CSPI06G09380 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G09380
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Metal ion-binding protein, putative
Location	Chr6: 7973849 .. 7974357 (+)
RNA-Seq Expression	CSPI06G09380
Synteny	CSPI06G09380

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAATAAAATAGACTACTTTTAACTTAGATCGTGTCTTTGCAGCAAAAGATAGTGATTCAAGTGTCGATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGTAATTAAAAACTATTATATATATATATATATATATTTATAACATAACTATAATCTATATTGATATAACTAATTAGTTTACAATGGAAATTACAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAACTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGATTTATGCTTTCCACCACCAAAACT

mRNA sequence

AAATAAAATAGACTACTTTTAACTTAGATCGTGTCTTTGCAGCAAAAGATAGTGATTCAAGTGTCGATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAACTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGATTTATGCTTTCCACCACCAAAACT

Coding sequence (CDS)

ATGAAAAGGGGGCCCAAGTACCGCAGCAAAGCCTTGAAGATTGCAGCATCTGTCAAAGGGAGCATTGAGACAATTAGCTTGGTAGGAGACCATAAAGATAAAGTGGAGGTAGTTGGAGATTTAGATCCCATAGAACTCACTGAACTGCTAAGGAAGGGTTTCGGTTCCGCACAGTTGGAGTCAGTGAGCGCAGTTGAAGATAAAGAGAAAAAGAAAGATAAAGACGATGGCATAACATGGACATGCTCGTGGGGAGTGCCTCATCATTCATCTTATTGCTATTGCTACAACCTTCGCCCCTACCCTTCCCATTCCATATGGTGA

Protein sequence

MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLESVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW*

Homology

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BLAST of CSPI06G09380 vs. ExPASy TrEMBL
Match: A0A0A0KAU7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1)

HSP 1 Score: 225.3 bits (573), Expect = 1.2e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE
Sbjct: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 70

Query: 61  SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW
Sbjct: 71  SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]

BLAST of CSPI06G09380 vs. ExPASy TrEMBL
Match: A0A5A7UY93 (Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold264G001130 PE=4 SV=1)

HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47
Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DPIELTELLRKGFGSAQLE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 61  SVSAVEDKEKKKD----KDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSI 107
           +V+AVEDK+K KD    KD GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 110

[Close]

BLAST of CSPI06G09380 vs. ExPASy TrEMBL
Match: A0A1S3BIE5 (uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=4 SV=1)

HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DP+ELTELLRKGFGSAQLE
Sbjct: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELLRKGFGSAQLE 70

Query: 61  SVSAVEDKEKKKD----KDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSI 107
           +V+AVEDK+K KD    KD GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 71  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]

BLAST of CSPI06G09380 vs. ExPASy TrEMBL
Match: A0A6J1FYA9 (uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC111449069 PE=4 SV=1)

HSP 1 Score: 164.1 bits (414), Expect = 3.3e-37
Identity = 84/114 (73.68%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRG KYRS+ALKIAASV G IETISLVGD KDK+EVVGDLDPIELTE+LRK FG AQLE
Sbjct: 11  MKRGAKYRSQALKIAASVLGDIETISLVGDDKDKIEVVGDLDPIELTEMLRKRFGCAQLE 70

Query: 61  SVSAV----EDKEKKKDKDDG---ITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SVS V    ED++  KDKD+    ITWTCSWGVPH + YCYCY+  PYPS+SIW
Sbjct: 71  SVSVVEAKKEDEDVNKDKDENEPQITWTCSWGVPHQTPYCYCYHC-PYPSYSIW 123

[Close]

BLAST of CSPI06G09380 vs. ExPASy TrEMBL
Match: A0A6J1J992 (uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603 PE=4 SV=1)

HSP 1 Score: 154.1 bits (388), Expect = 3.4e-34
Identity = 82/116 (70.69%), Postives = 89/116 (76.72%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRG KYRS+ALKIAASV G IETISLVGD KDK+EVVGDLDPIEL ++LRK FG AQLE
Sbjct: 11  MKRGSKYRSQALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELIKMLRKKFGCAQLE 70

Query: 61  SVSAV----EDKEKKKDKDDG-----ITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SVS V    EDK K KDKD       ITW CS GVPH + YCYCY+  PYPS+SIW
Sbjct: 71  SVSVVEVKNEDKNKDKDKDKNENEPQITWMCSSGVPHQTPYCYCYH-GPYPSYSIW 125

[Close]

BLAST of CSPI06G09380 vs. NCBI nr
Match: XP_004140067.1 (uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical protein Csa_005620 [Cucumis sativus])

HSP 1 Score: 225.3 bits (573), Expect = 2.5e-55
Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE
Sbjct: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 70

Query: 61  SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW
Sbjct: 71  SVSAVEDKEKKKDKDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 117

[Close]

BLAST of CSPI06G09380 vs. NCBI nr
Match: KAA0060862.1 (putative Heavy metal transport/detoxification superfamily protein [Cucumis melo var. makuwa] >TYK01088.1 putative Heavy metal transport/detoxification superfamily protein [Cucumis melo var. makuwa])

HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47
Identity = 97/110 (88.18%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DPIELTELLRKGFGSAQLE
Sbjct: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPIELTELLRKGFGSAQLE 60

Query: 61  SVSAVEDKEKKKD----KDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSI 107
           +V+AVEDK+K KD    KD GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 61  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 110

[Close]

BLAST of CSPI06G09380 vs. NCBI nr
Match: XP_008448137.1 (PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo])

HSP 1 Score: 196.8 bits (499), Expect = 9.5e-47
Identity = 96/110 (87.27%), Postives = 102/110 (92.73%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIAASVKGSIETISLVGD KDKVEVVGD+DP+ELTELLRKGFGSAQLE
Sbjct: 11  MKRGPKYRSKALKIAASVKGSIETISLVGDDKDKVEVVGDIDPMELTELLRKGFGSAQLE 70

Query: 61  SVSAVEDKEKKKD----KDDGITWTCSWGVPHHSSYCYCYNLRPYPSHSI 107
           +V+AVEDK+K KD    KD GITWTCSWGVPHHSSYCYCYNL PYPS+SI
Sbjct: 71  TVNAVEDKDKDKDKDKNKDGGITWTCSWGVPHHSSYCYCYNLGPYPSYSI 120

[Close]

BLAST of CSPI06G09380 vs. NCBI nr
Match: XP_038900437.1 (uncharacterized protein LOC120087662 [Benincasa hispida])

HSP 1 Score: 182.2 bits (461), Expect = 2.4e-42
Identity = 90/109 (82.57%), Postives = 99/109 (90.83%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRGPKYRSKALKIA+SVKG++ETISLVGD KDKVEVVGDLDPIELT+LLRK FGSAQLE
Sbjct: 11  MKRGPKYRSKALKIASSVKGNVETISLVGDDKDKVEVVGDLDPIELTKLLRKSFGSAQLE 70

Query: 61  SVSAVEDKEKKKDKDD--GITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SV+AVE+K+K KDKD   GITWTC+WGVPH SS CYCY L PYPS+SIW
Sbjct: 71  SVNAVEEKDKDKDKDKELGITWTCTWGVPHQSSQCYCY-LGPYPSYSIW 118

[Close]

BLAST of CSPI06G09380 vs. NCBI nr
Match: KAG7010798.1 (Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 167.5 bits (423), Expect = 6.1e-38
Identity = 85/114 (74.56%), Postives = 94/114 (82.46%), Query Frame = 0


Query: 1   MKRGPKYRSKALKIAASVKGSIETISLVGDHKDKVEVVGDLDPIELTELLRKGFGSAQLE 60
           MKRG KYRSKALKIAASV G IETISLVGD KDK+EVVGDLDPIELTE+LRK FG AQLE
Sbjct: 11  MKRGAKYRSKALKIAASVSGDIETISLVGDDKDKIEVVGDLDPIELTEMLRKRFGCAQLE 70

Query: 61  SVSAV----EDKEKKKDKDDG---ITWTCSWGVPHHSSYCYCYNLRPYPSHSIW 108
           SVS V    ED++  KDKD+    ITWTCSWGVPH ++YCYCY+  PYPS+SIW
Sbjct: 71  SVSVVEAKKEDEDMNKDKDENEPQITWTCSWGVPHQTAYCYCYHC-PYPSYSIW 123

The following BLAST results are available for this feature:

BLAST of CSPI06G09380 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G09380 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAU7	1.2e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G113600 PE=4 SV=1	[more]
A0A5A7UY93	2.1e-47	88.18	Putative Heavy metal transport/detoxification superfamily protein OS=Cucumis mel...	[more]
A0A1S3BIE5	4.6e-47	87.27	uncharacterized protein LOC103490424 OS=Cucumis melo OX=3656 GN=LOC103490424 PE=...	[more]
A0A6J1FYA9	3.3e-37	73.68	uncharacterized protein LOC111449069 OS=Cucurbita moschata OX=3662 GN=LOC1114490...	[more]
A0A6J1J992	3.4e-34	70.69	uncharacterized protein LOC111484603 OS=Cucurbita maxima OX=3661 GN=LOC111484603...	[more]

BLAST of CSPI06G09380 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140067.1	2.5e-55	100.00	uncharacterized protein LOC101216311 [Cucumis sativus] >KGN46623.1 hypothetical ...	[more]
KAA0060862.1	4.2e-47	88.18	putative Heavy metal transport/detoxification superfamily protein [Cucumis melo ...	[more]
XP_008448137.1	9.5e-47	87.27	PREDICTED: uncharacterized protein LOC103490424 [Cucumis melo]	[more]
XP_038900437.1	2.4e-42	82.57	uncharacterized protein LOC120087662 [Benincasa hispida]	[more]
KAG7010798.1	6.1e-38	74.56	Heavy metal-associated isoprenylated plant protein 46, partial [Cucurbita argyro...	[more]

BLAST of CSPI06G09380 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	3.30.70.100		coord: 2..68 e-value: 9.3E-17 score: 63.0
None	No IPR available	PANTHER	PTHR46371:SF7	HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 46	coord: 4..76
IPR044296	Heavy metal-associated isoprenylated plant protein 16/46/47	PANTHER	PTHR46371	OS04G0464100 PROTEIN	coord: 4..76

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G09380.1	CSPI06G09380.1	mRNA