CSPI06G08180 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CGGTGGTTCGTTTAGACTTCTACAAATTTCCTTCAGATCTTGCAATGGACAAGGTTGCGGAGGAGGTGAATCGGGTCAAAAATGAGTGGAATGAGGCTTTTCATCAAACTATCGAGCGGATTAAGGCAATCGATTCATACGATAAACAAAGTGAATCAATGGGGAAGAATTCCCTCCCCAGACTCAATGCTCTTGCTCAAGATGGATTGAACCTCCTCTCATCGCTGGAATTCAAGCTCGATCTTCTTGCTCCCCAGTTGCTCTCTGATTCTGAAATCGAAGCTGCTCAATCGCTGCTTGAATCCTGGAAAAATCAATCTCAAAAGTAACTAATTTTCAAGCTCCTTTGTGATTCATGTAGTTTAATTGGACTGGAATTGTTAAATTCTATCGTTCTTAGCCAATAGAAGTGATGGGTGATTGTCGTTTGGTTGTTACTTGAAACGGGGTTCCTTTTTTTTTTTTTCCTCTTTTGTATGTATTTCAGTTTGCGATCGAGTCTGAGAAATGCTAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGGTAATTAATTTAAACTGATTTTTGTAATATTTTCCTATATAGTTTATATAGATTGGCCTAGTATTCTTAATGCTTAATGTTGCATTTCTCCGTTATTTCCTGAATGTGGAAATTTTTTTGAGATAACACTATTTCTTCAATGTCAAACTTTACATTATACTCAGGATGTTGGTGGCTTTCATTGTAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAGTAAGTTTTCAATACGTGACGGTTTTCAAAAGGTTTATCTAATTGTTTCAAAATGTCCATCTCTTTTGTAATGTTGGAAACCTCGTTTTCCCCATATGCAGAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGAAAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGTCTGTTTCTGGTTTTATATATCTCTCATTTTTATTATATTTAATTTGATCTTGATTGAATTTTAAATTTCGTTTCACTTAGTTATGTAATGTTCTTGAATTCTGACCTGTAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGGTATGTTTTCTAAAATCTTTGTATGGCATCTCTGTTCGTGTTGTGCTTTCCAGTCAATTAGTTAGCTTTACTTCATCTTGATGGTAGAATTACATAGCATAGCAAATGAACTTGTTAGGATATACCGTACACAACATATAGAAGTGATATCCATGATCTTATCTTAAGCTGAGTTATTAAAAAAAATTCCACTCTTGCAGATCTCATATATGCCCGCAGTTGAGGGAATTAGAAAGTAAGACATAACTTAGCGTTTATTTATTTAGGAAAATATTTGTTTAGCAGGTAGTATGAGTGGTATCTCAGGTACTGATTGAAAACACCGATCATCTTGATCTTAGGGGAACGACAAGGAAATGAGTACTATCTTCGTTGCCTTGTTGTTTACAGAATGTTTAAATAATTTACATAATTTTTAGAATAAGCAAAATGGTCTGACTGGCATTTTGATTCCATTTACTCATTTTCATTAACATGGTACTTGGGTCGGACCATTTGAAGTCCACATTAATTCCTGTTGCTTTGCAGTTTTGGATATGCTAGGGTTAGATTACAGCTTATAAATTTATGATATGTGTAGATGCTAAATTATGATCACGATGTCTTGAACTACACGTCTGCTAATTTAGGAACGCATTCAGTTCTCATTGTGCTGCAAAGTTGAGGTTTCCCTCTTCTTGTCTACCTGCAGCCTGAACATTCTAATCAGATTATACTATTATTATTATGAGGTTTTTCATTTGCTCGCCTTCCTCTATTCTTCTCTACTTATTTTGAAAAAATTACATGACATGATAGTTTTTCTTGCTACTTCGCTGGGATTTTTGGAAAAGTACCATGTTCTTGAGGTGATCTTAAGCTGATTGTAAATGGAATCTAGTGAAGATAGTTGCATATCACTAACAAAAGGGTCTTCAAGTTCAAGTTGATACTATTCCCAAAGTTTAGGGATATAAATTGATATTTTCCCTTGTTATTATCTACAAGGCTCCATTGTTTAGAACAAAAATAAACATGAGAATTTGATAAAAGTTTATTTATAAAAACTTTTAAGGAAAAAGTTGAGATGTGCCGAGCTCCAAACCTCTTTTCAAAACACCTCATAGTGGTAATGGGGACTCAAAACAAAATCTTCCCTTACAGCACAACAGTCCTTGATGGTGCTTATCAACTCTCCTAGCGTCTAGTAACCATAATGGAGCACAAGAACACGATATTTAAATCATTTTGGGAAATTGTTTTAAATCTCAAAACTGCTAAAAATATTTGAAAATATAGCAAATTTCAGTCTATCAATGATAGTGATAGAACTGATAAACATCTATCAGCATCTATTACTGATATTTATAAATATTTTGGCTTATTTTACTATATTTGAAAACAGTCCAATCATTTTTAAGCTCTCATATATATATATATATATATTATTTTAGACTAGTTTTTTGAAATCATGTGATAAAAGCACTAGAAGATAGAATTGCTTCTTGGATTATCTTTGTGTGTTATTGGAAACCTGGCCAACCTGTGGAACTTACACAGGAGTATTTGGTTCTTACAGATGAATCAACTGGAGTGTTAAAGAAGGCCGAGAGTGAATATAAGGGGCATCGCTCATTGTTAACACGAACCAGAAACTTACTTTCAACAATGCAACGGCAAGATGTAATGGACAGGTAAATAGATGATTAATTGCCTCTTGTTCTTCAAATATAAATTCTTTATATGTCAAATCTTGGAAGAACAAATACTTTGTTTTAGGCAAAGTGGCGAGATGTCTGGTCATTCTCTAAATTGCTACGTGTTCGATATGTGTGTTTTAATTATATTAATATTATTTTTCTAATTAGAGACATGGCTTGGACACAGATGAACACAATTAACCTAAAAATTAGAGTAAAAAAGGGGATCTTCTTATAGACTGAATCCTTATAGATTGATCAATCCTAAAGTATTGTGATGACATTTTTCCTTTTAGCCAACTAAATCTTTGTTCTAAGGTTTTAAATGATCATTTATTGACTTTACTTTGTGTGTTACAGTGAAGTACACCGTGTTTTAATTATAGGGAAGCATTAATGAAATTTCATAGTACTTCATACATCAATGAAATTCTTTTATTAAAAAAAACATTAATATGTCAAACCACCTCTACGACTTAGTAAATTCTAACAATGAGAGGCTAATATGAACAGGATTATATTGGCCGTTGGGTTTTTCTTCTTCTCTCTTGCTGTTCTTTATGTCGTCTCAAAACGCATTGGGCTACTGAAGTTACAGAGGATGGCCACTGCTGCCATTAAAGCAGGGATGGCTAAGCAAGCAAATCAAATACCTGGAGATGTTATTGACCATGGTAGAAATCCAGTTCAAGCCAAGGAGGATTTAGTTCACAGAATCGAAGATCCACAGGAACGACGTATTTGGGATGAGCTTTGAACTGTAGCATTTGTGTCGGAAAATGAATGGACAAATGGCACATCTCTAGAGTTGTGTAGCTTTTTAAACACGTTTTAAGGTATACATTTCAGTCTAACGGTTTCTTGTGCAGAAAAATTTGGAGTTCAAGTTGTAATTTATTGAAACAGTGTGCATCTCTGTGGGAAAAAAACTACCAACAACTAGAGAGCACGTTTTTTGGGTGTGTTTAAAGACTACATTAATACAAGTAAGCCAATCATTTTCTTCTCTATGTAGATCTTATTTA CGGTGGTTCGTTTAGACTTCTACAAATTTCCTTCAGATCTTGCAATGGACAAGGTTGCGGAGGAGGTGAATCGGGTCAAAAATGAGTGGAATGAGGCTTTTCATCAAACTATCGAGCGGATTAAGGCAATCGATTCATACGATAAACAAAGTGAATCAATGGGGAAGAATTCCCTCCCCAGACTCAATGCTCTTGCTCAAGATGGATTGAACCTCCTCTCATCGCTGGAATTCAAGCTCGATCTTCTTGCTCCCCAGTTGCTCTCTGATTCTGAAATCGAAGCTGCTCAATCGCTGCTTGAATCCTGGAAAAATCAATCTCAAAATTTGCGATCGAGTCTGAGAAATGCTAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGAAAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGATGAATCAACTGGAGTGTTAAAGAAGGCCGAGAGTGAATATAAGGGGCATCGCTCATTGTTAACACGAACCAGAAACTTACTTTCAACAATGCAACGGCAAGATGTAATGGACAGGATTATATTGGCCGTTGGGTTTTTCTTCTTCTCTCTTGCTGTTCTTTATGTCGTCTCAAAACGCATTGGGCTACTGAAGTTACAGAGGATGGCCACTGCTGCCATTAAAGCAGGGATGGCTAAGCAAGCAAATCAAATACCTGGAGATGTTATTGACCATGGTAGAAATCCAGTTCAAGCCAAGGAGGATTTAGTTCACAGAATCGAAGATCCACAGGAACGACGTATTTGGGATGAGCTTTGAACTGTAGCATTTGTGTCGGAAAATGAATGGACAAATGGCACATCTCTAGAGTTGTGTAGCTTTTTAAACACGTTTTAAGGTATACATTTCAGTCTAACGGTTTCTTGTGCAGAAAAATTTGGAGTTCAAGTTGTAATTTATTGAAACAGTGTGCATCTCTGTGGGAAAAAAACTACCAACAACTAGAGAGCACGTTTTTTGGGTGTGTTTAAAGACTACATTAATACAAGTAAGCCAATCATTTTCTTCTCTATGTAGATCTTATTTA ATGGACAAGGTTGCGGAGGAGGTGAATCGGGTCAAAAATGAGTGGAATGAGGCTTTTCATCAAACTATCGAGCGGATTAAGGCAATCGATTCATACGATAAACAAAGTGAATCAATGGGGAAGAATTCCCTCCCCAGACTCAATGCTCTTGCTCAAGATGGATTGAACCTCCTCTCATCGCTGGAATTCAAGCTCGATCTTCTTGCTCCCCAGTTGCTCTCTGATTCTGAAATCGAAGCTGCTCAATCGCTGCTTGAATCCTGGAAAAATCAATCTCAAAATTTGCGATCGAGTCTGAGAAATGCTAATATGCAAGCAAAAGCCAACATGAGAAAGGCTGCTCAGGAGGAGAGAGAACGACTTCTAGGTGGAGGAGAAGAGTCCACAATTCGCAGACGGAATTTACAAACTAAGGCTGGAATGACATCTGCTGCAGAAAGCATCACCGAAAGCCTTCGCCGAACCCGTCAGCTTATGGTTCAGGAGGTGGAAAGAACTGCAAGCACAATTGAGACTTTCGATGAATCAACTGGAGTGTTAAAGAAGGCCGAGAGTGAATATAAGGGGCATCGCTCATTGTTAACACGAACCAGAAACTTACTTTCAACAATGCAACGGCAAGATGTAATGGACAGGATTATATTGGCCGTTGGGTTTTTCTTCTTCTCTCTTGCTGTTCTTTATGTCGTCTCAAAACGCATTGGGCTACTGAAGTTACAGAGGATGGCCACTGCTGCCATTAAAGCAGGGATGGCTAAGCAAGCAAATCAAATACCTGGAGATGTTATTGACCATGGTAGAAATCCAGTTCAAGCCAAGGAGGATTTAGTTCACAGAATCGAAGATCCACAGGAACGACGTATTTGGGATGAGCTTTGA MDKVAEEVNRVKNEWNEAFHQTIERIKAIDSYDKQSESMGKNSLPRLNALAQDGLNLLSSLEFKLDLLAPQLLSDSEIEAAQSLLESWKNQSQNLRSSLRNANMQAKANMRKAAQEERERLLGGGEESTIRRRNLQTKAGMTSAAESITESLRRTRQLMVQEVERTASTIETFDESTGVLKKAESEYKGHRSLLTRTRNLLSTMQRQDVMDRIILAVGFFFFSLAVLYVVSKRIGLLKLQRMATAAIKAGMAKQANQIPGDVIDHGRNPVQAKEDLVHRIEDPQERRIWDEL* Homology
BLAST of CSPI06G08180 vs. ExPASy Swiss-Prot
Match: Q6QD59 (Vesicle transport protein SEC20 OS=Mus musculus OX=10090 GN=Bnip1 PE=1 SV=1) HSP 1 Score: 56.2 bits (134), Expect = 7.1e-07 Identity = 51/193 (26.42%), Postives = 96/193 (49.74%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy Swiss-Prot
Match: Q12981 (Vesicle transport protein SEC20 OS=Homo sapiens OX=9606 GN=BNIP1 PE=1 SV=3) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 48/193 (24.87%), Postives = 95/193 (49.22%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy Swiss-Prot
Match: Q8VHI8 (Vesicle transport protein SEC20 OS=Rattus norvegicus OX=10116 GN=Bnip1 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 1.6e-06 Identity = 50/193 (25.91%), Postives = 96/193 (49.74%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy TrEMBL
Match: A0A5A7TE96 (Putative vesicle transporter Sec20 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002810 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy TrEMBL
Match: E5GCN4 (Vesicle transport protein SEC20 OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy TrEMBL
Match: A0A1S3CAG8 (uncharacterized protein LOC103498806 OS=Cucumis melo OX=3656 GN=LOC103498806 PE=4 SV=1) HSP 1 Score: 521.9 bits (1343), Expect = 1.7e-144 Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy TrEMBL
Match: A0A6J1H7T9 (uncharacterized protein LOC111461229 OS=Cucurbita moschata OX=3662 GN=LOC111461229 PE=4 SV=1) HSP 1 Score: 487.3 bits (1253), Expect = 4.6e-134 Identity = 266/292 (91.10%), Postives = 278/292 (95.21%), Query Frame = 0
BLAST of CSPI06G08180 vs. ExPASy TrEMBL
Match: A0A6J1KS49 (uncharacterized protein LOC111498164 OS=Cucurbita maxima OX=3661 GN=LOC111498164 PE=4 SV=1) HSP 1 Score: 486.9 bits (1252), Expect = 6.0e-134 Identity = 266/292 (91.10%), Postives = 276/292 (94.52%), Query Frame = 0
BLAST of CSPI06G08180 vs. NCBI nr
Match: XP_008459773.1 (PREDICTED: uncharacterized protein LOC103498806 [Cucumis melo] >ADN34233.1 vesicle transport protein SEC20 [Cucumis melo subsp. melo] >KAA0039775.1 putative vesicle transporter Sec20 [Cucumis melo var. makuwa] >TYK24722.1 putative vesicle transporter Sec20 [Cucumis melo var. makuwa]) HSP 1 Score: 521.9 bits (1343), Expect = 3.5e-144 Identity = 286/293 (97.61%), Postives = 290/293 (98.98%), Query Frame = 0
BLAST of CSPI06G08180 vs. NCBI nr
Match: XP_038875148.1 (uncharacterized protein LOC120067685 isoform X2 [Benincasa hispida]) HSP 1 Score: 503.4 bits (1295), Expect = 1.3e-138 Identity = 273/292 (93.49%), Postives = 283/292 (96.92%), Query Frame = 0
BLAST of CSPI06G08180 vs. NCBI nr
Match: XP_022960516.1 (uncharacterized protein LOC111461229 [Cucurbita moschata] >KAG6592931.1 Vesicle transport protein SEC20, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 487.3 bits (1253), Expect = 9.5e-134 Identity = 266/292 (91.10%), Postives = 278/292 (95.21%), Query Frame = 0
BLAST of CSPI06G08180 vs. NCBI nr
Match: XP_023005057.1 (uncharacterized protein LOC111498164 [Cucurbita maxima]) HSP 1 Score: 486.9 bits (1252), Expect = 1.2e-133 Identity = 266/292 (91.10%), Postives = 276/292 (94.52%), Query Frame = 0
BLAST of CSPI06G08180 vs. NCBI nr
Match: KAG7025339.1 (Vesicle transport protein SEC20 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 486.1 bits (1250), Expect = 2.1e-133 Identity = 265/292 (90.75%), Postives = 278/292 (95.21%), Query Frame = 0
BLAST of CSPI06G08180 vs. TAIR 10
Match: AT3G24315.1 (Sec20 family protein ) HSP 1 Score: 321.2 bits (822), Expect = 8.4e-88 Identity = 191/296 (64.53%), Postives = 227/296 (76.69%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|