CSPI06G09230 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTTTTGTTTATCAATTAAAATTGTGTAATATGTAGAGCTCAAGACATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATTATTGGGTATCTAACCTAAGTCCATGTTTCTTTAACTTGGGTTTGCTTCTTTTTTCTTTTCTTCTTCTTCTTCATATCTTGCCTTTACTCTGATGACTTATGTTTTGTCTCTTCTTTTCACTTGCTGATTCTTCCGCCTCTTTCTAATTGTATCGACTGTTTTTTGGTTCTTACGATTCAAATTTCCACTGGGTTTTGCTTTGTTTTTTCAGATGGGGAATACCATTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTTGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCAGAGCCCATACTTGAGTTTGCTGTTTGTTTTCTTGAATTTCATCCAACGGATTTCATCTCCCCGGCAGAGGTATACCTTGATTTGTTTCTAAACAATCTGGAATTTGGGTTTTTGTTTGTTTTTCCTCTGTAAAAAAGCCAAAGAAAAAACTTATATGTATGCATGTATTCAACTGGGATTATCTGGTTTGTTTGTCTGGACTATGCTACTTCTGTTTTTAAGATTTTGAAGGGTTAGAGGTTTTTTGTTGTTTTTTTCTTCACTGGGTTCTTTTTTTCTCCCACTTAATGTGACTTCTGGTGTTTAACACAGTAATAGCTAGTGCAAAAGTATTTGTGGCAGAAATAGTTTCTTCTCTTGTTTGGAACTAAGTTCCACTGAATTCATGGATTAAGTACAATTTTTCCTTTTAGTTTCTGAGGACAAAATGATTTGGATTTTCACTCTTGTGTGTTCTTTTTCTCTCTGGAATTCTAACAGTTATTGGGCTTCTTTCGATTACATTATGTGCTATCTTTGTTTTTGTTGTTTTTTTCTCTGATATTAGACCATGTTAATTACTTTTTTGAGGTTGGGCAGGCGTTTAGAACTTAAAGGTCATAATACAATGAATAATGAGGAAGTGTCTAACACACCAAGGACATCTGTAAGGATCTCATGGAATCATGGAGGAAAGCAAGTGGCTATTGTTGGGTCATGGGATAATTGGGAGACAAGGTACAACTTTGAAGTGAAGATGTTTGATTTTAAACTCTTTTTTTTTTTTTTTTTTTTTTTTTTTTGTCTAATATAGAACGTTTCATCTCCTTCTGTTAGTGAGGTCTTACAAAGCATAGGAAAAGAATTTATTACTATCAAGACACTTTCATCGGGGATCTACCATTATCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCGTGGGTTTCTGATGATGCAGGAAATTCATACAATATTCTGGACTTGATGGTAATTCACGACTTTGATGTTATCTGTTAAGATTATTGACACCCCATATTTGATATATCTAATAGCTTATAGATTTAGGATCTGTTTGGAATGACTTGAGATTCGAGAAAGAAGTGGTTTCTTAAAAACTCATTTTTATTTAAACTCTTTTGATAAAAACTGTAAAACATATTTTGATAGTGTTTCAAAAGCTATTTTGAGTGCTTGTCAAGACTCCAATTTCGTTTTTCTAAAATGACTTATTTTAAATTAAACACTTGAAAACAAATACACCCTTGGTTACTTGGGAGATTATATGGGCTGACCCTATGTTTCTTTTTTTCTTTTTTTTCATAAAAAAAATGATTTGATGGTTTTATGTTTGCTTTCTACCAAATTCTATGTACAAAAGGTGGTGTTGGGTTACATTCACTGCTAAAACTTATTACAATTTACACAAGCTTTACAATGAAAATAAATAGTTATAGCTTCTAGTCTACCCTTTTTGTTGACTTGGATGCATGACATCTGCTCAATGATTCGTTCGTAGATTTCATAGAAAGTTGATAAAGGAAATAACTCAATGTAAAGATTGTCCAAAAGAATGCCTTTTTATTTTTTCAGATGGGATCAGTGGTCTTTGCATGATTCCCTGACTATGTCCTTGAAGAGATATTTGCTTTTGCCTGACCTTTCCCCTAAATATCCAACTTTGACTGAGTTTTAGAGTTCCCAATTTAATTGCTTTGTTTGAAAGATCAGGGCACCTACCAAAATGAAAAATGTGTGTGTGTGTGGGATGAAACAGTTAAGTTTGCAACTTATTCTTATTTTATTTCTTATCAAAACCACTTTATGTGGACTGTTTGGTTAAGATTTTTGGTTGATAAGAGTGCATTTAGACATGATGGAATGTTTTGGAATTGAGGGGCTTAGAAAAGGCAAACTAAGGTTTAGTTGTGTATATGTAATATATGAGCATTGAAAGCCCAGGTTCTTTAATGGGTTACCAATTAATTTTGGATGCTCAAGTATGAAAGATTGAAAGCGAGAAACAAATCTAGGCTTCTAGTTTTTCTGTTAAGTTCTGCTGATCGAAGAGGCCCTGATGCTTCTATCATTAGTTTTGACTCTTCTTTATTGCCACTCTTTGTTAATTATGGTTAATTGGATCTGAATAAGAGCTCTTTGTCTGCCCCGTACTAATTTGAATTTATTATTGAAATTGTCTTACAGACACCTGCCTCAGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCTCCATCTAGTTATGATAACCAATGTTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGTTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTATGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGATTAGACTTTGGTCAACTGTTTTTCCCACCTCTAAATTTGTGGCCTACCCTTCTGTATTTCAACCTCGTAGCTGGGATTAAATGAGCAATGATTATTTATGTGAAGATTGTTATACTAATAGATTGAAGAGAGCTTGAAATAGAATTCTTTTCCATATGTTTTAATATCTGTTCATTGTGGATCCGATTCTCTGTTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTATTTCAAAGCTTACTTTCATGTATTGTTTCCTTGAAAGAAGTGGAAAGTCCTAGCGACCATGCATTTGAAGGTACTTATTTCGATGTAGCAAGAGATCGGCTGTTAGATCTAAAGAGGATTCAGCTACTAGGATATGTAAACTCTATTTTCCTTTTTCCTTTTGTGCAGTATGTTTCGAACCATTGGAATGGAAATGTTGAACCGATTAAATTGTTCCAAGGTGTTTCTGCATCTTCTCGATGTCATCTTCGTTTTCTATATTGCAATGGAATTCTACCTTCTTTTACATGTTCTTTTTCCTTTTTCTTTTGAACGGTTCATTTCCTTATGTAAATTTGAATTTTTCGCTTCTCTTCATTTCCTCATTGAACTTTGGTGTGTCTTCATGAAATTAATATCTCAAATTGCTGCAGAACCACAAGACACGGAGGTGAGGTAGGATTCAAACCTCCAAACTCGAGAACATGAATAGCTGTCTTTAACTGCTAAGCTGCGAAGGTGGCAGCAGCGGTAGTCAATATTTCATGCATTTTCCTGGTTTATTATTACTATTTTTCATTTGTTTGTGATTCCAAACATATTACTCAAAGCTACCAACAACAAATACTTGTATTGAAATGGAGGGAAAAGGAATCCAAGCACTCAAAACAGCGAAAATTAATTAAGTTACTATACTTTGTATTAATTTCTGAAATAACATAACAACTCAAAAC CTTTTTGTTTATCAATTAAAATTGTGTAATATGTAGAGCTCAAGACATGGTGCGTTCATTTCTTCACTCAATTCTCGATTTGGGTGCTTCTTTTTCTGCAATTCATCCTCATTATTGGATGGGGAATACCATTTTGCTGAATTGAATTATGAGAACACGAAGAAGTGTTGAGAAGCAATTTTTTTGGTATCCTGCTCATAGGTTTTCAGAGCCCATACTTGAGTTTGCTGTTTGTTTTCTTGAATTTCATCCAACGGATTTCATCTCCCCGGCAGAGGCGTTTAGAACTTAAAGGTCATAATACAATGAATAATGAGGAAGTGTCTAACACACCAAGGACATCTGTAAGGATCTCATGGAATCATGGAGGAAAGCAAGTGGCTATTGTTGGGTCATGGGATAATTGGGAGACAAGTGAGGTCTTACAAAGCATAGGAAAAGAATTTATTACTATCAAGACACTTTCATCGGGGATCTACCATTATCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCGTGGGTTTCTGATGATGCAGGAAATTCATACAATATTCTGGACTTGATGACACCTGCCTCAGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCTCCATCTAGTTATGATAACCAATGTTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGTTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTATGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGATTAGACTTTGGTCAACTGTTTTTCCCACCTCTAAATTTGTGGCCTACCCTTCTGTATTTCAACCTCGTAGCTGGGATTAAATGAGCAATGATTATTTATGTGAAGATTGTTATACTAATAGATTGAAGAGAGCTTGAAATAGAATTCTTTTCCATATGTTTTAATATCTGTTCATTGTGGATCCGATTCTCTGTTCCTTTTTTTTTTTGTTTTTTGTGTGTGTGTATTTCAAAGCTTACTTTCATGTATTGTTTCCTTGAAAGAAGTGGAAAGTCCTAGCGACCATGCATTTGAAGGTACTTATTTCGATGTAGCAAGAGATCGGCTGTTAGATCTAAAGAGGATTCAGCTACTAGGATATGTAAACTCTATTTTCCTTTTTCCTTTTGTGCAGTATGTTTCGAACCATTGGAATGGAAATGTTGAACCGATTAAATTGTTCCAAGAACCACAAGACACGGAGGTGAGGTAGGATTCAAACCTCCAAACTCGAGAACATGAATAGCTGTCTTTAACTGCTAAGCTGCGAAGGTGGCAGCAGCGGTAGTCAATATTTCATGCATTTTCCTGGTTTATTATTACTATTTTTCATTTGTTTGTGATTCCAAACATATTACTCAAAGCTACCAACAACAAATACTTGTATTGAAATGGAGGGAAAAGGAATCCAAGCACTCAAAACAGCGAAAATTAATTAAGTTACTATACTTTGTATTAATTTCTGAAATAACATAACAACTCAAAAC ATGAATAATGAGGAAGTGTCTAACACACCAAGGACATCTGTAAGGATCTCATGGAATCATGGAGGAAAGCAAGTGGCTATTGTTGGGTCATGGGATAATTGGGAGACAAGTGAGGTCTTACAAAGCATAGGAAAAGAATTTATTACTATCAAGACACTTTCATCGGGGATCTACCATTATCGCTTCATGGTTGATGGATGGTTGACATGTGCTCCTGATTTGCCGTGGGTTTCTGATGATGCAGGAAATTCATACAATATTCTGGACTTGATGACACCTGCCTCAGAATTGCCTGAAAGTCTTTCTGAGTTTGAATTTCCTCCATCCCCTCCATCTAGTTATGATAACCAATGTTTCAACGACGATGATTTCAGTAGGCCTCCACCGGATCTACCGCCACAACTGCGAGAGACTGTTTTGAATGAACCATCTTGCTGCACAAGTGGTCATCAGTCCGTTGTGCAGCCTCGACACACTGAATTAAATCATTTATACCAAAATAATGTTGGAGGTGAATTCATGGCACTTGGTTCAACATTCAAGTTTTATGAAAAATATGTCACAATGTTACTTTTCAAGCCCTTGCTGAAAAGAAATTGA MNNEEVSNTPRTSVRISWNHGGKQVAIVGSWDNWETSEVLQSIGKEFITIKTLSSGIYHYRFMVDGWLTCAPDLPWVSDDAGNSYNILDLMTPASELPESLSEFEFPPSPPSSYDNQCFNDDDFSRPPPDLPPQLRETVLNEPSCCTSGHQSVVQPRHTELNHLYQNNVGGEFMALGSTFKFYEKYVTMLLFKPLLKRN* Homology
BLAST of CSPI06G09230 vs. ExPASy Swiss-Prot
Match: Q9SCY5 (SNF1-related protein kinase regulatory subunit beta-2 OS=Arabidopsis thaliana OX=3702 GN=KINB2 PE=1 SV=1) HSP 1 Score: 178.7 bits (452), Expect = 6.5e-44 Identity = 91/194 (46.91%), Postives = 122/194 (62.89%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy Swiss-Prot
Match: Q84VQ1 (SNF1-related protein kinase regulatory subunit beta-1 OS=Arabidopsis thaliana OX=3702 GN=KINB1 PE=1 SV=1) HSP 1 Score: 151.0 bits (380), Expect = 1.4e-35 Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy Swiss-Prot
Match: O43741 (5'-AMP-activated protein kinase subunit beta-2 OS=Homo sapiens OX=9606 GN=PRKAB2 PE=1 SV=1) HSP 1 Score: 105.5 bits (262), Expect = 7.0e-22 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy Swiss-Prot
Match: Q6PAM0 (5'-AMP-activated protein kinase subunit beta-2 OS=Mus musculus OX=10090 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 105.1 bits (261), Expect = 9.1e-22 Identity = 61/192 (31.77%), Postives = 96/192 (50.00%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy Swiss-Prot
Match: Q9QZH4 (5'-AMP-activated protein kinase subunit beta-2 OS=Rattus norvegicus OX=10116 GN=Prkab2 PE=1 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 2.0e-21 Identity = 61/192 (31.77%), Postives = 95/192 (49.48%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy TrEMBL
Match: A0A0A0KFT8 (AMPKBI domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G112450 PE=3 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.6e-114 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy TrEMBL
Match: A0A1S4E4K9 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo OX=3656 GN=LOC103502112 PE=3 SV=1) HSP 1 Score: 416.0 bits (1068), Expect = 8.9e-113 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy TrEMBL
Match: A0A5D3CKW7 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G001460 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 4.4e-112 Identity = 195/199 (97.99%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy TrEMBL
Match: A0A5A7V520 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold137G00180 PE=3 SV=1) HSP 1 Score: 413.7 bits (1062), Expect = 4.4e-112 Identity = 195/199 (97.99%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CSPI06G09230 vs. ExPASy TrEMBL
Match: A0A6J1J923 (SNF1-related protein kinase regulatory subunit beta-2-like OS=Cucurbita maxima OX=3661 GN=LOC111483696 PE=3 SV=1) HSP 1 Score: 391.7 bits (1005), Expect = 1.8e-105 Identity = 180/199 (90.45%), Postives = 189/199 (94.97%), Query Frame = 0
BLAST of CSPI06G09230 vs. NCBI nr
Match: XP_011656884.1 (SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >XP_011656885.1 SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >XP_031743665.1 SNF1-related protein kinase regulatory subunit beta-2 [Cucumis sativus] >KGN46606.1 hypothetical protein Csa_004997 [Cucumis sativus]) HSP 1 Score: 421.8 bits (1083), Expect = 3.3e-114 Identity = 199/199 (100.00%), Postives = 199/199 (100.00%), Query Frame = 0
BLAST of CSPI06G09230 vs. NCBI nr
Match: XP_016903157.1 (PREDICTED: SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo]) HSP 1 Score: 416.0 bits (1068), Expect = 1.8e-112 Identity = 196/199 (98.49%), Postives = 197/199 (98.99%), Query Frame = 0
BLAST of CSPI06G09230 vs. NCBI nr
Match: KAA0060799.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 413.7 bits (1062), Expect = 9.1e-112 Identity = 195/199 (97.99%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CSPI06G09230 vs. NCBI nr
Match: TYK11962.1 (SNF1-related protein kinase regulatory subunit beta-2-like [Cucumis melo var. makuwa]) HSP 1 Score: 413.7 bits (1062), Expect = 9.1e-112 Identity = 195/199 (97.99%), Postives = 196/199 (98.49%), Query Frame = 0
BLAST of CSPI06G09230 vs. NCBI nr
Match: XP_038902665.1 (SNF1-related protein kinase regulatory subunit beta-2-like isoform X2 [Benincasa hispida]) HSP 1 Score: 397.9 bits (1021), Expect = 5.2e-107 Identity = 185/199 (92.96%), Postives = 191/199 (95.98%), Query Frame = 0
BLAST of CSPI06G09230 vs. TAIR 10
Match: AT4G16360.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.6e-45 Identity = 91/194 (46.91%), Postives = 122/194 (62.89%), Query Frame = 0
BLAST of CSPI06G09230 vs. TAIR 10
Match: AT4G16360.3 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 178.7 bits (452), Expect = 4.6e-45 Identity = 91/194 (46.91%), Postives = 122/194 (62.89%), Query Frame = 0
BLAST of CSPI06G09230 vs. TAIR 10
Match: AT4G16360.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 177.2 bits (448), Expect = 1.3e-44 Identity = 92/194 (47.42%), Postives = 123/194 (63.40%), Query Frame = 0
BLAST of CSPI06G09230 vs. TAIR 10
Match: AT5G21170.1 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.0e-36 Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = 0
BLAST of CSPI06G09230 vs. TAIR 10
Match: AT5G21170.2 (5'-AMP-activated protein kinase beta-2 subunit protein ) HSP 1 Score: 151.0 bits (380), Expect = 1.0e-36 Identity = 79/184 (42.93%), Postives = 109/184 (59.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|