
CSPI06G13040 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATACAGCAAAAAAAGTGGGGAACAAGGTGGAGTTTGTTTTGAGAAGGTTATTTGGTGAATATTCTTTAAAGTATCATAGCCATGAACCATCTCAACTTCAAGTGTTTAAGCATTGTACAGGTATGAGTCAACCTTCAGTTTGCAGTAGTAGTAGAACTACTTCTTCCACTACATCTACAACTTCTTCTTCCACTTCAGACGTTTTTCGTATCCACTTTGAAGATACATATGAAGAGGATGTCCTAAGTGTGAATACAGAAGTTGATATTTACTTATTGGAGCATCATATTGCATGTGAGAATAACTTTGATATCTTAGAGTGGTGGAAAGAAAATTCTTCAAGATATAAGGTTTTTAGTCAAATCGCAAGAGATATTTTAGCAATTTTGGTATCCACAGTTGCTTCTGAGTCTGCATTCAGTACTAGTGGCAGAGTGATTGATATGTTTCGTTCCACTTTAGCTCCAACCACAGTTGAGGCACTCGTACGTGCACAAAATTGGCTACATTCAAAAGTAGCTAATATTGAATTTGTTGATCTTAAAAAATATTTGGAGGACATTGCAATGGTTGAAAAAGGTTCGTATATGTAGAGCATTATTTCTAATTAATTTGCTTACTTCAAAATTCAAATATATTGATTATGTCATTACTATGTTAGTAATAAGATTTTTTTAGACTTCAAAGCGGGTATAGAGGCAAAAACCAAGGAGATGAACGAGAAGGAGAAGAACGTAAAAGAGAAGTTGTCTTGA ATGGATACAGCAAAAAAAGTGGGGAACAAGGTGGAGTTTGTTTTGAGAAGGTTATTTGGTGAATATTCTTTAAAGTATCATAGCCATGAACCATCTCAACTTCAAGTGTTTAAGCATTGTACAGGTATGAGTCAACCTTCAGTTTGCAGTAGTAGTAGAACTACTTCTTCCACTACATCTACAACTTCTTCTTCCACTTCAGACGTTTTTCGTATCCACTTTGAAGATACATATGAAGAGGATGTCCTAAGTGTGAATACAGAAGTTGATATTTACTTATTGGAGCATCATATTGCATGTGAGAATAACTTTGATATCTTAGAGTGGTGGAAAGAAAATTCTTCAAGATATAAGGTTTTTAGTCAAATCGCAAGAGATATTTTAGCAATTTTGGTATCCACAGTTGCTTCTGAGTCTGCATTCAGTACTAGTGGCAGAGTGATTGATATGTTTCGTTCCACTTTAGCTCCAACCACAGTTGAGGCACTCGTACGTGCACAAAATTGGCTACATTCAAAAGTAGCTAATATTGAATTTGTTGATCTTAAAAAATATTTGGAGGACATTGCAATGGTTGAAAAAGACTTCAAAGCGGGTATAGAGGCAAAAACCAAGGAGATGAACGAGAAGGAGAAGAACGTAAAAGAGAAGTTGTCTTGA ATGGATACAGCAAAAAAAGTGGGGAACAAGGTGGAGTTTGTTTTGAGAAGGTTATTTGGTGAATATTCTTTAAAGTATCATAGCCATGAACCATCTCAACTTCAAGTGTTTAAGCATTGTACAGGTATGAGTCAACCTTCAGTTTGCAGTAGTAGTAGAACTACTTCTTCCACTACATCTACAACTTCTTCTTCCACTTCAGACGTTTTTCGTATCCACTTTGAAGATACATATGAAGAGGATGTCCTAAGTGTGAATACAGAAGTTGATATTTACTTATTGGAGCATCATATTGCATGTGAGAATAACTTTGATATCTTAGAGTGGTGGAAAGAAAATTCTTCAAGATATAAGGTTTTTAGTCAAATCGCAAGAGATATTTTAGCAATTTTGGTATCCACAGTTGCTTCTGAGTCTGCATTCAGTACTAGTGGCAGAGTGATTGATATGTTTCGTTCCACTTTAGCTCCAACCACAGTTGAGGCACTCGTACGTGCACAAAATTGGCTACATTCAAAAGTAGCTAATATTGAATTTGTTGATCTTAAAAAATATTTGGAGGACATTGCAATGGTTGAAAAAGACTTCAAAGCGGGTATAGAGGCAAAAACCAAGGAGATGAACGAGAAGGAGAAGAACGTAAAAGAGAAGTTGTCTTGA MDTAKKVGNKVEFVLRRLFGEYSLKYHSHEPSQLQVFKHCTGMSQPSVCSSSRTTSSTTSTTSSSTSDVFRIHFEDTYEEDVLSVNTEVDIYLLEHHIACENNFDILEWWKENSSRYKVFSQIARDILAILVSTVASESAFSTSGRVIDMFRSTLAPTTVEALVRAQNWLHSKVANIEFVDLKKYLEDIAMVEKDFKAGIEAKTKEMNEKEKNVKEKLS* Homology
BLAST of CSPI06G13040 vs. ExPASy Swiss-Prot
Match: P08770 (Putative AC transposase OS=Zea mays OX=4577 PE=2 SV=2) HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy Swiss-Prot
Match: P03010 (Putative AC9 transposase OS=Zea mays OX=4577 PE=4 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.8e-16 Identity = 55/162 (33.95%), Postives = 92/162 (56.79%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy Swiss-Prot
Match: Q75HY5 (Zinc finger BED domain-containing protein RICESLEEPER 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0583200 PE=2 SV=1) HSP 1 Score: 70.5 bits (171), Expect = 2.7e-11 Identity = 40/96 (41.67%), Postives = 62/96 (64.58%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy Swiss-Prot
Match: Q9M2N5 (Zinc finger BED domain-containing protein DAYSLEEPER OS=Arabidopsis thaliana OX=3702 GN=HAT PE=1 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.0e-10 Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy Swiss-Prot
Match: Q0JMB2 (Zinc finger BED domain-containing protein RICESLEEPER 4 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0518400 PE=2 SV=3) HSP 1 Score: 63.5 bits (153), Expect = 3.3e-09 Identity = 41/119 (34.45%), Postives = 71/119 (59.66%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy TrEMBL
Match: A0A6J1DFJ0 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1) HSP 1 Score: 131.7 bits (330), Expect = 3.7e-27 Identity = 87/203 (42.86%), Postives = 123/203 (60.59%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy TrEMBL
Match: A0A6J1DE80 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 OS=Momordica charantia OX=3673 GN=LOC111019973 PE=4 SV=1) HSP 1 Score: 131.0 bits (328), Expect = 6.3e-27 Identity = 87/198 (43.94%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy TrEMBL
Match: A0A5D3CR68 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold84G001050 PE=4 SV=1) HSP 1 Score: 127.9 bits (320), Expect = 5.3e-26 Identity = 91/224 (40.62%), Postives = 120/224 (53.57%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy TrEMBL
Match: A0A5D3CXI1 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold21G004160 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.1e-26 Identity = 91/224 (40.62%), Postives = 120/224 (53.57%), Query Frame = 0
BLAST of CSPI06G13040 vs. ExPASy TrEMBL
Match: A0A5D3DAN8 (Zinc finger BED domain-containing protein RICESLEEPER 3-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold237G001750 PE=4 SV=1) HSP 1 Score: 127.1 bits (318), Expect = 9.1e-26 Identity = 91/224 (40.62%), Postives = 120/224 (53.57%), Query Frame = 0
BLAST of CSPI06G13040 vs. NCBI nr
Match: XP_038877573.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]) HSP 1 Score: 159.5 bits (402), Expect = 3.4e-35 Identity = 99/213 (46.48%), Postives = 134/213 (62.91%), Query Frame = 0
BLAST of CSPI06G13040 vs. NCBI nr
Match: XP_038890289.1 (zinc finger BED domain-containing protein RICESLEEPER 1-like [Benincasa hispida]) HSP 1 Score: 139.4 bits (350), Expect = 3.6e-29 Identity = 85/189 (44.97%), Postives = 111/189 (58.73%), Query Frame = 0
BLAST of CSPI06G13040 vs. NCBI nr
Match: XP_038895827.1 (zinc finger BED domain-containing protein RICESLEEPER 2-like [Benincasa hispida]) HSP 1 Score: 136.7 bits (343), Expect = 2.4e-28 Identity = 83/158 (52.53%), Postives = 105/158 (66.46%), Query Frame = 0
BLAST of CSPI06G13040 vs. NCBI nr
Match: XP_022152197.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X1 [Momordica charantia]) HSP 1 Score: 131.7 bits (330), Expect = 7.6e-27 Identity = 87/203 (42.86%), Postives = 123/203 (60.59%), Query Frame = 0
BLAST of CSPI06G13040 vs. NCBI nr
Match: XP_022152198.1 (zinc finger BED domain-containing protein DAYSLEEPER-like isoform X2 [Momordica charantia]) HSP 1 Score: 131.0 bits (328), Expect = 1.3e-26 Identity = 87/198 (43.94%), Postives = 121/198 (61.11%), Query Frame = 0
BLAST of CSPI06G13040 vs. TAIR 10
Match: AT3G42170.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 68.6 bits (166), Expect = 7.4e-12 Identity = 51/161 (31.68%), Postives = 80/161 (49.69%), Query Frame = 0
BLAST of CSPI06G13040 vs. TAIR 10
Match: AT1G18560.1 (BED zinc finger ;hAT family dimerisation domain ) HSP 1 Score: 55.8 bits (133), Expect = 4.9e-08 Identity = 34/119 (28.57%), Postives = 60/119 (50.42%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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