CSPI06G07850 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G07850
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	Protein of unknown function (DUF 3339)
Location	Chr6: 6627933 .. 6628265 (-)
RNA-Seq Expression	CSPI06G07850
Synteny	CSPI06G07850

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCAGATTGGGGGCCTATCTTTGTAGCTGTGATTCTCTTTGTTTTGTTAACTCCAGGGCTGCTCTTTCAGCTCCCGGGCAATCGCCGGTGCTTAGAGTTTGGCAACTTTCACACCAGTGCTGCTGCTATTATCGTCCATTCGATTCTCTACTTTGGTCTCATTTGTGTCTTCTTACTTGCCATCAAGGTTCATCTCTATATTGGTTCCTAACTCTTCACCAATGCATAGACTCGAACCATCCACGTTCGCCTCAATGCAACGTTTCTTGTTTGGTTTCTAATTCTCTAGTGTGATGTTTGTTTGACTCGACTTAGTTCGGGCTGTTCTTAA

mRNA sequence

ATGGCAGATTGGGGGCCTATCTTTGTAGCTGTGATTCTCTTTGTTTTGTTAACTCCAGGGCTGCTCTTTCAGCTCCCGGGCAATCGCCGGTGCTTAGAGTTTGGCAACTTTCACACCAGTGCTGCTGCTATTATCGTCCATTCGATTCTCTACTTTGGTCTCATTTGTGTCTTCTTACTTGCCATCAAGTGTGATGTTTGTTTGACTCGACTTAGTTCGGGCTGTTCTTAA

Coding sequence (CDS)

ATGGCAGATTGGGGGCCTATCTTTGTAGCTGTGATTCTCTTTGTTTTGTTAACTCCAGGGCTGCTCTTTCAGCTCCCGGGCAATCGCCGGTGCTTAGAGTTTGGCAACTTTCACACCAGTGCTGCTGCTATTATCGTCCATTCGATTCTCTACTTTGGTCTCATTTGTGTCTTCTTACTTGCCATCAAGTGTGATGTTTGTTTGACTCGACTTAGTTCGGGCTGTTCTTAA

Protein sequence

MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLLAIKCDVCLTRLSSGCS*

Homology

[Close]

BLAST of CSPI06G07850 vs. ExPASy TrEMBL
Match: A0A0A0KAG8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1)

HSP 1 Score: 128.3 bits (321), Expect = 1.4e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. ExPASy TrEMBL
Match: A0A6J1JSS9 (uncharacterized protein LOC111488037 isoform X2 OS=Cucurbita maxima OX=3661 GN=LOC111488037 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. ExPASy TrEMBL
Match: A0A6J1JUR0 (uncharacterized protein LOC111488037 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111488037 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. ExPASy TrEMBL
Match: A0A6J1GNZ8 (uncharacterized protein LOC111455815 OS=Cucurbita moschata OX=3662 GN=LOC111455815 PE=4 SV=1)

HSP 1 Score: 127.5 bits (319), Expect = 2.4e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. ExPASy TrEMBL
Match: A0A1S3CBL1 (uncharacterized protein LOC103498846 OS=Cucumis melo OX=3656 GN=LOC103498846 PE=4 SV=1)

HSP 1 Score: 127.1 bits (318), Expect = 3.2e-26
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+IIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. NCBI nr
Match: XP_011656810.1 (uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hypothetical protein Csa_005508 [Cucumis sativus])

HSP 1 Score: 128.3 bits (321), Expect = 2.9e-26
Identity = 63/63 (100.00%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. NCBI nr
Match: XP_022953200.1 (uncharacterized protein LOC111455815 [Cucurbita moschata])

HSP 1 Score: 127.5 bits (319), Expect = 5.0e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. NCBI nr
Match: XP_022991384.1 (uncharacterized protein LOC111488037 isoform X1 [Cucurbita maxima])

HSP 1 Score: 127.5 bits (319), Expect = 5.0e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. NCBI nr
Match: XP_022991385.1 (uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785.1 uncharacterized protein LOC111778992 [Cucurbita pepo subsp. pepo] >KAG7014656.1 hypothetical protein SDJN02_24835, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 127.5 bits (319), Expect = 5.0e-26
Identity = 61/63 (96.83%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+FVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHS+LYFGLICVFLL
Sbjct: 1  MADWGPVFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSVLYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. NCBI nr
Match: XP_008459846.1 (PREDICTED: uncharacterized protein LOC103498846 [Cucumis melo])

HSP 1 Score: 127.1 bits (318), Expect = 6.6e-26
Identity = 62/63 (98.41%), Postives = 63/63 (100.00%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAA+IIVHSILYFGLICVFLL
Sbjct: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAASIIVHSILYFGLICVFLL 60

Query: 61 AIK 64
          AIK
Sbjct: 61 AIK 63

[Close]

BLAST of CSPI06G07850 vs. TAIR 10
Match: AT5G08391.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 101.7 bits (252), Expect = 2.7e-22
Identity = 45/66 (68.18%), Postives = 57/66 (86.36%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          M+DWGP+ V VILFV+LTPGLLFQLPG ++ +EFGNF TSA ++IVHS+LYF L+CVFLL
Sbjct: 1  MSDWGPVLVTVILFVMLTPGLLFQLPGRQKYVEFGNFQTSAVSVIVHSLLYFSLVCVFLL 60

Query: 61 AIKCDV 67
          A+K  +
Sbjct: 61 ALKIHI 66

[Close]

BLAST of CSPI06G07850 vs. TAIR 10
Match: AT3G27030.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF3339 (InterPro:IPR021775); BEST Arabidopsis thaliana protein match is: Protein of unknown function (DUF 3339) (TAIR:AT5G40970.1); Has 538 Blast hits to 271 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 534; Viruses - 4; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 92.4 bits (228), Expect = 1.7e-19
Identity = 40/67 (59.70%), Postives = 53/67 (79.10%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          M DWGP+FVAV LFVLLTPGLL Q+PG  R +EFG F TS  ++IVH+++YF L+C+ LL
Sbjct: 1  MPDWGPVFVAVTLFVLLTPGLLIQVPGRGRVVEFGTFQTSGLSVIVHTLIYFTLVCILLL 60

Query: 61 AIKCDVC 68
          A++  +C
Sbjct: 61 ALQIHIC 67

[Close]

BLAST of CSPI06G07850 vs. TAIR 10
Match: AT3G48660.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 92.0 bits (227), Expect = 2.2e-19
Identity = 42/66 (63.64%), Postives = 54/66 (81.82%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+ VAVILFVLLTPGLLFQ+P   R +EFGN  TS A+I+VH+I++FGLI +F +
Sbjct: 1  MADWGPVVVAVILFVLLTPGLLFQIPARGRVVEFGNMQTSGASILVHTIIFFGLITIFTI 60

Query: 61 AIKCDV 67
          AI+  +
Sbjct: 61 AIRLHI 66

[Close]

BLAST of CSPI06G07850 vs. TAIR 10
Match: AT5G63500.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 88.6 bits (218), Expect = 2.4e-18
Identity = 39/66 (59.09%), Postives = 53/66 (80.30%), Query Frame = 0


Query: 1  MADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLL 60
          MADWGP+ +AVILFV+L+PGLLFQ+P   R +EFGN  TS A+I+VH+I++FGLI +F +
Sbjct: 1  MADWGPVLIAVILFVVLSPGLLFQIPAGGRVVEFGNMQTSGASILVHAIIFFGLITIFTI 60

Query: 61 AIKCDV 67
          AI   +
Sbjct: 61 AINVHI 66

[Close]

BLAST of CSPI06G07850 vs. TAIR 10
Match: AT3G01940.1 (Protein of unknown function (DUF 3339) )

HSP 1 Score: 81.6 bits (200), Expect = 2.9e-16
Identity = 37/65 (56.92%), Postives = 51/65 (78.46%), Query Frame = 0


Query: 2  ADWGPIFVAVILFVLLTPGLLFQLPGNRRCLEFGNFHTSAAAIIVHSILYFGLICVFLLA 61
          ADWGP+ VAV+LFV+L+PGLLFQLP  RR LE GN  TS  +I+VH+IL+F +I + ++A
Sbjct: 4  ADWGPVAVAVVLFVVLSPGLLFQLPARRRVLECGNMTTSGISILVHAILFFAIITILVIA 63

Query: 62 IKCDV 67
          I+  +
Sbjct: 64 IQIHI 68

The following BLAST results are available for this feature:

BLAST of CSPI06G07850 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G07850 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KAG8	1.4e-26	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095300 PE=4 SV=1	[more]
A0A6J1JSS9	2.4e-26	96.83	uncharacterized protein LOC111488037 isoform X2 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1JUR0	2.4e-26	96.83	uncharacterized protein LOC111488037 isoform X1 OS=Cucurbita maxima OX=3661 GN=L...	[more]
A0A6J1GNZ8	2.4e-26	96.83	uncharacterized protein LOC111455815 OS=Cucurbita moschata OX=3662 GN=LOC1114558...	[more]
A0A1S3CBL1	3.2e-26	98.41	uncharacterized protein LOC103498846 OS=Cucumis melo OX=3656 GN=LOC103498846 PE=...	[more]

BLAST of CSPI06G07850 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656810.1	2.9e-26	100.00	uncharacterized protein LOC101208994 [Cucumis sativus] >KGN46463.1 hypothetical ...	[more]
XP_022953200.1	5.0e-26	96.83	uncharacterized protein LOC111455815 [Cucurbita moschata]	[more]
XP_022991384.1	5.0e-26	96.83	uncharacterized protein LOC111488037 isoform X1 [Cucurbita maxima]	[more]
XP_022991385.1	5.0e-26	96.83	uncharacterized protein LOC111488037 isoform X2 [Cucurbita maxima] >XP_023514785...	[more]
XP_008459846.1	6.6e-26	98.41	PREDICTED: uncharacterized protein LOC103498846 [Cucumis melo]	[more]

BLAST of CSPI06G07850 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G08391.1	2.7e-22	68.18	Protein of unknown function (DUF 3339)	[more]
AT3G27030.1	1.7e-19	59.70	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT3G48660.1	2.2e-19	63.64	Protein of unknown function (DUF 3339)	[more]
AT5G63500.1	2.4e-18	59.09	Protein of unknown function (DUF 3339)	[more]
AT3G01940.1	2.9e-16	56.92	Protein of unknown function (DUF 3339)	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR021775	Protein of unknown function DUF3339	PFAM	PF11820	DUF3339	coord: 1..65 e-value: 5.0E-32 score: 109.9
IPR021775	Protein of unknown function DUF3339	PANTHER	PTHR33128	OS05G0103400 PROTEIN	coord: 1..66
None	No IPR available	PANTHER	PTHR33128:SF55	PROTEIN, PUTATIVE (DUF 3339)-RELATED	coord: 1..66

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G07850.1	CSPI06G07850.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane