CSPI06G07480 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: five_prime_UTRCDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAGAGAGAGAGAGAGAGAGAGAGATTATGGAATTTTAAAATAAAGATGTGCACTTTTTTTGTGGTACCAAATACAAAATATGCAACAAAAACAAGAAGTAAAGATTGGTACACACAGCACAATACAACAATATAACACCACTATCCTCCTCTCCTCCCCTTTTATGGGCTCTATAAATTCTTCAAAACCCATCCTACCATTTTCCCATTCCCCTTTATTGCTCCATTCCCTCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATATATTTACATTTTCAAAAGATTCAATCTTTTTCTTCATTCTCCTTCACAATGCAAACCTTCCCTCCCCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTTTTTCTCCTCTCAAATTTGTTAGTCCCCGTAACATCCAACTCTGAAGGTACTTCAAAATTTCATCTTTATTCTTACCATCCACACTTTTCTTTTCTTTTCTTTTCTTTTTTTAACATTTGGATTAACACAGGGGATGCTCTTTATGCCTTGAGGAGATCAGTGAAGGATCCAAACAATGTCTTACAAAGTTGGGATCCAACTCTTGTTGATCCTTGTACTTGGTTCCATGTCACTTGTGACTCTGCTAACCATGTCACTCGCCTGTAAATACCTTCTTCCTTCTCAAGACTATGTATTATATTCAGTCTTGTGTGTTCGTTCCAACTCTTGTAATATATGTCTTTTCTTTTCGTGTAGTGATCTTGGAAATGCGAAGCTATCAGGTAACTTAGTTCCTGAGTTGGGGAATCTCGAACACCTTCAATATTTGTGAGTGATTATGTCTTGTCTACTTAACTATGTTGGAACTGTTAAATTTAATTTAGTGATGCTGTTTCAAGAATTGATTTGGTTTGATTTAAGAAAGAGTCAGCAACTTCAATTCCCAAGTCAATGAAACAACTATTTTAAAGGGATCATAATAACAATGAATGAATGAATGAATGTGAAATTTGGGACTTTTGGTGGGTTTTCTTTTTTCTTTTTTGTAAACTTAATTTATTGCAAACTTTAATGTTGGATTGGTTGTTGTAGGGAATTGTACATGAATGAATTAGTGGGTCCAATTCCAAAGGAGATCGGACGGTTGAAAAGCCTCATCAGTTTAGATCTCTACCACAACAACCTCACTGCCTCTATTCCTTCTTCTCTCAAAAACCTCCACAATCTCAACTTCCTGTCAGTCTTCTCTTTCTATTCTCTCAACTGTTCTAAATATATTCAATCACTTTTACGGTATCTACTAACCGAGTGTTAGGCACATTAAGTTTTTATATTACAGTCTATAAATTGTAATAGTTTGTGATTGCGGGTAGAAGTAAGGTTGTAGTTAATTATAGGTCATTCTTGCACAGTTTTTTTATAGAATAATGTGGCGTGTTGAATTTGGGTAGGTTAGAACATTTGGTGGCATATTAATTGATAAAATTTTGATTGATTAGACATGTAGTTGAAAATCTAGAAACCTATATTTTATTTTGTTATTTGTGGACCGTTTGTTTAAAATCTAACGGTTGGATCATGTGAAAGCACAGGAGACTGAATGGGAACAAGCTCAGTGGAAGAATACCGAGGCAACTCACCAAACTTGGCAACCTAAAAATCATGTGAGTACATTAAATTTTTCCACATTGTTTGTCTTTCATTCCTATCTTCATAATAGCTAGTGATGATCTAACAACTCCATCTTCACAGTGATGTATCGGATAACGATCTGTGTGGGACGATTCCGACATCAGGCTCCTTCTCCAAGTTCTCAGAAGAAAGGTGAACGATCAAGACTGATTTGTTTTTGCGATGATCTATTTTCGTTATAGATGTTTGGTTGATTTTTCGATTTATGCAGTTTCAAGAACAACCCAAGATTGGAAGGGCCAGAACTAATGGGATTTGTGAGATATGAAAATGGAGGAACCTGCTGATGTTTTGAACTTAATGTACCTTAGTTAAAGGGAGAAAGAGTTTTATGTATTTTGTAAAAATAGTATTTCTTAATATATATTGTAATGTAAACTATTGGGAGGTCGTTTTGGTTAGCTTGCTTTTAAATAATCCAGACAGATGTTGAAAAATATTCAAAACATTGCACAAATTCTAGCTAAAGAAAGAAAAAGAAGTATAATGAAACCATTCTCTGTTAGATAAGAACAAACCAACTTAACCATACCCAAAATATTTGAGCTCTATCAGATACAGAGCAGAACCCTATTAACCACTTATCATAGTCTATTATCTACCAAATGAATGTACAACTTGATTCATTGGGG GAGAGAGAGAGAGAGAGAGAGAGATTATGGAATTTTAAAATAAAGATGTGCACTTTTTTTGTGGTACCAAATACAAAATATGCAACAAAAACAAGAAGTAAAGATTGGTACACACAGCACAATACAACAATATAACACCACTATCCTCCTCTCCTCCCCTTTTATGGGCTCTATAAATTCTTCAAAACCCATCCTACCATTTTCCCATTCCCCTTTATTGCTCCATTCCCTCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATATATTTACATTTTCAAAAGATTCAATCTTTTTCTTCATTCTCCTTCACAATGCAAACCTTCCCTCCCCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTTTTTCTCCTCTCAAATTTGTTAGTCCCCGTAACATCCAACTCTGAAGGGGATGCTCTTTATGCCTTGAGGAGATCAGTGAAGGATCCAAACAATGTCTTACAAAGTTGGGATCCAACTCTTGTTGATCCTTGTACTTGGTTCCATGTCACTTGTGACTCTGCTAACCATGTCACTCGCCTTGATCTTGGAAATGCGAAGCTATCAGGTAACTTAGTTCCTGAGTTGGGGAATCTCGAACACCTTCAATATTTGGAATTGTACATGAATGAATTAGTGGGTCCAATTCCAAAGGAGATCGGACGGTTGAAAAGCCTCATCAGTTTAGATCTCTACCACAACAACCTCACTGCCTCTATTCCTTCTTCTCTCAAAAACCTCCACAATCTCAACTTCCTGAGACTGAATGGGAACAAGCTCAGTGGAAGAATACCGAGGCAACTCACCAAACTTGGCAACCTAAAAATCATTGATGTATCGGATAACGATCTGTGTGGGACGATTCCGACATCAGGCTCCTTCTCCAAGTTCTCAGAAGAAAGTTTCAAGAACAACCCAAGATTGGAAGGGCCAGAACTAATGGGATTTGTGAGATATGAAAATGGAGGAACCTGCTGATGTTTTGAACTTAATGTACCTTAGTTAAAGGGAGAAAGAGTTTTATGTATTTTGTAAAAATAGTATTTCTTAATATATATTGTAATGTAAACTATTGGGAGGTCGTTTTGGTTAGCTTGCTTTTAAATAATCCAGACAGATGTTGAAAAATATTCAAAACATTGCACAAATTCTAGCTAAAGAAAGAAAAAGAAGTATAATGAAACCATTCTCTGTTAGATAAGAACAAACCAACTTAACCATACCCAAAATATTTGAGCTCTATCAGATACAGAGCAGAACCCTATTAACCACTTATCATAGTCTATTATCTACCAAATGAATGTACAACTTGATTCATTGGGG ATGCAACAAAAACAAGAAGTAAAGATTGGTACACACAGCACAATACAACAATATAACACCACTATCCTCCTCTCCTCCCCTTTTATGGGCTCTATAAATTCTTCAAAACCCATCCTACCATTTTCCCATTCCCCTTTATTGCTCCATTCCCTCGTTTCTCTCTCTCTCTCTCTCTCTCTCTCTCAAATATATTTACATTTTCAAAAGATTCAATCTTTTTCTTCATTCTCCTTCACAATGCAAACCTTCCCTCCCCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCCTCTTTCTCTTTTTCTCCTCTCAAATTTGTTAGTCCCCGTAACATCCAACTCTGAAGGGGATGCTCTTTATGCCTTGAGGAGATCAGTGAAGGATCCAAACAATGTCTTACAAAGTTGGGATCCAACTCTTGTTGATCCTTGTACTTGGTTCCATGTCACTTGTGACTCTGCTAACCATGTCACTCGCCTTGATCTTGGAAATGCGAAGCTATCAGGTAACTTAGTTCCTGAGTTGGGGAATCTCGAACACCTTCAATATTTGGAATTGTACATGAATGAATTAGTGGGTCCAATTCCAAAGGAGATCGGACGGTTGAAAAGCCTCATCAGTTTAGATCTCTACCACAACAACCTCACTGCCTCTATTCCTTCTTCTCTCAAAAACCTCCACAATCTCAACTTCCTGAGACTGAATGGGAACAAGCTCAGTGGAAGAATACCGAGGCAACTCACCAAACTTGGCAACCTAAAAATCATTGATGTATCGGATAACGATCTGTGTGGGACGATTCCGACATCAGGCTCCTTCTCCAAGTTCTCAGAAGAAAGTTTCAAGAACAACCCAAGATTGGAAGGGCCAGAACTAATGGGATTTGTGAGATATGAAAATGGAGGAACCTGCTGA MQQKQEVKIGTHSTIQQYNTTILLSSPFMGSINSSKPILPFSHSPLLLHSLVSLSLSLSLSQIYLHFQKIQSFSSFSFTMQTFPPPPPPPLLLLLLPLSLFLLSNLLVPVTSNSEGDALYALRRSVKDPNNVLQSWDPTLVDPCTWFHVTCDSANHVTRLDLGNAKLSGNLVPELGNLEHLQYLELYMNELVGPIPKEIGRLKSLISLDLYHNNLTASIPSSLKNLHNLNFLRLNGNKLSGRIPRQLTKLGNLKIIDVSDNDLCGTIPTSGSFSKFSEESFKNNPRLEGPELMGFVRYENGGTC* Homology
BLAST of CSPI06G07480 vs. ExPASy Swiss-Prot
Match: Q6NQP4 (Leucine-rich repeat protein 2 OS=Arabidopsis thaliana OX=3702 GN=LRR2 PE=2 SV=1) HSP 1 Score: 276.6 bits (706), Expect = 3.5e-73 Identity = 135/209 (64.59%), Postives = 162/209 (77.51%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy Swiss-Prot
Match: Q9FPJ5 (Leucine-rich repeat protein 1 OS=Arabidopsis thaliana OX=3702 GN=LRR1 PE=1 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 5.9e-73 Identity = 133/209 (63.64%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy Swiss-Prot
Match: B8ABC2 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=LRR1 PE=3 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-70 Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy Swiss-Prot
Match: Q5VQP7 (Leucine-rich repeat protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=LRR1 PE=1 SV=1) HSP 1 Score: 268.1 bits (684), Expect = 1.2e-70 Identity = 125/188 (66.49%), Postives = 149/188 (79.26%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy Swiss-Prot
Match: B8BB68 (LRR receptor kinase BAK1 OS=Oryza sativa subsp. indica OX=39946 GN=BAK1 PE=2 SV=1) HSP 1 Score: 239.2 bits (609), Expect = 6.1e-62 Identity = 118/192 (61.46%), Postives = 146/192 (76.04%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy TrEMBL
Match: A0A0A0KC63 (LRRNT_2 domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G091970 PE=4 SV=1) HSP 1 Score: 590.5 bits (1521), Expect = 4.0e-165 Identity = 303/306 (99.02%), Postives = 303/306 (99.02%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy TrEMBL
Match: A0A5A7TEG1 (Somatic embryogenesis receptor kinase 2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G002050 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 9.1e-117 Identity = 214/225 (95.11%), Postives = 216/225 (96.00%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy TrEMBL
Match: A0A1S3CBC1 (somatic embryogenesis receptor kinase 2-like OS=Cucumis melo OX=3656 GN=LOC103498879 PE=4 SV=1) HSP 1 Score: 429.9 bits (1104), Expect = 9.1e-117 Identity = 214/225 (95.11%), Postives = 216/225 (96.00%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy TrEMBL
Match: A0A6J1GNQ7 (leucine-rich repeat protein 1-like OS=Cucurbita moschata OX=3662 GN=LOC111456085 PE=4 SV=1) HSP 1 Score: 406.0 bits (1042), Expect = 1.4e-109 Identity = 199/225 (88.44%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of CSPI06G07480 vs. ExPASy TrEMBL
Match: A0A6J1JUU3 (leucine-rich repeat protein 1-like OS=Cucurbita maxima OX=3661 GN=LOC111488057 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 3.1e-109 Identity = 199/225 (88.44%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of CSPI06G07480 vs. NCBI nr
Match: KGN46424.1 (hypothetical protein Csa_005760 [Cucumis sativus]) HSP 1 Score: 590.5 bits (1521), Expect = 8.3e-165 Identity = 303/306 (99.02%), Postives = 303/306 (99.02%), Query Frame = 0
BLAST of CSPI06G07480 vs. NCBI nr
Match: XP_004140552.3 (leucine-rich repeat protein 2 [Cucumis sativus]) HSP 1 Score: 538.1 bits (1385), Expect = 4.9e-149 Identity = 275/278 (98.92%), Postives = 275/278 (98.92%), Query Frame = 0
BLAST of CSPI06G07480 vs. NCBI nr
Match: XP_008459898.1 (PREDICTED: somatic embryogenesis receptor kinase 2-like [Cucumis melo] >KAA0039845.1 somatic embryogenesis receptor kinase 2-like [Cucumis melo var. makuwa] >TYK24655.1 somatic embryogenesis receptor kinase 2-like [Cucumis melo var. makuwa]) HSP 1 Score: 429.9 bits (1104), Expect = 1.9e-116 Identity = 214/225 (95.11%), Postives = 216/225 (96.00%), Query Frame = 0
BLAST of CSPI06G07480 vs. NCBI nr
Match: XP_038907048.1 (leucine-rich repeat protein 2-like [Benincasa hispida]) HSP 1 Score: 411.0 bits (1055), Expect = 9.0e-111 Identity = 201/216 (93.06%), Postives = 206/216 (95.37%), Query Frame = 0
BLAST of CSPI06G07480 vs. NCBI nr
Match: XP_022953593.1 (leucine-rich repeat protein 1-like [Cucurbita moschata]) HSP 1 Score: 406.0 bits (1042), Expect = 2.9e-109 Identity = 199/225 (88.44%), Postives = 208/225 (92.44%), Query Frame = 0
BLAST of CSPI06G07480 vs. TAIR 10
Match: AT3G43740.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 276.6 bits (706), Expect = 2.5e-74 Identity = 135/209 (64.59%), Postives = 162/209 (77.51%), Query Frame = 0
BLAST of CSPI06G07480 vs. TAIR 10
Match: AT5G21090.1 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 275.8 bits (704), Expect = 4.2e-74 Identity = 133/209 (63.64%), Postives = 163/209 (77.99%), Query Frame = 0
BLAST of CSPI06G07480 vs. TAIR 10
Match: AT3G43740.2 (Leucine-rich repeat (LRR) family protein ) HSP 1 Score: 260.8 bits (665), Expect = 1.4e-69 Identity = 135/239 (56.49%), Postives = 162/239 (67.78%), Query Frame = 0
BLAST of CSPI06G07480 vs. TAIR 10
Match: AT1G34210.1 (somatic embryogenesis receptor-like kinase 2 ) HSP 1 Score: 233.4 bits (594), Expect = 2.4e-61 Identity = 113/193 (58.55%), Postives = 144/193 (74.61%), Query Frame = 0
BLAST of CSPI06G07480 vs. TAIR 10
Match: AT1G71830.1 (somatic embryogenesis receptor-like kinase 1 ) HSP 1 Score: 226.5 bits (576), Expect = 2.9e-59 Identity = 114/199 (57.29%), Postives = 147/199 (73.87%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|