CSPI06G08110 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G08110
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	F-box protein
Location	Chr6: 6818530 .. 6819681 (+)
RNA-Seq Expression	CSPI06G08110
Synteny	CSPI06G08110

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTTGGGAAGAGGGCTTCAACCGCATATTGTTGGTGAAATCTTGTGTAGGGTTGTCATCTCCAATTTGCCCAACTTGAGGCTTCTCTCTAAAGCTTGGAATCATTTTATCTTACATAACGCTCATCATTTCTTTTTTACAAACGCAAATGATTCATTTCTTCTCTCCACATGTGATCGAACTCCCAATAACAAAGATCTTTATCCTAAGATGCATTGTATCCGTTTTGATACTACCAAACATTTGGGTTTGGATTTGGAATCGGAATGGACTAAATCACCCTCCTTAACCTTTGATGGTGATTGGTTATTTATCTATATGAATGATAATTCCTGCAATGGTCTTGTCTTTATTTGTAAATGTGCTTTTCGTTCTCGTTGCGATGGCATATTCAATCCTTTGACTAATGAGTTCCTCCAAGTTCCTCGAGGTGAGTTTGACGGTGATAATTACTACTTTGGATTAGGTTTTAGCCCTACAACAAAACAATACAAATTGTTTCGAGTTACTGACTCATTCTTTGTTGATGGTAACTTTGACAATAACTCATCGATAATGAATGTTTTAAGCTTTAATAGAAGGAGTGAAACTAATCACAACCATAAACAATGGAGGCAACTCCACTCTATCCCTCTTCTCATGTGTAGTCATGGTGCTTACTTGAATGGTGTCATCTATTGGATGGGAAGAACAGAATTAGATAAACAAGATGAGTATCATGTATATGCTCTCAATGTTGAAACTGAACAGATTGAATTGAGCGCTATCTTGGATCTTGGTCCTTGCTCCACCTCCAAATTATCCTTGAACCAATTTAATGGCGGCATTTATGCATCTTTTATCATCAAGTCAACCACTAACTCTGTCATTCAAGTGTGGAAGATGCAAGAGAAAGATTTGTGGATTAGGGAATTTGTTATTGATGACATACCAAATAATTGGGGCTCCTTAACCCTTATCAAAGCCTTTGAGAATGGAGAGATATTGTGTATGGTTAATGGTGATTTTTTTTGTTGGTATAGTTCTTTCACTGGGAGGAAGAAGATTGTGACTAAGAATCAAAAGAAGTGTAGAAATGTGTGTCAAATAGAATATTTGAATTTCGGTTTGCTTCAAAATATTTTGGCAGGAAAAGAGACAAAAGAGTGA

mRNA sequence

ATGGAGTTGGGAAGAGGGCTTCAACCGCATATTGTTGGTGAAATCTTGTGTAGGGTTGTCATCTCCAATTTGCCCAACTTGAGGCTTCTCTCTAAAGCTTGGAATCATTTTATCTTACATAACGCTCATCATTTCTTTTTTACAAACGCAAATGATTCATTTCTTCTCTCCACATGTGATCGAACTCCCAATAACAAAGATCTTTATCCTAAGATGCATTGTATCCGTTTTGATACTACCAAACATTTGGGTTTGGATTTGGAATCGGAATGGACTAAATCACCCTCCTTAACCTTTGATGGTGATTGGTTATTTATCTATATGAATGATAATTCCTGCAATGGTCTTGTCTTTATTTGTAAATGTGCTTTTCGTTCTCGTTGCGATGGCATATTCAATCCTTTGACTAATGAGTTCCTCCAAGTTCCTCGAGGTGAGTTTGACGGTGATAATTACTACTTTGGATTAGGTTTTAGCCCTACAACAAAACAATACAAATTGTTTCGAGTTACTGACTCATTCTTTGTTGATGGTAACTTTGACAATAACTCATCGATAATGAATGTTTTAAGCTTTAATAGAAGGAGTGAAACTAATCACAACCATAAACAATGGAGGCAACTCCACTCTATCCCTCTTCTCATGTGTAGTCATGGTGCTTACTTGAATGGTGTCATCTATTGGATGGGAAGAACAGAATTAGATAAACAAGATGAGTATCATGTATATGCTCTCAATGTTGAAACTGAACAGATTGAATTGAGCGCTATCTTGGATCTTGGTCCTTGCTCCACCTCCAAATTATCCTTGAACCAATTTAATGGCGGCATTTATGCATCTTTTATCATCAAGTCAACCACTAACTCTGTCATTCAAGTGTGGAAGATGCAAGAGAAAGATTTGTGGATTAGGGAATTTGTTATTGATGACATACCAAATAATTGGGGCTCCTTAACCCTTATCAAAGCCTTTGAGAATGGAGAGATATTGTGTATGGTTAATGGTGATTTTTTTTGTTGGTATAGTTCTTTCACTGGGAGGAAGAAGATTGTGACTAAGAATCAAAAGAAGTGTAGAAATGTGTGTCAAATAGAATATTTGAATTTCGGTTTGCTTCAAAATATTTTGGCAGGAAAAGAGACAAAAGAGTGA

Coding sequence (CDS)

ATGGAGTTGGGAAGAGGGCTTCAACCGCATATTGTTGGTGAAATCTTGTGTAGGGTTGTCATCTCCAATTTGCCCAACTTGAGGCTTCTCTCTAAAGCTTGGAATCATTTTATCTTACATAACGCTCATCATTTCTTTTTTACAAACGCAAATGATTCATTTCTTCTCTCCACATGTGATCGAACTCCCAATAACAAAGATCTTTATCCTAAGATGCATTGTATCCGTTTTGATACTACCAAACATTTGGGTTTGGATTTGGAATCGGAATGGACTAAATCACCCTCCTTAACCTTTGATGGTGATTGGTTATTTATCTATATGAATGATAATTCCTGCAATGGTCTTGTCTTTATTTGTAAATGTGCTTTTCGTTCTCGTTGCGATGGCATATTCAATCCTTTGACTAATGAGTTCCTCCAAGTTCCTCGAGGTGAGTTTGACGGTGATAATTACTACTTTGGATTAGGTTTTAGCCCTACAACAAAACAATACAAATTGTTTCGAGTTACTGACTCATTCTTTGTTGATGGTAACTTTGACAATAACTCATCGATAATGAATGTTTTAAGCTTTAATAGAAGGAGTGAAACTAATCACAACCATAAACAATGGAGGCAACTCCACTCTATCCCTCTTCTCATGTGTAGTCATGGTGCTTACTTGAATGGTGTCATCTATTGGATGGGAAGAACAGAATTAGATAAACAAGATGAGTATCATGTATATGCTCTCAATGTTGAAACTGAACAGATTGAATTGAGCGCTATCTTGGATCTTGGTCCTTGCTCCACCTCCAAATTATCCTTGAACCAATTTAATGGCGGCATTTATGCATCTTTTATCATCAAGTCAACCACTAACTCTGTCATTCAAGTGTGGAAGATGCAAGAGAAAGATTTGTGGATTAGGGAATTTGTTATTGATGACATACCAAATAATTGGGGCTCCTTAACCCTTATCAAAGCCTTTGAGAATGGAGAGATATTGTGTATGGTTAATGGTGATTTTTTTTGTTGGTATAGTTCTTTCACTGGGAGGAAGAAGATTGTGACTAAGAATCAAAAGAAGTGTAGAAATGTGTGTCAAATAGAATATTTGAATTTCGGTTTGCTTCAAAATATTTTGGCAGGAAAAGAGACAAAAGAGTGA

Protein sequence

MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCDRTPNNKDLYPKMHCIRFDTTKHLGLDLESEWTKSPSLTFDGDWLFIYMNDNSCNGLVFICKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGNFDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDEYHVYALNVETEQIELSAILDLGPCSTSKLSLNQFNGGIYASFIIKSTTNSVIQVWKMQEKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVTKNQKKCRNVCQIEYLNFGLLQNILAGKETKE*

Homology

[Close]

BLAST of CSPI06G08110 vs. ExPASy TrEMBL
Match: A0A5A7TE00 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003130 PE=4 SV=1)

HSP 1 Score: 592.4 bits (1526), Expect = 1.3e-165
Identity = 294/384 (76.56%), Postives = 326/384 (84.90%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL  HIV EIL  VVISN PNLR++SK WN FIL  AH F  TNAN +FLLSTCD
Sbjct: 4   MKLGRGLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTCD 63

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEW-TKSPSLTFDGDWLFIYMNDNSCNGLVFI 120
           RTPNNKDL  KMHCIRFDTT HL  DLESEW TKSPSL+FDGDW FI + DNSCNGLVFI
Sbjct: 64  RTPNNKDLNHKMHCIRFDTTTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 123

Query: 121 CKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGN 180
           CKCAF +RCDGIFNP+TNEF Q+PRGE DGD Y + LGFSPTTKQYKLFRVT+SFF+DG+
Sbjct: 124 CKCAFFTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFFLDGD 183

Query: 181 FDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDE 240
            DNNSSIM+VL+F RRSETNHNH QWR+LHS+PL +  +GAYLNGVIYW+G T+ DK++E
Sbjct: 184 ADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRI-HNGAYLNGVIYWIG-TKEDKENE 243

Query: 241 YHVYALNVETEQIELSAILDLGPCSTSK-LSLNQFNGGIYASFIIK-STTNSVIQVWKMQ 300
           Y +YA+NVETE IELS ILDLGPCSTS   SL QFN  +YA+F I   T NS IQVW+MQ
Sbjct: 244 YIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQVWRMQ 303

Query: 301 EKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVTKNQKK 360
           EKDLWIREFVI DIP NW SLTLIKAFE+GEILCM+N DFFCWY+SFTGRKKIVTKNQKK
Sbjct: 304 EKDLWIREFVIVDIPINWSSLTLIKAFEDGEILCMINLDFFCWYNSFTGRKKIVTKNQKK 363

Query: 361 CRNVCQIEYLNFGLLQNILAGKET 382
            R VCQIEYLNFGLLQNILAG+ET
Sbjct: 364 DRRVCQIEYLNFGLLQNILAGEET 384

[Close]

BLAST of CSPI06G08110 vs. ExPASy TrEMBL
Match: A0A5D3DMB7 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140 PE=4 SV=1)

HSP 1 Score: 568.2 bits (1463), Expect = 2.7e-158
Identity = 285/391 (72.89%), Postives = 321/391 (82.10%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL PHIV EIL R+VISNLPNLR++SK WN FIL  AH F  TNAN +FLLST D
Sbjct: 15  MKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTSD 74

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGL----DLESEWTKSPSLTFDGDWLFIYMNDNSCNGL 120
             P NKDL PKM+CI FDTTKHL L    DLE EWTK PSL+FDGDW FI M DNSCNGL
Sbjct: 75  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 134

Query: 121 VFICKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFV 180
           VFI KCAF SR DGIFNP+TNEFLQVPR E DGDNY++GLGFSPTTKQYK+FRV      
Sbjct: 135 VFIRKCAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRV------ 194

Query: 181 DGNFDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDK 240
             N +NNSSIM +L+F RRSETN+ + QWRQLHS+P+L+C  G YLNG IYWMGR +  K
Sbjct: 195 --NPNNNSSIMYILTF-RRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQY-K 254

Query: 241 QDEYHVYALNVETEQIELSAILDLGPCSTSKL---SLNQFNGGIYASFII-KSTTNSVIQ 300
           ++EY +YALNVETEQIELSA+L LGP STS +   SL QFNG +YA+F I   T NSVIQ
Sbjct: 255 ENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQ 314

Query: 301 VWKMQEKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVT 360
           VW+MQEKDLWI+EFVIDDIPNNW SLTLIKAFE+GEILCMVN DFFCWY+SFTGRKKIVT
Sbjct: 315 VWRMQEKDLWIKEFVIDDIPNNWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT 374

Query: 361 KNQKKCRNVCQIEYLNFGLLQNILAGKETKE 384
           KNQKKCR VC+IEYLNFGLL NILAG+E+++
Sbjct: 375 KNQKKCRYVCEIEYLNFGLLPNILAGEESEK 394

[Close]

BLAST of CSPI06G08110 vs. ExPASy TrEMBL
Match: A0A5A7TCF3 (F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 PE=4 SV=1)

HSP 1 Score: 561.6 bits (1446), Expect = 2.5e-156
Identity = 284/391 (72.63%), Postives = 319/391 (81.59%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL PHIV EIL R+VISNLPNLR++SK WN FIL  AH F  TNAN +FLLST D
Sbjct: 12  MKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTSD 71

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGL----DLESEWTKSPSLTFDGDWLFIYMNDNSCNGL 120
             P NKDL PKM+CI FDTTKHL L    DLE EWTK PSL+FDGDW FI M DNSCNGL
Sbjct: 72  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 131

Query: 121 VFICKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFV 180
           VFI KCAF S  DGIFNP+TNEFLQVPR E DGDNY++GLGFSPTTKQYK+FRV      
Sbjct: 132 VFIRKCAFFS--DGIFNPMTNEFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRV------ 191

Query: 181 DGNFDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDK 240
             N +NNSSIM +L+F RRSETN+ + QWRQLHS+P+L+C  G YLNG IYWMGR +  K
Sbjct: 192 --NPNNNSSIMYILTF-RRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQY-K 251

Query: 241 QDEYHVYALNVETEQIELSAILDLGPCSTSKL---SLNQFNGGIYASFII-KSTTNSVIQ 300
           ++EY +YALNVETEQIELSA+L LGP STS +   SL QFNG +YA+F I   T NSVIQ
Sbjct: 252 ENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQ 311

Query: 301 VWKMQEKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVT 360
           VW+MQEKDLWI+EFVIDDIPNNW SLTLIKAFE+GEILCMVN DFFCWY+SFTGRKKIVT
Sbjct: 312 VWRMQEKDLWIKEFVIDDIPNNWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT 371

Query: 361 KNQKKCRNVCQIEYLNFGLLQNILAGKETKE 384
           KNQKKCR VC+IEYLNFGLL NILAG+E ++
Sbjct: 372 KNQKKCRYVCEIEYLNFGLLPNILAGEELEK 389

[Close]

BLAST of CSPI06G08110 vs. ExPASy TrEMBL
Match: A0A1S3CCE7 (uncharacterized protein LOC103499068 OS=Cucumis melo OX=3656 GN=LOC103499068 PE=4 SV=1)

HSP 1 Score: 548.9 bits (1413), Expect = 1.7e-152
Identity = 282/384 (73.44%), Postives = 312/384 (81.25%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL  HIV EIL  VVISN PNLR++SK WN FIL  AH F  TNAN +FLLSTCD
Sbjct: 4   MKLGRGLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTCD 63

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEW-TKSPSLTFDGDWLFIYMNDNSCNGLVFI 120
           RTPNNKDL  KMHCIRFDTT HL  DLESEW TKSPSL+FDGDW FI + DNSCNGLVFI
Sbjct: 64  RTPNNKDLNHKMHCIRFDTTTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 123

Query: 121 CKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGN 180
           CKCAF +RCDGIFNP+TNEF Q+PRGE DGD Y + LGFSPTTKQYKLFRVT+SFF+DG+
Sbjct: 124 CKCAFFTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFFLDGD 183

Query: 181 FDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDE 240
            DNNSSIM+VL+F RRSETNHNH QWR+LHS+PL +  +GAYLNGVIYW+G T+ DK++E
Sbjct: 184 ADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRI-HNGAYLNGVIYWIG-TKEDKENE 243

Query: 241 YHVYALNVETEQIELSAILDLGPCSTSK-LSLNQFNGGIYASFIIK-STTNSVIQVWKMQ 300
           Y +YA+NVETE IELS ILDLGPCSTS   SL QFN  +YA+F I   T NS IQVW+MQ
Sbjct: 244 YIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQVWRMQ 303

Query: 301 EKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVTKNQKK 360
           EKDLWIREFVI DIP NW SLTLIKAFE+GEIL         W      RKKIVTKNQKK
Sbjct: 304 EKDLWIREFVIVDIPINWSSLTLIKAFEDGEIL---------W------RKKIVTKNQKK 363

Query: 361 CRNVCQIEYLNFGLLQNILAGKET 382
            R VCQIEYLNFGLLQNILAG+ET
Sbjct: 364 DRRVCQIEYLNFGLLQNILAGEET 369

[Close]

BLAST of CSPI06G08110 vs. ExPASy TrEMBL
Match: A0A0A0K9U2 (F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G102760 PE=4 SV=1)

HSP 1 Score: 469.5 bits (1207), Expect = 1.3e-128
Identity = 214/227 (94.27%), Postives = 222/227 (97.80%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           MELGRGL PHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNAND+FLLSTCD
Sbjct: 1   MELGRGLPPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDAFLLSTCD 60

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEWTKSPSLTFDGDWLFIYMNDNSCNGLVFIC 120
           RTPNNKDLYPKMHCIRFDTTKHLGLDLESEWTKSPSLT DGDWLFIYMNDNSCNGLVFIC
Sbjct: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEWTKSPSLTLDGDWLFIYMNDNSCNGLVFIC 120

Query: 121 KCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGNF 180
           KCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFF+DGNF
Sbjct: 121 KCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFIDGNF 180

Query: 181 DNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIY 228
           DNNSSIM+VL F+RRSETNHN+ QWRQLHSIP ++CSHGAYLNG+IY
Sbjct: 181 DNNSSIMDVLHFSRRSETNHNYNQWRQLHSIPPIICSHGAYLNGIIY 227

[Close]

BLAST of CSPI06G08110 vs. NCBI nr
Match: KGN46442.2 (hypothetical protein Csa_005435 [Cucumis sativus])

HSP 1 Score: 613.6 bits (1581), Expect = 1.2e-171
Identity = 289/334 (86.53%), Postives = 309/334 (92.51%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           MELGRGL PHIVGEILCRVVISN PNLRLLSKAWNHFILHNAH FFFTNAND+FLLSTCD
Sbjct: 249 MELGRGLPPHIVGEILCRVVISNFPNLRLLSKAWNHFILHNAHDFFFTNANDAFLLSTCD 308

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEWTKSPSLTFDGDWLFIYMNDNSCNGLVFIC 120
           RTP+NKDL PKMHCIRFDTTKHLGLDLESEWTKSPSLTFDGDW FIYMNDNSCNGLVF+C
Sbjct: 309 RTPDNKDLNPKMHCIRFDTTKHLGLDLESEWTKSPSLTFDGDWSFIYMNDNSCNGLVFLC 368

Query: 121 KCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGNF 180
           K AF SR DGIFNP+TNEF QVPR EFDGDNY+FGLGFSP TKQYKLFRVTDSFF+DGNF
Sbjct: 369 KGAFYSRHDGIFNPMTNEFFQVPRSEFDGDNYHFGLGFSPITKQYKLFRVTDSFFIDGNF 428

Query: 181 DNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDEY 240
           DNNSSIM+VL F+RRSETNHN+ QWRQLHSIP ++CSHGAYLNG IYW+G TELDKQDEY
Sbjct: 429 DNNSSIMDVLHFSRRSETNHNYNQWRQLHSIPPIICSHGAYLNGAIYWIGITELDKQDEY 488

Query: 241 HVYALNVETEQIELSAILDLG-PCSTSKLSLNQFNGGIYASFIIKSTTNSVIQVWKMQEK 300
           HVYAL+VETEQI+LSA+LDLG PCS SKLSL QFNG IYASF+I     +VIQVWKM+EK
Sbjct: 489 HVYALDVETEQIKLSAVLDLGCPCSISKLSLQQFNGSIYASFLI-----NVIQVWKMEEK 548

Query: 301 DLWIREFVIDDIPNNWGSLTLIKAFENGEILCMV 334
           DLWI+EFVIDDIPNNWGSLTLIKAFENGEILCM+
Sbjct: 549 DLWIKEFVIDDIPNNWGSLTLIKAFENGEILCMI 577

[Close]

BLAST of CSPI06G08110 vs. NCBI nr
Match: KAA0039747.1 (F-box protein [Cucumis melo var. makuwa] >TYK24750.1 F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 592.4 bits (1526), Expect = 2.7e-165
Identity = 294/384 (76.56%), Postives = 326/384 (84.90%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL  HIV EIL  VVISN PNLR++SK WN FIL  AH F  TNAN +FLLSTCD
Sbjct: 4   MKLGRGLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTCD 63

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEW-TKSPSLTFDGDWLFIYMNDNSCNGLVFI 120
           RTPNNKDL  KMHCIRFDTT HL  DLESEW TKSPSL+FDGDW FI + DNSCNGLVFI
Sbjct: 64  RTPNNKDLNHKMHCIRFDTTTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 123

Query: 121 CKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGN 180
           CKCAF +RCDGIFNP+TNEF Q+PRGE DGD Y + LGFSPTTKQYKLFRVT+SFF+DG+
Sbjct: 124 CKCAFFTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFFLDGD 183

Query: 181 FDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDE 240
            DNNSSIM+VL+F RRSETNHNH QWR+LHS+PL +  +GAYLNGVIYW+G T+ DK++E
Sbjct: 184 ADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRI-HNGAYLNGVIYWIG-TKEDKENE 243

Query: 241 YHVYALNVETEQIELSAILDLGPCSTSK-LSLNQFNGGIYASFIIK-STTNSVIQVWKMQ 300
           Y +YA+NVETE IELS ILDLGPCSTS   SL QFN  +YA+F I   T NS IQVW+MQ
Sbjct: 244 YIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQVWRMQ 303

Query: 301 EKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVTKNQKK 360
           EKDLWIREFVI DIP NW SLTLIKAFE+GEILCM+N DFFCWY+SFTGRKKIVTKNQKK
Sbjct: 304 EKDLWIREFVIVDIPINWSSLTLIKAFEDGEILCMINLDFFCWYNSFTGRKKIVTKNQKK 363

Query: 361 CRNVCQIEYLNFGLLQNILAGKET 382
            R VCQIEYLNFGLLQNILAG+ET
Sbjct: 364 DRRVCQIEYLNFGLLQNILAGEET 384

[Close]

BLAST of CSPI06G08110 vs. NCBI nr
Match: TYK24751.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 568.2 bits (1463), Expect = 5.5e-158
Identity = 285/391 (72.89%), Postives = 321/391 (82.10%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL PHIV EIL R+VISNLPNLR++SK WN FIL  AH F  TNAN +FLLST D
Sbjct: 15  MKLGRGLPPHIVREILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTSD 74

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGL----DLESEWTKSPSLTFDGDWLFIYMNDNSCNGL 120
             P NKDL PKM+CI FDTTKHL L    DLE EWTK PSL+FDGDW FI M DNSCNGL
Sbjct: 75  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 134

Query: 121 VFICKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFV 180
           VFI KCAF SR DGIFNP+TNEFLQVPR E DGDNY++GLGFSPTTKQYK+FRV      
Sbjct: 135 VFIRKCAFFSRSDGIFNPMTNEFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRV------ 194

Query: 181 DGNFDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDK 240
             N +NNSSIM +L+F RRSETN+ + QWRQLHS+P+L+C  G YLNG IYWMGR +  K
Sbjct: 195 --NPNNNSSIMYILTF-RRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQY-K 254

Query: 241 QDEYHVYALNVETEQIELSAILDLGPCSTSKL---SLNQFNGGIYASFII-KSTTNSVIQ 300
           ++EY +YALNVETEQIELSA+L LGP STS +   SL QFNG +YA+F I   T NSVIQ
Sbjct: 255 ENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQ 314

Query: 301 VWKMQEKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVT 360
           VW+MQEKDLWI+EFVIDDIPNNW SLTLIKAFE+GEILCMVN DFFCWY+SFTGRKKIVT
Sbjct: 315 VWRMQEKDLWIKEFVIDDIPNNWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT 374

Query: 361 KNQKKCRNVCQIEYLNFGLLQNILAGKETKE 384
           KNQKKCR VC+IEYLNFGLL NILAG+E+++
Sbjct: 375 KNQKKCRYVCEIEYLNFGLLPNILAGEESEK 394

[Close]

BLAST of CSPI06G08110 vs. NCBI nr
Match: KAA0039746.1 (F-box protein [Cucumis melo var. makuwa])

HSP 1 Score: 561.6 bits (1446), Expect = 5.2e-156
Identity = 284/391 (72.63%), Postives = 319/391 (81.59%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL PHIV EIL R+VISNLPNLR++SK WN FIL  AH F  TNAN +FLLST D
Sbjct: 12  MKLGRGLPPHIVSEILRRLVISNLPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTSD 71

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGL----DLESEWTKSPSLTFDGDWLFIYMNDNSCNGL 120
             P NKDL PKM+CI FDTTKHL L    DLE EWTK PSL+FDGDW FI M DNSCNGL
Sbjct: 72  TGPGNKDLNPKMYCIHFDTTKHLDLDLDFDLELEWTKPPSLSFDGDWSFIPMMDNSCNGL 131

Query: 121 VFICKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFV 180
           VFI KCAF S  DGIFNP+TNEFLQVPR E DGDNY++GLGFSPTTKQYK+FRV      
Sbjct: 132 VFIRKCAFFS--DGIFNPMTNEFLQVPRHELDGDNYFYGLGFSPTTKQYKMFRV------ 191

Query: 181 DGNFDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDK 240
             N +NNSSIM +L+F RRSETN+ + QWRQLHS+P+L+C  G YLNG IYWMGR +  K
Sbjct: 192 --NPNNNSSIMYILTF-RRSETNYKYNQWRQLHSLPILICCDGVYLNGFIYWMGRKQY-K 251

Query: 241 QDEYHVYALNVETEQIELSAILDLGPCSTSKL---SLNQFNGGIYASFII-KSTTNSVIQ 300
           ++EY +YALNVETEQIELSA+L LGP STS +   SL QFNG +YA+F I   T NSVIQ
Sbjct: 252 ENEYTIYALNVETEQIELSAVLHLGPFSTSSIPGVSLKQFNGSVYATFYIDPKTCNSVIQ 311

Query: 301 VWKMQEKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVT 360
           VW+MQEKDLWI+EFVIDDIPNNW SLTLIKAFE+GEILCMVN DFFCWY+SFTGRKKIVT
Sbjct: 312 VWRMQEKDLWIKEFVIDDIPNNWCSLTLIKAFEDGEILCMVNLDFFCWYNSFTGRKKIVT 371

Query: 361 KNQKKCRNVCQIEYLNFGLLQNILAGKETKE 384
           KNQKKCR VC+IEYLNFGLL NILAG+E ++
Sbjct: 372 KNQKKCRYVCEIEYLNFGLLPNILAGEELEK 389

[Close]

BLAST of CSPI06G08110 vs. NCBI nr
Match: XP_008460183.1 (PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo])

HSP 1 Score: 548.9 bits (1413), Expect = 3.5e-152
Identity = 282/384 (73.44%), Postives = 312/384 (81.25%), Query Frame = 0


Query: 1   MELGRGLQPHIVGEILCRVVISNLPNLRLLSKAWNHFILHNAHHFFFTNANDSFLLSTCD 60
           M+LGRGL  HIV EIL  VVISN PNLR++SK WN FIL  AH F  TNAN +FLLSTCD
Sbjct: 4   MKLGRGLPHHIVREILRWVVISNFPNLRVVSKTWNLFILDYAHEFSSTNAN-AFLLSTCD 63

Query: 61  RTPNNKDLYPKMHCIRFDTTKHLGLDLESEW-TKSPSLTFDGDWLFIYMNDNSCNGLVFI 120
           RTPNNKDL  KMHCIRFDTT HL  DLESEW TKSPSL+FDGDW FI + DNSCNGLVFI
Sbjct: 64  RTPNNKDLNHKMHCIRFDTTTHLDFDLESEWTTKSPSLSFDGDWPFISLVDNSCNGLVFI 123

Query: 121 CKCAFRSRCDGIFNPLTNEFLQVPRGEFDGDNYYFGLGFSPTTKQYKLFRVTDSFFVDGN 180
           CKCAF +RCDGIFNP+TNEF Q+PRGE DGD Y + LGFSPTTKQYKLFRVT+SFF+DG+
Sbjct: 124 CKCAFFTRCDGIFNPMTNEFFQIPRGELDGDIYSYELGFSPTTKQYKLFRVTESFFLDGD 183

Query: 181 FDNNSSIMNVLSFNRRSETNHNHKQWRQLHSIPLLMCSHGAYLNGVIYWMGRTELDKQDE 240
            DNNSSIM+VL+F RRSETNHNH QWR+LHS+PL +  +GAYLNGVIYW+G T+ DK++E
Sbjct: 184 ADNNSSIMDVLTFTRRSETNHNHSQWRRLHSLPLRI-HNGAYLNGVIYWIG-TKEDKENE 243

Query: 241 YHVYALNVETEQIELSAILDLGPCSTSK-LSLNQFNGGIYASFIIK-STTNSVIQVWKMQ 300
           Y +YA+NVETE IELS ILDLGPCSTS   SL QFN  +YA+F I   T NS IQVW+MQ
Sbjct: 244 YIIYAVNVETELIELSFILDLGPCSTSSHASLKQFNSSVYATFFINPKTYNSSIQVWRMQ 303

Query: 301 EKDLWIREFVIDDIPNNWGSLTLIKAFENGEILCMVNGDFFCWYSSFTGRKKIVTKNQKK 360
           EKDLWIREFVI DIP NW SLTLIKAFE+GEIL         W      RKKIVTKNQKK
Sbjct: 304 EKDLWIREFVIVDIPINWSSLTLIKAFEDGEIL---------W------RKKIVTKNQKK 363

Query: 361 CRNVCQIEYLNFGLLQNILAGKET 382
            R VCQIEYLNFGLLQNILAG+ET
Sbjct: 364 DRRVCQIEYLNFGLLQNILAGEET 369

The following BLAST results are available for this feature:

BLAST of CSPI06G08110 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G08110 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TE00	1.3e-165	76.56	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003130...	[more]
A0A5D3DMB7	2.7e-158	72.89	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G003140...	[more]
A0A5A7TCF3	2.5e-156	72.63	F-box protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00060 ...	[more]
A0A1S3CCE7	1.7e-152	73.44	uncharacterized protein LOC103499068 OS=Cucumis melo OX=3656 GN=LOC103499068 PE=...	[more]
A0A0A0K9U2	1.3e-128	94.27	F-box domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G102760 PE=4 ...	[more]

BLAST of CSPI06G08110 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN46442.2	1.2e-171	86.53	hypothetical protein Csa_005435 [Cucumis sativus]	[more]
KAA0039747.1	2.7e-165	76.56	F-box protein [Cucumis melo var. makuwa] >TYK24750.1 F-box protein [Cucumis melo...	[more]
TYK24751.1	5.5e-158	72.89	F-box protein [Cucumis melo var. makuwa]	[more]
KAA0039746.1	5.2e-156	72.63	F-box protein [Cucumis melo var. makuwa]	[more]
XP_008460183.1	3.5e-152	73.44	PREDICTED: uncharacterized protein LOC103499068 [Cucumis melo]	[more]

BLAST of CSPI06G08110 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013187	F-box associated domain, type 3	PFAM	PF08268	FBA_3	coord: 220..332 e-value: 4.7E-5 score: 23.3
IPR017451	F-box associated interaction domain	TIGRFAM	TIGR01640	TIGR01640	coord: 112..333 e-value: 3.1E-20 score: 70.4
None	No IPR available	PANTHER	PTHR47993	OS09G0372900 PROTEIN-RELATED	coord: 10..321
None	No IPR available	PANTHER	PTHR47993:SF20	F-BOX FAMILY PROTEIN	coord: 10..321

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G08110.1	CSPI06G08110.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
cellular_component	GO:0005886	plasma membrane
molecular_function	GO:0046872	metal ion binding
molecular_function	GO:0016491	oxidoreductase activity