CSPI06G10520 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G10520
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	CASP-like protein
Location	Chr6: 9161919 .. 9162469 (-)
RNA-Seq Expression	CSPI06G10520
Synteny	CSPI06G10520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

CACATATTAATATTAATTGATTATTTAGTTTATTTATACGCCGTCGCGTCGCTGGTTGCCTCATCAACATTGCCTTCTACTTTTCTTTTCATTTTCCCTCGAAACACTCTCTAATTCTTTCTTCTTTCTTCTTTTTCTTTTTTTTCATTATGAAGAAATCAGGTTTCATCGCCGCCTCCGTCGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCTAAAGTTCTATTCCCTCGCCAGGTAACCCTTCTAAACCAACGATTCATCATTTTTCCCTCTTTAAAAACATCCTTCCTTTAAGATCTTGAACCCTCAATTTTTTTGTTTGATCCTGTAAATTTCTTGCCTTTTGAGATTTGGGAAGTTTTAATTACGCAGGAGGGAAAGGAAGGAGAGAACTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGA

mRNA sequence

CACATATTAATATTAATTGATTATTTAGTTTATTTATACGCCGTCGCGTCGCTGGTTGCCTCATCAACATTGCCTTCTACTTTTCTTTTCATTTTCCCTCGAAACACTCTCTAATTCTTTCTTCTTTCTTCTTTTTCTTTTTTTTCATTATGAAGAAATCAGGTTTCATCGCCGCCTCCGTCGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCTAAAGTTCTATTCCCTCGCCAGGAGGGAAAGGAAGGAGAGAACTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGA

Coding sequence (CDS)

ATGAAGAAATCAGGTTTCATCGCCGCCTCCGTCGCCGCCGCATCCGCCTCCGCCGCCGTCGCCTCCCCTTCTTCCTCTACCCTTGTTTGCAACCCTAAAGTTCTATTCCCTCGCCAGGAGGGAAAGGAAGGAGAGAACTCATCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCATCATCATCATCGTCTTCCACCGATAAATTTGCTCCTAAATTTGATGGATTGAGATTTATTGAAACTCTTGTAACGGCTCATAGATGA

Protein sequence

MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSSSSSSSTDKFAPKFDGLRFIETLVTAHR*

Homology

[Close]

BLAST of CSPI06G10520 vs. ExPASy TrEMBL
Match: A0A6J1CHM8 (uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011258 PE=4 SV=1)

HSP 1 Score: 95.9 bits (237), Expect = 9.0e-17
Identity = 62/87 (71.26%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKKS FIAASVA ASA A  ASPSSST VCNPKV FPRQEGK  ENSSSS+         
Sbjct: 1  MKKSAFIAASVAGASA-AVSASPSSSTFVCNPKVQFPRQEGKVEENSSSSA--------- 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
                DKFAPKFDGLRFIETLVTAHR
Sbjct: 61 ------DKFAPKFDGLRFIETLVTAHR 71

[Close]

BLAST of CSPI06G10520 vs. ExPASy TrEMBL
Match: A0A6J1I1D6 (uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626 PE=4 SV=1)

HSP 1 Score: 92.4 bits (228), Expect = 9.9e-16
Identity = 61/88 (69.32%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKE-GENSSSSSSSSSSSSS 60
          MKKSGFIAAS+AAASA A  ASPSSSTL C+PK+  PRQE KE GENSSSS+        
Sbjct: 1  MKKSGFIAASIAAASA-AVSASPSSSTLFCDPKIQLPRQEEKELGENSSSSA-------- 60

Query: 61 SSSSSSTDKFAPKFDGLRFIETLVTAHR 88
                 DKFAPKFDGLRFIETLVTAHR
Sbjct: 61 -------DKFAPKFDGLRFIETLVTAHR 72

[Close]

BLAST of CSPI06G10520 vs. ExPASy TrEMBL
Match: E0CTD2 (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=1)

HSP 1 Score: 74.7 bits (182), Expect = 2.1e-10
Identity = 50/87 (57.47%), Postives = 62/87 (71.26%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKKSGF AASVAAASA+ A+++PSSS  +CN K+   R E   G++  +S S  SSS+  
Sbjct: 1  MKKSGFFAASVAAASAT-AISAPSSSGFLCNSKIQLSRDEAVAGKDIENSESQRSSSA-- 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
                D+FAP+FDGLRFIETLVTAHR
Sbjct: 61 ------DRFAPRFDGLRFIETLVTAHR 78

[Close]

BLAST of CSPI06G10520 vs. ExPASy TrEMBL
Match: A0A5N5FS08 (Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D8674_039583 PE=4 SV=1)

HSP 1 Score: 71.2 bits (173), Expect = 2.4e-09
Identity = 48/87 (55.17%), Postives = 57/87 (65.52%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKK GF+AASVAAASA+A  A+ SSS+ V +  + F  QE  +  N              
Sbjct: 1  MKKPGFLAASVAAASATALSATSSSSSFVSDSTMRFSHQEAGDKRN------------QE 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
           SS+ST+KFAPKFDGLRFIETLVTAHR
Sbjct: 61 KSSASTEKFAPKFDGLRFIETLVTAHR 75

[Close]

BLAST of CSPI06G10520 vs. ExPASy TrEMBL
Match: A0A2P5EQL6 (Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_163540 PE=4 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.9e-09
Identity = 52/88 (59.09%), Postives = 60/88 (68.18%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEG-KEGENSSSSSSSSSSSSS 60
          MKK G +AASVA ASA+A   S SSS  VCN  V F RQE  ++GE   S+SSSS ++S 
Sbjct: 1  MKKPGLLAASVAVASATA--FSASSSNFVCNSSVQFSRQEDIRKGEREYSNSSSSETTS- 60

Query: 61 SSSSSSTDKFAPKFDGLRFIETLVTAHR 88
                 DKF P+FDGLRFIETLVTAHR
Sbjct: 61 -------DKFKPRFDGLRFIETLVTAHR 78

[Close]

BLAST of CSPI06G10520 vs. NCBI nr
Match: XP_004139940.2 (cell wall integrity and stress response component 1 [Cucumis sativus])

HSP 1 Score: 137.9 bits (346), Expect = 4.2e-29
Identity = 86/87 (98.85%), Postives = 86/87 (98.85%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGEN SSSSSSSSSSSSS
Sbjct: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGEN-SSSSSSSSSSSSS 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
          SSSSSTDKFAPKFDGLRFIETLVTAHR
Sbjct: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 86

[Close]

BLAST of CSPI06G10520 vs. NCBI nr
Match: XP_038902353.1 (uncharacterized protein LOC120088987 [Benincasa hispida])

HSP 1 Score: 107.1 bits (266), Expect = 8.0e-20
Identity = 66/87 (75.86%), Postives = 67/87 (77.01%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKKSGFIAASVAAA+ S   ASPSSSTLVCNPKV FPRQEGKEGEN              
Sbjct: 1  MKKSGFIAASVAAAAVS---ASPSSSTLVCNPKVQFPRQEGKEGEN-------------- 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
           SSSSTDKFAPKFDGLRFIETLVTAHR
Sbjct: 61 -SSSSTDKFAPKFDGLRFIETLVTAHR 69

[Close]

BLAST of CSPI06G10520 vs. NCBI nr
Match: XP_022140652.1 (uncharacterized protein LOC111011258 [Momordica charantia])

HSP 1 Score: 95.9 bits (237), Expect = 1.9e-16
Identity = 62/87 (71.26%), Postives = 63/87 (72.41%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKEGENSSSSSSSSSSSSSS 60
          MKKS FIAASVA ASA A  ASPSSST VCNPKV FPRQEGK  ENSSSS+         
Sbjct: 1  MKKSAFIAASVAGASA-AVSASPSSSTFVCNPKVQFPRQEGKVEENSSSSA--------- 60

Query: 61 SSSSSTDKFAPKFDGLRFIETLVTAHR 88
                DKFAPKFDGLRFIETLVTAHR
Sbjct: 61 ------DKFAPKFDGLRFIETLVTAHR 71

[Close]

BLAST of CSPI06G10520 vs. NCBI nr
Match: XP_022970726.1 (uncharacterized protein LOC111469626 [Cucurbita maxima])

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-15
Identity = 61/88 (69.32%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKE-GENSSSSSSSSSSSSS 60
          MKKSGFIAAS+AAASA A  ASPSSSTL C+PK+  PRQE KE GENSSSS+        
Sbjct: 1  MKKSGFIAASIAAASA-AVSASPSSSTLFCDPKIQLPRQEEKELGENSSSSA-------- 60

Query: 61 SSSSSSTDKFAPKFDGLRFIETLVTAHR 88
                 DKFAPKFDGLRFIETLVTAHR
Sbjct: 61 -------DKFAPKFDGLRFIETLVTAHR 72

[Close]

BLAST of CSPI06G10520 vs. NCBI nr
Match: KAG6604795.1 (hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 92.4 bits (228), Expect = 2.0e-15
Identity = 61/88 (69.32%), Postives = 65/88 (73.86%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLVCNPKVLFPRQEGKE-GENSSSSSSSSSSSSS 60
          MKKSGFIAASV AA A+A  ASPSSSTL C+PK+ FPRQE KE GENSSSS+        
Sbjct: 1  MKKSGFIAASVTAA-AAAVSASPSSSTLFCDPKIQFPRQEEKELGENSSSSA-------- 60

Query: 61 SSSSSSTDKFAPKFDGLRFIETLVTAHR 88
                 DKFAPKFDGLRFIETLVTAHR
Sbjct: 61 -------DKFAPKFDGLRFIETLVTAHR 72

[Close]

BLAST of CSPI06G10520 vs. TAIR 10
Match: AT4G28290.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; Has 45 Blast hits to 45 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 45; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.0 bits (136), Expect = 8.9e-09
Identity = 40/89 (44.94%), Postives = 56/89 (62.92%), Query Frame = 0


Query: 1  MKKSGFIAASVAAASASAAVASPSSSTLV--CNPKVLFPRQEGKEGENSSSSSSSSSSSS 60
          MKK+G IAAS++ A+++ A+++ S++T V   +P+    RQE KE +     SS      
Sbjct: 1  MKKTGIIAASISVAASATAISAGSTNTSVSFSSPESNLSRQEAKEKQRKKKGSSEDGGD- 60

Query: 61 SSSSSSSTDKFAPKFDGLRFIETLVTAHR 88
                  +KFAP+FDGLRFIETLVTAHR
Sbjct: 61 --------EKFAPRFDGLRFIETLVTAHR 80

[Close]

BLAST of CSPI06G10520 vs. TAIR 10
Match: AT5G42110.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: 6 growth stages; Has 36 Blast hits to 36 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 41.2 bits (95), Expect = 5.0e-04
Identity = 19/28 (67.86%), Postives = 23/28 (82.14%), Query Frame = 0


Query: 60 SSSSSSTDKFAPKFDGLRFIETLVTAHR 88
          S  ++ +D F P+FDGLRFIETLVTAHR
Sbjct: 35 SRKTNGSDNFEPRFDGLRFIETLVTAHR 62

The following BLAST results are available for this feature:

BLAST of CSPI06G10520 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G10520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CHM8	9.0e-17	71.26	uncharacterized protein LOC111011258 OS=Momordica charantia OX=3673 GN=LOC111011...	[more]
A0A6J1I1D6	9.9e-16	69.32	uncharacterized protein LOC111469626 OS=Cucurbita maxima OX=3661 GN=LOC111469626...	[more]
E0CTD2	2.1e-10	57.47	Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_12s0028g03790 PE=4 SV=...	[more]
A0A5N5FS08	2.4e-09	55.17	Uncharacterized protein OS=Pyrus ussuriensis x Pyrus communis OX=2448454 GN=D867...	[more]
A0A2P5EQL6	6.9e-09	59.09	Uncharacterized protein OS=Trema orientale OX=63057 GN=TorRG33x02_163540 PE=4 SV...	[more]

BLAST of CSPI06G10520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139940.2	4.2e-29	98.85	cell wall integrity and stress response component 1 [Cucumis sativus]	[more]
XP_038902353.1	8.0e-20	75.86	uncharacterized protein LOC120088987 [Benincasa hispida]	[more]
XP_022140652.1	1.9e-16	71.26	uncharacterized protein LOC111011258 [Momordica charantia]	[more]
XP_022970726.1	2.0e-15	69.32	uncharacterized protein LOC111469626 [Cucurbita maxima]	[more]
KAG6604795.1	2.0e-15	69.32	hypothetical protein SDJN03_02112, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of CSPI06G10520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28290.1	8.9e-09	44.94	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT5G42110.1	5.0e-04	67.86	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 35..70
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 42..69
None	No IPR available	PANTHER	PTHR34683	EXPRESSED PROTEIN-RELATED	coord: 1..87
None	No IPR available	PANTHER	PTHR34683:SF2	EXPRESSED PROTEIN	coord: 1..87

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G10520.1	CSPI06G10520.1	mRNA