CSPI06G05900 (gene) Cucumber (PI 183967) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptidethree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGTAGTAATTTAGAAAAAAGATAGGATCGAAGGAAAAATAAATTATTTTGGAACTTTCAAGAATATACACGTGGAGCTCTCGCGGAAGTTAGACGTCGTATATAAAGCGGCAAGAACCTCAACGGCCATTTGAGAAAAACGTCGGTTTTTCTAGTTTCTTCTTCGCGGTTCCCCGTGTTCGCGGGTTTCTCATTCCCCATAGATCTTCAGGTAATTCCTATCTTCTCCTTCCTCATTTCTCATAGCAGTCTTTAATAGTGAAACTATTTTTTTTTATTTTTCTTATTCTGGTTTGGTGAATATGATTATTATTTATTGCTGAAAGCATCAAGAAGACTTATTACCATTTGAATGAGGTTTTGAGTTGATTGTTGTAGTTCTTGGCTTCTTCTATTTTTTTGTTATTGCTTTAAAGTTTTGTGTAATCTGGGAAAAATTGGTGGAATTCTCAGTCATGTGTATAGTCGTCTCACTCCGCTTTCTTCTTCGCATACTTGTACATAGCGCTGGATCCTATATGGATTGCCTCTGAATTCTTTTTCTTTGGACTGTTTTTCTTGTTGTAACGTCTCCAGATTACTGTTTTTCAGTTGAAATTAGCAGATAGTAGTATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGGTGGTTTCCCCGGGTTTGGTTTATTTGGATCACGTAGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACACGGCAGGAATGAGAATAATTCTAGGTCGGGGCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGGTAATTGAGCTTTGATTTGATGTCCATTATTTTCACAAACCACGTTAATGATTTCGATTTTACCATGCTTCGATTGTTTCATTGATTGACGTCCAGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAATAGTTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGATCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTAAGTCAAGTTCTTGTGGAATGACTGTAAACTTTGAATGAAGTATATGGTATTGATAGCAGGTCTTGTGAATCAGGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTGTAGAGGAATTCATGATAAGGTATGTATTGGAAATGGACTCTGACCTTTAATCGGAAATTCACCATTTGTCCTAGTCCTTGATTATCTTTTGGCTTGGCATTTAATGCATAAAACCTAGTAAACTCTAGGGACTTGTTCTGAAAATGTTTCCCCCTCCAAGTTTTCTGCTTGTTTGGTACAAGTTTCGAGTGGTTTTCCCTTGTCAGTCGTGTGAAACCATGTAGCTAATACGAAAAGCTGTTGGAAAATTGCCTTTTGTCATGTTTGTAATCTAATCGTTAAGATCTAGAGAGCACCGGTATTGTATTTTTCCAATTTTCATATGATGCAGTGTTTCGTACTCTCTGTTTTTTGTTTATTCTTTACGATATTTGCTTCTAATCTTTATTGCTTGAAGTATGACGAAGATATAGAAAGCTGGGGACTAAAACAGTTGCACTGGTTTTCAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGTCTGCTTTATCTATTCAACTATAATTAATAAAATCATCTTGGTTTCTTCATGTCGAAGCTGTTACATCATGTCTTGTCGTACCACTTTCTTACAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGGTAATTTGATTATCTAGGCCTCGCATAACTATTTGATTAGATTTCTTGTTTTTAAAAATGAAAGCCTATCCTTCATTGATTCATTGTCTACTTTCTTGGCCAAACTTTTTGAAAAACAAAAAATTAGCGTTGGAAATCTAAAAATTAGCTTTTGAACACTAAAAATTAGCTTTCAAAAACTTGTTTTTGTTTTTGGAATTTAGTTAAAAGAATACTTCATTTACCAGAAAGTTACATATTATAGCTGAAGCAATCTAAAAACAAAGAAAGAGATGGTTGTGTCAGGGTCTACATCTTCAGAAGCATCTTTCTATCCAACCCACTCTAACCTAACCACATTTTGAACACCATCTTTCATTGCCAATTGCCGTATCGTTGGTTCATAACCCTCTCAAATACACCAACTGATGTTCTGTCTGTAAATTGACTTCAAAATGGCACTTCAGTTTGCCCTTTGATGTTGGTGTTGAATTTTGATTTAACATTGACAATGCAGATTCCAGTGGCAGTAGGAACAGTGAGATTTCAAGTTGGGGTTTTCCATTTTTGGCTGAAAGGAGAATTGAAAACGATGGTGGAAGGGACAGTTCTAGTTCTTGTAGAACCAAAAAGGTAATCAGGATCAACATAGAATAGAAGGTGAATGACGACAAAGAGATATTGCATAGAGTTGAACGAAAGTAAATAAAAAATAATAGCATCTTTTCTCTTGAGGGGT ATGTACGGCAAGAACCTCAACGGCCATTTGAGAAAAACGTCGGTTTTTCTAGTTTCTTCTTCGCGGTTCCCCGTGTTCGCGGGTTTCTCATTCCCCATAGATCTTCAGTTGAAATTAGCAGATAGTAGTATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGGTGGTTTCCCCGGGTTTGGTTTATTTGGATCACGTAGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACACGGCAGGAATGAGAATAATTCTAGGTCGGGGCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAATAGTTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGATCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTGTAGAGGAATTCATGATAAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGATTCCAGTGGCAGTAGGAACAGTGAGATTTCAAGTTGGGGTTTTCCATTTTTGGCTGAAAGGAGAATTGAAAACGATGGTGGAAGGGACAGTTCTAGTTCTTGTAGAACCAAAAAGGTAATCAGGATCAACATAGAATAGAAGGTGAATGACGACAAAGAGATATTGCATAGAGTTGAACGAAAGTAAATAAAAAATAATAGCATCTTTTCTCTTGAGGGGT ATGTACGGCAAGAACCTCAACGGCCATTTGAGAAAAACGTCGGTTTTTCTAGTTTCTTCTTCGCGGTTCCCCGTGTTCGCGGGTTTCTCATTCCCCATAGATCTTCAGTTGAAATTAGCAGATAGTAGTATGGAGCAAAGGAGGGTAGCAGAAGGGAAGGACTCACTTTTCTCAGGCGACTTCATGGGTGGTTTCCCCGGGTTTGGTTTATTTGGATCACGTAGAGGTATGACACCTAACCTTTTTGGGGAGAGGGATCCATTTGATGATCCTTTTTTTACTCGCCCATTCGGTAGCATGTTCGAATCGAGTATATCCGGTTCCCATATTGCTGCTTACGATGAAGGGAAGAAAGATGGGGCACCGGAACTTGTGATTCAAGAAATATGCTCTGATGATGAGGAGAGGGAGGAAGATGATGACCTTAGGGATCAGAGACACGGCAGGAATGAGAATAATTCTAGGTCGGGGCAGGAGCCATCCGTTGAGCATCCTGATGATTCCAATGATGAGCGCCAGATAATGACTCAAAGAAGTAGTGAGAATAATAGTTTTAGAGTTCAGCCAAAGGCTGGTAAATCCAGTATCCATTCATGCAAGGTCACGTATGGGGGTGTAGATGGATCATACTACTCTTCGACCAGAACTAGAAGGGTTGACAATGAGGGAGTATTGCTTGAAGAGACGAAAGAAGCAGATAAGACAACAGGTCAGGCCACTCATAGGGTCTGTAGAGGAATTCATGATAAGGGTCATTCAGTTACGAGGAAACTGAACCCGGATGGCAAAGTGGACGTAGTTCAAACTCTGCATAATCTGGACGAAGGAGAGCTTCCTGGTTTTGAGCAAGCATGGAACGGCAATTTTCAAGGGCATAGACAGGTTCCAAATGCTGGATTCCATCACATGGATCCCAATTTTGATTCCAGTGGCAGTAGGAACAGTGAGATTTCAAGTTGGGGTTTTCCATTTTTGGCTGAAAGGAGAATTGAAAACGATGGTGGAAGGGACAGTTCTAGTTCTTGTAGAACCAAAAAGGTAATCAGGATCAACATAGAATAG MYGKNLNGHLRKTSVFLVSSSRFPVFAGFSFPIDLQLKLADSSMEQRRVAEGKDSLFSGDFMGGFPGFGLFGSRRGMTPNLFGERDPFDDPFFTRPFGSMFESSISGSHIAAYDEGKKDGAPELVIQEICSDDEEREEDDDLRDQRHGRNENNSRSGQEPSVEHPDDSNDERQIMTQRSSENNSFRVQPKAGKSSIHSCKVTYGGVDGSYYSSTRTRRVDNEGVLLEETKEADKTTGQATHRVCRGIHDKGHSVTRKLNPDGKVDVVQTLHNLDEGELPGFEQAWNGNFQGHRQVPNAGFHHMDPNFDSSGSRNSEISSWGFPFLAERRIENDGGRDSSSSCRTKKVIRINIE* Homology
BLAST of CSPI06G05900 vs. ExPASy TrEMBL
Match: A0A0A0KBL3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G077410 PE=3 SV=1) HSP 1 Score: 573.9 bits (1478), Expect = 4.5e-160 Identity = 298/341 (87.39%), Postives = 300/341 (87.98%), Query Frame = 0
BLAST of CSPI06G05900 vs. ExPASy TrEMBL
Match: A0A1S3CC93 (uncharacterized protein LOC103499022 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103499022 PE=3 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 3.0e-156 Identity = 280/310 (90.32%), Postives = 290/310 (93.55%), Query Frame = 0
BLAST of CSPI06G05900 vs. ExPASy TrEMBL
Match: A0A5A7TD14 (Myeloid leukemia factor 1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold266G00470 PE=3 SV=1) HSP 1 Score: 561.2 bits (1445), Expect = 3.0e-156 Identity = 280/310 (90.32%), Postives = 291/310 (93.87%), Query Frame = 0
BLAST of CSPI06G05900 vs. ExPASy TrEMBL
Match: A0A1S3CD29 (uncharacterized protein LOC103499022 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103499022 PE=3 SV=1) HSP 1 Score: 505.8 bits (1301), Expect = 1.5e-139 Identity = 261/310 (84.19%), Postives = 270/310 (87.10%), Query Frame = 0
BLAST of CSPI06G05900 vs. ExPASy TrEMBL
Match: A0A6J1KXU0 (uncharacterized protein LOC111499178 OS=Cucurbita maxima OX=3661 GN=LOC111499178 PE=3 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 8.9e-124 Identity = 235/311 (75.56%), Postives = 261/311 (83.92%), Query Frame = 0
BLAST of CSPI06G05900 vs. NCBI nr
Match: XP_008460115.1 (PREDICTED: uncharacterized protein LOC103499022 isoform X1 [Cucumis melo] >XP_016902462.1 PREDICTED: uncharacterized protein LOC103499022 isoform X1 [Cucumis melo]) HSP 1 Score: 561.2 bits (1445), Expect = 6.3e-156 Identity = 280/310 (90.32%), Postives = 290/310 (93.55%), Query Frame = 0
BLAST of CSPI06G05900 vs. NCBI nr
Match: KAA0039996.1 (myeloid leukemia factor 1 isoform X1 [Cucumis melo var. makuwa] >TYK24505.1 myeloid leukemia factor 1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 561.2 bits (1445), Expect = 6.3e-156 Identity = 280/310 (90.32%), Postives = 291/310 (93.87%), Query Frame = 0
BLAST of CSPI06G05900 vs. NCBI nr
Match: XP_011656700.1 (uncharacterized protein LOC101221550 [Cucumis sativus] >KGN46251.2 hypothetical protein Csa_005592 [Cucumis sativus]) HSP 1 Score: 515.8 bits (1327), Expect = 3.0e-142 Identity = 267/310 (86.13%), Postives = 269/310 (86.77%), Query Frame = 0
BLAST of CSPI06G05900 vs. NCBI nr
Match: XP_008460117.1 (PREDICTED: uncharacterized protein LOC103499022 isoform X2 [Cucumis melo]) HSP 1 Score: 505.8 bits (1301), Expect = 3.1e-139 Identity = 261/310 (84.19%), Postives = 270/310 (87.10%), Query Frame = 0
BLAST of CSPI06G05900 vs. NCBI nr
Match: KAG6574795.1 (hypothetical protein SDJN03_25434, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 465.3 bits (1196), Expect = 4.7e-127 Identity = 246/342 (71.93%), Postives = 281/342 (82.16%), Query Frame = 0
BLAST of CSPI06G05900 vs. TAIR 10
Match: AT2G45380.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: Calcium-binding EF-hand family protein (TAIR:AT4G34070.1); Has 171 Blast hits to 170 proteins in 31 species: Archae - 2; Bacteria - 0; Metazoa - 68; Fungi - 0; Plants - 94; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 221.1 bits (562), Expect = 1.4e-57 Identity = 153/326 (46.93%), Postives = 194/326 (59.51%), Query Frame = 0
BLAST of CSPI06G05900 vs. TAIR 10
Match: AT2G45380.2 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: inflorescence meristem, flower, cultured cell; EXPRESSED DURING: petal differentiation and expansion stage; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT4G22740.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). ) HSP 1 Score: 163.3 bits (412), Expect = 3.5e-40 Identity = 94/183 (51.37%), Postives = 116/183 (63.39%), Query Frame = 0
BLAST of CSPI06G05900 vs. TAIR 10
Match: AT4G22740.1 (glycine-rich protein ) HSP 1 Score: 162.5 bits (410), Expect = 6.0e-40 Identity = 113/289 (39.10%), Postives = 156/289 (53.98%), Query Frame = 0
BLAST of CSPI06G05900 vs. TAIR 10
Match: AT4G22740.2 (glycine-rich protein ) HSP 1 Score: 162.5 bits (410), Expect = 6.0e-40 Identity = 113/289 (39.10%), Postives = 156/289 (53.98%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Cucumber (PI 183967) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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