CSPI06G07920 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G07920
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Pentatricopeptide repeat-containing protein
Location	Chr6: 6692105 .. 6693598 (+)
RNA-Seq Expression	CSPI06G07920
Synteny	CSPI06G07920

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAGTATTAGGTGGCCAAGGATTTTAACGCCCACATGTTTATCTCAGATTATTAGGAAGCAGAATAATCCCCAAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCAGTGTATGCCACAATGATCAAGATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTTTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTAGAAATCCTGTTGAAGGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGGAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAGTCGGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGCTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAACGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCCCGAAAGGGTGGTGGCGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGAAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCCCATTACCGAATCGACTTAGATCAATGCAGGAATAGCAACCTCACCATTGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGCCACATGATAGCTAAAGGCTTCAGGCCACCATCCTTGATCTATGAAGCGAAAGCAGCTTCATTATGCAAAGAAGGCAAAGTTGACGATGCAGTCAAAGTAATTGAAGAGCAAATAGTGGGAGGCTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCTCGAAAATCGATATATTGAAGCATGTAAGGTTTTAGAGGAGATGGTAATCAAATCGTTTTGCCCTTGCTCTAACACATTCAATACACTTATCAAAGGTCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTTTGTGTTGCGATGTGGCTGGCATCGATATGTGTTCCAGGGTTTTATGA

mRNA sequence

ATGAGTATTAGGTGGCCAAGGATTTTAACGCCCACATGTTTATCTCAGATTATTAGGAAGCAGAATAATCCCCAAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCAGTGTATGCCACAATGATCAAGATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTTTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTAGAAATCCTGTTGAAGGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGGAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAGTCGGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGCTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAACGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCCCGAAAGGGTGGTGGCGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGAAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCCCATTACCGAATCGACTTAGATCAATGCAGGAATAGCAACCTCACCATTGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGCCACATGATAGCTAAAGGCTTCAGGCCACCATCCTTGATCTATGAAGCGAAAGCAGCTTCATTATGCAAAGAAGGCAAAGTTGACGATGCAGTCAAAGTAATTGAAGAGCAAATAGTGGGAGGCTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCTCGAAAATCGATATATTGAAGCATGTAAGGTTTTAGAGGAGATGGTAATCAAATCGTTTTGCCCTTGCTCTAACACATTCAATACACTTATCAAAGGTCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTTTGTGTTGCGATGTGGCTGGCATCGATATGTGTTCCAGGGTTTTATGA

Coding sequence (CDS)

ATGAGTATTAGGTGGCCAAGGATTTTAACGCCCACATGTTTATCTCAGATTATTAGGAAGCAGAATAATCCCCAAACAGCTTACCAACTGTTTAAGGAAGCCAAATGTAGGTACCCAGATTATCGGCACAATGGTCCAGTGTATGCCACAATGATCAAGATACTCGGAAACTCGGGCAGAGTTTCCGAGATGAGAGAAGTGATGGATCAGATGAGAGATGACTCTTGTGAATGCAAAGATTCTGTATTTTCATTTGCAATTAAAACGTATGCTAGTCATGGATTATTGGAAGATGGTATATCTCTTTTTAAAAGTTTTGGGAGATTTAACTGTACCAATAGAACACAAACTTTCAATACCCTTTTAGAAATCCTGTTGAAGGAATCTCAGCTTCATGCTGCTTGTCAGCTTTTTCAGGAGTGTTCTTATGGTTGGGGAGTGAAATCCAGGACTCAGTCCTTGAATTTGTTGATGCAATCTCTCTGCCAAAGAGGTCAGTCGGAGCTTGCTTTACATGTCTTTCAAGAAATGGATTACCAAAGCTGCTATCCAAATAGACTGAGTTATTTGATTGTAATGAAAGGACTGTGTCAAGATGGTAGGCTTAACGAGGCCATCCATTTGTTGTATTCCATGTTTTGGAGAATTTCCCGAAAGGGTGGTGGCGGGGACATAGTAATTTATAGAACCCTTCTGTTTGCTTTGTGTGATAATGGAGAGATCGAGAAAGCTGTGGAAATACTTGGCAAGATCTTGAGGAAAGGACTAAAAGCCCCTAAACGGGCCCATTACCGAATCGACTTAGATCAATGCAGGAATAGCAACCTCACCATTGAGGAAATCAAGAGTTTAATCAATGAAGCTTTAATCAAAGGCGGAATTCCCAGTTCAGATAGCTATTGTGCCATGGCTGTTGATCTATATAACGAAAACAAGACTGATCAGGGAGATAAAGTGGTTAGCCACATGATAGCTAAAGGCTTCAGGCCACCATCCTTGATCTATGAAGCGAAAGCAGCTTCATTATGCAAAGAAGGCAAAGTTGACGATGCAGTCAAAGTAATTGAAGAGCAAATAGTGGGAGGCTGTGTTCCAACTATTGCATTGTACAACATCGTTCTGAAGGGTCTTTGTGATGATGGAAAATCAACAGTGGCTATGGAGTATTTGAAGAAAATGGCAAAGCAGGTCGGTCTTGTTGCCAACAAAGAAACTTACAGCACTTTAGTACATGGACTTTGTCTCGAAAATCGATATATTGAAGCATGTAAGGTTTTAGAGGAGATGGTAATCAAATCGTTTTGCCCTTGCTCTAACACATTCAATACACTTATCAAAGGTCTTTGCTCAGTTGGAAAACACTATGAAGCTGTGATGTGGTTGGAAGAAATGATTAGCCAAGGTCAATTGCCTCATGTTTGTGTCTGGAATTCTTTGGTTTCATCTTTGTGTTGCGATGTGGCTGGCATCGATATGTGTTCCAGGGTTTTATGA

Protein sequence

MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSLCCDVAGIDMCSRVL*

Homology

[Close]

BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot
Match: Q9SYK1 (Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX=3702 GN=At1g05600 PE=2 SV=1)

HSP 1 Score: 579.3 bits (1492), Expect = 4.1e-164
Identity = 278/497 (55.94%), Postives = 371/497 (74.65%), Query Frame = 0


Query: 3   IRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVS 62
           +RWPR+LTP+ LSQI++KQ NP TA +LF+EAK R+P Y HNG VYATMI ILG S RV 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLL 122
           EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKS   FNC N + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSC 182
           + ++KES+L AAC +F++  YGW V SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KG G DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 KAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCA 302
            A+EILGKILRKGLKAPKR ++ I+     +S+  IE +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVI-EEQIVG 362
           MA DL+ E K  +G++V+  M +KGF P   IY AK  +LC+ GK+ +AV VI +E + G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 GCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIE 422
            C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+KQV  VAN+ETY TLV GLC + +++E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVS 482
           A +V+EEM+IKS  P   T++ +IKGLC + + YEAVMWLEEM+SQ  +P   VW +L  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLC-CDVAGIDMCSRVL 498
           S+C C +  +++   ++
Sbjct: 484 SVCFCAIDVVEILEHLI 500

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BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot
Match: O49436 (Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX=3702 GN=EMB1025 PE=3 SV=1)

HSP 1 Score: 181.8 bits (460), Expect = 1.9e-44
Identity = 115/480 (23.96%), Postives = 225/480 (46.88%), Query Frame = 0


Query: 9   LTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVM 68
           ++P    +++        + ++FK A  +   ++      ++MI+   NSG    + +++
Sbjct: 42  VSPNPSMEVVENPLEAPISEKMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLL 101

Query: 69  DQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLF-KSFGRFNCTNRTQTFNTLLEILLK 128
            ++R ++    +  F    + Y    L +  + LF +    F C    ++FN++L +++ 
Sbjct: 102 SRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIIN 161

Query: 129 ESQLHAACQLFQ---ECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 188
           E   H   + +      +    +     S NL++++LC+    + A+ VF+ M  + C P
Sbjct: 162 EGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP 221

Query: 189 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEKA 248
           +  +Y  +M GLC++ R++EA+ LL  M      +G     VIY  L+  LC  G++ + 
Sbjct: 222 DGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRV 281

Query: 249 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 308
            +++  +  KG    +  +  +    C    L  ++  SL+   +    IP+  +Y  + 
Sbjct: 282 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLI 341

Query: 309 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCV 368
             L  + +     +++S M  +G+     IY    + L KEGK ++A+ +  +    GC 
Sbjct: 342 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 401

Query: 369 PTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACK 428
           P I +Y++++ GLC +GK   A E L +M    G + N  TYS+L+ G        EA +
Sbjct: 402 PNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQ 461

Query: 429 VLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSLC 485
           V +EM           ++ LI GLC VG+  EA+M   +M++ G  P    ++S++  LC
Sbjct: 462 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513

[Close]

BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot
Match: Q9LFF1 (Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=MEE40 PE=2 SV=1)

HSP 1 Score: 180.6 bits (457), Expect = 4.2e-44
Identity = 121/511 (23.68%), Postives = 235/511 (45.99%), Query Frame = 0


Query: 10  TPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVMD 69
           T   L   +R Q +   A +LF  A  + P++     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 70  QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SFGRFNCTNRTQTFNTLLEILLKE 129
            M+   CE   S F   I++YA   L ++ +S+       F     T  +N +L +L+  
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 130 SQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLC-------------------------- 189
           + L    ++       WG+K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 190 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMF 249
                    + G  + AL + ++M    C  + +S  +++ G C++GR+ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 250 WRISRKGGGGDIVIYRTLLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRN 309
              ++ G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C+ 
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348

Query: 310 SNLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSL 369
               ++E   ++++ + +   P++ +Y  +   L  EN+ ++  ++   + +KG  P   
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408

Query: 370 IYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKM 429
            + +    LC       A+++ EE    GC P    YN+++  LC  GK   A+  LK+M
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 468

Query: 430 AKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGK 485
            +  G   +  TY+TL+ G C  N+  EA ++ +EM +      S T+NTLI GLC   +
Sbjct: 469 -ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 528

[Close]

BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot
Match: Q9CA58 (Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis thaliana OX=3702 GN=At1g74580 PE=3 SV=1)

HSP 1 Score: 177.2 bits (448), Expect = 4.7e-43
Identity = 113/474 (23.84%), Postives = 223/474 (47.05%), Query Frame = 0


Query: 9   LTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVM 68
           L P  ++ +I+ Q +P  A ++F   + +   ++H    Y ++I+ LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 69  DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEILLK 128
             MR++      + V+  A+K Y   G +++ +++F+    ++C     ++N ++ +L+ 
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 129 ESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 188
                 A +++       G+     S  + M+S C+  +   AL +   M  Q C  N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 189 SYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEKAVEI 248
           +Y  V+ G  ++    E     Y +F ++   G    +  +  LL  LC  G++++  ++
Sbjct: 185 AYCTVVGGFYEENFKAEG----YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 244

Query: 249 LGKILRKGLKAPKRAHYRIDLD-QCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMAVD 308
           L K++++G+  P    Y + +   C+   L  +    ++   + +G  P   +Y  +   
Sbjct: 245 LDKVIKRGV-LPNLFTYNLFIQGLCQRGEL--DGAVRMVGCLIEQGPKPDVITYNNLIYG 304

Query: 309 LYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPT 368
           L   +K  + +  +  M+ +G  P S  Y    A  CK G V  A +++ + +  G VP 
Sbjct: 305 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 364

Query: 369 IALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVL 428
              Y  ++ GLC +G++  A+    + A   G+  N   Y+TL+ GL  +   +EA ++ 
Sbjct: 365 QFTYRSLIDGLCHEGETNRALALFNE-ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 424

Query: 429 EEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 481
            EM  K   P   TFN L+ GLC +G   +A   ++ MIS+G  P +  +N L+
Sbjct: 425 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

[Close]

BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot
Match: O81908 (Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=At1g02060 PE=2 SV=2)

HSP 1 Score: 162.9 bits (411), Expect = 9.1e-39
Identity = 118/463 (25.49%), Postives = 219/463 (47.30%), Query Frame = 0


Query: 41  YRHNGPVYATMIKILGNSGRVSEMREVM--DQMRDDSC-ECKDSVFSFAIKTYASHGLLE 100
           + H    +  M++ LG +  ++  R  +   + R + C + +D  F+  I++Y + GL +
Sbjct: 96  FSHKEQSFFLMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFNSLIRSYGNAGLFQ 155

Query: 101 DGISLFKSFGRFNCTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLL 160
           + + LF++  +   +    TFN+LL ILLK  +   A  LF E    +GV   + + N L
Sbjct: 156 ESVKLFQTMKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTL 215

Query: 161 MQSLCQRGQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRIS 220
           +   C+    + A  +F++M+   C P+ ++Y  ++ GLC+ G++  A ++L  M  + +
Sbjct: 216 INGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKAT 275

Query: 221 RKGGGGDIVIYRTLLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLT 280
                 ++V Y TL+   C   EI++AV +   +L +GLK P    Y   +     ++  
Sbjct: 276 --DVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLK-PNAVTYNTLIKGLSEAH-R 335

Query: 281 IEEIKSLINEALIKGGIPSSDSYCAMAVDLYNEN----------KTDQGDKVVSHMIAKG 340
            +EIK ++        I  +D++   A D    N            D   KV   M+   
Sbjct: 336 YDEIKDIL--------IGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMK 395

Query: 341 FRPPSLIYEAKAASLCKEGKVDDAV----KVIEEQIVGG---CVPTIALYNIVLKGLCDD 400
             P S  Y     +LC   + D A     ++ E++++ G   C P  A YN + + LC +
Sbjct: 396 LHPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCAN 455

Query: 401 GKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNT 460
           GK+  A +  +++ K+   V +  +Y TL+ G C E ++  A ++L  M+ + F P   T
Sbjct: 456 GKTKQAEKVFRQLMKRG--VQDPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLET 515

Query: 461 FNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSL 484
           +  LI GL  +G+   A   L+ M+    LP    ++S+++ L
Sbjct: 516 YELLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAEL 544

[Close]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL
Match: A0A0A0K9Q4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1)

HSP 1 Score: 1015.0 bits (2623), Expect = 1.1e-292
Identity = 495/497 (99.60%), Postives = 496/497 (99.80%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMI ILGNSGR
Sbjct: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360

Query: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
           GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI
Sbjct: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420

Query: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480
           EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV
Sbjct: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480

Query: 481 SSLCCDVAGIDMCSRVL 498
           SSLCCDVAGIDMCSRVL
Sbjct: 481 SSLCCDVAGIDMCSRVL 497

[Close]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL
Match: A0A1S4E2N8 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 1.8e-279
Identity = 475/497 (95.57%), Postives = 481/497 (96.78%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           M++RWPRILTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI ILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCTNRTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDDAVKVIEEQIV
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360

Query: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
           G CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLVHGLC ENRY 
Sbjct: 361 GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYT 420

Query: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480
           EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQLPHVCVWNSLV
Sbjct: 421 EACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLV 480

Query: 481 SSLCCDVAGIDMCSRVL 498
           SSLCCDVAGIDMCS+VL
Sbjct: 481 SSLCCDVAGIDMCSKVL 497

[Close]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL
Match: A0A5D3DM62 (Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002440 PE=4 SV=1)

HSP 1 Score: 971.1 bits (2509), Expect = 1.8e-279
Identity = 475/497 (95.57%), Postives = 481/497 (96.78%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           M++RWPRILTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI ILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCTNRTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDDAVKVIEEQIV
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360

Query: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
           G CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLVHGLC ENRY 
Sbjct: 361 GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYT 420

Query: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480
           EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQLPHVCVWNSLV
Sbjct: 421 EACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLV 480

Query: 481 SSLCCDVAGIDMCSRVL 498
           SSLCCDVAGIDMCS+VL
Sbjct: 481 SSLCCDVAGIDMCSKVL 497

[Close]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL
Match: A0A1S3CB38 (pentatricopeptide repeat-containing protein At1g05600 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498838 PE=4 SV=1)

HSP 1 Score: 873.6 bits (2256), Expect = 3.9e-250
Identity = 430/447 (96.20%), Postives = 434/447 (97.09%), Query Frame = 0


Query: 51  MIKILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 110
           MI ILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60

Query: 111 CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 170
           CTNRTQTFNTLLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 230
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180

Query: 231 LLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 290
           LLFALCDNGEIE+AVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240

Query: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 350
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300

Query: 351 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 410
           AVKVIEEQIVG CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360

Query: 411 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 470
           HGLC ENRY EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQL
Sbjct: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420

Query: 471 PHVCVWNSLVSSLCCDVAGIDMCSRVL 498
           PHVCVWNSLVSSLCCDVAGIDMCS+VL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 447

[Close]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL
Match: A0A6J1DVG7 (pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=3673 GN=LOC111024421 PE=4 SV=1)

HSP 1 Score: 864.4 bits (2232), Expect = 2.4e-247
Identity = 417/493 (84.58%), Postives = 458/493 (92.90%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           M++RWPR+LTPT LSQIIRKQNNP TA+QLFKEAKCRYP YRHNGPVYA MI ILGNSGR
Sbjct: 1   MTVRWPRMLTPTHLSQIIRKQNNPFTAFQLFKEAKCRYPGYRHNGPVYAAMIDILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           V EMREV+DQM+DDSCECKDSVFSFAIKTYASHGLLE+GISLFKS GRFNCTNRTQTFNT
Sbjct: 61  VVEMREVIDQMKDDSCECKDSVFSFAIKTYASHGLLEEGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILL ES+L AACQLFQ+ SYGWGVKSRTQSLNLLMQSLCQR QSELALH+FQEMDYQ
Sbjct: 121 LLEILLNESRLDAACQLFQQSSYGWGVKSRTQSLNLLMQSLCQRAQSELALHIFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
            CYPNRLSYLI+MKGLCQDGRLNEA+HLLYSMFWRIS++G GGDIVIYRTLL+ALC NGE
Sbjct: 181 GCYPNRLSYLILMKGLCQDGRLNEAVHLLYSMFWRISQRGSGGDIVIYRTLLYALCANGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           +E+AVEILGKILRKGLKAPKR HYRIDLDQC+NS LTI+EIK L NEALIKGGIPS  +Y
Sbjct: 241 VEQAVEILGKILRKGLKAPKRVHYRIDLDQCKNSKLTIDEIKRLFNEALIKGGIPSLATY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNEN TDQGDKVVSHM+AKGFRPPS IYEAKAA+LCKEGKVDDA++VI+E+ V
Sbjct: 301 CAMAVDLYNENVTDQGDKVVSHMLAKGFRPPSSIYEAKAAALCKEGKVDDAMRVIDEETV 360

Query: 361 -GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRY 420
            G C+P++ALYNIVLKGL ++GKSTVA+EYLKKMAKQVGLVA+KETYS LVHGLC ENRY
Sbjct: 361 KGSCIPSVALYNIVLKGLSNEGKSTVALEYLKKMAKQVGLVADKETYSILVHGLCAENRY 420

Query: 421 IEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSL 480
           IEACK+LEEMVIKS+ PCS+TFNTLI GLCS+GK YEAVMWLEEMISQGQLP + VWNSL
Sbjct: 421 IEACKMLEEMVIKSYRPCSDTFNTLIGGLCSIGKQYEAVMWLEEMISQGQLPELSVWNSL 480

Query: 481 VSSLCCDVAGIDM 493
           VSS+C +VAG D+
Sbjct: 481 VSSVCFNVAGTDV 493

[Close]

BLAST of CSPI06G07920 vs. NCBI nr
Match: XP_004140638.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativus] >KGN46470.1 hypothetical protein Csa_005325 [Cucumis sativus])

HSP 1 Score: 1015.0 bits (2623), Expect = 2.2e-292
Identity = 495/497 (99.60%), Postives = 496/497 (99.80%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMI ILGNSGR
Sbjct: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMINILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360

Query: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
           GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI
Sbjct: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420

Query: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480
           EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV
Sbjct: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480

Query: 481 SSLCCDVAGIDMCSRVL 498
           SSLCCDVAGIDMCSRVL
Sbjct: 481 SSLCCDVAGIDMCSRVL 497

[Close]

BLAST of CSPI06G07920 vs. NCBI nr
Match: XP_016902498.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >XP_016902499.1 PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis melo] >KAA0039806.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa] >TYK24691.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa])

HSP 1 Score: 971.1 bits (2509), Expect = 3.7e-279
Identity = 475/497 (95.57%), Postives = 481/497 (96.78%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           M++RWPRILTPT LSQIIRKQNNP TAYQLFKEAKCRYPDYRHNGPVYA MI ILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKCRYPDYRHNGPVYAAMINILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFNCTNRTQTFNT
Sbjct: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRTLLFALCDNGE
Sbjct: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRTLLFALCDNGE 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALIKGGIPSSDSY
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALIKGGIPSSDSY 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDDAVKVIEEQIV
Sbjct: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDDAVKVIEEQIV 360

Query: 361 GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYI 420
           G CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLVHGLC ENRY 
Sbjct: 361 GSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLVHGLCRENRYT 420

Query: 421 EACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 480
           EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQLPHVCVWNSLV
Sbjct: 421 EACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQLPHVCVWNSLV 480

Query: 481 SSLCCDVAGIDMCSRVL 498
           SSLCCDVAGIDMCS+VL
Sbjct: 481 SSLCCDVAGIDMCSKVL 497

[Close]

BLAST of CSPI06G07920 vs. NCBI nr
Match: XP_038874865.1 (pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida])

HSP 1 Score: 917.1 bits (2369), Expect = 6.3e-263
Identity = 450/497 (90.54%), Postives = 472/497 (94.97%), Query Frame = 0


Query: 1   MSIRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGR 60
           M++RWPRILTPT LSQIIRKQNNP TAYQLFKEAK RYPDYRHNGPVYA MI ILGNSGR
Sbjct: 1   MTVRWPRILTPTYLSQIIRKQNNPLTAYQLFKEAKRRYPDYRHNGPVYAAMIDILGNSGR 60

Query: 61  VSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNT 120
           VSEMREV+DQMRDDSCECKDSVFSFAIKTYASHGLLEDGI+LFKS G+FNCTNRTQTFNT
Sbjct: 61  VSEMREVIDQMRDDSCECKDSVFSFAIKTYASHGLLEDGITLFKSLGKFNCTNRTQTFNT 120

Query: 121 LLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180
           LLEILL ESQL AACQLFQE SYGW VKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ
Sbjct: 121 LLEILLNESQLDAACQLFQESSYGWAVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQ 180

Query: 181 SCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGE 240
           SCYP+RLSYLI+MKGLCQDGRLNEAIHLLYSMFWRIS++GGGGDIVIYRTLLFALCDNG+
Sbjct: 181 SCYPSRLSYLILMKGLCQDGRLNEAIHLLYSMFWRISQRGGGGDIVIYRTLLFALCDNGD 240

Query: 241 IEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSY 300
           IE+AVEILGKILRKGLKAPKRAHYRIDLDQCRNS LTI EIK LINEALIKGGIPSSDS+
Sbjct: 241 IEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSKLTIGEIKRLINEALIKGGIPSSDSF 300

Query: 301 CAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIV 360
           CAMAVDLYNEN+TDQGDKVVSHM+AKGFRPPS I+EAK A+LCKEGKVDDAVKVIEE+IV
Sbjct: 301 CAMAVDLYNENETDQGDKVVSHMVAKGFRPPSSIFEAKVAALCKEGKVDDAVKVIEEEIV 360

Query: 361 -GGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRY 420
            G CVPT+ALYNIVLKGLCD+GKSTVAMEYLKKMAKQVGLVA+K TYSTLVHGLC ENRY
Sbjct: 361 KGSCVPTVALYNIVLKGLCDEGKSTVAMEYLKKMAKQVGLVADKGTYSTLVHGLCRENRY 420

Query: 421 IEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSL 480
           IEACKVLEEMVIKSF PCSNTFNTLI+GLCSVGK YEAVMWLEEMISQGQLPHV VWNSL
Sbjct: 421 IEACKVLEEMVIKSFWPCSNTFNTLIRGLCSVGKQYEAVMWLEEMISQGQLPHVSVWNSL 480

Query: 481 VSSLCCDVAGIDMCSRV 497
           VSSLCCDVAG +M S V
Sbjct: 481 VSSLCCDVAGTNMWSEV 497

[Close]

BLAST of CSPI06G07920 vs. NCBI nr
Match: XP_011656819.1 (pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis sativus])

HSP 1 Score: 907.1 bits (2343), Expect = 6.5e-260
Identity = 445/447 (99.55%), Postives = 446/447 (99.78%), Query Frame = 0


Query: 51  MIKILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 110
           MI ILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 60

Query: 111 CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 170
           CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 230
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 180

Query: 231 LLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 290
           LLFALCDNGEIE+AVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 240

Query: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 350
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 300

Query: 351 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 410
           AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 360

Query: 411 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 470
           HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL
Sbjct: 361 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 420

Query: 471 PHVCVWNSLVSSLCCDVAGIDMCSRVL 498
           PHVCVWNSLVSSLCCDVAGIDMCSRVL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSRVL 447

[Close]

BLAST of CSPI06G07920 vs. NCBI nr
Match: XP_008459832.1 (PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis melo])

HSP 1 Score: 873.6 bits (2256), Expect = 8.0e-250
Identity = 430/447 (96.20%), Postives = 434/447 (97.09%), Query Frame = 0


Query: 51  MIKILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFN 110
           MI ILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKS GRFN
Sbjct: 1   MINILGNSGRVSEMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSLGRFN 60

Query: 111 CTNRTQTFNTLLEILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELA 170
           CTNRTQTFNTLLEILL ESQLHAACQLFQECSYGW VKSRTQSLNLLMQSLCQRGQSELA
Sbjct: 61  CTNRTQTFNTLLEILLNESQLHAACQLFQECSYGWEVKSRTQSLNLLMQSLCQRGQSELA 120

Query: 171 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRT 230
           LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKG GGDIVIYRT
Sbjct: 121 LHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGSGGDIVIYRT 180

Query: 231 LLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALI 290
           LLFALCDNGEIE+AVEILGKILRKGLKAPKRAHYRIDLDQCRN+ LTIEEIKSLINEALI
Sbjct: 181 LLFALCDNGEIEQAVEILGKILRKGLKAPKRAHYRIDLDQCRNNKLTIEEIKSLINEALI 240

Query: 291 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDD 350
           KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPS IYEAK ASLCKEGKVDD
Sbjct: 241 KGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSSIYEAKVASLCKEGKVDD 300

Query: 351 AVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLV 410
           AVKVIEEQIVG CVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAK+VGLVANKETYSTLV
Sbjct: 301 AVKVIEEQIVGSCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKKVGLVANKETYSTLV 360

Query: 411 HGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQL 470
           HGLC ENRY EACKVLEEMVIKSF PCSNTFNTLIKGLCSVGK YEAVMWLEEMISQGQL
Sbjct: 361 HGLCRENRYTEACKVLEEMVIKSFWPCSNTFNTLIKGLCSVGKQYEAVMWLEEMISQGQL 420

Query: 471 PHVCVWNSLVSSLCCDVAGIDMCSRVL 498
           PHVCVWNSLVSSLCCDVAGIDMCS+VL
Sbjct: 421 PHVCVWNSLVSSLCCDVAGIDMCSKVL 447

[Close]

BLAST of CSPI06G07920 vs. TAIR 10
Match: AT1G05600.1 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 579.3 bits (1492), Expect = 2.9e-165
Identity = 278/497 (55.94%), Postives = 371/497 (74.65%), Query Frame = 0


Query: 3   IRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVS 62
           +RWPR+LTP+ LSQI++KQ NP TA +LF+EAK R+P Y HNG VYATMI ILG S RV 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLL 122
           EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKS   FNC N + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSC 182
           + ++KES+L AAC +F++  YGW V SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KG G DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 KAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCA 302
            A+EILGKILRKGLKAPKR ++ I+     +S+  IE +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVI-EEQIVG 362
           MA DL+ E K  +G++V+  M +KGF P   IY AK  +LC+ GK+ +AV VI +E + G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 GCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIE 422
            C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+KQV  VAN+ETY TLV GLC + +++E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVS 482
           A +V+EEM+IKS  P   T++ +IKGLC + + YEAVMWLEEM+SQ  +P   VW +L  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLC-CDVAGIDMCSRVL 498
           S+C C +  +++   ++
Sbjct: 484 SVCFCAIDVVEILEHLI 500

[Close]

BLAST of CSPI06G07920 vs. TAIR 10
Match: AT1G05600.2 (Tetratricopeptide repeat (TPR)-like superfamily protein )

HSP 1 Score: 579.3 bits (1492), Expect = 2.9e-165
Identity = 278/497 (55.94%), Postives = 371/497 (74.65%), Query Frame = 0


Query: 3   IRWPRILTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVS 62
           +RWPR+LTP+ LSQI++KQ NP TA +LF+EAK R+P Y HNG VYATMI ILG S RV 
Sbjct: 4   VRWPRVLTPSLLSQILKKQKNPVTALKLFEEAKERFPSYGHNGSVYATMIDILGKSNRVL 63

Query: 63  EMREVMDQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLL 122
           EM+ V+++M++DSCECKDSVF+  I+T++  G LED ISLFKS   FNC N + +F+TLL
Sbjct: 64  EMKYVIERMKEDSCECKDSVFASVIRTFSRAGRLEDAISLFKSLHEFNCVNWSLSFDTLL 123

Query: 123 EILLKESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSC 182
           + ++KES+L AAC +F++  YGW V SR  +LNLLM+ LCQ  +S+LA  VFQEM+YQ C
Sbjct: 124 QEMVKESELEAACHIFRKYCYGWEVNSRITALNLLMKVLCQVNRSDLASQVFQEMNYQGC 183

Query: 183 YPNRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIE 242
           YP+R SY I+MKG C +G+L EA HLLYSMFWRIS+KG G DIV+YR LL ALCD GE++
Sbjct: 184 YPDRDSYRILMKGFCLEGKLEEATHLLYSMFWRISQKGSGEDIVVYRILLDALCDAGEVD 243

Query: 243 KAVEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCA 302
            A+EILGKILRKGLKAPKR ++ I+     +S+  IE +K L+ E LI+G IP  DSY A
Sbjct: 244 DAIEILGKILRKGLKAPKRCYHHIEAGHWESSSEGIERVKRLLTETLIRGAIPCLDSYSA 303

Query: 303 MAVDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVI-EEQIVG 362
           MA DL+ E K  +G++V+  M +KGF P   IY AK  +LC+ GK+ +AV VI +E + G
Sbjct: 304 MATDLFEEGKLVEGEEVLLAMRSKGFEPTPFIYGAKVKALCRAGKLKEAVSVINKEMMQG 363

Query: 363 GCVPTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIE 422
            C+PT+ +YN+++KGLCDDGKS  A+ YLKKM+KQV  VAN+ETY TLV GLC + +++E
Sbjct: 364 HCLPTVGVYNVLIKGLCDDGKSMEAVGYLKKMSKQVSCVANEETYQTLVDGLCRDGQFLE 423

Query: 423 ACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVS 482
           A +V+EEM+IKS  P   T++ +IKGLC + + YEAVMWLEEM+SQ  +P   VW +L  
Sbjct: 424 ASQVMEEMLIKSHFPGVETYHMMIKGLCDMDRRYEAVMWLEEMVSQDMVPESSVWKALAE 483

Query: 483 SLC-CDVAGIDMCSRVL 498
           S+C C +  +++   ++
Sbjct: 484 SVCFCAIDVVEILEHLI 500

[Close]

BLAST of CSPI06G07920 vs. TAIR 10
Match: AT4G20090.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 181.8 bits (460), Expect = 1.4e-45
Identity = 115/480 (23.96%), Postives = 225/480 (46.88%), Query Frame = 0


Query: 9   LTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVM 68
           ++P    +++        + ++FK A  +   ++      ++MI+   NSG    + +++
Sbjct: 42  VSPNPSMEVVENPLEAPISEKMFKSAP-KMGSFKLGDSTLSSMIESYANSGDFDSVEKLL 101

Query: 69  DQMRDDSCECKDSVFSFAIKTYASHGLLEDGISLF-KSFGRFNCTNRTQTFNTLLEILLK 128
            ++R ++    +  F    + Y    L +  + LF +    F C    ++FN++L +++ 
Sbjct: 102 SRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRMVDEFRCKRSVKSFNSVLNVIIN 161

Query: 129 ESQLHAACQLFQ---ECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYP 188
           E   H   + +      +    +     S NL++++LC+    + A+ VF+ M  + C P
Sbjct: 162 EGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEVFRGMPERKCLP 221

Query: 189 NRLSYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEKA 248
           +  +Y  +M GLC++ R++EA+ LL  M      +G     VIY  L+  LC  G++ + 
Sbjct: 222 DGYTYCTLMDGLCKEERIDEAVLLLDEM----QSEGCSPSPVIYNVLIDGLCKKGDLTRV 281

Query: 249 VEILGKILRKGLKAPKRAHYRIDLDQCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMA 308
            +++  +  KG    +  +  +    C    L  ++  SL+   +    IP+  +Y  + 
Sbjct: 282 TKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL--DKAVSLLERMVSSKCIPNDVTYGTLI 341

Query: 309 VDLYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCV 368
             L  + +     +++S M  +G+     IY    + L KEGK ++A+ +  +    GC 
Sbjct: 342 NGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMAEKGCK 401

Query: 369 PTIALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACK 428
           P I +Y++++ GLC +GK   A E L +M    G + N  TYS+L+ G        EA +
Sbjct: 402 PNIVVYSVLVDGLCREGKPNEAKEILNRMIAS-GCLPNAYTYSSLMKGFFKTGLCEEAVQ 461

Query: 429 VLEEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLVSSLC 485
           V +EM           ++ LI GLC VG+  EA+M   +M++ G  P    ++S++  LC
Sbjct: 462 VWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSIIKGLC 513

[Close]

BLAST of CSPI06G07920 vs. TAIR 10
Match: AT3G53700.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 180.6 bits (457), Expect = 3.0e-45
Identity = 121/511 (23.68%), Postives = 235/511 (45.99%), Query Frame = 0


Query: 10  TPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVMD 69
           T   L   +R Q +   A +LF  A  + P++     +Y  ++  LG SG   +M+++++
Sbjct: 49  TDVKLLDSLRSQPDDSAALRLFNLAS-KKPNFSPEPALYEEILLRLGRSGSFDDMKKILE 108

Query: 70  QMRDDSCECKDSVFSFAIKTYASHGLLEDGISLFK-SFGRFNCTNRTQTFNTLLEILLKE 129
            M+   CE   S F   I++YA   L ++ +S+       F     T  +N +L +L+  
Sbjct: 109 DMKSSRCEMGTSTFLILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDG 168

Query: 130 SQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLC-------------------------- 189
           + L    ++       WG+K    + N+L+++LC                          
Sbjct: 169 NSLKLV-EISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKT 228

Query: 190 ---------QRGQSELALHVFQEMDYQSCYPNRLSYLIVMKGLCQDGRLNEAIHLLYSMF 249
                    + G  + AL + ++M    C  + +S  +++ G C++GR+ +A++ +  M 
Sbjct: 229 FTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEM- 288

Query: 250 WRISRKGGGGDIVIYRTLLFALCDNGEIEKAVEILGKILRKGLKAPKRAHYRIDLDQCRN 309
              ++ G   D   + TL+  LC  G ++ A+EI+  +L++G       +  +    C+ 
Sbjct: 289 --SNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKL 348

Query: 310 SNLTIEEIKSLINEALIKGGIPSSDSYCAMAVDLYNENKTDQGDKVVSHMIAKGFRPPSL 369
               ++E   ++++ + +   P++ +Y  +   L  EN+ ++  ++   + +KG  P   
Sbjct: 349 GE--VKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVC 408

Query: 370 IYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPTIALYNIVLKGLCDDGKSTVAMEYLKKM 429
            + +    LC       A+++ EE    GC P    YN+++  LC  GK   A+  LK+M
Sbjct: 409 TFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQM 468

Query: 430 AKQVGLVANKETYSTLVHGLCLENRYIEACKVLEEMVIKSFCPCSNTFNTLIKGLCSVGK 485
            +  G   +  TY+TL+ G C  N+  EA ++ +EM +      S T+NTLI GLC   +
Sbjct: 469 -ELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRR 528

[Close]

BLAST of CSPI06G07920 vs. TAIR 10
Match: AT1G74580.1 (Pentatricopeptide repeat (PPR) superfamily protein )

HSP 1 Score: 177.2 bits (448), Expect = 3.3e-44
Identity = 113/474 (23.84%), Postives = 223/474 (47.05%), Query Frame = 0


Query: 9   LTPTCLSQIIRKQNNPQTAYQLFKEAKCRYPDYRHNGPVYATMIKILGNSGRVSEMREVM 68
           L P  ++ +I+ Q +P  A ++F   + +   ++H    Y ++I+ LG  G+   M EV+
Sbjct: 5   LLPKHVTAVIKCQKDPMKALEMFNSMR-KEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVL 64

Query: 69  DQMRDD-SCECKDSVFSFAIKTYASHGLLEDGISLFKSFGRFNCTNRTQTFNTLLEILLK 128
             MR++      + V+  A+K Y   G +++ +++F+    ++C     ++N ++ +L+ 
Sbjct: 65  VDMRENVGNHMLEGVYVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVD 124

Query: 129 ESQLHAACQLFQECSYGWGVKSRTQSLNLLMQSLCQRGQSELALHVFQEMDYQSCYPNRL 188
                 A +++       G+     S  + M+S C+  +   AL +   M  Q C  N +
Sbjct: 125 SGYFDQAHKVYMRMR-DRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVV 184

Query: 189 SYLIVMKGLCQDGRLNEAIHLLYSMFWRISRKGGGGDIVIYRTLLFALCDNGEIEKAVEI 248
           +Y  V+ G  ++    E     Y +F ++   G    +  +  LL  LC  G++++  ++
Sbjct: 185 AYCTVVGGFYEENFKAEG----YELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKL 244

Query: 249 LGKILRKGLKAPKRAHYRIDLD-QCRNSNLTIEEIKSLINEALIKGGIPSSDSYCAMAVD 308
           L K++++G+  P    Y + +   C+   L  +    ++   + +G  P   +Y  +   
Sbjct: 245 LDKVIKRGV-LPNLFTYNLFIQGLCQRGEL--DGAVRMVGCLIEQGPKPDVITYNNLIYG 304

Query: 309 LYNENKTDQGDKVVSHMIAKGFRPPSLIYEAKAASLCKEGKVDDAVKVIEEQIVGGCVPT 368
           L   +K  + +  +  M+ +G  P S  Y    A  CK G V  A +++ + +  G VP 
Sbjct: 305 LCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPD 364

Query: 369 IALYNIVLKGLCDDGKSTVAMEYLKKMAKQVGLVANKETYSTLVHGLCLENRYIEACKVL 428
              Y  ++ GLC +G++  A+    + A   G+  N   Y+TL+ GL  +   +EA ++ 
Sbjct: 365 QFTYRSLIDGLCHEGETNRALALFNE-ALGKGIKPNVILYNTLIKGLSNQGMILEAAQLA 424

Query: 429 EEMVIKSFCPCSNTFNTLIKGLCSVGKHYEAVMWLEEMISQGQLPHVCVWNSLV 481
            EM  K   P   TFN L+ GLC +G   +A   ++ MIS+G  P +  +N L+
Sbjct: 425 NEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILI 468

The following BLAST results are available for this feature:

BLAST of CSPI06G07920 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SYK1	4.1e-164	55.94	Pentatricopeptide repeat-containing protein At1g05600 OS=Arabidopsis thaliana OX...	[more]
O49436	1.9e-44	23.96	Pentatricopeptide repeat-containing protein At4g20090 OS=Arabidopsis thaliana OX...	[more]
Q9LFF1	4.2e-44	23.68	Pentatricopeptide repeat-containing protein At3g53700, chloroplastic OS=Arabidop...	[more]
Q9CA58	4.7e-43	23.84	Putative pentatricopeptide repeat-containing protein At1g74580 OS=Arabidopsis th...	[more]
O81908	9.1e-39	25.49	Pentatricopeptide repeat-containing protein At1g02060, chloroplastic OS=Arabidop...	[more]

BLAST of CSPI06G07920 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0K9Q4	1.1e-292	99.60	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095860 PE=4 SV=1	[more]
A0A1S4E2N8	1.8e-279	95.57	pentatricopeptide repeat-containing protein At1g05600 isoform X1 OS=Cucumis melo...	[more]
A0A5D3DM62	1.8e-279	95.57	Pentatricopeptide repeat-containing protein OS=Cucumis melo var. makuwa OX=11946...	[more]
A0A1S3CB38	3.9e-250	96.20	pentatricopeptide repeat-containing protein At1g05600 isoform X2 OS=Cucumis melo...	[more]
A0A6J1DVG7	2.4e-247	84.58	pentatricopeptide repeat-containing protein At1g05600 OS=Momordica charantia OX=...	[more]

BLAST of CSPI06G07920 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004140638.1	2.2e-292	99.60	pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cucumis sativu...	[more]
XP_016902498.1	3.7e-279	95.57	PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X1 [Cuc...	[more]
XP_038874865.1	6.3e-263	90.54	pentatricopeptide repeat-containing protein At1g05600 [Benincasa hispida]	[more]
XP_011656819.1	6.5e-260	99.55	pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cucumis sativu...	[more]
XP_008459832.1	8.0e-250	96.20	PREDICTED: pentatricopeptide repeat-containing protein At1g05600 isoform X2 [Cuc...	[more]

BLAST of CSPI06G07920 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G05600.1	2.9e-165	55.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT1G05600.2	2.9e-165	55.94	Tetratricopeptide repeat (TPR)-like superfamily protein	[more]
AT4G20090.1	1.4e-45	23.96	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT3G53700.1	3.0e-45	23.68	Pentatricopeptide repeat (PPR) superfamily protein	[more]
AT1G74580.1	3.3e-44	23.84	Pentatricopeptide repeat (PPR) superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002885	Pentatricopeptide repeat	PFAM	PF13041	PPR_2	coord: 436..484 e-value: 4.2E-7 score: 30.1 coord: 153..198 e-value: 4.5E-10 score: 39.6 coord: 365..414 e-value: 3.7E-9 score: 36.7
IPR002885	Pentatricopeptide repeat	TIGRFAM	TIGR00756	TIGR00756	coord: 440..471 e-value: 2.7E-6 score: 25.2 coord: 405..436 e-value: 5.3E-6 score: 24.3 coord: 341..366 e-value: 0.0017 score: 16.4 coord: 369..402 e-value: 7.9E-4 score: 17.4 coord: 226..257 e-value: 4.2E-4 score: 18.3 coord: 188..212 e-value: 0.0024 score: 15.9 coord: 47..78 e-value: 4.9E-6 score: 24.4 coord: 154..185 e-value: 5.5E-5 score: 21.1
IPR002885	Pentatricopeptide repeat	PFAM	PF01535	PPR	coord: 341..357 e-value: 1.4 score: 9.3 coord: 48..76 e-value: 0.0074 score: 16.5 coord: 226..256 e-value: 6.2E-4 score: 19.8
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 402..436 score: 10.676364
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 150..184 score: 9.525427
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 44..78 score: 9.196589
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 224..258 score: 10.566751
IPR002885	Pentatricopeptide repeat	PROSITE	PS51375	PPR	coord: 437..471 score: 10.55579
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 142..272 e-value: 7.9E-19 score: 70.2
IPR011990	Tetratricopeptide-like helical domain superfamily	GENE3D	1.25.40.10	Tetratricopeptide repeat domain	coord: 273..382 e-value: 3.0E-11 score: 45.0 coord: 10..132 e-value: 6.1E-18 score: 66.8 coord: 383..488 e-value: 1.2E-22 score: 82.1
None	No IPR available	PANTHER	PTHR47932	ATPASE EXPRESSION PROTEIN 3	coord: 1..496
None	No IPR available	PANTHER	PTHR47932:SF36	PPR CONTAINING PLANT-LIKE PROTEIN	coord: 1..496

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G07920.1	CSPI06G07920.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0005515	protein binding