CSPI06G08090 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G08090
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	major pollen allergen Ole e 6-like
Location	Chr6: 6805493 .. 6806355 (-)
RNA-Seq Expression	CSPI06G08090
Synteny	CSPI06G08090

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATCCACAGCAAGACCTAAAAGAATCACCAAAGCCAAGAAACAACAAAAAAAAAATGGCCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAACCACTTTGCAATTTGCCACTGCCAATAAGGAGTATGAAGTGGCCAATTACGAAGCCAAATTTGATGCCAAGTACAAGGCTTGCTTTGTAACTTGTGAGAAAGAATGCGTTGAACGTGGAAGTGGCCATAGTTATTGTGAAGTTAAATGCGACGAAGATTGTGGTGCAAAAGAAGCTGCCGGTACTCATCTCATCCTCTCTTATCTTTCTTTTACTTCTAACATGTTAAATTTAAATTATGATGTAAGTTTAGAATGTACTAACATTATATTTCCATTCTATCGTTTTAAGAAAATTAATCGACGATATATTAACAAAATTTACAATATCTTTGATATACATTTTTTCTTTATTCTTGTAGATTTGTAAATAAAATTTATTCACTATATTTAATTTTAATTGTTGTATTTGTTTTGCAGATAAGTTGCATATCCATTAGCATTGAATAATATGGACAAAAAGGAAAGAAGAGCTCTTGTGAAGGATCAAGTAGTAATTAATATTATATCGAAATTAAACTTGTAATGTGATTCCAATATTGGGATTATAAAGTTTTTTGGTCTTTGGTGTACTTATTGATATGTGAATCCACATGGTAACGATTTTCTATACTAATTGTCAACATCTCTAATTAATTGGGATTATTAATTAGAGATGACTATTTAAAACTTAGAATATATAGTTTTTGCTAAAGTTATTTAAAGAATACCAACAAAAGAACTTTAAGAAGTGAATGATGAAAGAAAAAACTTGTATTTAACT

mRNA sequence

ATCCACAGCAAGACCTAAAAGAATCACCAAAGCCAAGAAACAACAAAAAAAAAATGGCCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAACCACTTTGCAATTTGCCACTGCCAATAAGGAGTATGAAGTGGCCAATTACGAAGCCAAATTTGATGCCAAGTACAAGGCTTGCTTTGTAACTTGTGAGAAAGAATGCGTTGAACGTGGAAGTGGCCATAGTTATTGTGAAGTTAAATGCGACGAAGATTGTGGTGCAAAAGAAGCTGCCGATAAGTTGCATATCCATTAGCATTGAATAATATGGACAAAAAGGAAAGAAGAGCTCTTGTGAAGGATCAAGTAGTAATTAATATTATATCGAAATTAAACTTGTAATGTGATTCCAATATTGGGATTATAAAGTTTTTTGGTCTTTGGTGTACTTATTGATATGTGAATCCACATGGTAACGATTTTCTATACTAATTGTCAACATCTCTAATTAATTGGGATTATTAATTAGAGATGACTATTTAAAACTTAGAATATATAGTTTTTGCTAAAGTTATTTAAAGAATACCAACAAAAGAACTTTAAGAAGTGAATGATGAAAGAAAAAACTTGTATTTAACT

Coding sequence (CDS)

ATGGCCAAGAAAATGATGGCAGTGTTTTTGATGTGCATTGTGGTGGTAACCACTTTGCAATTTGCCACTGCCAATAAGGAGTATGAAGTGGCCAATTACGAAGCCAAATTTGATGCCAAGTACAAGGCTTGCTTTGTAACTTGTGAGAAAGAATGCGTTGAACGTGGAAGTGGCCATAGTTATTGTGAAGTTAAATGCGACGAAGATTGTGGTGCAAAAGAAGCTGCCGATAAGTTGCATATCCATTAG

Protein sequence

MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHSYCEVKCDEDCGAKEAADKLHIH*

Homology

[Close]

BLAST of CSPI06G08090 vs. ExPASy Swiss-Prot
Match: O24172 (Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1)

HSP 1 Score: 57.4 bits (137), Expect = 9.0e-08
Identity = 20/42 (47.62%), Postives = 32/42 (76.19%), Query Frame = 0


Query: 38 DAKYKACFVTCEKECVERGSGHSYCEVKCDEDCGAKEAADKL 80
          +A++K C+ TC KEC ++G+G ++CE+KCD DC  K+  +KL
Sbjct: 2  EAQFKECYDTCHKECSDKGNGFTFCEMKCDTDCSVKDVKEKL 43

[Close]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL
Match: A0A0A0KDP7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1)

HSP 1 Score: 166.0 bits (419), Expect = 6.6e-38
Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVVT+LQFATANKEYEVA+YEAKFDAKYKACFVTCEKEC+ERGSGHS
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 YCEVKCDEDCGAKEAADKLHIH 83
          YCEVKCDEDCGAKEAADKLHIH
Sbjct: 61 YCEVKCDEDCGAKEAADKLHIH 82

[Close]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL
Match: A0A5A7T8P0 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002620 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.8e-34
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVV TLQFATANKE EVANYEAKFDAKYKACFV CEKECVERG GHS
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKFDAKYKACFVICEKECVERGGGHS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDCGAKEAADKL I
Sbjct: 61 YCEVKCDEDCGAKEAADKLGI 81

[Close]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL
Match: A0A1S3CAJ3 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 5.8e-34
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVV TLQFATANKE EVANYEAKFDAKYKACFV CEKECVERG GHS
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKFDAKYKACFVICEKECVERGGGHS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDCGAKEAADKL I
Sbjct: 61 YCEVKCDEDCGAKEAADKLGI 81

[Close]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL
Match: A0A5D3BCS2 (Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold233G00230 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-29
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKM+A+FLMCIVVV  LQFA+ANKE EVA YEAKFDAKYK+CF TCEKEC+E GSG S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDC  KE ADKLHI
Sbjct: 61 YCEVKCDEDCNEKEVADKLHI 81

[Close]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL
Match: A0A1S3C530 (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 SV=1)

HSP 1 Score: 136.7 bits (343), Expect = 4.3e-29
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKM+A+FLMCIVVV  LQFA+ANKE EVA YEAKFDAKYK+CF TCEKEC+E GSG S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDC  KE ADKLHI
Sbjct: 61 YCEVKCDEDCNEKEVADKLHI 81

[Close]

BLAST of CSPI06G08090 vs. NCBI nr
Match: XP_004140522.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN46487.1 hypothetical protein Csa_005056 [Cucumis sativus])

HSP 1 Score: 166.0 bits (419), Expect = 1.4e-37
Identity = 79/82 (96.34%), Postives = 82/82 (100.00%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVVT+LQFATANKEYEVA+YEAKFDAKYKACFVTCEKEC+ERGSGHS
Sbjct: 1  MAKKMMAVFLMCIVVVTSLQFATANKEYEVASYEAKFDAKYKACFVTCEKECIERGSGHS 60

Query: 61 YCEVKCDEDCGAKEAADKLHIH 83
          YCEVKCDEDCGAKEAADKLHIH
Sbjct: 61 YCEVKCDEDCGAKEAADKLHIH 82

[Close]

BLAST of CSPI06G08090 vs. NCBI nr
Match: XP_008459802.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0039792.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYK24705.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 152.9 bits (385), Expect = 1.2e-33
Identity = 76/81 (93.83%), Postives = 76/81 (93.83%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVV TLQFATANKE EVANYEAKFDAKYKACFV CEKECVERG GHS
Sbjct: 1  MAKKMMAVFLMCIVVVATLQFATANKEDEVANYEAKFDAKYKACFVICEKECVERGGGHS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDCGAKEAADKL I
Sbjct: 61 YCEVKCDEDCGAKEAADKLGI 81

[Close]

BLAST of CSPI06G08090 vs. NCBI nr
Match: XP_008456958.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa] >TYJ96804.1 major pollen allergen Ole e 6-like [Cucumis melo var. makuwa])

HSP 1 Score: 136.7 bits (343), Expect = 8.9e-29
Identity = 66/81 (81.48%), Postives = 71/81 (87.65%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKM+A+FLMCIVVV  LQFA+ANKE EVA YEAKFDAKYK+CF TCEKEC+E GSG S
Sbjct: 1  MAKKMIALFLMCIVVVAALQFASANKEDEVAKYEAKFDAKYKSCFKTCEKECLENGSGQS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDC  KE ADKLHI
Sbjct: 61 YCEVKCDEDCNEKEVADKLHI 81

[Close]

BLAST of CSPI06G08090 vs. NCBI nr
Match: XP_004146471.1 (major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein Csa_005859 [Cucumis sativus])

HSP 1 Score: 128.6 bits (322), Expect = 2.4e-26
Identity = 64/81 (79.01%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MA KM+A+FLMCIVVV  LQFA ANKE +VA YEAKFDAKYK+CF TCEKEC+  GSG S
Sbjct: 1  MANKMIALFLMCIVVVAALQFANANKE-DVAKYEAKFDAKYKSCFETCEKECLRYGSGQS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          YCEVKCDEDC  KEAADKLHI
Sbjct: 61 YCEVKCDEDCDEKEAADKLHI 80

[Close]

BLAST of CSPI06G08090 vs. NCBI nr
Match: XP_038891517.1 (major pollen allergen Ole e 6-like [Benincasa hispida])

HSP 1 Score: 128.3 bits (321), Expect = 3.2e-26
Identity = 63/81 (77.78%), Postives = 69/81 (85.19%), Query Frame = 0


Query: 1  MAKKMMAVFLMCIVVVTTLQFATANKEYEVANYEAKFDAKYKACFVTCEKECVERGSGHS 60
          MAKKMMAVFLMCIVVV  LQFATAN++ EV  YEAKFDAKYK+C+ TCEKEC+  GSG S
Sbjct: 1  MAKKMMAVFLMCIVVVAALQFATANED-EVTKYEAKFDAKYKSCYETCEKECLANGSGQS 60

Query: 61 YCEVKCDEDCGAKEAADKLHI 82
          +CEVKCDEDC  KE ADKLHI
Sbjct: 61 FCEVKCDEDCDEKEVADKLHI 80

The following BLAST results are available for this feature:

BLAST of CSPI06G08090 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
O24172	9.0e-08	47.62	Major pollen allergen Ole e 6 OS=Olea europaea OX=4146 GN=OLE6 PE=1 SV=1	[more]

BLAST of CSPI06G08090 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KDP7	6.6e-38	96.34	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G102490 PE=4 SV=1	[more]
A0A5A7T8P0	5.8e-34	93.83	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3CAJ3	5.8e-34	93.83	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 ...	[more]
A0A5D3BCS2	4.3e-29	81.48	Major pollen allergen Ole e 6-like OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A1S3C530	4.3e-29	81.48	major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103496750 PE=4 ...	[more]

BLAST of CSPI06G08090 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140522.1	1.4e-37	96.34	major pollen allergen Ole e 6 [Cucumis sativus] >KGN46487.1 hypothetical protein...	[more]
XP_008459802.1	1.2e-33	93.83	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0039792.1 major...	[more]
XP_008456958.1	8.9e-29	81.48	PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo] >KAA0066995.1 major...	[more]
XP_004146471.1	2.4e-26	79.01	major pollen allergen Ole e 6 [Cucumis sativus] >KGN50739.1 hypothetical protein...	[more]
XP_038891517.1	3.2e-26	77.78	major pollen allergen Ole e 6-like [Benincasa hispida]	[more]

BLAST of CSPI06G08090 vs. NCBI nr


Match Name	E-value	Identity	Description

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015333	Pollen allergen ole e 6	PFAM	PF09253	Ole_e_6	coord: 44..80 e-value: 9.5E-13 score: 47.9
IPR015333	Pollen allergen ole e 6	PANTHER	PTHR35632	MAJOR POLLEN ALLERGEN OLE E 6-LIKE	coord: 1..82
IPR036466	Pollen allergen ole e 6 superfamily	GENE3D	1.10.287.720	Pollen allergen ole e 6	coord: 38..82 e-value: 4.8E-16 score: 60.0
IPR036466	Pollen allergen ole e 6 superfamily	SUPERFAMILY	111388	Pollen allergen ole e 6	coord: 38..79
None	No IPR available	PANTHER	PTHR35632:SF5	SUBFAMILY NOT NAMED	coord: 1..82

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G08090.1	CSPI06G08090.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0051213	dioxygenase activity