucumis melo var. makuwa] >TYK0900... | [more] |
KGN47070.1 | 1.4e-32 | 52.60 | hypothetical protein Csa_020597 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |