CSPI06G13190 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G13190
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein
Location	Chr6: 11670948 .. 11671727 (-)
RNA-Seq Expression	CSPI06G13190
Synteny	CSPI06G13190

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTTGAGGATTGTGCAAAAGTAAATGTAGAATTTGCTCAATTTTCTACAAAAAAAAATGGAGATTTTGATGACTATGATTCCATATCCGAGAGATACACTACAGATTCTAGAAGTTGATGGGCAACTCATAGGACTTATGTACCAATGCTTCAAAAGATTGATTTTAAAATTTTAGGGCAACCATCATCCTCTTCATGTTGTGAAGAAATTAGAGCATATATTCCTTTATTAACTTCATTAAGAATGCCTCAATGTGCAAAGGATTTGGTATTTATTCACAATAACCTTCGTCTTTTGTCTAGAAGAACTCCAGAATATTCAAAAGGAGAAACCAAGTCATGGGACATTGCTGGAAATGCTTTTGATTCGCTTGAAGATCTAGGCATGCTTGAAGTAGCTAACTTTTCTTTAGATGATCCAAAGTTGGAGGCTGAAATTATTAAGGATGATGGTGTTGATAAGGATGAAGATGTGTAGGTGATATATAATTTAATTTGTCTTCAACCATGAGCAACTTTTGGGTGAATTGGTAGTTTAATATGATATCAGAGTAGGTGGTCCAGGGAGGTCCTCTGTTCAAGCCCATGCATTGTTGTTTCCTCTCCAATTAAAATTGATTTTCACTTGTAGGGCCTTTCAAATATTTCAAACCCACAAGTGAGGAGTGTTGGTGATATATAATTAAATTTGCCTTCAACTATGAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATAAGATGTCAATGAGATTTGAGAGATAGCTTTTTATTAGCCTTTAA

mRNA sequence

CTTGAGGATTGTGCAAAAGTAAATGTAGAATTTGCTCAATTTTCTACAAAAAAAAATGGAGATTTTGATGACTATGATTCCATATCCGAGAGATACACTACAGATTCTAGAAGTTGATGGGCAACTCATAGGACTTATAATGCCTCAATGTGCAAAGGATTTGGTATTTATTCACAATAACCTTCGTCTTTTGTCTAGAAGAACTCCAGAATATTCAAAAGGAGAAACCAAGTCATGGGACATTGCTGGAAATGCTTTTGATTCGCTTGAAGATCTAGGCATGCTTGAAGTAGCTAACTTTTCTTTAGATGATCCAAAGTTGGAGGCTGAAATTATTAAGGATGATGGTGTTGATAAGGATGAAGATGTGTAGGTGATATATAATTTAATTTGTCTTCAACCATGAGCAACTTTTGGGTGAATTGGTAGTTTAATATGATATCAGAGTAGGTGGTCCAGGGAGGTCCTCTGTTCAAGCCCATGCATTGTTGTTTCCTCTCCAATTAAAATTGATTTTCACTTGTAGGGCCTTTCAAATATTTCAAACCCACAAGTGAGGAGTGTTGGTGATATATAATTAAATTTGCCTTCAACTATGAGCTTAAGCTTTTGGGTGAATTGGTGGTTTAATAAGATGTCAATGAGATTTGAGAGATAGCTTTTTATTAGCCTTTAA

Coding sequence (CDS)

ATGGAGATTTTGATGACTATGATTCCATATCCGAGAGATACACTACAGATTCTAGAAGTTGATGGGCAACTCATAGGACTTATAATGCCTCAATGTGCAAAGGATTTGGTATTTATTCACAATAACCTTCGTCTTTTGTCTAGAAGAACTCCAGAATATTCAAAAGGAGAAACCAAGTCATGGGACATTGCTGGAAATGCTTTTGATTCGCTTGAAGATCTAGGCATGCTTGAAGTAGCTAACTTTTCTTTAGATGATCCAAAGTTGGAGGCTGAAATTATTAAGGATGATGGTGTTGATAAGGATGAAGATGTGTAG

Protein sequence

MEILMTMIPYPRDTLQILEVDGQLIGLIMPQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKLEAEIIKDDGVDKDEDV*

Homology

[Close]

BLAST of CSPI06G13190 vs. ExPASy TrEMBL
Match: A0A5B7AFB0 (Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_023134 PE=4 SV=1)

HSP 1 Score: 116.3 bits (290), Expect = 7.7e-23
Identity = 51/75 (68.00%), Postives = 66/75 (88.00%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQCA+DLVF+H+NLRLLSRRTP+Y +GETK WDIAG+ FDS ED+G+LEVAN SLD+P+L
Sbjct: 646 PQCAEDLVFVHSNLRLLSRRTPQYMQGETKMWDIAGDTFDSFEDVGVLEVANLSLDEPEL 705

Query: 90  EAEIIKDDGVDKDED 105
           EA +  DDG +++E+
Sbjct: 706 EAVVFMDDGNEREEE 720

[Close]

BLAST of CSPI06G13190 vs. ExPASy TrEMBL
Match: A0A5D3BT24 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold29G00520 PE=4 SV=1)

HSP 1 Score: 107.5 bits (267), Expect = 3.6e-20
Identity = 54/76 (71.05%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQ A+DLV IH+NL LL R+T EY KGET+SWDI  +AF+SLED+ MLEVAN SLDD +L
Sbjct: 3   PQRAEDLVSIHSNLHLLFRKTLEYLKGETRSWDIVRDAFNSLEDVDMLEVANLSLDDREL 62

Query: 90  EAEIIKDDGVDKDEDV 106
           EAEIIK+DG  KDEDV
Sbjct: 63  EAEIIKEDGAHKDEDV 78

[Close]

BLAST of CSPI06G13190 vs. ExPASy TrEMBL
Match: A0A3S3NPR5 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinnamomum micranthum f. kanehirae OX=337451 GN=CKAN_00102500 PE=4 SV=1)

HSP 1 Score: 106.3 bits (264), Expect = 8.0e-20
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           P+ A+DL+FIH+NLRLLSRRTP+Y KGETK WDIAG+AFDS ED G LE+A  SLD+PKL
Sbjct: 544 PKRAEDLIFIHSNLRLLSRRTPQYMKGETKMWDIAGDAFDSFEDAGELEIAQLSLDEPKL 603

Query: 90  EAEIIKDDG 99
           EA +  +DG
Sbjct: 604 EAVLFSEDG 612

[Close]

BLAST of CSPI06G13190 vs. ExPASy TrEMBL
Match: A0A7J0F542 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_09g0002740 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 30 PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
          PQ A+DLVF+H+NLRLLSRR+P+Y  GETK WDIAG+ F SLED+GMLEVAN SLD+P+L
Sbjct: 3  PQRAEDLVFVHSNLRLLSRRSPQYCSGETKMWDIAGDQFGSLEDVGMLEVANLSLDEPEL 62

Query: 90 EAEIIKDDG 99
          E  +  DDG
Sbjct: 63 EVVVFTDDG 71

[Close]

BLAST of CSPI06G13190 vs. ExPASy TrEMBL
Match: A0A7J0H150 (Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0000760 PE=4 SV=1)

HSP 1 Score: 105.9 bits (263), Expect = 1.0e-19
Identity = 48/69 (69.57%), Postives = 58/69 (84.06%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQ A+DLVF+H+NLRLLSRR+P+Y  GETK WDIAG+ F SLED+GMLEVAN SLD+P+L
Sbjct: 644 PQRAEDLVFVHSNLRLLSRRSPQYCSGETKMWDIAGDQFGSLEDVGMLEVANLSLDEPEL 703

Query: 90  EAEIIKDDG 99
           E  +  DDG
Sbjct: 704 EVVVFTDDG 712

[Close]

BLAST of CSPI06G13190 vs. NCBI nr
Match: XP_031743157.1 (uncharacterized protein LOC116404561 [Cucumis sativus])

HSP 1 Score: 129.0 bits (323), Expect = 2.4e-26
Identity = 63/78 (80.77%), Postives = 71/78 (91.03%), Query Frame = 0


Query: 28  IMPQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDP 87
           I PQ A+DLVFIH+NL LLSR+TPEYSKGETK+WDIAG+A DSLED+ MLEVAN SLDDP
Sbjct: 488 ITPQRAEDLVFIHSNLHLLSRKTPEYSKGETKAWDIAGDASDSLEDVDMLEVANLSLDDP 547

Query: 88  KLEAEIIKDDGVDKDEDV 106
           +LEAEI K+DGVDKDEDV
Sbjct: 548 ELEAEITKEDGVDKDEDV 565

[Close]

BLAST of CSPI06G13190 vs. NCBI nr
Match: XP_011659731.1 (uncharacterized protein LOC105436247 [Cucumis sativus])

HSP 1 Score: 122.1 bits (305), Expect = 2.9e-24
Identity = 59/78 (75.64%), Postives = 69/78 (88.46%), Query Frame = 0


Query: 28  IMPQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDP 87
           +MPQ  +DL+FIH+NLRLLSR+TPEYSKGETK+WDI G+  DSL+D+GMLEVAN SLDDP
Sbjct: 345 MMPQRVEDLIFIHSNLRLLSRKTPEYSKGETKAWDIVGDV-DSLKDVGMLEVANLSLDDP 404

Query: 88  KLEAEIIKDDGVDKDEDV 106
           + EAEI KDD VDKDEDV
Sbjct: 405 EFEAEITKDDSVDKDEDV 421

[Close]

BLAST of CSPI06G13190 vs. NCBI nr
Match: TYK01366.1 (DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 107.5 bits (267), Expect = 7.4e-20
Identity = 54/76 (71.05%), Postives = 63/76 (82.89%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQ A+DLV IH+NL LL R+T EY KGET+SWDI  +AF+SLED+ MLEVAN SLDD +L
Sbjct: 3   PQRAEDLVSIHSNLHLLFRKTLEYLKGETRSWDIVRDAFNSLEDVDMLEVANLSLDDREL 62

Query: 90  EAEIIKDDGVDKDEDV 106
           EAEIIK+DG  KDEDV
Sbjct: 63  EAEIIKEDGAHKDEDV 78

[Close]

BLAST of CSPI06G13190 vs. NCBI nr
Match: XP_028063867.1 (uncharacterized protein LOC114267077 [Camellia sinensis])

HSP 1 Score: 107.5 bits (267), Expect = 7.4e-20
Identity = 49/74 (66.22%), Postives = 60/74 (81.08%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQ A+DLVF+H+NLRLLSRRTP+Y +GETK WDIAGN FDS +D GMLEVAN SLD+P++
Sbjct: 85  PQRAEDLVFVHSNLRLLSRRTPQYHEGETKLWDIAGNTFDSFDDAGMLEVANLSLDEPEM 144

Query: 90  EAEIIKDDGVDKDE 104
           E  +  DDG   +E
Sbjct: 145 EVVLFTDDGGANEE 158

[Close]

BLAST of CSPI06G13190 vs. NCBI nr
Match: XP_028080801.1 (uncharacterized protein LOC114282356 [Camellia sinensis])

HSP 1 Score: 106.3 bits (264), Expect = 1.6e-19
Identity = 48/74 (64.86%), Postives = 61/74 (82.43%), Query Frame = 0


Query: 30  PQCAKDLVFIHNNLRLLSRRTPEYSKGETKSWDIAGNAFDSLEDLGMLEVANFSLDDPKL 89
           PQ A+DLVF+H+NLRLLSRRTP+Y +GETK WDIAG+ FDS +D+GMLEVAN SLD+P++
Sbjct: 385 PQRAEDLVFVHSNLRLLSRRTPQYHEGETKLWDIAGDTFDSFDDVGMLEVANLSLDEPEM 444

Query: 90  EAEIIKDDGVDKDE 104
           E  +  DDG   +E
Sbjct: 445 EVVLFTDDGGANEE 458

The following BLAST results are available for this feature:

BLAST of CSPI06G13190 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G13190 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5B7AFB0	7.7e-23	68.00	Uncharacterized protein OS=Davidia involucrata OX=16924 GN=Din_023134 PE=4 SV=1	[more]
A0A5D3BT24	3.6e-20	71.05	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cucu...	[more]
A0A3S3NPR5	8.0e-20	69.57	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein OS=Cinn...	[more]
A0A7J0F542	1.0e-19	69.57	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_09g0002740 PE=4 SV=1	[more]
A0A7J0H150	1.0e-19	69.57	Uncharacterized protein OS=Actinidia rufa OX=165716 GN=Acr_26g0000760 PE=4 SV=1	[more]

BLAST of CSPI06G13190 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_031743157.1	2.4e-26	80.77	uncharacterized protein LOC116404561 [Cucumis sativus]	[more]
XP_011659731.1	2.9e-24	75.64	uncharacterized protein LOC105436247 [Cucumis sativus]	[more]
TYK01366.1	7.4e-20	71.05	DUF659 domain-containing protein/Dimer_Tnp_hAT domain-containing protein [Cucumi...	[more]
XP_028063867.1	7.4e-20	66.22	uncharacterized protein LOC114267077 [Camellia sinensis]	[more]
XP_028080801.1	1.6e-19	64.86	uncharacterized protein LOC114282356 [Camellia sinensis]	[more]

BLAST of CSPI06G13190 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32166	OSJNBA0013A04.12 PROTEIN	coord: 30..89
None	No IPR available	PANTHER	PTHR32166:SF81	HAT TRANSPOSON SUPERFAMILY PROTEIN	coord: 30..89

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G13190.1	CSPI06G13190.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046983	protein dimerization activity