CSPI06G07310 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCTTCTCCGATTGTTTCTTCCCTCTCATCTGTGATGTGGTGGGGGAGTAGTTGACTTTTTTGAATCGAGGAGAAGGGAATAAATTAGAGAAATGGGGAGAGGGGGGAGATCCAAGAAGCCATGGCTTCCAAAGCGAAAATTTTCCTCATCCTTTTATTGCTGAGTGCGAGTGTAAGACTATTTCAGAGGATCCAGTTCCAACCCCATGGCCTCTTCAATTTCATTCCATTCTCCTCATGAACTACTCCGGGATTCCTCAGATAATCAACCTCTGGTACGACTGGCCTAATGGTCGGAACTTCAACATCATCCAACACCAGCTCGGCCACGTTCTCTACGACCTCGAATGGAACAATGGTACTTCCTTCTTCTACACCTTAGATTCCTCCAAGACTTGCTCTTCCGCTCAGCTTGAGGTTGGTATTCTCCGACCCAACTGGCTCGATGGAGCCAAATATCTGGGTCAACGCCATGTCGATGGCTTCCTTTGCAATGTGTGGGAGAAAGTTGATTTCATTTGGTATTATGAAGATGTTGAAACCAAGAGGCCTGTTCATTGGCTCTTCTACACTGGTAACATCTTTTCTTCTGTCTCTCTAGCTTTCTCATATGAAAATTCTAAAGAATTTTAATTAGAAACTCTTTCTTCCTAGTTCTCAATCACTAATACCCCAAATCAATTTGATTCCAATCCTAATGTTTGGGTTAGACACGGATTGCCATTATGGTCAATCACACTCGAATGTCGTTGACTTACAAAATTGCAAAATTAGAGCTTGATTGACTAATCTTGAAATAAGCACAAATGCCACAACTTTCATTGTTAAACTATCTAACAAGACTTTCAATATCCTTCCAAAGAAAATGGTAATGCCACATTATAGTCAATAAAAAGAGAAAAAAATACCTGTACCAATTACCGCCATGCTATTCAATTGGCAACAATCATATTGACACTTTCATTCTTAACTTCCTGACATTCACTATTCAATGGTGTTTTTCCTTTCCACAACTGTGCAGGAAGACAGGCTCATGTGATGACATTTGAAGTGGGTGCTGTGCTAGAGGATGAGAACTGGCAAGCCCCTGTTTACTGCTTTGATAGCACGGGAACTGCTGTCAATGATGTGGCTCTCCACCAGAATTTGCCTCTAATGGCTGATGTTAACAATAGGCTTCTCCACCAGAATTTCCCTGCCATTTGA ATGTCTTCTCCGATTGTTTCTTCCCTCTCATCTGTGATGTGGTGGGGGAGAGAAGGGAATAAATTAGAGAAATGGGGAGAGGGGGGAGATCCAAGAAGCCATGGCTTCCAAAGCGAAAATTTTCCTCATCCTTTTATTGCTGAGTGCGAGTGTAAGACTATTTCAGAGGATCCAGTTCCAACCCCATGGCCTCTTCAATTTCATTCCATTCTCCTCATGAACTACTCCGGGATTCCTCAGATAATCAACCTCTGGTACGACTGGCCTAATGGTCGGAACTTCAACATCATCCAACACCAGCTCGGCCACGTTCTCTACGACCTCGAATGGAACAATGGTACTTCCTTCTTCTACACCTTAGATTCCTCCAAGACTTGCTCTTCCGCTCAGCTTGAGGTTGGTATTCTCCGACCCAACTGGCTCGATGGAGCCAAATATCTGGGTCAACGCCATGTCGATGGCTTCCTTTGCAATGTGTGGGAGAAAGTTGATTTCATTTGGTATTATGAAGATGTTGAAACCAAGAGGCCTGTTCATTGGCTCTTCTACACTGGAAGACAGGCTCATGTGATGACATTTGAAGTGGGTGCTGTGCTAGAGGATGAGAACTGGCAAGCCCCTGTTTACTGCTTTGATAGCACGGGAACTGCTGTCAATGATGTGGCTCTCCACCAGAATTTGCCTCTAATGGCTGATGTTAACAATAGGCTTCTCCACCAGAATTTCCCTGCCATTTGA ATGTCTTCTCCGATTGTTTCTTCCCTCTCATCTGTGATGTGGTGGGGGAGAGAAGGGAATAAATTAGAGAAATGGGGAGAGGGGGGAGATCCAAGAAGCCATGGCTTCCAAAGCGAAAATTTTCCTCATCCTTTTATTGCTGAGTGCGAGTGTAAGACTATTTCAGAGGATCCAGTTCCAACCCCATGGCCTCTTCAATTTCATTCCATTCTCCTCATGAACTACTCCGGGATTCCTCAGATAATCAACCTCTGGTACGACTGGCCTAATGGTCGGAACTTCAACATCATCCAACACCAGCTCGGCCACGTTCTCTACGACCTCGAATGGAACAATGGTACTTCCTTCTTCTACACCTTAGATTCCTCCAAGACTTGCTCTTCCGCTCAGCTTGAGGTTGGTATTCTCCGACCCAACTGGCTCGATGGAGCCAAATATCTGGGTCAACGCCATGTCGATGGCTTCCTTTGCAATGTGTGGGAGAAAGTTGATTTCATTTGGTATTATGAAGATGTTGAAACCAAGAGGCCTGTTCATTGGCTCTTCTACACTGGAAGACAGGCTCATGTGATGACATTTGAAGTGGGTGCTGTGCTAGAGGATGAGAACTGGCAAGCCCCTGTTTACTGCTTTGATAGCACGGGAACTGCTGTCAATGATGTGGCTCTCCACCAGAATTTGCCTCTAATGGCTGATGTTAACAATAGGCTTCTCCACCAGAATTTCCCTGCCATTTGA MSSPIVSSLSSVMWWGREGNKLEKWGEGGDPRSHGFQSENFPHPFIAECECKTISEDPVPTPWPLQFHSILLMNYSGIPQIINLWYDWPNGRNFNIIQHQLGHVLYDLEWNNGTSFFYTLDSSKTCSSAQLEVGILRPNWLDGAKYLGQRHVDGFLCNVWEKVDFIWYYEDVETKRPVHWLFYTGRQAHVMTFEVGAVLEDENWQAPVYCFDSTGTAVNDVALHQNLPLMADVNNRLLHQNFPAI* Homology
BLAST of CSPI06G07310 vs. ExPASy Swiss-Prot
Match: Q67YC9 (Uncharacterized protein At4g14100 OS=Arabidopsis thaliana OX=3702 GN=At4g14100 PE=2 SV=1) HSP 1 Score: 298.1 bits (762), Expect = 9.0e-80 Identity = 126/158 (79.75%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of CSPI06G07310 vs. ExPASy TrEMBL
Match: A0A0A0KF68 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091300 PE=4 SV=1) HSP 1 Score: 424.5 bits (1090), Expect = 3.1e-115 Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of CSPI06G07310 vs. ExPASy TrEMBL
Match: A0A5A7T8W2 (Glycosyl transferase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G001860 PE=4 SV=1) HSP 1 Score: 415.2 bits (1066), Expect = 1.9e-112 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CSPI06G07310 vs. ExPASy TrEMBL
Match: A0A1S3CAT8 (uncharacterized protein At4g14100-like OS=Cucumis melo OX=3656 GN=LOC103498894 PE=4 SV=1) HSP 1 Score: 413.3 bits (1061), Expect = 7.1e-112 Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of CSPI06G07310 vs. ExPASy TrEMBL
Match: A0A0A0KDE7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G091310 PE=4 SV=1) HSP 1 Score: 408.7 bits (1049), Expect = 1.7e-110 Identity = 182/193 (94.30%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of CSPI06G07310 vs. ExPASy TrEMBL
Match: A0A1S3CCI7 (uncharacterized protein At4g14100-like OS=Cucumis melo OX=3656 GN=LOC103498893 PE=4 SV=1) HSP 1 Score: 406.8 bits (1044), Expect = 6.6e-110 Identity = 182/193 (94.30%), Postives = 186/193 (96.37%), Query Frame = 0
BLAST of CSPI06G07310 vs. NCBI nr
Match: XP_004140561.1 (uncharacterized protein At4g14100 [Cucumis sativus] >KGN46406.1 hypothetical protein Csa_005766 [Cucumis sativus]) HSP 1 Score: 424.5 bits (1090), Expect = 6.3e-115 Identity = 191/193 (98.96%), Postives = 193/193 (100.00%), Query Frame = 0
BLAST of CSPI06G07310 vs. NCBI nr
Match: KAA0039862.1 (glycosyl transferase [Cucumis melo var. makuwa] >TYK24639.1 glycosyl transferase [Cucumis melo var. makuwa]) HSP 1 Score: 415.2 bits (1066), Expect = 3.9e-112 Identity = 186/193 (96.37%), Postives = 190/193 (98.45%), Query Frame = 0
BLAST of CSPI06G07310 vs. NCBI nr
Match: XP_008459920.1 (PREDICTED: uncharacterized protein At4g14100-like [Cucumis melo]) HSP 1 Score: 413.3 bits (1061), Expect = 1.5e-111 Identity = 185/193 (95.85%), Postives = 189/193 (97.93%), Query Frame = 0
BLAST of CSPI06G07310 vs. NCBI nr
Match: XP_004140562.3 (uncharacterized protein At4g14100 [Cucumis sativus] >KAE8646753.1 hypothetical protein Csa_005388 [Cucumis sativus]) HSP 1 Score: 407.1 bits (1045), Expect = 1.0e-109 Identity = 181/193 (93.78%), Postives = 187/193 (96.89%), Query Frame = 0
BLAST of CSPI06G07310 vs. NCBI nr
Match: XP_008459919.1 (PREDICTED: uncharacterized protein At4g14100-like [Cucumis melo]) HSP 1 Score: 406.8 bits (1044), Expect = 1.4e-109 Identity = 182/193 (94.30%), Postives = 186/193 (96.37%), Query Frame = 0
BLAST of CSPI06G07310 vs. TAIR 10
Match: AT4G14100.1 (transferases, transferring glycosyl groups ) HSP 1 Score: 298.1 bits (762), Expect = 6.4e-81 Identity = 126/158 (79.75%), Postives = 143/158 (90.51%), Query Frame = 0
BLAST of CSPI06G07310 vs. TAIR 10
Match: AT3G23760.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: vacuole; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: transferases, transferring glycosyl groups (TAIR:AT4G14100.1); Has 108 Blast hits to 104 proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 90; Viruses - 0; Other Eukaryotes - 10 (source: NCBI BLink). ) HSP 1 Score: 287.0 bits (733), Expect = 1.5e-77 Identity = 121/156 (77.56%), Postives = 139/156 (89.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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