CSPI06G10480 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G10480
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	RING-type domain-containing protein
Location	Chr6: 9127045 .. 9129772 (-)
RNA-Seq Expression	CSPI06G10480
Synteny	CSPI06G10480

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

GAAAAAAAGGAAAGGCGATTGAAGAGAAACCAGAGCTTTAAAAGAGAGCAATGTTTTTGTCCTTTACTTCTTTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCGTCTCTTCTATATCCATTCTTTTTCTCATTTCTATTGAATTTCAGATTCCTTCGCTCTTCTCGCTTTCTATATAAACTCCCTCTCAACCCTCCACCCTCCACATCGCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCCTCTCTCAACCAACCTTTTTAACTCTCACGCAGATACTAATCCGCCGATTAAATTTTGGTACGTTTCTGTTCCCCCCTTCTGTATGACTCTTAGATGGGACTGTGTTTCTCAGTGGATTAAGCTTTAGATCTGTTTGCCAATGTATATGGGTATTTTTTTTCGTTTAGGTTTCTTCCTTTCGAGACCTCTGATGGAGATGGGGTTCTTTGTTTTTGGTTTTTTTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGATATCGCTTCGAACTCCATCCCCTTTTTTTGTGGATGACTTTTGGGTTTCTTTGTTTTCTGAAACGGTTTTATGTGTTGTGCAGGCGGAAAACTTTCATGCTCTGTTTTTGCTCTGTTTTTTAGAGATGTTTTATGTGGTGTGAGGGTGGGGGTGGATTCTTTCGATTGTTTTATTTTTTCCAAAGATTAATACGCCAATAGAACTTTAGTCAAGTGGTGAGTTACGAAAATCTTGTGTTCTTGTTGGGTCTTTTGAATAGAAAGTTCACTTGGATTTTCCACCTCTTTGGAAAATGGAAGAGTAGTTATGTGGAGTTCTGATTTCGATTGCAACTTGGGTTTTGATTCATCTGTATATTGTTTTTGGTTATTAATTGTTGGGTTTGTGATTTTTCTTCATTTAGGAAAATTCTTAGTTATGTATTTATGCCGTTCTGGTTTCTTCTATGCATGATTATGCCTCTCGGATCTGTTTTTCAAGTAACTGATCCGAATTTATGTGTGTGCCTAAAGATTGATAGTTCTTTTCACTTTTCACCTGCACTGAGTCCATCTGCTTCAAAAGATGGCTTATGAATGCAGAAGATTCTGAATCTTTACCACGTTATGCAAGAAATTGGAACTTCTAACAATTTTATTAGGATAACGTAATCTAGGGAAGTTCTTGGATGGATTGTGTCTGTGAGAGTCATAACGAATCTCCATCATTTGAATTTCTTATTGATTAAATAAATTGAATCTGGGTCTGTCAAGATCAGCATGTTTTGATATTTATGGGAACTTCAGAAATCCTTGACACCATTCTCCACTTGGGGGTTTCGTGATAGAATTTTCAAGAGGCGACCATTCAGAATAGAATAATCTATAAGCTTACCCATGTTCGTGTCAGTTCTGGGACCCAATTAATATTATATTCGAAGCAGTGGATTAGGATGATTTGTTTTGCCGTTTCATCAGTTATCTTATCACTGCAATGAATGGGATGCTTTTGGTTTATTAATGAATTCCTAGTAAATCGTGCCTTTATAGCTTCTTGTCCGAATTGTTGATTCTTTTGTCTGCTTTTTTGCATCCTTGTATTTACAAACAGCAGCCTTTTACTGTGAATTTCTATTAGACTTTAGTTCTGAGTTCTGACCTTGTTTCTTGGATATGTTTATCAGCTTGAGGCATTATAGAAAGTAGACTGTGCTGAAACATAAACCTGGCCATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTTGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGATGTACAAAATGAATACATCACTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCTTTTAGACCATTTCTAGGCATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGCTACAAAATTTCCTTCAATCTGTTTCAAGGAATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGAGCAATAACGTAGGAATCTCCTAATAAGTGATCCACGAAAAGGAATGAAGATAGGGA

mRNA sequence

GAAAAAAAGGAAAGGCGATTGAAGAGAAACCAGAGCTTTAAAAGAGAGCAATGTTTTTGTCCTTTACTTCTTTGCTTTAAGCTCAGACGCCGCATCGTCATCGTCCCATCGTCTCTTCTATATCCATTCTTTTTCTCATTTCTATTGAATTTCAGATTCCTTCGCTCTTCTCGCTTTCTATATAAACTCCCTCTCAACCCTCCACCCTCCACATCGCCCTCTTCAAATTCATATTCCTTCTTCTTCCTCCTCCTCTCTCAACCAACCTTTTTAACTCTCACGCAGATACTAATCCGCCGATTAAATTTTGCTTGAGGCATTATAGAAAGTAGACTGTGCTGAAACATAAACCTGGCCATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTTGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGATGTACAAAATGAATACATCACTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAAGAAGCTCCTTTTAGACCATTTCTAGGCATTGGATGTAGATATATACACATAGCATGTAACTATGAGCTTAGTGTAAAAAAGGGCTACAAAATTTCCTTCAATCTGTTTCAAGGAATTGGTGGATGTATAATGAAAATTATTTTATGTGGGAATCCCATTATCACAAAAAGTTAATTAGATGAGCAATAACGTAGGAATCTCCTAATAAGTGATCCACGAAAAGGAATGAAGATAGGGA

Coding sequence (CDS)

ATGGAACAGGAGTACCTTGAAGAGACTTTGATGCAAAACGACAATTCATTAGGAGGAGACAAATTATGTTTAGACAACCAAATATATATTTCAGATGCTGAAGATGAAGCTTCCCATGGCTTTGACTGCAACATATGCCTAGACTCGGTTCAAGATCCTGTTGTAACCCTTTGTGGTCATCTCTTCTGTTGGCCCTGCATTTATAAATGGCTTCACTGCAAGAAATTATCTGCACAACGATGCCAACAAGTGGAATGCCGATGTCCTGTTTGCAAGGCCAAAGTCTCCCGTGCTACTCTCGTCCCAATCTACGGAAAATTTCAAACTACAGATGCCTCAAAAGCTGAAGCACCTCCAAATCTTGGCCCAGCCATCCCACGCAGGCCGCTTGGGCGGCATGCTTGTGAGGCAGAGACACCAGCATCTCCAACCCCCCAACTTCATTCCGACAACTATTCTCCTCAGTCACACTCGTACTACGCACAAACACAAAACGATGTACAAAATGAATACATCACTTCGTCAATGCTTAGCTCAAGCAGTATCACAACAAACATTATCCATCCAGTGATCGGAATGTTTGGTGACACGATTTACGCAAGAACGTTTGGAAACACAACAACGAACCTGTACACTTATCCAAATTCATATGGTAATGTGAGCAACAGTAGTGTAAGACTGAGGAGGCACATAATGCAGGCTGATGAGTCACTGAGCAGAATCTGTTTTTTCTTTTTTTGCTGCTTAGTAATATGTCTTCTTTTATTCTAA

Protein sequence

MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF*

Homology

[Close]

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot
Match: Q6R567 (E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=1)

HSP 1 Score: 211.5 bits (537), Expect = 1.2e-53
Identity = 120/261 (45.98%), Postives = 160/261 (61.30%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           M  E L+ T  ++D  LG  K   D      + E+  S GFDCNICLD V +PV+TLCGH
Sbjct: 5   MALEQLDTTFNKHDTPLGKWKSMND------EVEENISGGFDCNICLDCVHEPVITLCGH 64

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGK-FQTTDASKAEAPP 120
           L+CWPCIYKW++ + +S++   Q + +CPVCKA+VS  TL+P+YG+  Q+T  S+ +A P
Sbjct: 65  LYCWPCIYKWIYFQSVSSENSDQQQPQCPVCKAEVSEKTLIPLYGRGGQSTKPSEGKA-P 124

Query: 121 NLGPAIPRRP----LGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSS 180
           NLG  IP+RP     G H     T ++P+  L    Y  QS +     Q   Q  Y++S 
Sbjct: 125 NLGIVIPQRPPSPRCGGHFLLPTTDSNPSQLLQRRGYQQQSQT----RQPAYQGSYMSSP 184

Query: 181 MLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQAD 240
           MLS    T N++     M G+  YAR FGN++T +YTYPNSY    +SS R+RR + QAD
Sbjct: 185 MLSPGGATANMLQH--SMIGEVAYARIFGNSSTTMYTYPNSYNLAISSSPRMRRQLSQAD 244

Query: 241 ESLSRICFFFFCCLVICLLLF 257
            SL RICFF FCC V CL+LF
Sbjct: 245 RSLGRICFFLFCCFVTCLILF 252

[Close]

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot
Match: O64425 (E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV=1)

HSP 1 Score: 169.5 bits (428), Expect = 5.0e-41
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 0


Query: 33  AEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCK 92
           ++D     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPTPQLHSDNY 152
           +KVS +TLVP+YG+ + T   + +       ++P+RP+G      E P SP     S + 
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSP---YASTDL 157

Query: 153 SPQSHSYYAQTQNDVQNEYITSSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLY 212
                 ++   Q   +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + +
Sbjct: 158 RLSQRVHFNSPQ---EGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRF 217

Query: 213 TYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
            YP++Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 AYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot
Match: Q8GUK7 (E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 3.2e-35
Identity = 90/219 (41.10%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATL 100
           FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+    Q +  CPVCK+ ++  +L
Sbjct: 42  FDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHV-QLSSVSVDQHQNNCPVCKSNITITSL 101

Query: 101 VPIYGKFQTTDASK--AEAPPNLGPAIPRRPLGRHACEAETPASP-TPQLHSDNYSPQSH 160
           VP+YG+  ++ +S   ++    L   IPRRP         T AS   P L     SP  H
Sbjct: 102 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 161

Query: 161 SYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSY 220
           ++    Q   +    T S   ++++  + ++PVIGMFGD +Y R FG T TN    P   
Sbjct: 162 NH----QYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFG-TFTNTIAQPYQ- 221

Query: 221 GNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
                      + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 222 ----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot
Match: P93030 (E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV=1)

HSP 1 Score: 132.5 bits (332), Expect = 6.8e-30
Identity = 84/222 (37.84%), Postives = 111/222 (50.00%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVE-----CRCPVCKAKV 100
           FDCNICLD V+DPVVTLCGHLFCWPCI+KW +    S QR  Q +      +CPVCK+ V
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 101 SRATLVPIYGKFQTTDASKAEAPPN-LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSP 160
           S ATLVPIYG+ Q    S +  P    GP    R +G+   E E+               
Sbjct: 79  SEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGES--------------- 138

Query: 161 QSHSYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYP 220
           Q + Y                          +  PV+G+  + +Y R FG +++N+  Y 
Sbjct: 139 QRYMY-------------------------RMPDPVMGVVCEMVYRRLFGESSSNMAPY- 193

Query: 221 NSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
                  + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 199 ------RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot
Match: Q5ZIR9 (E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1)

HSP 1 Score: 84.0 bits (206), Expect = 2.8e-15
Identity = 37/79 (46.84%), Postives = 52/79 (65.82%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATL 100
           F+CNICLD+ +D V++LCGHLFCWPC+++WL  +       +QV   CPVCKA +SR  +
Sbjct: 39  FECNICLDTAKDAVISLCGHLFCWPCLHQWLETRP-----NRQV---CPVCKAGISRDKV 98

Query: 101 VPIYGKFQTTDASKAEAPP 120
           +P+YG+  T      E  P
Sbjct: 99  IPLYGRGSTGQQDPREKTP 109

[Close]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL
Match: A0A0A0KB39 (RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 PE=4 SV=1)

HSP 1 Score: 506.9 bits (1304), Expect = 4.9e-140
Identity = 249/256 (97.27%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQEYLEETLMQNDNSLGGD+LCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQT    QNEYI SSMLSSS
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQT----QNEYIASSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSR 240
           SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNV+NSSVRLRRHIMQADESLSR
Sbjct: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSR 240

Query: 241 ICFFFFCCLVICLLLF 257
           ICFFFFCCLVICLLLF
Sbjct: 241 ICFFFFCCLVICLLLF 252

[Close]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL
Match: A0A1S3BJB6 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 SV=1)

HSP 1 Score: 474.2 bits (1219), Expect = 3.5e-130
Identity = 235/256 (91.80%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGDKL LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QT    QNEYI+SSMLSSS
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQT----QNEYISSSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSR 240
           SITTNIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSSVRLRRHIMQADESLSR
Sbjct: 181 SITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSR 240

Query: 241 ICFFFFCCLVICLLLF 257
           ICFFFFCCLVICLLLF
Sbjct: 241 ICFFFFCCLVICLLLF 252

[Close]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL
Match: A0A5A7V6F7 (E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold143G001700 PE=4 SV=1)

HSP 1 Score: 412.9 bits (1060), Expect = 9.7e-112
Identity = 203/224 (90.62%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGDKL LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QT    QNEYI+SSMLSSS
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQT----QNEYISSSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSS 225
           SITTNIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSS
Sbjct: 181 SITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSS 220

[Close]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL
Match: A0A6J1CHP4 (E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111010997 PE=4 SV=1)

HSP 1 Score: 362.5 bits (929), Expect = 1.5e-96
Identity = 188/258 (72.87%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEET+M++ NS G DK CLDNQ  +SDA+  ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEETVMRS-NSFGEDKFCLDNQTCVSDADGGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPP 120
           LFCWPCIYKWLH K LSA Q+CQ  E  CPVCKA+VS A+LVP+YG+FQTT+ S+ +A  
Sbjct: 61  LFCWPCIYKWLHYKNLSAQQQCQPQENCCPVCKAEVSHASLVPLYGRFQTTNPSETKA-S 120

Query: 121 NLGPAIPRRPLGRHACEAETPASPTPQLHSDN-YSPQSHSYYAQTQNDVQNEYITSSMLS 180
            LGPAIPRRPLG     AE PASP+PQLH  N Y P +HSY+ +T  D    YITSSML 
Sbjct: 121 QLGPAIPRRPLGPACGAAEAPASPSPQLHPHNYYLPHAHSYHPRTTQD----YITSSMLG 180

Query: 181 SSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESL 240
           SSSITTNIIHPVIG FG+ IYAR FGNTTT+L+TYPNSYG+VSNSS RLRRH+MQADESL
Sbjct: 181 SSSITTNIIHPVIGTFGEAIYARAFGNTTTSLHTYPNSYGHVSNSSARLRRHMMQADESL 240

Query: 241 SRICFFFFCCLVICLLLF 257
           SRICFFFFCCLV+C L F
Sbjct: 241 SRICFFFFCCLVLCFLSF 252

[Close]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL
Match: A0A6J1FXR1 (E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC111448157 PE=4 SV=1)

HSP 1 Score: 343.2 bits (879), Expect = 9.4e-91
Identity = 175/232 (75.43%), Postives = 194/232 (83.62%), Query Frame = 0


Query: 27  QIY-ISDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSA-QRCQQV 86
           Q+Y + +A++  SHGF+CNICLDSVQDPVVTLCGHLFCWPCIYKW+H K LS+ Q+CQQ 
Sbjct: 3   QLYLVPEADEGVSHGFECNICLDSVQDPVVTLCGHLFCWPCIYKWIHYKSLSSQQQCQQE 62

Query: 87  ECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPT 146
           ECRCPVCKA+VS ATLVP+YGKFQTT  SK + P NLGPAIPRRPLG  AC  E PASP+
Sbjct: 63  ECRCPVCKAEVSHATLVPLYGKFQTTPPSKTKPPSNLGPAIPRRPLG-PACGGEPPASPS 122

Query: 147 PQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFG 206
            QLH  NYS QSH           ++YI SSMLSSSSITTNIIHPVIGMFGD +Y RTFG
Sbjct: 123 AQLHHHNYS-QSH-----------DDYIASSMLSSSSITTNIIHPVIGMFGDAVYTRTFG 182

Query: 207 NTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
           NTT+NLYTYPNSYG+VSNSSVRLRRHIMQADESLSRICFF FCCLV+CLLLF
Sbjct: 183 NTTSNLYTYPNSYGHVSNSSVRLRRHIMQADESLSRICFFLFCCLVLCLLLF 221

[Close]

BLAST of CSPI06G10480 vs. NCBI nr
Match: XP_004139942.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >KGN46743.1 hypothetical protein Csa_020992 [Cucumis sativus])

HSP 1 Score: 506.9 bits (1304), Expect = 1.0e-139
Identity = 249/256 (97.27%), Postives = 251/256 (98.05%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQEYLEETLMQNDNSLGGD+LCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQEYLEETLMQNDNSLGGDRLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN
Sbjct: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQT    QNEYI SSMLSSS
Sbjct: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQT----QNEYIASSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSR 240
           SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNV+NSSVRLRRHIMQADESLSR
Sbjct: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVNNSSVRLRRHIMQADESLSR 240

Query: 241 ICFFFFCCLVICLLLF 257
           ICFFFFCCLVICLLLF
Sbjct: 241 ICFFFFCCLVICLLLF 252

[Close]

BLAST of CSPI06G10480 vs. NCBI nr
Match: XP_008448288.1 (PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_016900554.1 PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo])

HSP 1 Score: 474.2 bits (1219), Expect = 7.3e-130
Identity = 235/256 (91.80%), Postives = 242/256 (94.53%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGDKL LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QT    QNEYI+SSMLSSS
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQT----QNEYISSSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLSR 240
           SITTNIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSSVRLRRHIMQADESLSR
Sbjct: 181 SITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSSVRLRRHIMQADESLSR 240

Query: 241 ICFFFFCCLVICLLLF 257
           ICFFFFCCLVICLLLF
Sbjct: 241 ICFFFFCCLVICLLLF 252

[Close]

BLAST of CSPI06G10480 vs. NCBI nr
Match: XP_038901529.1 (E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida])

HSP 1 Score: 414.1 bits (1063), Expect = 9.0e-112
Identity = 210/257 (81.71%), Postives = 226/257 (87.94%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           ME +Y+EETL+QN+NSL G+KLCLDNQ  ISDA+D ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEHQYVEETLIQNNNSLRGNKLCLDNQTCISDADDGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPP 120
           LFCWPCIYKWL  K LSA Q+CQQ ECRCPVCKA+VS  TLVPIYGKFQT + SKA+AP 
Sbjct: 61  LFCWPCIYKWLQYKNLSAQQQCQQAECRCPVCKAEVSHTTLVPIYGKFQTINPSKAKAPS 120

Query: 121 NLGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSS 180
           NLGPAIPRRPLGR AC  E PASP+PQLH  NYSPQS+SYY++TQN+    YI SSMLSS
Sbjct: 121 NLGPAIPRRPLGR-ACGTEAPASPSPQLHPRNYSPQSNSYYSRTQNN----YIASSMLSS 180

Query: 181 SSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESLS 240
           SSITTNIIHPVIGMFGD IY RTF NTT NLYTYPNSYG+VSNSSVRLRRHIMQADESLS
Sbjct: 181 SSITTNIIHPVIGMFGDAIYTRTFRNTTPNLYTYPNSYGHVSNSSVRLRRHIMQADESLS 240

Query: 241 RICFFFFCCLVICLLLF 257
           RICFF FCCLVICLLLF
Sbjct: 241 RICFFLFCCLVICLLLF 252

[Close]

BLAST of CSPI06G10480 vs. NCBI nr
Match: KAA0062066.1 (E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa])

HSP 1 Score: 412.9 bits (1060), Expect = 2.0e-111
Identity = 203/224 (90.62%), Postives = 210/224 (93.75%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEE LM NDNSLGGDKL LD Q YISDAEDEASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEEALMPNDNSLGGDKLRLDIQTYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPPN 120
           LFCWPCIYKWLH KKLSAQ+CQQVECRCPVCKAKVSRATL+PIYGKFQTTDASKA+APPN
Sbjct: 61  LFCWPCIYKWLHSKKLSAQQCQQVECRCPVCKAKVSRATLIPIYGKFQTTDASKAKAPPN 120

Query: 121 LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSPQSHSYYAQTQNDVQNEYITSSMLSSS 180
           LGPAIPRRPLG HACEAETPASPTPQLHS NYSPQSHSYY+QT    QNEYI+SSMLSSS
Sbjct: 121 LGPAIPRRPLGWHACEAETPASPTPQLHSHNYSPQSHSYYSQT----QNEYISSSMLSSS 180

Query: 181 SITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSS 225
           SITTNIIHPVIGMFGDTIY RT GNTTTNLY+YPNSYGNVSNSS
Sbjct: 181 SITTNIIHPVIGMFGDTIYPRTLGNTTTNLYSYPNSYGNVSNSS 220

[Close]

BLAST of CSPI06G10480 vs. NCBI nr
Match: XP_022140292.1 (E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia])

HSP 1 Score: 362.5 bits (929), Expect = 3.1e-96
Identity = 188/258 (72.87%), Postives = 212/258 (82.17%), Query Frame = 0


Query: 1   MEQEYLEETLMQNDNSLGGDKLCLDNQIYISDAEDEASHGFDCNICLDSVQDPVVTLCGH 60
           MEQ+YLEET+M++ NS G DK CLDNQ  +SDA+  ASHGFDCNICLDSVQDPVVTLCGH
Sbjct: 1   MEQQYLEETVMRS-NSFGEDKFCLDNQTCVSDADGGASHGFDCNICLDSVQDPVVTLCGH 60

Query: 61  LFCWPCIYKWLHCKKLSA-QRCQQVECRCPVCKAKVSRATLVPIYGKFQTTDASKAEAPP 120
           LFCWPCIYKWLH K LSA Q+CQ  E  CPVCKA+VS A+LVP+YG+FQTT+ S+ +A  
Sbjct: 61  LFCWPCIYKWLHYKNLSAQQQCQPQENCCPVCKAEVSHASLVPLYGRFQTTNPSETKA-S 120

Query: 121 NLGPAIPRRPLGRHACEAETPASPTPQLHSDN-YSPQSHSYYAQTQNDVQNEYITSSMLS 180
            LGPAIPRRPLG     AE PASP+PQLH  N Y P +HSY+ +T  D    YITSSML 
Sbjct: 121 QLGPAIPRRPLGPACGAAEAPASPSPQLHPHNYYLPHAHSYHPRTTQD----YITSSMLG 180

Query: 181 SSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSYGNVSNSSVRLRRHIMQADESL 240
           SSSITTNIIHPVIG FG+ IYAR FGNTTT+L+TYPNSYG+VSNSS RLRRH+MQADESL
Sbjct: 181 SSSITTNIIHPVIGTFGEAIYARAFGNTTTSLHTYPNSYGHVSNSSARLRRHMMQADESL 240

Query: 241 SRICFFFFCCLVICLLLF 257
           SRICFFFFCCLV+C L F
Sbjct: 241 SRICFFFFCCLVLCFLSF 252

[Close]

BLAST of CSPI06G10480 vs. TAIR 10
Match: AT4G03510.1 (RING membrane-anchor 1 )

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-42
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 0


Query: 33  AEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCK 92
           ++D     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPTPQLHSDNY 152
           +KVS +TLVP+YG+ + T   + +       ++P+RP+G      E P SP     S + 
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSP---YASTDL 157

Query: 153 SPQSHSYYAQTQNDVQNEYITSSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLY 212
                 ++   Q   +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + +
Sbjct: 158 RLSQRVHFNSPQ---EGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRF 217

Query: 213 TYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
            YP++Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 AYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CSPI06G10480 vs. TAIR 10
Match: AT4G03510.2 (RING membrane-anchor 1 )

HSP 1 Score: 169.5 bits (428), Expect = 3.6e-42
Identity = 96/225 (42.67%), Postives = 136/225 (60.44%), Query Frame = 0


Query: 33  AEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCK 92
           ++D     FDCNICLDSVQ+PVVTLCGHLFCWPCI+KWL  +  S     Q   +CPVCK
Sbjct: 38  SDDTDDSNFDCNICLDSVQEPVVTLCGHLFCWPCIHKWLDVQSFSTSDEYQRHRQCPVCK 97

Query: 93  AKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETPASPTPQLHSDNY 152
           +KVS +TLVP+YG+ + T   + +       ++P+RP+G      E P SP     S + 
Sbjct: 98  SKVSHSTLVPLYGRGRCTTQEEGK------NSVPKRPVG-PVYRLEMPNSP---YASTDL 157

Query: 153 SPQSHSYYAQTQNDVQNEYITSSMLSSSSIT-TNIIHPVIGMFGDTIYARTFGNTTTNLY 212
                 ++   Q   +  Y  S ++SS+S++ + ++ PV+ M G+ +  R FG    + +
Sbjct: 158 RLSQRVHFNSPQ---EGYYPVSGVMSSNSLSYSAVLDPVMVMVGEMVATRLFGTRVMDRF 217

Query: 213 TYPNSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
            YP++Y     S  R+RR IMQAD+SL RI FFF CC+V+CLLLF
Sbjct: 218 AYPDTYNLAGTSGPRMRRRIMQADKSLGRIFFFFMCCVVLCLLLF 249

[Close]

BLAST of CSPI06G10480 vs. TAIR 10
Match: AT4G27470.1 (RING membrane-anchor 3 )

HSP 1 Score: 150.2 bits (378), Expect = 2.2e-36
Identity = 90/219 (41.10%), Postives = 125/219 (57.08%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPVCKAKVSRATL 100
           FDCNICLD+  DPVVTLCGHLFCWPCIYKWLH  +LS+    Q +  CPVCK+ ++  +L
Sbjct: 42  FDCNICLDTAHDPVVTLCGHLFCWPCIYKWLHV-QLSSVSVDQHQNNCPVCKSNITITSL 101

Query: 101 VPIYGKFQTTDASK--AEAPPNLGPAIPRRPLGRHACEAETPASP-TPQLHSDNYSPQSH 160
           VP+YG+  ++ +S   ++    L   IPRRP         T AS   P L     SP  H
Sbjct: 102 VPLYGRGMSSPSSTFGSKKQDALSTDIPRRPAPSALRNPITSASSLNPSLQHQTLSPSFH 161

Query: 161 SYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYPNSY 220
           ++    Q   +    T S   ++++  + ++PVIGMFGD +Y R FG T TN    P   
Sbjct: 162 NH----QYSPRGFTTTESTDLANAVMMSFLYPVIGMFGDLVYTRIFG-TFTNTIAQPYQ- 221

Query: 221 GNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
                      + +MQ ++SL+R+  FF CC+++CLLLF
Sbjct: 222 ----------SQRMMQREKSLNRVSIFFLCCIILCLLLF 243

[Close]

BLAST of CSPI06G10480 vs. TAIR 10
Match: AT4G28270.1 (RING membrane-anchor 2 )

HSP 1 Score: 132.5 bits (332), Expect = 4.9e-31
Identity = 84/222 (37.84%), Postives = 111/222 (50.00%), Query Frame = 0


Query: 41  FDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVE-----CRCPVCKAKV 100
           FDCNICLD V+DPVVTLCGHLFCWPCI+KW +    S QR  Q +      +CPVCK+ V
Sbjct: 19  FDCNICLDQVRDPVVTLCGHLFCWPCIHKWTYASNNSRQRVDQYDHKREPPKCPVCKSDV 78

Query: 101 SRATLVPIYGKFQTTDASKAEAPPN-LGPAIPRRPLGRHACEAETPASPTPQLHSDNYSP 160
           S ATLVPIYG+ Q    S +  P    GP    R +G+   E E+               
Sbjct: 79  SEATLVPIYGRGQKAPQSGSNVPSRPTGPVYDLRGVGQRLGEGES--------------- 138

Query: 161 QSHSYYAQTQNDVQNEYITSSMLSSSSITTNIIHPVIGMFGDTIYARTFGNTTTNLYTYP 220
           Q + Y                          +  PV+G+  + +Y R FG +++N+  Y 
Sbjct: 139 QRYMY-------------------------RMPDPVMGVVCEMVYRRLFGESSSNMAPY- 193

Query: 221 NSYGNVSNSSVRLRRHIMQADESLSRICFFFFCCLVICLLLF 257
                  + +VR RR  MQA+ESLSR+  F  C + +CL LF
Sbjct: 199 ------RDMNVRSRRRAMQAEESLSRVYLFLLCFMFMCLFLF 193

[Close]

BLAST of CSPI06G10480 vs. TAIR 10
Match: AT1G19310.1 (RING/U-box superfamily protein )

HSP 1 Score: 105.9 bits (263), Expect = 4.9e-23
Identity = 49/110 (44.55%), Postives = 67/110 (60.91%), Query Frame = 0


Query: 31  SDAEDEASHGFDCNICLDSVQDPVVTLCGHLFCWPCIYKWLHCKKLSAQRCQQVECRCPV 90
           +D  +  S  F+CNICLD  QDP+VTLCGHLFCWPC+YKWLH    S          CPV
Sbjct: 11  NDTNNNDSSNFECNICLDLAQDPIVTLCGHLFCWPCLYKWLHLHSQSKD--------CPV 70

Query: 91  CKAKVSRATLVPIYGKFQTTDASKAEAPPNLGPAIPRRPLGRHACEAETP 141
           CKA +    LVP+YG+ +++   ++++ P L   +P RP G+    A+ P
Sbjct: 71  CKAVIEEDRLVPLYGRGKSSADPRSKSIPGL--EVPNRPSGQRPETAQPP 110

The following BLAST results are available for this feature:

BLAST of CSPI06G10480 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q6R567	1.2e-53	45.98	E3 ubiquitin-protein ligase RMA1H1 OS=Capsicum annuum OX=4072 GN=RMA1H1 PE=1 SV=...	[more]
O64425	5.0e-41	42.67	E3 ubiquitin-protein ligase RMA1 OS=Arabidopsis thaliana OX=3702 GN=RMA1 PE=1 SV...	[more]
Q8GUK7	3.2e-35	41.10	E3 ubiquitin-protein ligase RMA3 OS=Arabidopsis thaliana OX=3702 GN=RMA3 PE=1 SV...	[more]
P93030	6.8e-30	37.84	E3 ubiquitin-protein ligase RMA2 OS=Arabidopsis thaliana OX=3702 GN=RMA2 PE=1 SV...	[more]
Q5ZIR9	2.8e-15	46.84	E3 ubiquitin-protein ligase RNF185 OS=Gallus gallus OX=9031 GN=RNF185 PE=2 SV=1	[more]

BLAST of CSPI06G10480 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KB39	4.9e-140	97.27	RING-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G128040 P...	[more]
A0A1S3BJB6	3.5e-130	91.80	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo OX=3656 GN=LOC103490524 PE=4 ...	[more]
A0A5A7V6F7	9.7e-112	90.63	E3 ubiquitin-protein ligase RMA1H1 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1CHP4	1.5e-96	72.87	E3 ubiquitin-protein ligase RMA1H1-like OS=Momordica charantia OX=3673 GN=LOC111...	[more]
A0A6J1FXR1	9.4e-91	75.43	E3 ubiquitin-protein ligase RMA1H1-like OS=Cucurbita moschata OX=3662 GN=LOC1114...	[more]

BLAST of CSPI06G10480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004139942.1	1.0e-139	97.27	E3 ubiquitin-protein ligase RMA1H1 [Cucumis sativus] >XP_031742415.1 E3 ubiquiti...	[more]
XP_008448288.1	7.3e-130	91.80	PREDICTED: E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo] >XP_008448289.1 PRE...	[more]
XP_038901529.1	9.0e-112	81.71	E3 ubiquitin-protein ligase RMA1H1-like [Benincasa hispida]	[more]
KAA0062066.1	2.0e-111	90.63	E3 ubiquitin-protein ligase RMA1H1 [Cucumis melo var. makuwa] >TYK04954.1 E3 ubi...	[more]
XP_022140292.1	3.1e-96	72.87	E3 ubiquitin-protein ligase RMA1H1-like [Momordica charantia] >XP_022140293.1 E3...	[more]

BLAST of CSPI06G10480 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G03510.1	3.6e-42	42.67	RING membrane-anchor 1	[more]
AT4G03510.2	3.6e-42	42.67	RING membrane-anchor 1	[more]
AT4G27470.1	2.2e-36	41.10	RING membrane-anchor 3	[more]
AT4G28270.1	4.9e-31	37.84	RING membrane-anchor 2	[more]
AT1G19310.1	4.9e-23	44.55	RING/U-box superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	SMART	SM00184	ring_2	coord: 43..91 e-value: 4.9E-7 score: 39.4
IPR001841	Zinc finger, RING-type	PROSITE	PS50089	ZF_RING_2	coord: 43..92 score: 12.533537
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 24..105 e-value: 1.1E-16 score: 61.9
IPR027370	RING-type zinc-finger, LisH dimerisation motif	PFAM	PF13445	zf-RING_UBOX	coord: 43..88 e-value: 5.3E-7 score: 29.6
IPR045103	E3 ubiquitin-protein ligase RNF5/RNF185-like	PANTHER	PTHR12313	E3 UBIQUITIN-PROTEIN LIGASE RNF5-RELATED	coord: 1..256
None	No IPR available	PANTHER	PTHR12313:SF75	SUBFAMILY NOT NAMED	coord: 1..256
None	No IPR available	CDD	cd16745	RING-HC_AtRMA_like	coord: 41..93 e-value: 1.76267E-22 score: 85.0484
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 37..105
IPR017907	Zinc finger, RING-type, conserved site	PROSITE	PS00518	ZF_RING_1	coord: 58..67

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G10480.1	CSPI06G10480.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0071712	ER-associated misfolded protein catabolic process
biological_process	GO:0016567	protein ubiquitination
biological_process	GO:0006511	ubiquitin-dependent protein catabolic process
cellular_component	GO:0005783	endoplasmic reticulum
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0044390	ubiquitin-like protein conjugating enzyme binding
molecular_function	GO:0061630	ubiquitin protein ligase activity