CSPI06G10880 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G10880
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	UPF0678 fatty acid-binding protein-like protein
Location	Chr6: 9488477 .. 9492853 (+)
RNA-Seq Expression	CSPI06G10880
Synteny	CSPI06G10880

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CAAATTACTCTTTTAGAGAAATAAAAATTTCGTTTACGAGGGAAGGACAAGGTGTATTTGTTGTGTACTCCGCCGGTAAGAAACTAAAAACACTAACACAAACGCGAACGAGTGAAAACAGCCATAGAAATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTCTCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCAATTCTCCCATTCTGGCAAGGTAACCGTCAACTCCCTGTTCTTCGTCTCTATTCATTATCGTCGTTGATATCATCTTAATATAATTAAAATCGTCCCACTTCACTCGATTGGATTTTGCTTATTTAGTCTAATCGGTTATCTTCCTTGTTTGGGGATTTTTTAATACGATGATGATGGGAGAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGGTCAACCATCTCTATCTCTCCTTCTTGTGTGGTTTACTGTTACATTCAAATTCATCGGCCGGAAGAGAATTTTTGTTGAATATAGACGTGCTTGTGTTTTTCGATTTTGATTTAGAGAAGTAATGATCGAAACAAACGGGTTCTTTGAGATGATATAAAAAGGCTTTATACTCTGTGAGCTCTAACAATATAATCAATCAGGTCCTGTCTGCTGAAACAAAACCTCCCTTTTGCCCTCACTTGGCCCTGTCTTTCCCGCCAAAACGAACGGCCATCTTTTCTAACCGTTGAAATCTCAGTCGCCATCTTTGAAATTGCAACGATTTGATTTCTTCAATCTCGACTTACTCCATGGCCCTAAAGCTCAGATTCTGAAACTACACTGCCACTATCAACTGTATCGTCAATTGCTATGTCAGATTCAGCAAGAGTTGTAGCCGCACATCAACTGTTCGATGAAATGCCCAACATAAATGTTGTGTCACGGATCTCACTCATGGCAGGTTATGTTGAGATTGTGGCTGGTATTGTTCATTCACAGTTCAGGCGGTGTCGAGAAGTTCAATTGTTTTCGAAGACTCCACTTTTGCAGCTGCAACCGAGGCCTGTTTGAAAAGTTCCGTGCCTATGTTAAGATTTTTGGCTATGGAGCTAATGTTATGGTCTGTTCCTCTCGCTTCTTGATACGTATGGGAAGTGTGTAACGATGTTGAAGCTAGGAGAGTCTTCGATTCCATGTTGTGTAAGATTATTGTTTTGATTCCATGTCGTGTTCCAGTTGCAATCAACACAAGCTTCTTCTCGCATCGCCAGGCTTCAGCGCGATCTAGCCTCAAACGCAACCTTTTTCGCGTAACGTCTCTTCTACATAGCTAAAATAAACCTTTCAACAAAGCTTCTTCCTTTTCTGGATCTGGGTCCTACAAATCATGTACTAAAAACGTTGGTATTTCATTTGAAAGTGAGCTTTATGGATAGATTATATGGTTGAAGTGGATAGGTGTGAAATGAAATTAATCATCGTGAGTTGACCTAGTTTAGTTGCTCATTAAGGGACATGGGTGTGACATGGCTAGAGCTTTAGCGGGAATGAATTCAAATGTATGGCGGTCAACTATTTAGGATTTAATATTCTACGAGCTTCCCTGACACCTAAATTTTATAAGATTAGACTGGTTTTCACATAAGAGTAGTCGAGATATAGCCAAGGTACCTCAATCACTCATGGAGATGGAAAAAAAAGTGAAATGAAACAAAGCTCCTCAAATCCCTCCTCCATATGAATGTGTGAAACTTGATCAAACTACAAGTGCTATTTTGTCCGCCTTTTATCTGCGATCTTCTTGAGTTGATATTTTTAATTGTGGTATGGATCTAATAGCTTGTGATGTAGGTGCAGATTGCCTTTCTTTGCTGCATGCATACTCTTCACACAACCAGAATGGTGAAACTGATAAGAAGCGAAATAAGACGCATCATTACAAAATTATATGGAGGTTTTCTAAGTGGGGTTGAACTTAAAATAAATCAGCAGCAAGTTGGATGGTTAGATATGACTTTCAGATTAGGAAAGAAGAAAAATAGATTCATATTGCTGCTCACGTGAACTTTCACATTGCCATAAAAACTCTGGTTTCTATAGCCAATTTTTATTTGCTTGACATCGTAATTTTATAACCAGTACTATATTTGCATCATTATCATCAACTCCTGAATATTATTTTCAGTTTTCTACAACTTGCAACTAATGGAGACCTCTGTTTTACTTTTCATTTAATTTGATCCGATTTGTCTCTGTTCCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGGTAACGATCACTATATCCGTCATTATTTCAAATACAGATATATCTTTTGTTCTGTACCTATTTCATTATTTATTTTTGGTTTTGAAAAATTAAGCCTATTTCCTCTCAATTTTTTACCAAGATTTTTATGTTTCTGGTATAAGAGTTGAATTTTCAAATTTTCCAGTTAAATTCAAAAAATAAAATCATGATTTTAAAAACTATTTTTTTTTCAGTTTGCCAAATTTGGAAGGTGGAAGGAGTGTTTACGGGCTTAATGATCAAAAACAAAAGATCAAATTGTTTATGAATGTGCGTGTTAAACCTGTGTAACCTAGGGTCAAGAAGTTAAAGCCTCTCTTTGGTAATATGAACTTACCCAAGCTTATGAGATCTTCACTTTATACTGTATTCTAATTCTTTTAAATCATAAACCCATGAACTAAATATCGCAATGGGAACTAAGTTTCTATATGTATTTGTTTATATTATACAATTCGAACCGACGTTCACACAAACCTAAATGTCCATCTTCTAGGCTTACTAAAATCACAAGCCAAGCGCCCCTGACTCCCTTTACGGATTTATGTGTTAGTTTTTATGACAAAAGATGCCTGAGAATAATGTGTCCGAGAATGAGATGTCTAAGAATCAAAGATAATTGAGTTTGATCGTACATGGCCACAAATTGTGTTTTTATTTAATTTATAGAATTACACATGAAAATCTTACATAGATGGATGCGAAGTGTATGCCAAAGTGTACAAATGATTTGGTTCTGTTAGAGGCGATAAATTAACCACAGAACATCTTATAAACGAGATAGATTATCATTGTCTGATGGAAAATACTGCTCGTCCCCCATTGTATGAGATCAATACAACAGGTGGGTAAGCTTTTCTTCTTTTATTTTCCTCGAAAGCTTGTTAATCAATAATTAGTTACACTCAGATCAACATACTAGATGTAAGGAACGACACTTAAGTTTAGCGAGCA

mRNA sequence

CAAATTACTCTTTTAGAGAAATAAAAATTTCGTTTACGAGGGAAGGACAAGGTGTATTTGTTGTGTACTCCGCCGGTAAGAAACTAAAAACACTAACACAAACGCGAACGAGTGAAAACAGCCATAGAAATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTCTCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCAATTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGTTTGCCAAATTTGGAAGGTGGAAGGAGTGTTTACGGGCTTAATGATCAAAAACAAAAGATCAAATTGTTTATGAATGTGCGTGTTAAACCTGTGTAACCTAGGGTCAAGAAGTTAAAGCCTCTCTTTGGTAATATGAACTTACCCAAGCTTATGAGATCTTCACTTTATACTGTATTCTAATTCTTTTAAATCATAAACCCATGAACTAAATATCGCAATGGGAACTAAGTTTCTATATGTATTTGTTTATATTATACAATTCGAACCGACGTTCACACAAACCTAAATGTCCATCTTCTAGGCTTACTAAAATCACAAGCCAAGCGCCCCTGACTCCCTTTACGGATTTATGTGTTAGTTTTTATGACAAAAGATGCCTGAGAATAATGTGTCCGAGAATGAGATGTCTAAGAATCAAAGATAATTGAGTTTGATCGTACATGGCCACAAATTGTGTTTTTATTTAATTTATAGAATTACACATGAAAATCTTACATAGATGGATGCGAAGTGTATGCCAAAGTGTACAAATGATTTGGTTCTGTTAGAGGCGATAAATTAACCACAGAACATCTTATAAACGAGATAGATTATCATTGTCTGATGGAAAATACTGCTCGTCCCCCATTGTATGAGATCAATACAACAGGTGGGTAAGCTTTTCTTCTTTTATTTTCCTCGAAAGCTTGTTAATCAATAATTAGTTACACTCAGATCAACATACTAGATGTAAGGAACGACACTTAAGTTTAGCGAGCA

Coding sequence (CDS)

ATGGACGGAGAACTGCCGCCGGCATCGGCACCGGCTCCGGCTCCGGCTCCACTGTCCATCCATCCTGCCGTAACACCGCTCTCATTCTTACTCGGAACATGGAGAGGCAAAGGCGAAGGTGGATTCCCCACCATTAATTCCTTCTCTTACGGCGAGGAACTTCAATTCTCCCATTCTGGCAAGCCAGTGATTTCCTACAGTCAAAAGACATGGAAACTCGATTCTAAAGAGCCAATGCATGCTGAGAGTGGCTATTGGCGTCCCAAGCCCGATGGTACCATTGAGGTAGTCATCGCTCAAAGTACTGGTCTCGTTGAAGTTCAGAAAGGAACCTACAATGCAGAAGAGAAAGTGATAAAGCTTCAAAGCGAACTTGTGGGAAATGCTTCTAAGTTTGCCAAATTTGGAAGGTGGAAGGAGTGTTTACGGGCTTAA

Protein sequence

MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKFAKFGRWKECLRA*

Homology

[Close]

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot
Match: O64527 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thaliana OX=3702 GN=At1g79260 PE=1 SV=1)

HSP 1 Score: 238.0 bits (606), Expect = 7.7e-62
Identity = 117/158 (74.05%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE++FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

[Close]

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot
Match: B2HLY1 (UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marinum (strain ATCC BAA-535 / M) OX=216594 GN=MMAR_1995 PE=3 SV=1)

HSP 1 Score: 122.1 bits (305), Expect = 6.1e-27
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGSGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  APLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

[Close]

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot
Match: A0PT73 (UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcerans (strain Agy99) OX=362242 GN=MUL_3360 PE=3 SV=1)

HSP 1 Score: 121.7 bits (304), Expect = 8.0e-27
Identity = 65/158 (41.14%), Postives = 95/158 (60.13%), Query Frame = 0


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP + Y+QKT  +   
Sbjct: 2   PADLHPDLDALAPLLGTWAGQGAGEYPTIEPFEYLEEVVFSHVGKPFLVYAQKTRAVADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQS-----ELVGNASK 136
            P+HAE+GY R    G +E+V+A  +G+ E++ GTY+A   VI+++       +   A +
Sbjct: 62  TPLHAETGYLRVPKPGQVELVLAHPSGITEIEVGTYSASGGVIEMEMVTTAIGMTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTK 170
           V  +SR F++V  ELSY ++M      LQ HL A L +
Sbjct: 122 VTALSRSFRMVGDELSYRLRMGAVGLPLQHHLGARLRR 159

[Close]

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot
Match: Q73W27 (UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=MAP_2833c PE=3 SV=1)

HSP 1 Score: 120.2 bits (300), Expect = 2.3e-26
Identity = 63/156 (40.38%), Postives = 94/156 (60.26%), Query Frame = 0


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L  +A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPSAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  ++R F++   ELSY VQM      LQ HL A+L
Sbjct: 122 VTALARWFRIDGDELSYSVQMGAVGQPLQDHLAAVL 157

[Close]

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot
Match: A0QIQ0 (UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium (strain 104) OX=243243 GN=MAV_3611 PE=3 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 1.2e-25
Identity = 62/156 (39.74%), Postives = 92/156 (58.97%), Query Frame = 0


Query: 17  PLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWKLDSK 76
           P  +HP +  L+ LLGTW G+G G +PTI  F Y EE+ FSH GKP ++Y+QKT      
Sbjct: 2   PTDLHPDLAALAPLLGTWTGRGSGKYPTIQPFDYLEEVTFSHVGKPFLAYAQKTRAAADG 61

Query: 77  EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSE-----LVGNASK 136
           +P+HAE+GY R    G +E+V+A  +G+ E++ G+Y     +I+++       L   A +
Sbjct: 62  KPLHAETGYLRVPQPGRLELVLAHPSGITEIEVGSYAVTGGLIEMRMSTTSIGLTPTAKE 121

Query: 137 VKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALL 168
           V  + R F++   +LSY VQM      LQ HL A+L
Sbjct: 122 VTALGRWFRIDGDKLSYSVQMGAVGQPLQDHLAAVL 157

[Close]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL
Match: A0A0A0KAL2 (DUF1794 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G134380 PE=3 SV=1)

HSP 1 Score: 334.0 bits (855), Expect = 3.8e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL
Match: A0A1S3C440 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103496266 PE=3 SV=1)

HSP 1 Score: 314.3 bits (804), Expect = 3.1e-82
Identity = 161/170 (94.71%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELPPASAPAP     SIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELPPASAPAPP----SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGT+NAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL
Match: A0A6J1JFE2 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111484010 PE=3 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 1.8e-77
Identity = 152/170 (89.41%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELP      P PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+ FSHSG
Sbjct: 1   MDGELP------PIPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT  TSLQPHLKA LTKV
Sbjct: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGSTSLQPHLKASLTKV 164

[Close]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL
Match: A0A6J1FXD9 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Cucurbita moschata OX=3662 GN=LOC111448438 PE=4 SV=1)

HSP 1 Score: 298.1 bits (762), Expect = 2.3e-77
Identity = 152/170 (89.41%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELP      P PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+ FSHSG
Sbjct: 1   MDGELP------PVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQ HLKA LTKV
Sbjct: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQQHLKASLTKV 164

[Close]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL
Match: A0A6J1D7N5 (UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Momordica charantia OX=3673 GN=LOC111018028 PE=3 SV=1)

HSP 1 Score: 295.0 bits (754), Expect = 2.0e-76
Identity = 151/170 (88.82%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELPPASAP+      SIHPAV PLSFLLGTWRGKGEGGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELPPASAPS------SIHPAVAPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISY+QKTWKL S EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEE  IK
Sbjct: 61  KPVISYTQKTWKLSSGEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEENAIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEI+RVFKLVDG+LSYVVQMAT  TSLQPHLKALL+KV
Sbjct: 121 LQSELVGNASKVKEITRVFKLVDGDLSYVVQMATGSTSLQPHLKALLSKV 164

[Close]

BLAST of CSPI06G10880 vs. NCBI nr
Match: XP_004139918.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus] >XP_004139919.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus] >XP_011656970.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus] >XP_011656971.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sativus] >KGN46780.1 hypothetical protein Csa_020925 [Cucumis sativus])

HSP 1 Score: 334.0 bits (855), Expect = 7.8e-88
Identity = 169/170 (99.41%), Postives = 169/170 (99.41%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 170

[Close]

BLAST of CSPI06G10880 vs. NCBI nr
Match: XP_008456272.1 (PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis melo])

HSP 1 Score: 314.3 bits (804), Expect = 6.4e-82
Identity = 161/170 (94.71%), Postives = 163/170 (95.88%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELPPASAPAP     SIHPAVTPLSFLLGTWRGKG+GGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELPPASAPAPP----SIHPAVTPLSFLLGTWRGKGDGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGT+NAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTFNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSYVVQMAT LTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATALTSLQPHLKALLTKV 166

[Close]

BLAST of CSPI06G10880 vs. NCBI nr
Match: XP_038900799.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida])

HSP 1 Score: 311.6 bits (797), Expect = 4.2e-81
Identity = 159/170 (93.53%), Postives = 162/170 (95.29%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELP      PAPAPLSIHPAVTPLSFLLGTWRG+G+GGFPTINSFSYGEEL FSHSG
Sbjct: 1   MDGELP------PAPAPLSIHPAVTPLSFLLGTWRGRGDGGFPTINSFSYGEELHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK
Sbjct: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSELVGNASKVKEISRVFKLVDGELSY+VQMAT LTSLQPHLKALLTKV
Sbjct: 121 LQSELVGNASKVKEISRVFKLVDGELSYLVQMATGLTSLQPHLKALLTKV 164

[Close]

BLAST of CSPI06G10880 vs. NCBI nr
Match: XP_023512065.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo] >XP_023512066.1 UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 301.2 bits (770), Expect = 5.6e-78
Identity = 153/170 (90.00%), Postives = 157/170 (92.35%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELP      P PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+ FSHSG
Sbjct: 1   MDGELP------PVPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT LTSLQPHLKA LTKV
Sbjct: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGLTSLQPHLKASLTKV 164

[Close]

BLAST of CSPI06G10880 vs. NCBI nr
Match: XP_022986194.1 (UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita maxima] >XP_022986195.1 UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita maxima])

HSP 1 Score: 298.5 bits (763), Expect = 3.7e-77
Identity = 152/170 (89.41%), Postives = 156/170 (91.76%), Query Frame = 0


Query: 1   MDGELPPASAPAPAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSG 60
           MDGELP      P PAPLSIHPAV PLSFLLGTWRGKG+GGFPTINSFSYGEE+ FSHSG
Sbjct: 1   MDGELP------PIPAPLSIHPAVAPLSFLLGTWRGKGDGGFPTINSFSYGEEIHFSHSG 60

Query: 61  KPVISYSQKTWKLDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIK 120
           KPVISYSQKTWKLDS+EPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVI 
Sbjct: 61  KPVISYSQKTWKLDSREPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIM 120

Query: 121 LQSELVGNASKVKEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           LQSE+VGNASKVKEISR FKLVDGELSYVVQMAT  TSLQPHLKA LTKV
Sbjct: 121 LQSEVVGNASKVKEISRAFKLVDGELSYVVQMATGSTSLQPHLKASLTKV 164

[Close]

BLAST of CSPI06G10880 vs. TAIR 10
Match: AT1G79260.1 (CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR014878); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 238.0 bits (606), Expect = 5.5e-63
Identity = 117/158 (74.05%), Postives = 140/158 (88.61%), Query Frame = 0


Query: 13  PAPAPLSIHPAVTPLSFLLGTWRGKGEGGFPTINSFSYGEELQFSHSGKPVISYSQKTWK 72
           P  +P  +HP V PLS+LLGTWRG+GEG +PTI SF YGEE++FSHSGKPVI+Y+QKTWK
Sbjct: 10  PGESP-PVHPFVAPLSYLLGTWRGQGEGEYPTIPSFRYGEEIRFSHSGKPVIAYTQKTWK 69

Query: 73  LDSKEPMHAESGYWRPKPDGTIEVVIAQSTGLVEVQKGTYNAEEKVIKLQSELVGNASKV 132
           L+S  PMHAESGY+RP+PDG+IEVVIAQSTGLVEVQKGTYN +E+ IKL+S+LVGNASKV
Sbjct: 70  LESGAPMHAESGYFRPRPDGSIEVVIAQSTGLVEVQKGTYNVDEQSIKLKSDLVGNASKV 129

Query: 133 KEISRVFKLVDGELSYVVQMATTLTSLQPHLKALLTKV 171
           KEISR F+LVDG+LSYVV+M+TT   LQPHLKA+L K+
Sbjct: 130 KEISREFELVDGKLSYVVRMSTTTNPLQPHLKAILDKL 166

The following BLAST results are available for this feature:

BLAST of CSPI06G10880 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O64527	7.7e-62	74.05	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Arabidopsis thalian...	[more]
B2HLY1	6.1e-27	41.14	UPF0678 fatty acid-binding protein-like protein MMAR_1995 OS=Mycobacterium marin...	[more]
A0PT73	8.0e-27	41.14	UPF0678 fatty acid-binding protein-like protein MUL_3360 OS=Mycobacterium ulcera...	[more]
Q73W27	2.3e-26	40.38	UPF0678 fatty acid-binding protein-like protein MAP_2833c OS=Mycolicibacterium p...	[more]
A0QIQ0	1.2e-25	39.74	UPF0678 fatty acid-binding protein-like protein MAV_3611 OS=Mycobacterium avium ...	[more]

BLAST of CSPI06G10880 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAL2	3.8e-88	99.41	DUF1794 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G134380 PE=...	[more]
A0A1S3C440	3.1e-82	94.71	UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 OS=Cucumis ...	[more]
A0A6J1JFE2	1.8e-77	89.41	UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 OS=Cucurbit...	[more]
A0A6J1FXD9	2.3e-77	89.41	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Cucurbita moschata ...	[more]
A0A6J1D7N5	2.0e-76	88.82	UPF0678 fatty acid-binding protein-like protein At1g79260 OS=Momordica charantia...	[more]

BLAST of CSPI06G10880 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139918.1	7.8e-88	99.41	UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 [Cucumis sa...	[more]
XP_008456272.1	6.4e-82	94.71	PREDICTED: UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X1 ...	[more]
XP_038900799.1	4.2e-81	93.53	UPF0678 fatty acid-binding protein-like protein At1g79260 [Benincasa hispida]	[more]
XP_023512065.1	5.6e-78	90.00	UPF0678 fatty acid-binding protein-like protein At1g79260 [Cucurbita pepo subsp....	[more]
XP_022986194.1	3.7e-77	89.41	UPF0678 fatty acid-binding protein-like protein At1g79260 isoform X2 [Cucurbita ...	[more]

BLAST of CSPI06G10880 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G79260.1	5.5e-63	74.05	CONTAINS InterPro DOMAIN/s: Domain of unknown function DUF1794 (InterPro:IPR0148...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014878	THAP4-like, heme-binding beta-barrel domain	PFAM	PF08768	DUF1794	coord: 24..131 e-value: 1.5E-35 score: 122.5
IPR014878	THAP4-like, heme-binding beta-barrel domain	CDD	cd07828	lipocalin_heme-bd-THAP4-like	coord: 24..130 e-value: 4.8139E-49 score: 152.396
IPR012674	Calycin	GENE3D	2.40.128.20		coord: 19..142 e-value: 6.5E-45 score: 154.7
IPR012674	Calycin	SUPERFAMILY	50814	Lipocalins	coord: 19..138
None	No IPR available	PANTHER	PTHR15854	THAP4 PROTEIN	coord: 9..134

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G10880.3	CSPI06G10880.3	mRNA
CSPI06G10880.2	CSPI06G10880.2	mRNA
CSPI06G10880.1	CSPI06G10880.1	mRNA