CSPI06G07830 (gene) Cucumber (PI 183967) v1

Overview


Name	CSPI06G07830
Type	gene
Organism	Cucumis sativus var. hardwickii cv. PI 183967 (Cucumber (PI 183967) v1)
Description	MADS-box transcription factor 8-like
Location	Chr6: 6617894 .. 6621094 (+)
RNA-Seq Expression	CSPI06G07830
Synteny	CSPI06G07830

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATAAGCTTTTATTTTAATTCTACAAAGTAGCCTTTTCAATACTACCTAGGGCATGTGCACACAATTTGTAGTTCATGCGCTCAACTTTAAACGACTTGAATTGTTCTTTTATTCTTCCAAGTGCTTTAATGAATGTACGCCCTCACTTTCTAGTGCTCTTTCATGATTGTGATGCAGCTTACTGAATATTATTATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAACGACCTTCAAGGGACAAGTGAAAGTCTAATTGATAATGACGCAAAGGTGAGTGAGGATTTACAATATCTAGTGAAGGGAATACACTTTTAAATATTACATTACTAAAAGTATTTTTATAAATGTACAAAAGAGAGATTTTAAAACGGTGTTTCATTACAATTTTGAAGAAATTTTAGAAACTACTTTTATCATATAAAAAATACTTTAAAAATTGAAAGCAAGTGCTTCATTTTAAAACACAAGCACACAAGACAAATACTAAAAAAGTCAGTTAGAAGTGGTAATGAAGTTTACAATATTCGATTTTTCTTTCCCCCGGTTGAATATTGTGGCTTTCATTACCAAGGGGGAAAATCTTGCATCTCCTTTTTCTTTCAAATATAATCTTGCATCTTCTTTCTGCAGGACCATGTATCTGATGAGACAATCTTGGTTTCACTCAAAAAGCTCCTACAAACTATTCAAAGGCATCTATATTTTAACTAGTCTTTTTTTATGTAATATAATTGGTCAAAGTTTGACGGACATGTTCTCATTTCCAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATATAACTCAGATGGTGCAATTGGAGAATCAACTTGAAAGCACACTTGACAAAATCAAATCTCAAAGAGTGAGTTTATTTATTTGCACTGCATATTCATCTAAGAGGTTTCAACTTAACCTTTAATCACTTCAAATGATTTCTAAGTCCCTAGATATACCATCATGTTTTTCTTATATGCTGTCCTATACCTCATATTCAAACTCCCCAGTGGTACCCTGACTGCAAAAGTTATATGGCGGTTCCCCTTTAAAAGGTGTGCTTTGGATCAATTTATACAAATGTAGACTTTTTCACGAGTAATCTAACTAACGAGTTGAACGCACTTTTAGGGCATGTGAAAGCCTATTTTGGGATATGTTAAACTTTGTAGATATGTTAGGCTCTTTCATGCTCATTGAATGACGTACAAGGTTCAGAAGTAATTTAACTAGACCATTATGATCTGATGCACTAAAGCGCACTCTAAATTACACTGAAACAATGACGATCGCAGCTATTAGTACTAGGTAATCTTCTCCCTCTTTCAATGGACCTTGTCACATAATTAAAAGAGTGAGGCATCTGACAAGTCGCCCACCAAATAGAGTTGCAGCTCACGAGCACCACTCATTTAGTATTCCATTGTCCTCAGTTAACGCTGGCTAAGGGATCTAATTTTAGGCCTAACTTGTAACTAGGTGACTTACATTATGCAGAGACGTGCTTATATCTCTATGCTGTCAGGTCACTACCATTGGTACTATCTCCAATTGGGGGGAGGGGGAGAATCATTAAGAAACAATCAAGCAAGGTGAAGTTCTGGGAGATGTAAATAGGAATGTGAAGTAAATAAGGTTTTAATAAAGAGAGAAAGAGAGAGACTCAAGATCGCTGCTCTTTCCCCTACTCTAATCTTTGTGTTCAATCCATTCACAAAGTTTTGTTCCTCCATCAAGTTAGGTAATTTTGGCAATGGTTTACTTGTTGATGGATTCAAAACAATACCTCAAACTCCCAAATCTTGCACACTCCCTTTTTGTCAAACTTCTGAAAGATGTTTGCGTACACTTCCTTCTTGTGTAGACAAAAACCTCATAATCAAGGCAAGCCAGAATTCTGATGCTTGTGTACACTTTCTTCTTGCGTAGACACAAAAGCCTCTAAATTAAGGCAAGCCAAAATTCTTCCCAAGTTTGGATAACTTTTCTCCTCTATCCATCAGATGCATGCCTGTGCTTTCCTCTTCTTATAGGGTAACGAAAAAGTAAAGAGATTTAGCTTGGAATATTGTTCATTGGTCATTCTATAATTAACTTGTCCACAAATTAGTGTGCATAAAATAATAAAAAATAGAGAAGTAGGAAGGATATACCTAAAGAACAAATTAAAGAATTTTTTTTCTCCGGTCTCATAGAACCTTTACCAAGTCACAACATTCATATACGGGGGTGGTTGTAAATGAGGAAGGAATGGGAACTTGAAACCGCCCACAACTTTGTAGGAAGGTCTGTGTATCTAAGGACTTCCTCAAATATATTTAAACAGCCTATCAACTTGGAAACAAGAACTAACTTCTTGATTCTCAAGTTTTCAATTGACTTTTCAAGGCTACAACTTTCTGGAATGTCTGGAGTCCAAAGGAGTTCACACCCAGAGACTCAAACATTAACATTCTACAACTAACTGCTTGATCCTCAAGTGTGGATGAATTGACACACAATTTAATAGCAATTGAAGACTTTTCCTTGGTAATCACAATTGCTATAAGAAATCGAAATTAGTTGCCATATGCTGTGGTATTAAGAATTATTTTAAAGCTAATTTCAACAAGTATACTTATTATCTCTAAGTAAAGATAGAAAACCTTACCTGAATGCCAAATATGAGGAGCGATTCCAACAAACTGCTTACTTCTGAGCACTTATTCATTGGGGTAGGGTAACAAAACTTGTATGAGAATATGCTCTTCTGCTTTTGCACCTTGCTCTGATTTTAGATGGAACAGCAAACAAAATCTCGAAACTAAGAATTTAAAAGTTATACAATGACATTTCTTCTTGCTTGCAGATTGAGGCAATGATAGAAAATGATGACTGTTGGACATACGACATGGATATGGCTATGGGCATGATCAACAGCCCGCCATTTAATTAGTGAAATGGCACAAACAAAACTATGGTTGTTGTTGTCCCACCAAATAAAATAAACCGAAGCTGCATAACTCTATGAAATCCTAACTCCTTCCTGACCTGCAGAAGCAAATATGCATAATATGTAACATATAAGTACGACAGTTGTAGCATTTTTCAGGTTCTATGCTAAATGAAACCATGCATCAAACACTTAATCGATGCTTCTTCTACTAAGCCTTATTGTTCTAACTTGGGAAAATTTTAGAGGAA

mRNA sequence

ATAAGCTTTTATTTTAATTCTACAAAGTAGCCTTTTCAATACTACCTAGGGCATGTGCACACAATTTGTAGTTCATGCGCTCAACTTTAAACGACTTGAATTGTTCTTTTATTCTTCCAAGTGCTTTAATGAATGTACGCCCTCACTTTCTAGTGCTCTTTCATGATTGTGATGCAGCTTACTGAATATTATTATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAACGACCTTCAAGGGACAAGTGAAAGTCTAATTGATAATGACGCAAAGGACCATGTATCTGATGAGACAATCTTGGTTTCACTCAAAAAGCTCCTACAAACTATTCAAAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATATAACTCAGATGGTGCAATTGGAGAATCAACTTGAAAGCACACTTGACAAAATCAAATCTCAAAGAATTGAGGCAATGATAGAAAATGATGACTGTTGGACATACGACATGGATATGGCTATGGGCATGATCAACAGCCCGCCATTTAATTAGTGAAATGGCACAAACAAAACTATGGTTGTTGTTGTCCCACCAAATAAAATAAACCGAAGCTGCATAACTCTATGAAATCCTAACTCCTTCCTGACCTGCAGAAGCAAATATGCATAATATGTAACATATAAGTACGACAGTTGTAGCATTTTTCAGGTTCTATGCTAAATGAAACCATGCATCAAACACTTAATCGATGCTTCTTCTACTAAGCCTTATTGTTCTAACTTGGGAAAATTTTAGAGGAA

Coding sequence (CDS)

ATGCGCTACCAAAGCCACCTTCAAGGGAGAAATGAAAGTCCAATTGACAACGACCTTCAAGGGACAAGTGAAAGTCTAATTGATAATGACGCAAAGGACCATGTATCTGATGAGACAATCTTGGTTTCACTCAAAAAGCTCCTACAAACTATTCAAAGTCAGGTTGAAGAACCAAATTTCAAGAAGCTCGATATAACTCAGATGGTGCAATTGGAGAATCAACTTGAAAGCACACTTGACAAAATCAAATCTCAAAGAATTGAGGCAATGATAGAAAATGATGACTGTTGGACATACGACATGGATATGGCTATGGGCATGATCAACAGCCCGCCATTTAATTAG

Protein sequence

MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN*

Homology

[Close]

BLAST of CSPI06G07830 vs. ExPASy TrEMBL
Match: A0A0A0KFD8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1)

HSP 1 Score: 224.6 bits (571), Expect = 2.2e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF 60
           MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF
Sbjct: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF 60

Query: 61  KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN 115
           KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN
Sbjct: 61  KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN 114

[Close]

BLAST of CSPI06G07830 vs. ExPASy TrEMBL
Match: A0A1S3CCC5 (MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=4 SV=1)

HSP 1 Score: 206.1 bits (523), Expect = 8.0e-50
Identity = 108/122 (88.52%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQ 60
           MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ
Sbjct: 68  MRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQLQTIQ 127

Query: 61  SQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPP 115
           SQVEEPNFKKLDITQMVQLENQLE TLDKIKSQRIEAMIENDDCWTYDM++AMGMINSPP
Sbjct: 128 SQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYDMEIAMGMINSPP 187

[Close]

BLAST of CSPI06G07830 vs. ExPASy TrEMBL
Match: A0A5A7T9V4 (MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold122G00860 PE=4 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 1.6e-29
Identity = 81/100 (81.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQ 60
           MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ
Sbjct: 32  MRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQLQTIQ 91

Query: 61  S------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR 87
                  QVEEPNFKKLDITQMVQLENQLE TLDKIKSQR
Sbjct: 92  RHLYLNYQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR 131

[Close]

BLAST of CSPI06G07830 vs. ExPASy TrEMBL
Match: A0A5D3DM40 (MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002370 PE=4 SV=1)

HSP 1 Score: 127.9 bits (320), Expect = 2.8e-26
Identity = 73/87 (83.91%), Postives = 76/87 (87.36%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETIL-VSLKKLLQTIQSQVEEPN 60
           MRYQSHLQGRNESPIDNDLQG SESLID+DAKDHVSDETIL VS + +L      VEEPN
Sbjct: 32  MRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETIL------VEEPN 91

Query: 61  FKKLDITQMVQLENQLESTLDKIKSQR 87
           FKKLDITQMVQLENQLE TLDKIKSQR
Sbjct: 92  FKKLDITQMVQLENQLEGTLDKIKSQR 112

[Close]

BLAST of CSPI06G07830 vs. ExPASy TrEMBL
Match: A0A6J1DPA0 (MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 GN=LOC111022564 PE=4 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 2.4e-22
Identity = 65/99 (65.66%), Postives = 80/99 (80.81%), Query Frame = 0


Query: 2   RYQSHLQGR--NESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPN 61
           RYQSHL+G+  ++SPID D   + +        DH S++TILVSL KLLQTIQSQVEEP+
Sbjct: 108 RYQSHLKGKSQSQSPIDIDTNASDQ--------DHQSNQTILVSLGKLLQTIQSQVEEPD 167

Query: 62  FKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWT 99
           FKKL++T+M+QLENQLE+TLDKIK QRIEAM+EN DCWT
Sbjct: 168 FKKLNVTEMMQLENQLEATLDKIKIQRIEAMMEN-DCWT 197

[Close]

BLAST of CSPI06G07830 vs. NCBI nr
Match: XP_011656809.1 (MADS-box transcription factor 8 [Cucumis sativus] >KAE8646765.1 hypothetical protein Csa_005710 [Cucumis sativus])

HSP 1 Score: 224.6 bits (571), Expect = 4.5e-55
Identity = 114/114 (100.00%), Postives = 114/114 (100.00%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF 60
           MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF
Sbjct: 68  MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNF 127

Query: 61  KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN 115
           KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN
Sbjct: 128 KKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN 181

[Close]

BLAST of CSPI06G07830 vs. NCBI nr
Match: XP_008459847.1 (PREDICTED: MADS-box transcription factor 8-like [Cucumis melo])

HSP 1 Score: 206.1 bits (523), Expect = 1.7e-49
Identity = 108/122 (88.52%), Postives = 111/122 (90.98%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQ 60
           MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ
Sbjct: 68  MRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQLQTIQ 127

Query: 61  SQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPP 115
           SQVEEPNFKKLDITQMVQLENQLE TLDKIKSQRIEAMIENDDCWTYDM++AMGMINSPP
Sbjct: 128 SQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQRIEAMIENDDCWTYDMEIAMGMINSPP 187

[Close]

BLAST of CSPI06G07830 vs. NCBI nr
Match: XP_038907043.1 (uncharacterized protein LOC120092871 [Benincasa hispida])

HSP 1 Score: 177.9 bits (450), Expect = 4.8e-41
Identity = 96/125 (76.80%), Postives = 105/125 (84.00%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDA-----------KDHVSDETILVSLKKLLQ 60
           MRYQSHLQGRNESPI N LQGTSESLIDNDA           KDH SDET LVSL KLL+
Sbjct: 1   MRYQSHLQGRNESPIHNALQGTSESLIDNDAKKVNEDLQYLVKDHESDETFLVSLGKLLK 60

Query: 61  TIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMIN 115
           TI SQVEEPNFKKLD++QM+QLENQLE TLDKIKSQRIEAM+E+D  WTY+MDMAMG++N
Sbjct: 61  TIHSQVEEPNFKKLDVSQMMQLENQLEGTLDKIKSQRIEAMLESDG-WTYNMDMAMGVLN 120

[Close]

BLAST of CSPI06G07830 vs. NCBI nr
Match: KAA0039813.1 (MADS-box transcription factor 8-like [Cucumis melo var. makuwa])

HSP 1 Score: 138.7 bits (348), Expect = 3.3e-29
Identity = 81/100 (81.00%), Postives = 82/100 (82.00%), Query Frame = 0


Query: 1   MRYQSHLQGRNESPIDNDLQGTSESLIDNDAKDH--------VSDETILVSLKKLLQTIQ 60
           MRYQSHLQGRNESPIDNDLQG SESLID+DAKDH        VSDETILVSLKK LQTIQ
Sbjct: 32  MRYQSHLQGRNESPIDNDLQGRSESLIDSDAKDHVSDETILDVSDETILVSLKKQLQTIQ 91

Query: 61  S------QVEEPNFKKLDITQMVQLENQLESTLDKIKSQR 87
                  QVEEPNFKKLDITQMVQLENQLE TLDKIKSQR
Sbjct: 92  RHLYLNYQVEEPNFKKLDITQMVQLENQLEGTLDKIKSQR 131

[Close]

BLAST of CSPI06G07830 vs. NCBI nr
Match: XP_023514717.1 (MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 136.7 bits (343), Expect = 1.2e-28
Identity = 75/113 (66.37%), Postives = 87/113 (76.99%), Query Frame = 0


Query: 2   RYQSHLQGRNESPIDNDLQGTSESLIDNDAKDHVSDETILVSLKKLLQTIQSQVEEPNFK 61
           RYQSHL+GRN            E+L+DND KDH SDETILVSL KLLQTIQSQV EPNFK
Sbjct: 69  RYQSHLEGRN------------ENLVDNDTKDHESDETILVSLGKLLQTIQSQVVEPNFK 128

Query: 62  KLDITQMVQLENQLESTLDKIKSQRIEAMIENDDCWTYDMDMAMGMINSPPFN 115
           KL+   ++QLENQL++TL KIK QRIEAM+E DDCWT  M+MA+GM+NS  FN
Sbjct: 129 KLNAIDLLQLENQLQATLHKIKYQRIEAMME-DDCWTDHMEMAIGMVNSQSFN 168

[Close]

BLAST of CSPI06G07830 vs. TAIR 10
Match: AT1G77080.2 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 19/48 (39.58%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 45  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE 93
           K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Sbjct: 90  KELLETVQSKLEEPNVDNVSVDSLISLEEQLETALSVSRARKAELMME 137

[Close]

BLAST of CSPI06G07830 vs. TAIR 10
Match: AT1G77080.4 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 19/48 (39.58%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 45  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE 93
           K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Sbjct: 94  KELLETVQSKLEEPNVDNVSVDSLISLEEQLETALSVSRARKAELMME 141

[Close]

BLAST of CSPI06G07830 vs. TAIR 10
Match: AT1G77080.5 (K-box region and MADS-box transcription factor family protein )

HSP 1 Score: 42.7 bits (99), Expect = 2.3e-04
Identity = 19/48 (39.58%), Postives = 34/48 (70.83%), Query Frame = 0


Query: 45  KKLLQTIQSQVEEPNFKKLDITQMVQLENQLESTLDKIKSQRIEAMIE 93
           K+LL+T+QS++EEPN   + +  ++ LE QLE+ L   ++++ E M+E
Sbjct: 94  KELLETVQSKLEEPNVDNVSVDSLISLEEQLETALSVSRARKAELMME 141

The following BLAST results are available for this feature:

BLAST of CSPI06G07830 vs.


Match Name	E-value	Identity	Description

BLAST of CSPI06G07830 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A0A0KFD8	2.2e-55	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G095280 PE=4 SV=1	[more]
A0A1S3CCC5	8.0e-50	88.52	MADS-box transcription factor 8-like OS=Cucumis melo OX=3656 GN=LOC103498847 PE=...	[more]
A0A5A7T9V4	1.6e-29	81.00	MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A5D3DM40	2.8e-26	83.91	MADS-box transcription factor 8-like OS=Cucumis melo var. makuwa OX=1194695 GN=E...	[more]
A0A6J1DPA0	2.4e-22	65.66	MADS-box transcription factor 8-like isoform X3 OS=Momordica charantia OX=3673 G...	[more]

BLAST of CSPI06G07830 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011656809.1	4.5e-55	100.00	MADS-box transcription factor 8 [Cucumis sativus] >KAE8646765.1 hypothetical pro...	[more]
XP_008459847.1	1.7e-49	88.52	PREDICTED: MADS-box transcription factor 8-like [Cucumis melo]	[more]
XP_038907043.1	4.8e-41	76.80	uncharacterized protein LOC120092871 [Benincasa hispida]	[more]
KAA0039813.1	3.3e-29	81.00	MADS-box transcription factor 8-like [Cucumis melo var. makuwa]	[more]
XP_023514717.1	1.2e-28	66.37	MADS-box protein EJ2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CSPI06G07830 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G77080.2	2.3e-04	39.58	K-box region and MADS-box transcription factor family protein	[more]
AT1G77080.4	2.3e-04	39.58	K-box region and MADS-box transcription factor family protein	[more]
AT1G77080.5	2.3e-04	39.58	K-box region and MADS-box transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 68..88
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..30
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..26

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CSPI06G07830.1	CSPI06G07830.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0045944	positive regulation of transcription by RNA polymerase II
cellular_component	GO:0005634	nucleus
molecular_function	GO:0046983	protein dimerization activity
molecular_function	GO:0000977	RNA polymerase II transcription regulatory region sequence-specific DNA binding