CSPI06G11690 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G11690
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	transcription factor TCP7
Location	Chr6: 10343781 .. 10345280 (-)
RNA-Seq Expression	CSPI06G11690
Synteny	CSPI06G11690

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCGGATTTTTTAAGAAATGCATTAACATAAAACAATTATAAATCTTTTGATTATCGCTAGCACGTGCGCTCACACACACGCATATGCCGATTTATATATAAACCCTAAAAGGACAGTTGATTTGATCATAATGTATTTGGAATACTTCTCTAAAAGGAATCATGGGTTCAAAAAACATGAGAGTAAAAAGGCCTACATCTAACTCTCCAAGGAATGCACCAAAACCCAATTCACCAATTGCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCATGGGCGGGATCGACGTATCCGCCTTCCACCATTGTGTGCTGCTCGTGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACGGTAGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCCTTAACTGGTAAAAATATTGCTTCTGCTACTCTAGATTTGCCTGGCTGCAGCAAGCCTTGTGATCCATCTTCATCAAACACTAATTCTACTACTACAAGTTATTTTGAAGAAGAAGCCCTTGGTGGAAACAACTATGCATTCCCAATGGTTAATGAATGCATACCTTTGCCAAACTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATTGCTACACTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAACCGAGGATGACGATGACTGAAGATTTAGATTAATGGCAGTTTATGACATGTAATCGAAATAAATAATGGTATCTCTCTCTATATGGCCAAGATGATAGATATGGAGAAGTATGAACGTTATATTTGCAAGTGAAAAAGGAAAGTAACTAATAATCAAAGAATGAAAGAAAACTTGTTATGTTCTTTGTTAAAAAAGGAAGAGAATTCAATTTATAGGCAGCGGAGCCATTTTGGTCGATGCCTAACCGTCCAAAATCATATAATTGCTTGCCTGTCCTTATATGGCCTTACAACACTTGCAAATTTACCAAGAACTTGTTCCATAACTTCTTCCATCTTCGTCTACGACTGTATGTTGAAGCCACATTCGTCTTGAATGCTAACTAGTACATTAGAGTCTCAAGGTGCAAGCAAAAACTGCTAGTTATGGTATTATCCTTATTCTTTTCGATATACCATGTTCTTTATGATTTTTTTCAATGATATCATCCTTATAACACTCTTATGGATCCAATTAGGAGAGAAATGTCCATACAACTTAGTGAAGACTGTTATTAGTAATATCTGAAAAATTGCTGTGTGCCGTCATTCCAGATGCTCGTTTTGAAGCATCCACCATCTATTGTTCCTTGTCTCAAACATGGGTACATCTGGAGAAAACCACATAATGCACAAAGTTCTATTGGCTTTACAAACAGTGTCGTACACGAGAAAGAGTCAAATTTCCATACAGATATAATCTTAAGAGTTAACAAATACCTGCAAGAATTACAAAACTTGTAAGATTGGCCTTATCC

mRNA sequence

CTCGGATTTTTTAAGAAATGCATTAACATAAAACAATTATAAATCTTTTGATTATCGCTAGCACGTGCGCTCACACACACGCATATGCCGATTTATATATAAACCCTAAAAGGACAGTTGATTTGATCATAATGTATTTGGAATACTTCTCTAAAAGGAATCATGGGTTCAAAAAACATGAGAGTAAAAAGGCCTACATCTAACTCTCCAAGGAATGCACCAAAACCCAATTCACCAATTGCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCATGGGCGGGATCGACGTATCCGCCTTCCACCATTGTGTGCTGCTCGTGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACGGTAGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCCTTAACTGGTAAAAATATTGCTTCTGCTACTCTAGATTTGCCTGGCTGCAGCAAGCCTTGTGATCCATCTTCATCAAACACTAATTCTACTACTACAAGTTATTTTGAAGAAGAAGCCCTTGGTGGAAACAACTATGCATTCCCAATGGTTAATGAATGCATACCTTTGCCAAACTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATTGCTACACTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAACCGAGGATGACGATGACTGAAGATTTAGATTAATGGCAGTTTATGACATGTAATCGAAATAAATAATGGTATCTCTCTCTATATGGCCAAGATGATAGATATGGAGAAGTATGAACGTTATATTTGCAAGTGAAAAAGGAAAGTAACTAATAATCAAAGAATGAAAGAAAACTTGTTATGTTCTTTGTTAAAAAAGGAAGAGAATTCAATTTATAGGCAGCGGAGCCATTTTGGTCGATGCCTAACCGTCCAAAATCATATAATTGCTTGCCTGTCCTTATATGGCCTTACAACACTTGCAAATTTACCAAGAACTTGTTCCATAACTTCTTCCATCTTCGTCTACGACTGTATGTTGAAGCCACATTCGTCTTGAATGCTAACTAGTACATTAGAGTCTCAAGGTGCAAGCAAAAACTGCTAGTTATGGTATTATCCTTATTCTTTTCGATATACCATGTTCTTTATGATTTTTTTCAATGATATCATCCTTATAACACTCTTATGGATCCAATTAGGAGAGAAATGTCCATACAACTTAGTGAAGACTGTTATTAGTAATATCTGAAAAATTGCTGTGTGCCGTCATTCCAGATGCTCGTTTTGAAGCATCCACCATCTATTGTTCCTTGTCTCAAACATGGGTACATCTGGAGAAAACCACATAATGCACAAAGTTCTATTGGCTTTACAAACAGTGTCGTACACGAGAAAGAGTCAAATTTCCATACAGATATAATCTTAAGAGTTAACAAATACCTGCAAGAATTACAAAACTTGTAAGATTGGCCTTATCC

Coding sequence (CDS)

ATGGGTTCAAAAAACATGAGAGTAAAAAGGCCTACATCTAACTCTCCAAGGAATGCACCAAAACCCAATTCACCAATTGCCTCAGAGTCTAAGCTCATCCCTTCCAAAGCTCCAAAAGATCGCCATGCCAAGGTTCATGGGCGGGATCGACGTATCCGCCTTCCACCATTGTGTGCTGCTCGTGTGTTTCAGCTAACTCGTGAGCTCGGAAACAAAACAGATGGTCAGACGGTAGAGTGGCTGTTGAAGAAGGCTGAGCCATCCATTATTGCCTTAACTGGTAAAAATATTGCTTCTGCTACTCTAGATTTGCCTGGCTGCAGCAAGCCTTGTGATCCATCTTCATCAAACACTAATTCTACTACTACAAGTTATTTTGAAGAAGAAGCCCTTGGTGGAAACAACTATGCATTCCCAATGGTTAATGAATGCATACCTTTGCCAAACTATGAATTCGATTTGGTCTCGGATTTTGATATGGAACTTTTTGCTCATCACATTGCTACACTTCAAGAAGTGGCAGAAAACTCTGAGCAAGAAACCGAGGATGACGATGACTGA

Protein sequence

MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNSTTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQETEDDDD*

Homology

[Close]

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot
Match: Q9FMX2 (Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1)

HSP 1 Score: 101.3 bits (251), Expect = 1.2e-20
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 26  IASESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKK 85
           I  +  ++  K P KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++
Sbjct: 26  IEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQ 85

Query: 86  AEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNSTTTSYFEEEALGGNN 136
           AEPSIIA TG     A+      S         TNST+  +     LGG +
Sbjct: 86  AEPSIIAATGTGTTPASFSTASVS-----IRGATNSTSLDHKPTSLLGGTS 131

[Close]

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot
Match: Q9LSD5 (Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 1.4e-19
Identity = 47/82 (57.32%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 21  KPNSPIASESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVE 80
           +PN    ++++L P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++
Sbjct: 60  EPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQ 119

Query: 81  WLLKKAEPSIIALTGKNIASAT 102
           WLL++AEPSIIA TG     A+
Sbjct: 120 WLLQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot
Match: Q53PH2 (Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 SV=1)

HSP 1 Score: 96.3 bits (238), Expect = 3.9e-19
Identity = 47/78 (60.26%), Postives = 58/78 (74.36%), Query Frame = 0


Query: 24  SPIASESKLI-------PSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQ 83
           +P+AS  K           +  KDRH KV GR RRIR+P LCAARVFQLTRELG+KTDG+
Sbjct: 131 APVASSEKKAVVAAGAGAKRPTKDRHTKVEGRGRRIRMPALCAARVFQLTRELGHKTDGE 190

Query: 84  TVEWLLKKAEPSIIALTG 95
           T+EWLL++AEP+I+A TG
Sbjct: 191 TIEWLLQQAEPAIVAATG 208

[Close]

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot
Match: O23875 (Transcription factor PCF1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF1 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.8e-19
Identity = 47/81 (58.02%), Postives = 63/81 (77.78%), Query Frame = 0


Query: 19  APKPNSPIASESKLIPSKAP--KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQ 78
           A  P+S  A+  ++ P K+P   DRH+KV GR RR+R+P + AARVFQLTRELG++TDG+
Sbjct: 35  AEPPSSDGATPRRVRPRKSPSSSDRHSKVAGRGRRVRIPAMVAARVFQLTRELGHRTDGE 94

Query: 79  TVEWLLKKAEPSIIALTGKNI 98
           T+EWLL++AEPSIIA TG  +
Sbjct: 95  TIEWLLRQAEPSIIAATGTGV 115

[Close]

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot
Match: Q9C518 (Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1)

HSP 1 Score: 95.1 bits (235), Expect = 8.8e-19
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 2   GSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPS----KAPKDRHAKVHGRDRRIRLPPL 61
           G     V    S  PR+ P  +S +A+ S    +    ++ KDRH KV GR RRIR+P L
Sbjct: 20  GGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPAL 79

Query: 62  CAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK-------NIASATLDLPGCSKP 121
           CAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG        +  S +L   G +  
Sbjct: 80  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLS 139

Query: 122 CDPSSS----NTNSTTTSYFEEEALGG 134
             PS S         T   ++E+  GG
Sbjct: 140 APPSKSVPLYGALGLTHHQYDEQGGGG 166

[Close]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL
Match: A0A0A0KDC7 (TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV=1)

HSP 1 Score: 367.5 bits (942), Expect = 3.4e-98
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSK+MRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTSYFEEE LGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 TEDDDD 187
           TEDDDD
Sbjct: 181 TEDDDD 186

[Close]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL
Match: A0A5A7T0X8 (Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold173G00200 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.6e-94
Identity = 179/186 (96.24%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVK+PTSNSPRNAPK NSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKP DPSSSN NS
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTSYFEEE LGGNNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 TEDDDD 187
           TED DD
Sbjct: 181 TEDGDD 186

[Close]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL
Match: A0A1S3CNQ2 (transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1)

HSP 1 Score: 352.8 bits (904), Expect = 8.6e-94
Identity = 179/186 (96.24%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVK+PTSNSPRNAPK NSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKP DPSSSN NS
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTSYFEEE LGGNNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 TEDDDD 187
           TED DD
Sbjct: 181 TEDGDD 186

[Close]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL
Match: A0A6J1K5P6 (transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4 SV=1)

HSP 1 Score: 266.9 bits (681), Expect = 6.2e-68
Identity = 145/185 (78.38%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVK+ TSNSPR  P      ASESK IPSKA KDRHAKV GRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKATSNSPRGVPN-----ASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA  +L GC KP DPSSS T +
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGC-KPTDPSSSTTTT 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TT   F+     GNNYAFP V+E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E
Sbjct: 121 TTAKTFD-----GNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSERE 174

Query: 181 TEDDD 186
            EDDD
Sbjct: 181 AEDDD 174

[Close]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL
Match: A0A6J1CGC4 (transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 PE=4 SV=1)

HSP 1 Score: 262.7 bits (670), Expect = 1.2e-66
Identity = 147/188 (78.19%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPK--PNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVK+ TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNT 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120

Query: 121 NSTTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180
            S TTS F++E    NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E
Sbjct: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLE 180

Query: 181 QETEDDDD 187
           Q+   D D
Sbjct: 181 QDDGQDSD 180

[Close]

BLAST of CSPI06G11690 vs. NCBI nr
Match: XP_004145813.1 (transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa_020689 [Cucumis sativus])

HSP 1 Score: 367.5 bits (942), Expect = 7.0e-98
Identity = 184/186 (98.92%), Postives = 185/186 (99.46%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSK+MRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKHMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTSYFEEE LGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 TEDDDD 187
           TEDDDD
Sbjct: 181 TEDDDD 186

[Close]

BLAST of CSPI06G11690 vs. NCBI nr
Match: XP_008465370.1 (PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription factor TCP7 [Cucumis melo var. makuwa] >TYK22396.1 transcription factor TCP7 [Cucumis melo var. makuwa])

HSP 1 Score: 352.8 bits (904), Expect = 1.8e-93
Identity = 179/186 (96.24%), Postives = 180/186 (96.77%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVK+PTSNSPRNAPK NSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKPTSNSPRNAPKLNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKP DPSSSN NS
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPFDPSSSNINS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTTSYFEEE LGGNNYAFP VNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE
Sbjct: 121 TTTSYFEEETLGGNNYAFPTVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180

Query: 181 TEDDDD 187
           TED DD
Sbjct: 181 TEDGDD 186

[Close]

BLAST of CSPI06G11690 vs. NCBI nr
Match: XP_038900506.1 (transcription factor TCP16-like [Benincasa hispida])

HSP 1 Score: 323.2 bits (827), Expect = 1.5e-84
Identity = 167/186 (89.78%), Postives = 174/186 (93.55%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNM+VK+ TSNSPRNAPKPNSP ASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA
Sbjct: 1   MGSKNMKVKKATSNSPRNAPKPNSPNASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK+IASATLDLPGC KP DPSSS+  S
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKDIASATLDLPGC-KPFDPSSSSNLS 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TTT++F EE   GNNYAFPM NECIPLPNYEFDLVSDFDMELFAHHIA LQEVAENSE+E
Sbjct: 121 TTTNFF-EETFDGNNYAFPMANECIPLPNYEFDLVSDFDMELFAHHIAMLQEVAENSERE 180

Query: 181 TEDDDD 187
           TEDDDD
Sbjct: 181 TEDDDD 184

[Close]

BLAST of CSPI06G11690 vs. NCBI nr
Match: XP_022996075.1 (transcription factor TCP14-like [Cucurbita maxima])

HSP 1 Score: 266.9 bits (681), Expect = 1.3e-67
Identity = 145/185 (78.38%), Postives = 154/185 (83.24%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAA 60
           MGSKNMRVK+ TSNSPR  P      ASESK IPSKA KDRHAKV GRDRRIRLPPLCAA
Sbjct: 1   MGSKNMRVKKATSNSPRGVPN-----ASESKPIPSKALKDRHAKVQGRDRRIRLPPLCAA 60

Query: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNS 120
           RVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA  +L GC KP DPSSS T +
Sbjct: 61  RVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAAPELHGC-KPTDPSSSTTTT 120

Query: 121 TTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSEQE 180
           TT   F+     GNNYAFP V+E +PLPNYEFDLVSDFDMELFAHHI TLQEVAENSE+E
Sbjct: 121 TTAKTFD-----GNNYAFPTVDEQVPLPNYEFDLVSDFDMELFAHHINTLQEVAENSERE 174

Query: 181 TEDDD 186
            EDDD
Sbjct: 181 AEDDD 174

[Close]

BLAST of CSPI06G11690 vs. NCBI nr
Match: XP_022140679.1 (transcription factor TCP15-like [Momordica charantia])

HSP 1 Score: 262.7 bits (670), Expect = 2.4e-66
Identity = 147/188 (78.19%), Postives = 157/188 (83.51%), Query Frame = 0


Query: 1   MGSKNMRVKRPTSNSPRNAPK--PNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLC 60
           MGSKNMRVK+ TS+SPRNAPK   NSP ASESK +PSKAPKDRHAKVHGRDRRIRLPPLC
Sbjct: 1   MGSKNMRVKKATSSSPRNAPKSNSNSPNASESKPLPSKAPKDRHAKVHGRDRRIRLPPLC 60

Query: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGKNIASATLDLPGCSKPCDPSSSNT 120
           AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIA+TGK+IASA L+L  C+    PSSSN 
Sbjct: 61  AARVFQLTRELGNKTDGQTVEWLLKKAEPSIIAITGKDIASAALNLAACNP--SPSSSNL 120

Query: 121 NSTTTSYFEEEALGGNNYAFPMVNECIPLPNYEFDLVSDFDMELFAHHIATLQEVAENSE 180
            S TTS F++E    NNY FPM N  IPLPNYEFDLVSDFDMELFAHHI TLQEVAEN E
Sbjct: 121 -SATTSCFQQET---NNYTFPMPN--IPLPNYEFDLVSDFDMELFAHHITTLQEVAENLE 180

Query: 181 QETEDDDD 187
           Q+   D D
Sbjct: 181 QDDGQDSD 180

[Close]

BLAST of CSPI06G11690 vs. TAIR 10
Match: AT5G23280.1 (TCP family transcription factor )

HSP 1 Score: 101.3 bits (251), Expect = 8.7e-22
Identity = 56/111 (50.45%), Postives = 71/111 (63.96%), Query Frame = 0


Query: 26  IASESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKK 85
           I  +  ++  K P KDRH+KV GR RRIR+P +CAARVFQLTRELG+K+DGQT+EWLL++
Sbjct: 26  IEQQPSVVVKKPPAKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQ 85

Query: 86  AEPSIIALTGKNIASATLDLPGCSKPCDPSSSNTNSTTTSYFEEEALGGNN 136
           AEPSIIA TG     A+      S         TNST+  +     LGG +
Sbjct: 86  AEPSIIAATGTGTTPASFSTASVS-----IRGATNSTSLDHKPTSLLGGTS 131

[Close]

BLAST of CSPI06G11690 vs. TAIR 10
Match: AT3G27010.1 (TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20 )

HSP 1 Score: 97.8 bits (242), Expect = 9.6e-21
Identity = 47/82 (57.32%), Postives = 64/82 (78.05%), Query Frame = 0


Query: 21  KPNSPIASESKLIPSKAP-KDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVE 80
           +PN    ++++L P ++  KDRH KV GR RRIR+P LCAAR+FQLTRELG+K+DG+T++
Sbjct: 60  EPNKKSQNQNQLGPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQ 119

Query: 81  WLLKKAEPSIIALTGKNIASAT 102
           WLL++AEPSIIA TG     A+
Sbjct: 120 WLLQQAEPSIIAATGSGTIPAS 141

[Close]

BLAST of CSPI06G11690 vs. TAIR 10
Match: AT1G58100.1 (TCP family transcription factor )

HSP 1 Score: 95.1 bits (235), Expect = 6.2e-20
Identity = 61/147 (41.50%), Postives = 83/147 (56.46%), Query Frame = 0


Query: 2   GSKNMRVKRPTSNSPRNAPKPNSPIASESKLIPS----KAPKDRHAKVHGRDRRIRLPPL 61
           G     V    S  PR+ P  +S +A+ S    +    ++ KDRH KV GR RRIR+P L
Sbjct: 20  GGARQLVDASLSIVPRSTPPEDSTLATTSSTATATTTKRSTKDRHTKVDGRGRRIRMPAL 79

Query: 62  CAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTGK-------NIASATLDLPGCSKP 121
           CAARVFQLTRELG+K+DG+T+EWLL++AEP+I+A TG        +  S +L   G +  
Sbjct: 80  CAARVFQLTRELGHKSDGETIEWLLQQAEPAIVAATGTGTIPANFSTLSVSLRSSGSTLS 139

Query: 122 CDPSSS----NTNSTTTSYFEEEALGG 134
             PS S         T   ++E+  GG
Sbjct: 140 APPSKSVPLYGALGLTHHQYDEQGGGG 166

[Close]

BLAST of CSPI06G11690 vs. TAIR 10
Match: AT1G69690.1 (TCP family transcription factor )

HSP 1 Score: 94.7 bits (234), Expect = 8.2e-20
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 0


Query: 12  TSNSPRNAPKPNSPIASESKLIPSKAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGN 71
           T++ P + PK   P  + +        KDRH KV GR RRIR+P +CAARVFQLTRELG+
Sbjct: 34  TTSEPNSEPKKPPPKRTST--------KDRHTKVEGRGRRIRMPAMCAARVFQLTRELGH 93

Query: 72  KTDGQTVEWLLKKAEPSIIALTGKNIASA---TLDLPGCSKPCDPSSSNTNSTTTSYF 127
           K+DG+T+EWLL++AEP++IA TG     A   +L++   S     S+++  +T +SY+
Sbjct: 94  KSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSRSSLSAAHLRTTPSSYY 143

[Close]

BLAST of CSPI06G11690 vs. TAIR 10
Match: AT1G72010.1 (TCP family transcription factor )

HSP 1 Score: 94.4 bits (233), Expect = 1.1e-19
Identity = 43/59 (72.88%), Postives = 52/59 (88.14%), Query Frame = 0


Query: 36  KAPKDRHAKVHGRDRRIRLPPLCAARVFQLTRELGNKTDGQTVEWLLKKAEPSIIALTG 95
           K  KDRH KV GR RRIR+P +CAARVFQLTRELG+K+DG+T+EWLL++AEP+IIA TG
Sbjct: 61  KPTKDRHTKVDGRGRRIRMPAMCAARVFQLTRELGHKSDGETIEWLLQQAEPAIIASTG 119

The following BLAST results are available for this feature:

BLAST of CSPI06G11690 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FMX2	1.2e-20	50.45	Transcription factor TCP7 OS=Arabidopsis thaliana OX=3702 GN=TCP7 PE=1 SV=1	[more]
Q9LSD5	1.4e-19	57.32	Transcription factor TCP20 OS=Arabidopsis thaliana OX=3702 GN=TCP20 PE=1 SV=1	[more]
Q53PH2	3.9e-19	60.26	Transcription factor PCF3 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF3 PE=2 ...	[more]
O23875	8.8e-19	58.02	Transcription factor PCF1 OS=Oryza sativa subsp. japonica OX=39947 GN=PCF1 PE=1 ...	[more]
Q9C518	8.8e-19	41.50	Transcription factor TCP8 OS=Arabidopsis thaliana OX=3702 GN=TCP8 PE=1 SV=1	[more]

BLAST of CSPI06G11690 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDC7	3.4e-98	98.92	TCP domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G147520 PE=4 SV...	[more]
A0A5A7T0X8	8.6e-94	96.24	Transcription factor TCP7 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A1S3CNQ2	8.6e-94	96.24	transcription factor TCP7 OS=Cucumis melo OX=3656 GN=LOC103503003 PE=4 SV=1	[more]
A0A6J1K5P6	6.2e-68	78.38	transcription factor TCP14-like OS=Cucurbita maxima OX=3661 GN=LOC111491390 PE=4...	[more]
A0A6J1CGC4	1.2e-66	78.19	transcription factor TCP15-like OS=Momordica charantia OX=3673 GN=LOC111011281 P...	[more]

BLAST of CSPI06G11690 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004145813.1	7.0e-98	98.92	transcription factor TCP7 [Cucumis sativus] >KGN46859.1 hypothetical protein Csa...	[more]
XP_008465370.1	1.8e-93	96.24	PREDICTED: transcription factor TCP7 [Cucumis melo] >KAA0035241.1 transcription ...	[more]
XP_038900506.1	1.5e-84	89.78	transcription factor TCP16-like [Benincasa hispida]	[more]
XP_022996075.1	1.3e-67	78.38	transcription factor TCP14-like [Cucurbita maxima]	[more]
XP_022140679.1	2.4e-66	78.19	transcription factor TCP15-like [Momordica charantia]	[more]

BLAST of CSPI06G11690 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G23280.1	8.7e-22	50.45	TCP family transcription factor	[more]
AT3G27010.1	9.6e-21	57.32	TEOSINTE BRANCHED 1, cycloidea, PCF (TCP)-domain family protein 20	[more]
AT1G58100.1	6.2e-20	41.50	TCP family transcription factor	[more]
AT1G69690.1	8.2e-20	44.92	TCP family transcription factor	[more]
AT1G72010.1	1.1e-19	72.88	TCP family transcription factor	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR017887	Transcription factor TCP subgroup	PFAM	PF03634	TCP	coord: 38..132 e-value: 5.2E-27 score: 95.3
IPR017887	Transcription factor TCP subgroup	PROSITE	PS51369	TCP	coord: 38..92 score: 25.429598
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..50
None	No IPR available	PANTHER	PTHR31072:SF123	TRANSCRIPTION FACTOR PCF1-LIKE	coord: 20..184
IPR005333	Transcription factor, TCP	PANTHER	PTHR31072	TRANSCRIPTION FACTOR TCP4-RELATED	coord: 20..184

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G11690.1	CSPI06G11690.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
cellular_component	GO:0005634	nucleus
molecular_function	GO:0003700	DNA-binding transcription factor activity
molecular_function	GO:0043565	sequence-specific DNA binding