CSPI06G08510 (gene) Cucumber (PI 183967) v1

Overview
NameCSPI06G08510
Typegene
OrganismCucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
DescriptionUnknown protein
LocationChr6: 7169284 .. 7169499 (+)
RNA-Seq ExpressionCSPI06G08510
SyntenyCSPI06G08510
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGATCGTCGGAGGTGATGTTTGAGTTAGTTGTTTAAGTTTCTGTCAGAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATTGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

mRNA sequence

ATGATCGTCGGAGGTGATAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATTGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

Coding sequence (CDS)

ATGATCGTCGGAGGTGATAGTTGGTCATTGGAAGGGTCCTTGGTGTTGGCCACTGGATTGTGTGTTCGTCAAATATGTGGTGCAAATGGTTGGTTACCAAAGTTTTTGTACAAAGCCGATGATCTTAGAGATTTTTCTCACTGGAGGCCAGTGTCACTAGATATTAGAGGTGGTAATCTGAGTTAG

Protein sequence

MIVGGDSWSLEGSLVLATGLCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNLS*
Homology
[Close]
BLAST of CSPI06G08510 vs. ExPASy TrEMBL
Match: A0A0A0KFN4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107860 PE=4 SV=1)

HSP 1 Score: 134.4 bits (337), Expect = 1.6e-28
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MIVGGDSWSLEGSLVLATGLCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60
          MIVGGDSWSLEGSLVLATG CVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL
Sbjct: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60

Query: 61 S 62
          S
Sbjct: 61 S 61

[Close]
BLAST of CSPI06G08510 vs. NCBI nr
Match: KGN46536.1 (hypothetical protein Csa_005713 [Cucumis sativus])

HSP 1 Score: 134.4 bits (337), Expect = 3.3e-28
Identity = 60/61 (98.36%), Postives = 60/61 (98.36%), Query Frame = 0 

Query: 1  MIVGGDSWSLEGSLVLATGLCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60
          MIVGGDSWSLEGSLVLATG CVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL
Sbjct: 1  MIVGGDSWSLEGSLVLATGWCVRQICGANGWLPKFLYKADDLRDFSHWRPVSLDIRGGNL 60

Query: 61 S 62
          S
Sbjct: 61 S 61

The following BLAST results are available for this feature:
BLAST of CSPI06G08510 vs.
Match NameE-valueIdentityDescription
BLAST of CSPI06G08510 vs. ExPASy TrEMBL
Match NameE-valueIdentityDescription
A0A0A0KFN41.6e-2898.36Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G107860 PE=4 SV=1[more]
BLAST of CSPI06G08510 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN46536.13.3e-2898.36hypothetical protein Csa_005713 [Cucumis sativus][more]
BLAST of CSPI06G08510 vs. NCBI nr
Match NameE-valueIdentityDescription
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CSPI06G08510.1CSPI06G08510.1mRNA