CSPI06G09000 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G09000
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	heterogeneous nuclear ribonucleoprotein 1
Location	Chr6: 7569942 .. 7574512 (-)
RNA-Seq Expression	CSPI06G09000
Synteny	CSPI06G09000

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCCTCCCGTAAGTTTCTTAGTAAAGATCAAAATTAAAAGAAAAAAAAAGGAAAAAAAATTATAAAAGGAAAGTGAGAGAAAATCTTCATCTTCCAGTTTCAAAGTTCTTATACATTTCTCACGCTAGACACCTTCAAGCTTCTGTTTTTTCACGTTCTCTTTGTTAGTGTACAGTTTTGTTTAAACATAAATAGAATTTCCCGATCTGCTTGGTAACTGAATTTGCTTTCGCATAATCAATCTCAAACACAACAATTCTGAAAGGCTTAAAAGCAAAGTTTGTGGTTTCAACCAACATATTTACACACAGAACAGAAGAAGAACAAGAAGGTTGAAGATGTCTCTCCTTATCATCCTCCATCCTCTCAGATCTTAGCTTTTCAAGATTTGGCTTTCTGGGTCTTCGCTAATCGGTCCGTTTTATGGGAATCTCCACTTTATTTTTCGATCTTCTCTGGAATTCTATTAACTTTGGATCCCCTTATTCCTTCTTTTTTGATTCAAATGCTTTCTGGGTTTTCTCAGGTTTGTTGAATTTTGGTCGAACCATTGATCGACGATGGATCCAGTGTTTCCAAATTGATTTATTTTTATTATCTCCTCTCTTGGGATATACATTTCCTCGATTGTCTCTTTGATTCAAAATAAAGGTACTGCTTCTCTTATTGATTTGTCATTCACCCGCATTTGATTCCATTTCCTTCTTCTCTTTCACCTTCAAGAGGTTACAGATTACAATTCTTCTTCTTATCTTTGTACACCGATCTTCTACTATAATGAATCCTCATACCTGATTTTATTCCCTTCATTTCATTTCTACATCACTCTCCTTAAAATTCGATCTTCAGCTCTGCAATGGATGTTCGGGAATTTAGATTTCTGTTGTGTTTTTTTTCCTTATCTGAATCGACTAGAAATGTATGGATGCTATCTGCATTTGATGGGTTTTGGACATCTCAATGATATATGGCTTCTGTTGCTGTGGTATGTAGGAAAAGGAAAATGCAAACTGATAGTGGCAAATTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGACCGTCTTAAAGAGTATTTCAATGCATATGGTGATGTTGTAGAAGCTGTCATTATGAAGGATCGGACCACAGGTCGTGGTCGAGGCTTTGGCTTCATTGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTGAGTTTGTTAACCTCAAATGTGTTTCTTTGGACCTGCAGAGATAGCTCATTTCTTATTAGCTCGTGATTCGTAATGTATTGCTGAGCCGTTTATTTTTCATCCTTGGTGAAATTTCTAATTGTCTGAGGATTGAAAGTTCTTTTCCTGATTAGTTTCTCAGCTTGACTTCAATCACTATAGTCTGCATTTGCCATTTTAAGGCTATTTGAACTCGACCTTCATTCTTCAATTTTCTTCATCCTCAGGTTGAGGCTAAAAGGGCTGTTCCTAGGAATGATCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTCGAAAGATATTTGTTGGGGGGTTAGCATCTACTGTTACAGAAAGTGAATTCAAGAATTATTTTGATCAATTCGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCTGAAGAAGCAGTAGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGCAAAATGGTTGAAGTCAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGCCCCAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTTAATAGCTTCCTTAATGGTTACACTCAGGGTTACAGTTCAAGTACAATTGGAGGCTATGGTGTTAGAGTGGATGGGAGATTTAGTCCAGTTTCCAGTGGTCGAAGTGTATTCACCCCATTTGGTTCAGGTTATGGAATGGGTGTGAACTTTGATATTGGCTTAAACCCAGGGTATGGGGGAAATTCTAATTTCGCCAGTAATCTCAACTATGGACGGGGACTGAGCCCTTATTATACTGGTAACTCAGATAGATTTGGCAATATAGGGTATGAAAGTGGCAATGGAGGAAACTCGTCCTTCTTCAGCTCAGAAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAACTGGTGGCAGCGTTGGGGGAACTGGATTTGCCAATTCTGGAGTTAGCTGGGGTAGTTCGGGAATCTCGTCTCAAGGTGGAGGAAACAATGTTTTTAGTAACTCTGGGAATCTTAATTATGGAGGTGTTGATAGTAGTTATAGTCTAGGAGCTGGAGGGTATGGGAGAAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGTCCCTTTGCTGATTTCTACAGTGCCGGTTATGGTGATCCCACGTGGCGTTCTTCCAACTTTGAAAGAGATGGATCTGGACCCTTTGGTTATGGGCTCGGCAGTGCTGCTTCGGATGTCTCAGCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGTTAGAGCCACTGTTTCAAAATTTATACAATGCCTCATTCATTATTTCAATAGTATCTCCTGATTTCTCTTATGAGAAATTTTGTTTTCCAAATGCTCCGATTATGAACAACCAATTGTAGAATTATATTTTTATTGATCTTGCAGAAAGTTGTCATAGCATCATCATCCATGCTAATTCTGCATTTGATGATCTAGATATTAGCTCATTTTGATACTAAATCACAATTATTTAGTTGCTAACCGAGCAAATTTATAATGTCTAGTTGGCTGAGCTGTGTATACATTTTCTTTTACACTCAGTGTGGGAATGATATATGTTCAGTATGTGTCTGGTACAGCTGAAATGTGACATAGTATATTGTAAGAATATTTAGAGTTAGCTCCCAATGAACCTTTTTTGGTTGCCTGGATCTTGTTTCCAGGAACACGCTGTCTAAGGAATTAAAACACCATGTTGGTTTTGGCTGAGGTAGCACTCTTCTATAGTTGTTTTCTTGGGATTACTGGAAAAAGAAGGGAACAAGAGTAACTTATATAGTCATACTAATTGAATTTACTGAGTTATATAAATGAAGGGCATTCAAATATCAAACTTGCATAAACTACTCAACTGATCTTTTTTTTTTTTTTCAATGGAAAGGTGATTTCTCTCACTTTCACTACCTTGCATTTGGTGATTGAATTTTTATGGGTCCTGTACATAACCTCTGTGTTCACATGCACACATATGCTTGCAAACCTGCAATTGTGCAGCTCTCTCGTTTAAACTTGACAAGCTCAAGCATTTGGCTAGTTCTAGATCATCATAAATGTTTAACAACCTCATGCTTGTTGAATTCTCCTTGTCCATATATGAAAAAACTTGGATGTTTCTTTCTAGGCTCATTATCACTCAAAGAGACAAACTACTACTCTAATTATGCATTTACAATGTCCTAAAATATATCCCTTTTCATTTTATCATGTGACTATTGAGGCATCGATTATATTTAGTACAGCCTTTTAAAATGTTTTAATTAACGAGTGTTACCCAAAATCACAAAATGGCATCAGATAATCTGTGATGTTGAATTGAAGTTTAGGATAATGAAGCTGTTAACCAAGACACACTACGGTGTTGTGTATCACTACGTCATTTCGTGTTAAATGCTCTGGTCATATAGTGTTATTCTTTTCCTCCTTTTATTTGTTGCCTATCTGATGAAAAGAAAATGGAGTGATAATATTCTCTGGTATTAATTGTCAAAAGCAGATTGTTAGATACTCAATCTCCTCGTTTTTTGCTTCAGGAAACACTACCTAGGAATGATCGGATATGTCGACATAGTAGATGAAGATAATTGGTGAAGCATATGAAGTTGCGGACCAATCAATAGAATATTCAGTTCAATTACCCAACAAAAAGGAAAAAAAGGGGAAAAGAAAGAAGAATTATCTAAAGCTAACTGAGTGCCGATGCTGAGAACCAAGCTTAGAGGTATTTAGCCACTTGGGATTTTGTGTTCAGGTTTGAGTTTTGATTAGAAATTTTTCTTTTGGTTTTGTTTTTTTTTTCTTCTTATATTTGAGTGAGATGTAAAATCAGATTGCGGCAGTATAGCAAAATACGTATCATCATGCATCTTCAGTGAGGTGGGGATCCACAAAGTTATAGACTATGCCTTGTTTTTTATTTAAGGTCAATCTTTTTAATTTTTAAAGTTCATCATAATTGTAGCAGTAATACCGGAGGCAAAGTTGTGAGCTTTGTTTAGGAATACTGTTTGTCCCATCATTTTGGTTTGTTTTTGAACAAATTTGTATCAGAGTTCCTCTTTTTTTGTTGAATTGTTAGTGTGAAAAACATTCAAGGGATATCCATCTAGGCTCTCCCTATGAATAAATAACCACAAATTCTTCGT

mRNA sequence

CTCCTCCCGTAAGTTTCTTAGTAAAGATCAAAATTAAAAGAAAAAAAAAGGAAAAAAAATTATAAAAGGAAAGTGAGAGAAAATCTTCATCTTCCAGTTTCAAAGTTCTTATACATTTCTCACGCTAGACACCTTCAAGCTTCTGTTTTTTCACGTTCTCTTTGTTAGTGTACAGTTTTGTTTAAACATAAATAGAATTTCCCGATCTGCTTGGTAACTGAATTTGCTTTCGCATAATCAATCTCAAACACAACAATTCTGAAAGGCTTAAAAGCAAAGTTTGTGGTTTCAACCAACATATTTACACACAGAACAGAAGAAGAACAAGAAGGTTGAAGATGTCTCTCCTTATCATCCTCCATCCTCTCAGATCTTAGCTTTTCAAGATTTGGCTTTCTGGGTCTTCGCTAATCGGTTTGTTGAATTTTGGTCGAACCATTGATCGACGATGGATCCAGTGTTTCCAAATTGATTTATTTTTATTATCTCCTCTCTTGGGATATACATTTCCTCGATTGTCTCTTTGATTCAAAATAAAGGAAAAGGAAAATGCAAACTGATAGTGGCAAATTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGACCGTCTTAAAGAGTATTTCAATGCATATGGTGATGTTGTAGAAGCTGTCATTATGAAGGATCGGACCACAGGTCGTGGTCGAGGCTTTGGCTTCATTGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCTAAAAGGGCTGTTCCTAGGAATGATCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTCGAAAGATATTTGTTGGGGGGTTAGCATCTACTGTTACAGAAAGTGAATTCAAGAATTATTTTGATCAATTCGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCTGAAGAAGCAGTAGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGCAAAATGGTTGAAGTCAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGCCCCAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTTAATAGCTTCCTTAATGGTTACACTCAGGGTTACAGTTCAAGTACAATTGGAGGCTATGGTGTTAGAGTGGATGGGAGATTTAGTCCAGTTTCCAGTGGTCGAAGTGTATTCACCCCATTTGGTTCAGGTTATGGAATGGGTGTGAACTTTGATATTGGCTTAAACCCAGGGTATGGGGGAAATTCTAATTTCGCCAGTAATCTCAACTATGGACGGGGACTGAGCCCTTATTATACTGGTAACTCAGATAGATTTGGCAATATAGGGTATGAAAGTGGCAATGGAGGAAACTCGTCCTTCTTCAGCTCAGAAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAACTGGTGGCAGCGTTGGGGGAACTGGATTTGCCAATTCTGGAGTTAGCTGGGGTAGTTCGGGAATCTCGTCTCAAGGTGGAGGAAACAATGTTTTTAGTAACTCTGGGAATCTTAATTATGGAGGTGTTGATAGTAGTTATAGTCTAGGAGCTGGAGGGTATGGGAGAAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGTCCCTTTGCTGATTTCTACAGTGCCGGTTATGGTGATCCCACGTGGCGTTCTTCCAACTTTGAAAGAGATGGATCTGGACCCTTTGGTTATGGGCTCGGCAGTGCTGCTTCGGATGTCTCAGCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGAAACACTACCTAGGAATGATCGGATATGTCGACATAGTAGATGAAGATAATTGGTGAAGCATATGAAGTTGCGGACCAATCAATAGAATATTCAGTTCAATTACCCAACAAAAAGGAAAAAAAGGGGAAAAGAAAGAAGAATTATCTAAAGCTAACTGAGTGCCGATGCTGAGAACCAAGCTTAGAGGTATTTAGCCACTTGGGATTTTGTGTTCAGGTTTGAGTTTTGATTAGAAATTTTTCTTTTGGTTTTGTTTTTTTTTTCTTCTTATATTTGAGTGAGATGTAAAATCAGATTGCGGCAGTATAGCAAAATACGTATCATCATGCATCTTCAGTGAGGTGGGGATCCACAAAGTTATAGACTATGCCTTGTTTTTTATTTAAGGTCAATCTTTTTAATTTTTAAAGTTCATCATAATTGTAGCAGTAATACCGGAGGCAAAGTTGTGAGCTTTGTTTAGGAATACTGTTTGTCCCATCATTTTGGTTTGTTTTTGAACAAATTTGTATCAGAGTTCCTCTTTTTTTGTTGAATTGTTAGTGTGAAAAACATTCAAGGGATATCCATCTAGGCTCTCCCTATGAATAAATAACCACAAATTCTTCGT

Coding sequence (CDS)

ATGCAAACTGATAGTGGCAAATTATTTGTTGGTGGAATATCTTGGGATACTGATGAAGACCGTCTTAAAGAGTATTTCAATGCATATGGTGATGTTGTAGAAGCTGTCATTATGAAGGATCGGACCACAGGTCGTGGTCGAGGCTTTGGCTTCATTGTTTTTGCTGATCCAAGTGTTGCAGATAGAGTTATAAGGGAGAAGCATAATATTGATGGAAGAATGGTTGAGGCTAAAAGGGCTGTTCCTAGGAATGATCAGAACATTGTAGGTAGAACCAGTGGTAGCATTAATGTTTCTCCTGGTCCTGGACGAACTCGAAAGATATTTGTTGGGGGGTTAGCATCTACTGTTACAGAAAGTGAATTCAAGAATTATTTTGATCAATTCGGGACAATTACAGATGTTGTGGTGATGTACGACCACAATACTCTTCGACCCAGAGGATTTGGGTTTATTACATATGATTCTGAAGAAGCAGTAGAGAAAGTTCTTATCAAGACTTTCCATGAATTGAATGGCAAAATGGTTGAAGTCAAGCGTGCAGTTCCGAAAGAGTTGTCACCAGGCCCCAGCCGTAGTCCACTTGGTGGATACAATTATGGTCAGAGTAGGGTTAATAGCTTCCTTAATGGTTACACTCAGGGTTACAGTTCAAGTACAATTGGAGGCTATGGTGTTAGAGTGGATGGGAGATTTAGTCCAGTTTCCAGTGGTCGAAGTGTATTCACCCCATTTGGTTCAGGTTATGGAATGGGTGTGAACTTTGATATTGGCTTAAACCCAGGGTATGGGGGAAATTCTAATTTCGCCAGTAATCTCAACTATGGACGGGGACTGAGCCCTTATTATACTGGTAACTCAGATAGATTTGGCAATATAGGGTATGAAAGTGGCAATGGAGGAAACTCGTCCTTCTTCAGCTCAGAAACTCAAAACTTGTGGGGAAGTGGAGGGCTCAACAATGGAACAAACTCTGCCAATTCCAATGCTCATTTGGGATCAGCAACTGGTGGCAGCGTTGGGGGAACTGGATTTGCCAATTCTGGAGTTAGCTGGGGTAGTTCGGGAATCTCGTCTCAAGGTGGAGGAAACAATGTTTTTAGTAACTCTGGGAATCTTAATTATGGAGGTGTTGATAGTAGTTATAGTCTAGGAGCTGGAGGGTATGGGAGAAACAGTGGTACTGTTTTGCCTCCAACATCATCATTTCCTACCTCAACTGTCGGTTTTGACGGTCCCTTTGCTGATTTCTACAGTGCCGGTTATGGTGATCCCACGTGGCGTTCTTCCAACTTTGAAAGAGATGGATCTGGACCCTTTGGTTATGGGCTCGGCAGTGCTGCTTCGGATGTCTCAGCCAGAAGCTCTCCTGGTTTTATTGGTGGTCATAGTGTTAATAGGAGGCAGTCAAACAGAGGAAACACTACCTAG

Protein sequence

MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRSVFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNGGNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSAGYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT*

Homology

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BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 8.4e-66
Identity = 187/448 (41.74%), Postives = 254/448 (56.70%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M +D GKLFVGGISW+TDED+L+E+F  YG+V +A++M+D+ TGR RGFGF++F+DPSV 
Sbjct: 1   MDSDQGKLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVL 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPG-----RTRKIFVGGLAS 120
           DRV++EKH+ID R V+ KRA+ R +Q + GRT G++N S   G     +T+KIFVGGL  
Sbjct: 61  DRVLQEKHSIDTREVDVKRAMSREEQQVSGRT-GNLNTSRSSGGDAYNKTKKIFVGGLPP 120

Query: 121 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 180
           T+T+ EF+ YF+ +G +TDV +MYD  T RPRGFGF+++DSE+AV+ VL KTFH+L+GK 
Sbjct: 121 TLTDEEFRQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQ 180

Query: 181 VEVKRAVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPV 240
           VEVKRA+PK+ +PG     +GG   G         GY QGY  +     G     RF   
Sbjct: 181 VEVKRALPKDANPGGGGRSMGGGGSG---------GY-QGYGGNESSYDGRMDSNRFLQH 240

Query: 241 SSGRSVFTPFG-SGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIG 300
            S  +    +G SGYG           GYG  SN A    YG      YTG++  +G  G
Sbjct: 241 QSVGNGLPSYGSSGYG----------AGYGNGSNGAGYGAYGG-----YTGSAGGYG-AG 300

Query: 301 YESGNGGNSSFFSSETQNLWGSG-GLNNGTNSANSNAHLGSATGGSVG-GTGFANSGVSW 360
             +G G           N+ G+G G + G    NS     S+  G+ G G+G A+SG  +
Sbjct: 301 ATAGYGAT---------NIPGAGYGSSTGVAPRNSWDTPASSGYGNPGYGSGAAHSG--Y 360

Query: 361 GSSGISSQGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNS--GTVLPPTSSFPTSTVGF 420
           G  G +      + +SN G   YGG    YS    GYG  +  G V    S   ++  G 
Sbjct: 361 GVPGAAPPTQSPSGYSNQG-YGYGG----YSGSDSGYGNQAAYGVVGGRPSGGGSNNPGS 401

Query: 421 DGPFADFYSAGYGDPTWRSSNFERDGSG 439
            G    +   GYGD +WRS   +  G G
Sbjct: 421 GG----YMGGGYGDGSWRSDPSQGYGGG 401

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BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot
Match: Q9C652 (RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1)

HSP 1 Score: 187.6 bits (475), Expect = 3.3e-46
Identity = 96/199 (48.24%), Postives = 135/199 (67.84%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M  D  KLFVGGI+ +T E+ LK+YF+ YG V+EAV+ K++ TG+ RGFGF+ FA+    
Sbjct: 1   MDYDRYKLFVGGIAKETSEEALKQYFSRYGAVLEAVVAKEKVTGKPRGFGFVRFANDCDV 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRND-----------QNIVGRTSGSINVSPGPG---RTR 120
            + +R+ H I G+ V+ ++A+ +++           +  V + +G +      G   RT+
Sbjct: 61  VKALRDTHFILGKPVDVRKAIRKHELYQQPFSMQFLERKVQQMNGGLREMSSNGVTSRTK 120

Query: 121 KIFVGGLASTVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIK 180
           KIFVGGL+S  TE EFK+YF++FG  TDVVVM+D  T RPRGFGF+TYDSE++VE V+  
Sbjct: 121 KIFVGGLSSNTTEEEFKSYFERFGRTTDVVVMHDGVTNRPRGFGFVTYDSEDSVEVVMQS 180

Query: 181 TFHELNGKMVEVKRAVPKE 186
            FHEL+ K VEVKRA+PKE
Sbjct: 181 NFHELSDKRVEVKRAIPKE 199

[Close]

BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot
Match: Q98SJ2 (DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1)

HSP 1 Score: 186.4 bits (472), Expect = 7.4e-46
Identity = 115/288 (39.93%), Postives = 157/288 (54.51%), Query Frame = 0


Query: 6   GKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIR 65
           GKLFVGG+ W T ++ L+ YF+ YG+VV+ VIMKD+TT + RGFGF+ F DP+    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGR-TSGSINVSPGP--GRTRKIFVGGLASTVTESE 125
            + H +DGR ++ K   PR  Q    R   G     P     R+ KIFVGG+     E+E
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQPERSRPREGWQQKEPRTENSRSNKIFVGGIPHNCGETE 129

Query: 126 FKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRA 185
            K YF++FG +T+VV++YD    RPRGFGFIT++ E++V++ +   FH++ GK VEVKRA
Sbjct: 130 LKEYFNRFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKRA 189

Query: 186 VPKELSPGPSRSPLGGYNYGQSRVNSFLNGYT-------QGYS--------SSTIGGYGV 245
            P++ S   +  P G   +G   + S  NG+T       QGYS          TIGGYG 
Sbjct: 190 EPRD-SKSQTPGPPGSNQWGSRAMQSTANGWTGQPPQTWQGYSPQGMWMPTGQTIGGYG- 249

Query: 246 RVDGRFSP----------VSSGRSVFTP---FGSGYGMGVNFDIGLNP 262
           +  GR  P          VS+    F P   F  GY     F  G  P
Sbjct: 250 QPAGRGGPPPPPSFAPFLVSTTPGPFPPPQGFPPGYATPPPFGYGYGP 295

[Close]

BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 184.1 bits (466), Expect = 3.7e-45
Identity = 78/181 (43.09%), Postives = 124/181 (68.51%), Query Frame = 0


Query: 4   DSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRV 63
           + GK+F+GG++W+T +D L++YF  +G+V++  +M+D TTGR RGFGF+ F +P   + V
Sbjct: 161 EDGKMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEV 220

Query: 64  IREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTESEFK 123
           + ++H++DG++++ KRA+PR +Q                 +T K+FVGG+    TE EF+
Sbjct: 221 MSKEHHLDGKIIDPKRAIPREEQE----------------KTAKMFVGGVPGDCTEEEFR 280

Query: 124 NYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKRAVP 183
           N+F+QFG + D  +M D +T RPRGFGF+TY++E AVE  + + +  ++GK VEVKRA P
Sbjct: 281 NFFNQFGRVLDATLMMDKDTGRPRGFGFVTYENESAVEATMSQPYITIHGKPVEVKRATP 325

Query: 184 K 185
           K
Sbjct: 341 K 325

[Close]

BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot
Match: Q96EP5 (DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1)

HSP 1 Score: 183.7 bits (465), Expect = 4.8e-45
Identity = 111/290 (38.28%), Postives = 154/290 (53.10%), Query Frame = 0


Query: 6   GKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADRVIR 65
           GKLFVGG+ W T ++ L+ YF+ YG+VV+ VIMKD+TT + RGFGF+ F DP+    V+ 
Sbjct: 10  GKLFVGGLDWSTTQETLRSYFSQYGEVVDCVIMKDKTTNQSRGFGFVKFKDPNCVGTVLA 69

Query: 66  EK-HNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGP----GRTRKIFVGGLASTVTES 125
            + H +DGR ++ K   PR  Q    RT        GP     ++ KIFVGG+     E+
Sbjct: 70  SRPHTLDGRNIDPKPCTPRGMQ--PERTRPKEGWQKGPRSDNSKSNKIFVGGIPHNCGET 129

Query: 126 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 185
           E + YF +FG +T+VV++YD    RPRGFGFIT++ E++V++ +   FH++ GK VEVKR
Sbjct: 130 ELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGKKVEVKR 189

Query: 186 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYT--------QGY--------SSSTIGGY 245
           A P++        P G   +G   V +  NG+         QGY        +   IGGY
Sbjct: 190 AEPRDSKSQAPGQP-GASQWGSRVVPNAANGWAGQPPPTWQQGYGPQGMWVPAGQAIGGY 249

Query: 246 GVRVDGRFSP----------VSSGRSVFTP---FGSGYGMGVNFDIGLNP 262
           G    GR +P          VS+    F P   F  GYG    F  G  P
Sbjct: 250 GPPPAGRGAPPPPPPFTSYIVSTPPGGFPPPQGFPQGYGAPPQFSFGYGP 296

[Close]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL
Match: A0A0A0KDX2 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110300 PE=4 SV=1)

HSP 1 Score: 934.1 bits (2413), Expect = 2.3e-268
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ
Sbjct: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL
Match: A0A1S3CKY6 (heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC103502128 PE=4 SV=1)

HSP 1 Score: 927.5 bits (2396), Expect = 2.2e-266
Identity = 471/476 (98.95%), Postives = 475/476 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL
Match: A0A5D3CKF6 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold177G00630 PE=4 SV=1)

HSP 1 Score: 921.8 bits (2381), Expect = 1.2e-264
Identity = 468/473 (98.94%), Postives = 472/473 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 29  MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 88

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 89  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 148

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 149 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 208

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 209 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 268

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 269 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 328

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 329 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 388

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 389 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 448

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 474
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG
Sbjct: 449 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 501

[Close]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL
Match: A0A5A7TS95 (Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G005890 PE=4 SV=1)

HSP 1 Score: 920.2 bits (2377), Expect = 3.5e-264
Identity = 467/473 (98.73%), Postives = 471/473 (99.58%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 26  MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 85

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 86  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 145

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 146 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 205

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 206 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 265

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 266 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 325

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 326 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 385

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGT LPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 386 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTALPPTSSFPTSTVGFDGPFADFYSA 445

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 474
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG
Sbjct: 446 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 498

[Close]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL
Match: A0A6J1CH94 (heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111011174 PE=4 SV=1)

HSP 1 Score: 889.8 bits (2298), Expect = 5.0e-255
Identity = 451/476 (94.75%), Postives = 468/476 (98.32%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDE+RLKEYF+A+GDVVEAVIMKDRTTGRGRGFGFIVFAD S+A
Sbjct: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGDVVEAVIMKDRTTGRGRGFGFIVFADSSIA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNF+IGLNPGYGG+SNFA+NLNYGRGLSPYYTGNSDRFGNIGY+ GNG
Sbjct: 241 VFTPFGSGYGMGVNFEIGLNPGYGGSSNFANNLNYGRGLSPYYTGNSDRFGNIGYDGGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSA SNAHLGSA+ GS+GG+ FANSGV+W SSGISSQ
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSATSNAHLGSAS-GSIGGSAFANSGVNWSSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGG+NVFSN+GNLNYGGVDSSYSLGAGGYGRN+GTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 361 GGGSNVFSNTGNLNYGGVDSSYSLGAGGYGRNTGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVS+RSSPGFIG HSVNRRQSNRGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSSRSSPGFIGAHSVNRRQSNRGNTT 475

[Close]

BLAST of CSPI06G09000 vs. NCBI nr
Match: XP_004140014.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN46587.1 hypothetical protein Csa_004914 [Cucumis sativus])

HSP 1 Score: 934.1 bits (2413), Expect = 4.8e-268
Identity = 476/476 (100.00%), Postives = 476/476 (100.00%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ
Sbjct: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of CSPI06G09000 vs. NCBI nr
Match: XP_008464191.1 (PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo])

HSP 1 Score: 927.5 bits (2396), Expect = 4.5e-266
Identity = 471/476 (98.95%), Postives = 475/476 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 301 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of CSPI06G09000 vs. NCBI nr
Match: TYK11900.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 921.8 bits (2381), Expect = 2.5e-264
Identity = 468/473 (98.94%), Postives = 472/473 (99.79%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 29  MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 88

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 89  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 148

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 149 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 208

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 209 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 268

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 269 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 328

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 329 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 388

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 389 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 448

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 474
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG
Sbjct: 449 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 501

[Close]

BLAST of CSPI06G09000 vs. NCBI nr
Match: KAA0046020.1 (heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa])

HSP 1 Score: 920.2 bits (2377), Expect = 7.1e-264
Identity = 467/473 (98.73%), Postives = 471/473 (99.58%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 26  MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 85

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 86  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 145

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 146 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 205

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 206 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 265

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNFDIGLNPGYGGNSNFA+NLNYGRGLSPYYTGNSDRFGNIGYESGNG
Sbjct: 266 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFANNLNYGRGLSPYYTGNSDRFGNIGYESGNG 325

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLWGSGGLNNGTNSANSNAHLGSA+GGS+GGTGFANSGVSWGSSGISSQ
Sbjct: 326 GNSSFFSSATQNLWGSGGLNNGTNSANSNAHLGSASGGSIGGTGFANSGVSWGSSGISSQ 385

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGT LPPTSSFPTSTVGFDGPFADFYSA
Sbjct: 386 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTALPPTSSFPTSTVGFDGPFADFYSA 445

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 474
           GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG
Sbjct: 446 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 498

[Close]

BLAST of CSPI06G09000 vs. NCBI nr
Match: XP_038901062.1 (heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida])

HSP 1 Score: 902.9 bits (2332), Expect = 1.2e-258
Identity = 458/476 (96.22%), Postives = 471/476 (98.95%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQTDSGKLFVGGISWDTDE+RLKEYF+A+GDVVEAVIMKDRTTGRGRGFGFIVFADPSVA
Sbjct: 1   MQTDSGKLFVGGISWDTDEERLKEYFSAFGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES
Sbjct: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR
Sbjct: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVR+DGRFSPVSSGRS
Sbjct: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRMDGRFSPVSSGRS 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
           VFTPFGSGYGMGVNF+IG+NPGYGG+SNFASNLNYGRGLSPYYTGNSDRFGNIGY+SGNG
Sbjct: 241 VFTPFGSGYGMGVNFEIGVNPGYGGSSNFASNLNYGRGLSPYYTGNSDRFGNIGYDSGNG 300

Query: 301 GNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGISSQ 360
           GNSSFFSS TQNLW SGGLNNGTNSANSNAHLGSA+GGS+GGT FANSGV+WGSSGISSQ
Sbjct: 301 GNSSFFSSATQNLWESGGLNNGTNSANSNAHLGSASGGSIGGTAFANSGVNWGSSGISSQ 360

Query: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADFYSA 420
           GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFP+STVGFDG FADFYSA
Sbjct: 361 GGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPSSTVGFDGNFADFYSA 420

Query: 421 GYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRGNTT 477
            YGDPTWRSSNFERDGSGPFGYGLGSAASDVS+RSSPGFIGGHSVNRRQSNRGNTT
Sbjct: 421 SYGDPTWRSSNFERDGSGPFGYGLGSAASDVSSRSSPGFIGGHSVNRRQSNRGNTT 476

[Close]

BLAST of CSPI06G09000 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 565.5 bits (1456), Expect = 4.2e-161
Identity = 320/499 (64.13%), Postives = 386/499 (77.35%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQ+D+GKLF+GGISWDT+E+RLKEYF+++G+V+EAVI+KDRTTGR RGFGF+VFADP+VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRT-SGSINVSP-GPGRTRKIFVGGLASTVT 120
           + VI EKHNIDGR+VEAK+AVPR+DQN+V R+ S SI  SP GPGRTRKIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ES+FK YF+QFGT TDVVVMYDHNT RPRGFGFITYDSEEAVEKVL+KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLG-GYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSS 240
           KRAVPKELSPGPSRSPLG GY+YG +RVN+ LNGY QG++ + +GGYG+R+DGRFSPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 GRSVFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFG-NIGYE 300
           GRS F  + SGYGM VNFD GL  G+ G +N+  N++YGRG+SPYY GN++RFG  +GYE
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 SGN-GGNSSFFSSETQNLWG-SGGLNNGTNSANSNAHL---GSATGGSVGGTGFANSGVS 360
            GN GGNSSFFSS T+NLWG +GGLN   N+ NSN++    GS++G +     F NSGV+
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WGSSGISSQGGGNNVFSNSG-NLNYGG-VDSSYSLGAGGY-GRNSG-TVLPPTSSF---- 420
           WG     + GGGNN  SN      YGG  +S + LG GGY  RN G     P+SSF    
Sbjct: 361 WG-----APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420

Query: 421 PTSTVGFD-GPFADFYSAG--YGDPTWRSSNFERDGSGPFGYGLGSA--ASDVSAR-SSP 477
            T+  G+D    A+FY  G  Y DPTWRS   E +G  PF YG+G    +SDVSAR SSP
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480

[Close]

BLAST of CSPI06G09000 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 565.1 bits (1455), Expect = 5.4e-161
Identity = 319/496 (64.31%), Postives = 385/496 (77.62%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           MQ+D+GKLF+GGISWDT+E+RLKEYF+++G+V+EAVI+KDRTTGR RGFGF+VFADP+VA
Sbjct: 1   MQSDNGKLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRT-SGSINVSP-GPGRTRKIFVGGLASTVT 120
           + VI EKHNIDGR+VEAK+AVPR+DQN+V R+ S SI  SP GPGRTRKIFVGGL S+VT
Sbjct: 61  EIVITEKHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVT 120

Query: 121 ESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEV 180
           ES+FK YF+QFGT TDVVVMYDHNT RPRGFGFITYDSEEAVEKVL+KTFHELNGKMVEV
Sbjct: 121 ESDFKTYFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

Query: 181 KRAVPKELSPGPSRSPLG-GYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSS 240
           KRAVPKELSPGPSRSPLG GY+YG +RVN+ LNGY QG++ + +GGYG+R+DGRFSPV +
Sbjct: 181 KRAVPKELSPGPSRSPLGAGYSYGVNRVNNLLNGYAQGFNPAAVGGYGLRMDGRFSPVGA 240

Query: 241 GRSVFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFG-NIGYE 300
           GRS F  + SGYGM VNFD GL  G+ G +N+  N++YGRG+SPYY GN++RFG  +GYE
Sbjct: 241 GRSGFANYSSGYGMNVNFDQGLPTGFTGGTNYNGNVDYGRGMSPYYIGNTNRFGPAVGYE 300

Query: 301 SGN-GGNSSFFSSETQNLWG-SGGLNNGTNSANSNAHL---GSATGGSVGGTGFANSGVS 360
            GN GGNSSFFSS T+NLWG +GGLN   N+ NSN++    GS++G +     F NSGV+
Sbjct: 301 GGNGGGNSSFFSSVTRNLWGNNGGLNYNNNNTNSNSNTYMGGSSSGNNTLSGPFGNSGVN 360

Query: 361 WGSSGISSQGGGNNVFSNSG-NLNYGG-VDSSYSLGAGGY-GRNSG-TVLPPTSSF---- 420
           WG     + GGGNN  SN      YGG  +S + LG GGY  RN G     P+SSF    
Sbjct: 361 WG-----APGGGNNAVSNENVKFGYGGNGESGFGLGTGGYAARNPGANKAAPSSSFSSAS 420

Query: 421 PTSTVGFD-GPFADFYSAG--YGDPTWRSSNFERDGSGPFGYGLGSA--ASDVSAR-SSP 474
            T+  G+D    A+FY  G  Y DPTWRS   E +G  PF YG+G    +SDVSAR SSP
Sbjct: 421 ATNNTGYDTAGLAEFYGNGAVYSDPTWRSPTPETEGPAPFSYGIGGGVPSSDVSARSSSP 480

[Close]

BLAST of CSPI06G09000 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 366.7 bits (940), Expect = 2.8e-101
Identity = 240/497 (48.29%), Postives = 315/497 (63.38%), Query Frame = 0


Query: 3   TDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
           +D GKLF+GGISWDTDE+RL+EYF  YGD+VEAVIM+DRTTGR RGFGFIVFADPSVA+R
Sbjct: 12  SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 71

Query: 63  VIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSIN-VSP------GPGRTRKIFVGGLAS 122
           VI +KH IDGR VEAK+AVPR+DQ ++ R +  ++ +SP      G  RT+KIFVGGL S
Sbjct: 72  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 131

Query: 123 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 182
           ++TE+EFKNYFDQFGTI DVVVMYDHNT RPRGFGFIT+DSEE+V+ VL KTFHELNGKM
Sbjct: 132 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 191

Query: 183 VEVKRAVPKEL-SPGPSRSPLGGY--NYG----QSRVNSFLNGYTQGYSSSTIGGYGVRV 242
           VEVKRAVPKEL S  P+RSPL GY  NYG    +S  NS+ N +  GY+++ +G      
Sbjct: 192 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 251

Query: 243 DGRFSPVSSGRSVFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGR--GLSPYYTGN 302
            GRFSP+ SGR+ F    S +G+G+N ++ LN  + GN+     L Y R  G   + + +
Sbjct: 252 AGRFSPIGSGRNAF----SSFGLGLNQELNLNSNFDGNT-----LGYSRIPGNQYFNSAS 311

Query: 303 SDRFGN-IGYESGNGGNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGF 362
            +R+ + IGY  G+    S ++   ++LWG     N ++S+    +LG + G + G    
Sbjct: 312 PNRYNSPIGYNRGD----SAYNPSNRDLWG-----NRSDSSGPGWNLGVSVGNNRG---- 371

Query: 363 ANSGVSWGSSGISSQGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPT 422
                +WG S + S   G           YG    SY  G+G  G           SF  
Sbjct: 372 -----NWGLSSVVSDNNG-----------YG---RSYGAGSGLSG----------LSFAG 431

Query: 423 STVGFDGPFADFY--SAGYGDPTWR------SSNFERDG-SGPFGYGLGSAASDVSARSS 474
           +T GFDG   + Y  S+ Y D TW+       S+ E DG S  +G+G+ +  SD SA +S
Sbjct: 432 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 452

[Close]

BLAST of CSPI06G09000 vs. TAIR 10
Match: AT4G26650.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 366.7 bits (940), Expect = 2.8e-101
Identity = 240/497 (48.29%), Postives = 315/497 (63.38%), Query Frame = 0


Query: 3   TDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVADR 62
           +D GKLF+GGISWDTDE+RL+EYF  YGD+VEAVIM+DRTTGR RGFGFIVFADPSVA+R
Sbjct: 9   SDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAER 68

Query: 63  VIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSIN-VSP------GPGRTRKIFVGGLAS 122
           VI +KH IDGR VEAK+AVPR+DQ ++ R +  ++ +SP      G  RT+KIFVGGL S
Sbjct: 69  VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 128

Query: 123 TVTESEFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKM 182
           ++TE+EFKNYFDQFGTI DVVVMYDHNT RPRGFGFIT+DSEE+V+ VL KTFHELNGKM
Sbjct: 129 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKM 188

Query: 183 VEVKRAVPKEL-SPGPSRSPLGGY--NYG----QSRVNSFLNGYTQGYSSSTIGGYGVRV 242
           VEVKRAVPKEL S  P+RSPL GY  NYG    +S  NS+ N +  GY+++ +G      
Sbjct: 189 VEVKRAVPKELSSTTPNRSPLIGYGNNYGVVPNRSSANSYFNSFPPGYNNNNLGS----- 248

Query: 243 DGRFSPVSSGRSVFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGR--GLSPYYTGN 302
            GRFSP+ SGR+ F    S +G+G+N ++ LN  + GN+     L Y R  G   + + +
Sbjct: 249 AGRFSPIGSGRNAF----SSFGLGLNQELNLNSNFDGNT-----LGYSRIPGNQYFNSAS 308

Query: 303 SDRFGN-IGYESGNGGNSSFFSSETQNLWGSGGLNNGTNSANSNAHLGSATGGSVGGTGF 362
            +R+ + IGY  G+    S ++   ++LWG     N ++S+    +LG + G + G    
Sbjct: 309 PNRYNSPIGYNRGD----SAYNPSNRDLWG-----NRSDSSGPGWNLGVSVGNNRG---- 368

Query: 363 ANSGVSWGSSGISSQGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPT 422
                +WG S + S   G           YG    SY  G+G  G           SF  
Sbjct: 369 -----NWGLSSVVSDNNG-----------YG---RSYGAGSGLSG----------LSFAG 428

Query: 423 STVGFDGPFADFY--SAGYGDPTWR------SSNFERDG-SGPFGYGLGSAASDVSARSS 474
           +T GFDG   + Y  S+ Y D TW+       S+ E DG S  +G+G+ +  SD SA +S
Sbjct: 429 NTNGFDGSIGELYRGSSVYSDSTWQQSMPHHQSSNELDGLSRSYGFGIDNVGSDPSANAS 449

[Close]

BLAST of CSPI06G09000 vs. TAIR 10
Match: AT5G47620.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 345.1 bits (884), Expect = 8.8e-95
Identity = 218/476 (45.80%), Postives = 292/476 (61.34%), Query Frame = 0


Query: 1   MQTDSGKLFVGGISWDTDEDRLKEYFNAYGDVVEAVIMKDRTTGRGRGFGFIVFADPSVA 60
           M+ +S KLF+GGISW+T EDRL++YF+++G+V+EAVIMKDR TGR RGFGF+VFADP+VA
Sbjct: 1   MEMESCKLFIGGISWETSEDRLRDYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPNVA 60

Query: 61  DRVIREKHNIDGRMVEAKRAVPRNDQNIVGRTSGSINVSPGPGRTRKIFVGGLASTVTES 120
           +RV+  KH IDG++VEAK+AVPR+D  +  +++ S+  SPGP  ++KIFVGGLAS+VTE+
Sbjct: 61  ERVVLLKHIIDGKIVEAKKAVPRDDHVVFNKSNSSLQGSPGPSNSKKIFVGGLASSVTEA 120

Query: 121 EFKNYFDQFGTITDVVVMYDHNTLRPRGFGFITYDSEEAVEKVLIKTFHELNGKMVEVKR 180
           EFK YF QFG ITDVVVMYDH T RPRGFGFI+YDSEEAV+KVL KTFHELNGKMVEVK 
Sbjct: 121 EFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEEAVDKVLQKTFHELNGKMVEVKL 180

Query: 181 AVPKELSPGPSRSPLGGYNYGQSRVNSFLNGYTQGYSSSTIGGYGVRVDGRFSPVSSGRS 240
           AVPK+++    R+ +   ++G SR++S LN YTQG+S S I GYGV+ + R+SP    R 
Sbjct: 181 AVPKDMALNTMRNQMNVNSFGTSRISSLLNEYTQGFSPSPISGYGVKPEVRYSPAVGNRG 240

Query: 241 VFTPFGSGYGMGVNFDIGLNPGYGGNSNFASNLNYGRGLSPYYTGNSDRFGNIGYESGNG 300
            F+PFG GYG+ +NF+      YG  S+      +GR  SP Y  +  RFG+   ESG  
Sbjct: 241 GFSPFGHGYGIELNFEPNQTQNYGSGSSG----GFGRPFSPGYAASLGRFGS-QMESGGA 300

Query: 301 --GNSSFFSSETQN-LWGSGGLNNGTNSANSNAHLGSATGGSVGGTGFANSGVSWGSSGI 360
             GN S  ++  +N LWG+GGL   +NS  S     S+  G+ G +   + G +WG+   
Sbjct: 301 SVGNGSVLNAAPKNHLWGNGGLGYMSNSPISR----SSFSGNSGMSSLGSIGDNWGTVAR 360

Query: 361 SSQGGGNNVFSNSGNLNYGGVDSSYSLGAGGYGRNSGTVLPPTSSFPTSTVGFDGPFADF 420
           +         S  G     G+++   +  GGY  +SG+ +    S               
Sbjct: 361 ARS-------SYHGERGGVGLEAMRGVHVGGY--SSGSSILEADSL-------------- 420

Query: 421 YSAGYGDPTWRSSNFERDGSGPFGYGLGSAASDVSARSSPGFIGGHSVNRRQSNRG 474
               Y D  W S   + +       GLG    D  +R   G+I       RQ N G
Sbjct: 421 ----YSDSMWLSLPAKAE------EGLGMGPLDFMSRGPAGYI------NRQPNGG 428

The following BLAST results are available for this feature:

BLAST of CSPI06G09000 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	8.4e-66	41.74	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
Q9C652	3.3e-46	48.24	RNA-binding protein 1 OS=Arabidopsis thaliana OX=3702 GN=RBP1 PE=2 SV=1	[more]
Q98SJ2	7.4e-46	39.93	DAZ-associated protein 1 OS=Xenopus laevis OX=8355 GN=dazap1 PE=1 SV=1	[more]
O94432	3.7e-45	43.09	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]
Q96EP5	4.8e-45	38.28	DAZ-associated protein 1 OS=Homo sapiens OX=9606 GN=DAZAP1 PE=1 SV=1	[more]

BLAST of CSPI06G09000 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDX2	2.3e-268	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G110300 PE=4 SV=1	[more]
A0A1S3CKY6	2.2e-266	98.95	heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo OX=3656 GN=LOC10350212...	[more]
A0A5D3CKF6	1.2e-264	98.94	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A5A7TS95	3.5e-264	98.73	Heterogeneous nuclear ribonucleoprotein 1 OS=Cucumis melo var. makuwa OX=1194695...	[more]
A0A6J1CH94	5.0e-255	94.75	heterogeneous nuclear ribonucleoprotein 1 isoform X1 OS=Momordica charantia OX=3...	[more]

BLAST of CSPI06G09000 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140014.1	4.8e-268	100.00	heterogeneous nuclear ribonucleoprotein 1 [Cucumis sativus] >KGN46587.1 hypothet...	[more]
XP_008464191.1	4.5e-266	98.95	PREDICTED: heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo]	[more]
TYK11900.1	2.5e-264	98.94	heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa]	[more]
KAA0046020.1	7.1e-264	98.73	heterogeneous nuclear ribonucleoprotein 1 [Cucumis melo var. makuwa]	[more]
XP_038901062.1	1.2e-258	96.22	heterogeneous nuclear ribonucleoprotein 1 [Benincasa hispida]	[more]

BLAST of CSPI06G09000 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G07810.1	4.2e-161	64.13	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	5.4e-161	64.31	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	2.8e-101	48.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.2	2.8e-101	48.29	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT5G47620.1	8.8e-95	45.80	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 7..78 e-value: 5.0E-24 score: 95.8 coord: 107..179 e-value: 7.0E-23 score: 92.0
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 8..69 e-value: 1.1E-15 score: 57.2 coord: 108..165 e-value: 7.3E-15 score: 54.6
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 6..82 score: 17.301737
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 106..183 score: 17.523457
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..88 e-value: 1.5E-26 score: 94.5
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 103..189 e-value: 2.3E-25 score: 90.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 444..476
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 462..476
None	No IPR available	PANTHER	PTHR48032:SF1	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 1-LIKE	coord: 1..475
None	No IPR available	PANTHER	PTHR48032	RNA-BINDING PROTEIN MUSASHI HOMOLOG RBP6	coord: 1..475
None	No IPR available	CDD	cd12325	RRM1_hnRNPA_hnRNPD_like	coord: 8..78 e-value: 2.27185E-35 score: 124.235
IPR034131	DAZ-associated protein 1, RNA recognition motif 2	CDD	cd12327	RRM2_DAZAP1	coord: 104..183 e-value: 7.71749E-45 score: 149.823
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 3..102
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 99..204

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G09000.1	CSPI06G09000.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003729	mRNA binding
molecular_function	GO:0003676	nucleic acid binding
molecular_function	GO:0003723	RNA binding